F418668

General Info

Members Datasets Scaffolds Average Seq Length
351 203 702 681

Family's Representative Sequence

Representative Sequence 3300026142|Ga0207698_10052498|Ga0207698_100524981
Length 744
Sequence MNRSIPCVRMRAGTSRGPFFLREWLPDGDEARDQALIGAIGASDPLQLDGVGGGSTLNSKVAIVSRSSRPECDVDYLFAQVGVGHRSVDTRPNCGNMLSGVAPFAIEQGLVPARNGTTLVRVHNVNTGSRIDVTVHTPGGRVTYEGDARIDGVAGTAAPILLNFLDAWGAVTGQVFPTGRRIDTIDGVEVTCIDAAMPLMIVRASDLGLTGREKPAALDANIGLLERLETLRLEAGRRMGLGDVSDSVVPKPVLVSAGDTDDSITSRYFTPRKCHASHAVTGAIGVASAFALPGTVASGVARAAGTHRLVVLHPAGQIDIEVELKGTGDTAAVDRAALLRTARKIMQGEMYLPDYVFSRPQPQAASTSRFPHKALTIIVPTRAGGGNDTMARIIAAKLGPLLGQEMLVDNRAGANGAIASEYVARATPDGHTLMFGYVGTHAMNPALQKLAYDPAADFEPVGLVGSSSTLMVAHPDAGIPQVQQLIERLKTTPRSLSYASAGDGTPPHFAAELFQLSSGTSMASTTCEGAAPAIAETVQGRSQIMFPSLFTAYPFIRAAQLWALAVAGSKRLAALPDVPTLSELGVTGVDVVQWYGLFAPAGTPAAVVSHLNQALNEVLADPDVVRRFESQGALVEPGSPDALALRMKSDLARWREVVRQAGIAPKEQRQFALDWRVADTGTHPTPTTSIFNRVVAIRIYCGSSPAGRSSHFIDNLSSSPFFFASSMMPFTLSRNESSPLATPM

Samples

Sample ID Description Type Environment
1 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
39 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
40 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
57 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
65 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
66 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
69 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
70 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300025290 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (version 2) Metagenome Rhizosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
116 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
117 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
118 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
119 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
120 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
121 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
122 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
123 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
124 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
125 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
126 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
127 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
128 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
129 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
130 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
131 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
132 3300042000 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z081617_5539 Metagenome Rhizosphere
133 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
134 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
135 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
136 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
137 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
138 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
139 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
140 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
141 3300042126 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 Metagenome Rhizosphere
142 3300042129 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_070516_95 Metagenome Rhizosphere
143 3300042130 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 Metagenome Rhizosphere
144 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
145 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
146 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
147 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
148 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
149 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
150 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
151 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
152 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
153 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
154 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
155 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
156 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
157 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
158 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
159 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
162 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
163 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
164 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
165 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
166 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
167 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
168 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
169 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
170 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
171 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
172 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
173 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
174 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
175 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
176 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
177 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
178 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
179 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
180 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
181 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
182 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
183 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
184 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
185 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
186 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
188 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
189 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
190 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
191 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
192 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
193 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
194 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
195 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
196 2585428058 Methylibium sp. CF468 Isolate Rhizosphere
197 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
198 2643221654 Rhizobacter sp. Root404 Isolate Unclassified
199 2643221672 Variovorax sp. Root434 Isolate Unclassified
200 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
201 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
202 2904456579 Variovorax sp. 2002 Isolate Unclassified
203 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.44
Metatranscriptomes 0.28
Isolates 2.28

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.41
Nodule 0
Rhizoplane 3.13
Rhizosphere 84.33
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207698_10052498 3300026142 Bacteria 3124
2 rootL2_10247552 3300003322 Bacteria 4372
3 Ga0070658_10007478 3300005327 Bacteria 8814
4 Ga0070676_10000378 3300005328 Bacteria 20674
5 Ga0070676_10001656 3300005328 Bacteria 11344
6 Ga0070676_10010396 3300005328 Bacteria 5048
7 Ga0070670_100027478 3300005331 Bacteria 4894
8 Ga0070670_100052100 3300005331 Bacteria 3515
9 Ga0070677_10001855 3300005333 Bacteria 6681
10 Ga0070677_10009884 3300005333 Bacteria 3249
11 Ga0070677_10015311 3300005333 Bacteria 2715
12 Ga0068869_100040521 3300005334 Bacteria 3331
13 Ga0070666_10002356 3300005335 Bacteria 11412
14 Ga0070666_10003358 3300005335 Bacteria 9707
15 Ga0070666_10015312 3300005335 Bacteria 4889
16 Ga0068868_100004021 3300005338 Bacteria 10266
17 Ga0068868_100006204 3300005338 Bacteria 8454
18 Ga0068868_100007249 3300005338 Bacteria 7885
19 Ga0070687_100003277 3300005343 Bacteria 6259
20 Ga0070669_100002821 3300005353 Bacteria 12552
21 Ga0070669_100071466 3300005353 Bacteria 2567
22 Ga0070675_100003763 3300005354 Bacteria 11518
23 Ga0070675_100005486 3300005354 Bacteria 9710
24 Ga0070675_100008803 3300005354 Bacteria 7840
25 Ga0070675_100033111 3300005354 Bacteria 4187
26 Ga0070671_100000534 3300005355 Bacteria 26702
27 Ga0070671_100001751 3300005355 Bacteria 16492
28 Ga0070671_100009290 3300005355 Bacteria 7897
29 Ga0070671_100025469 3300005355 Bacteria 4854
30 Ga0070671_100034237 3300005355 Bacteria 4205
31 Ga0070674_100003538 3300005356 Bacteria 8777
32 Ga0070674_100004579 3300005356 Bacteria 7896
33 Ga0070674_100010570 3300005356 Bacteria 5585
34 Ga0070674_100016462 3300005356 Bacteria 4635
35 Ga0070673_100003867 3300005364 Bacteria 9404
36 Ga0070673_100007495 3300005364 Bacteria 7205
37 Ga0070673_100017114 3300005364 Bacteria 5145
38 Ga0070673_100050301 3300005364 Bacteria 3258
39 Ga0070673_100067999 3300005364 Bacteria 2851
40 Ga0070667_100000608 3300005367 Bacteria 34969
41 Ga0070667_100010900 3300005367 Bacteria 7519
42 Ga0070667_100041406 3300005367 Bacteria 3865
43 Ga0070713_100000140 3300005436 Bacteria 47882
44 Ga0070663_100002263 3300005455 Bacteria 10786
45 Ga0070663_100028606 3300005455 Bacteria 3797
46 Ga0070678_100000398 3300005456 Bacteria 20455
47 Ga0070678_100008716 3300005456 Bacteria 6091
48 Ga0070678_100009895 3300005456 Bacteria 5796
49 Ga0070662_100021389 3300005457 Bacteria 4416
50 Ga0070662_100075117 3300005457 Bacteria 2502
51 Ga0068867_100000447 3300005459 Bacteria 27402
52 Ga0068867_100010793 3300005459 Bacteria 6444
53 Ga0068867_100018445 3300005459 Bacteria 4960
54 Ga0068867_100026579 3300005459 Bacteria 4157
55 Ga0070706_100007532 3300005467 Bacteria 10201
56 Ga0070707_100027706 3300005468 Bacteria 5389
57 Ga0070698_100100932 3300005471 Bacteria 2858
58 Ga0068853_100062941 3300005539 Bacteria 3212
59 Ga0070672_100004240 3300005543 Bacteria 9374
60 Ga0070672_100011724 3300005543 Bacteria 6123
61 Ga0070672_100043374 3300005543 Bacteria 3468
62 Ga0070672_100044949 3300005543 Bacteria 3413
63 Ga0070672_100076354 3300005543 Bacteria 2676
64 Ga0070665_100004618 3300005548 Bacteria 14398
65 Ga0068857_100069388 3300005577 Bacteria 3139
66 Ga0068852_100002662 3300005616 Bacteria 12347
67 Ga0068859_100042122 3300005617 Bacteria 4586
68 Ga0068864_100004758 3300005618 Bacteria 11122
69 Ga0068864_100009957 3300005618 Bacteria 7843
70 Ga0068864_100014600 3300005618 Bacteria 6524
71 Ga0068861_100034606 3300005719 Bacteria 3736
72 Ga0068851_10000647 3300005834 Bacteria 14831
73 Ga0068870_10004276 3300005840 Bacteria 6143
74 Ga0068863_100001931 3300005841 Bacteria 20577
75 Ga0068863_100012511 3300005841 Bacteria 8188
76 Ga0068863_100067113 3300005841 Bacteria 3393
77 Ga0068858_100013092 3300005842 Bacteria 7822
78 Ga0068858_100117498 3300005842 Bacteria 2486
79 Ga0068860_100011430 3300005843 Bacteria 8745
80 Ga0068860_100013623 3300005843 Bacteria 7970
81 Ga0068860_100021174 3300005843 Bacteria 6298
82 Ga0075365_10013886 3300006038 Bacteria 4831
83 Ga0075364_10005127 3300006051 Bacteria 7594
84 Ga0075362_10004529 3300006177 Bacteria 5008
85 Ga0075362_10017350 3300006177 Bacteria 2965
86 Ga0075367_10006462 3300006178 Bacteria 5925
87 Ga0075366_10005407 3300006195 Bacteria 6919
88 Ga0075366_10009340 3300006195 Bacteria 5473
89 Ga0097621_100002031 3300006237 Bacteria 13852
90 Ga0097621_100107724 3300006237 Bacteria 2352
91 Ga0075370_10000803 3300006353 Bacteria 12570
92 Ga0075370_10001263 3300006353 Bacteria 10772
93 Ga0075370_10006806 3300006353 Bacteria 5778
94 Ga0075370_10008924 3300006353 Bacteria 5181
95 Ga0075370_10023780 3300006353 Bacteria 3378
96 Ga0075430_100043459 3300006846 Bacteria 3798
97 Ga0075429_100000252 3300006880 Bacteria 36895
98 Ga0097620_100042122 3300006931 Bacteria 4586
99 Ga0105240_10012575 3300009093 Bacteria 11676
100 Ga0105240_10099292 3300009093 Bacteria 3543
101 Ga0105245_10029058 3300009098 Bacteria 4882
102 Ga0105243_10000702 3300009148 Bacteria 32284
103 Ga0105243_10079385 3300009148 Bacteria 2674
104 Ga0105248_10041700 3300009177 Bacteria 5146
105 Ga0105248_10058207 3300009177 Bacteria 4339
106 Ga0105237_10000823 3300009545 Bacteria 42469
107 Ga0105237_10049370 3300009545 Bacteria 4230
108 Ga0105238_10017213 3300009551 Bacteria 7342
109 Ga0105249_10073716 3300009553 Bacteria 3158
110 Ga0105249_10103161 3300009553 Bacteria 2686
111 Ga0105239_10010731 3300010375 Bacteria 10233
112 Ga0105239_10041961 3300010375 Bacteria 5013
113 Ga0105246_10053734 3300011119 Bacteria 2773
114 Ga0157373_10015084 3300013100 Bacteria 5652
115 Ga0157370_10001244 3300013104 Bacteria 31808
116 Ga0157374_10005406 3300013296 Bacteria 10728
117 Ga0157374_10056974 3300013296 Bacteria 3649
118 Ga0157374_10105603 3300013296 Bacteria 2705
119 Ga0157378_10000906 3300013297 Bacteria 27304
120 Ga0163162_10016272 3300013306 Bacteria 7272
121 Ga0163162_10026576 3300013306 Bacteria 5722
122 Ga0163162_10028368 3300013306 Bacteria 5538
123 Ga0163162_10093774 3300013306 Bacteria 3087
124 Ga0157372_10024963 3300013307 Bacteria 6496
125 Ga0157375_10003538 3300013308 Bacteria 13561
126 Ga0157380_10036870 3300014326 Bacteria 3786
127 Ga0157380_10068402 3300014326 Bacteria 2862
128 Ga0182008_10000821 3300014497 Bacteria 21644
129 Ga0182008_10009975 3300014497 Bacteria 5102
130 Ga0157377_10000027 3300014745 Bacteria 135472
131 Ga0157377_10012168 3300014745 Bacteria 4319
132 Ga0157376_10025274 3300014969 Bacteria 4676
133 Ga0157376_10094258 3300014969 Bacteria 2601
134 Ga0182006_1007745 3300015261 Bacteria 4902
135 Ga0182007_10006726 3300015262 Bacteria 4910
136 Ga0183362_10001 3300015683 Bacteria 2046624
137 Ga0163161_10005521 3300017792 Bacteria 8762
138 Ga0163161_10053388 3300017792 Bacteria 2931
139 Ga0207673_1000850 3300025290 Bacteria 3268
140 Ga0209025_1002169 3300025294 Bacteria 21834
141 Ga0207682_10003550 3300025893 Bacteria 6746
142 Ga0207688_10007525 3300025901 Bacteria 5924
143 Ga0207680_10017191 3300025903 Bacteria 3817
144 Ga0207645_10000826 3300025907 Bacteria 25958
145 Ga0207645_10005745 3300025907 Bacteria 8953
146 Ga0207645_10011003 3300025907 Bacteria 6191
147 Ga0207645_10021007 3300025907 Bacteria 4264
148 Ga0207643_10003681 3300025908 Bacteria 8254
149 Ga0207684_10005490 3300025910 Bacteria 11680
150 Ga0207695_10041594 3300025913 Bacteria 4918
151 Ga0207671_10004092 3300025914 Bacteria 14115
152 Ga0207662_10001175 3300025918 Bacteria 12439
153 Ga0207657_10005848 3300025919 Bacteria 12818
154 Ga0207694_10039064 3300025924 Bacteria 3651
155 Ga0207694_10056334 3300025924 Bacteria 3053
156 Ga0207650_10003059 3300025925 Bacteria 11524
157 Ga0207650_10003551 3300025925 Bacteria 10702
158 Ga0207650_10038390 3300025925 Bacteria 3496
159 Ga0207659_10001323 3300025926 Bacteria 14807
160 Ga0207659_10005705 3300025926 Bacteria 7579
161 Ga0207659_10013375 3300025926 Bacteria 5252
162 Ga0207659_10017363 3300025926 Bacteria 4700
163 Ga0207659_10072614 3300025926 Bacteria 2516
164 Ga0207687_10005992 3300025927 Bacteria 8043
165 Ga0207700_10000778 3300025928 Bacteria 18406
166 Ga0207644_10000360 3300025931 Bacteria 29659
167 Ga0207644_10004803 3300025931 Bacteria 8801
168 Ga0207644_10017374 3300025931 Bacteria 4856
169 Ga0207644_10038786 3300025931 Bacteria 3358
170 Ga0207706_10012395 3300025933 Bacteria 7766
171 Ga0207706_10042884 3300025933 Bacteria 4009
172 Ga0207706_10073860 3300025933 Bacteria 2999
173 Ga0207709_10000526 3300025935 Bacteria 33311
174 Ga0207709_10018300 3300025935 Bacteria 3922
175 Ga0207709_10050266 3300025935 Bacteria 2549
176 Ga0207670_10036302 3300025936 Bacteria 3204
177 Ga0207669_10000571 3300025937 Bacteria 16059
178 Ga0207669_10002368 3300025937 Bacteria 8018
179 Ga0207669_10013481 3300025937 Bacteria 4061
180 Ga0207704_10007994 3300025938 Bacteria 5030
181 Ga0207691_10003141 3300025940 Bacteria 16144
182 Ga0207691_10004497 3300025940 Bacteria 13499
183 Ga0207691_10014001 3300025940 Bacteria 7651
184 Ga0207711_10024344 3300025941 Bacteria 5071
185 Ga0207711_10085980 3300025941 Bacteria 2756
186 Ga0207689_10002401 3300025942 Bacteria 17436
187 Ga0207689_10019752 3300025942 Bacteria 5677
188 Ga0207689_10058965 3300025942 Bacteria 3157
189 Ga0207679_10096959 3300025945 Bacteria 2296
190 Ga0207651_10001433 3300025960 Bacteria 10856
191 Ga0207651_10002487 3300025960 Bacteria 8791
192 Ga0207651_10006294 3300025960 Bacteria 6192
193 Ga0207658_10000347 3300025986 Bacteria 45971
194 Ga0207658_10005521 3300025986 Bacteria 8666
195 Ga0207658_10008898 3300025986 Bacteria 6810
196 Ga0207658_10018668 3300025986 Bacteria 4794
197 Ga0207677_10005265 3300026023 Bacteria 7007
198 Ga0207677_10025988 3300026023 Bacteria 3663
199 Ga0207703_10003506 3300026035 Bacteria 13120
200 Ga0207703_10058097 3300026035 Bacteria 3156
201 Ga0207639_10008438 3300026041 Bacteria 7060
202 Ga0207678_10006093 3300026067 Bacteria 10728
203 Ga0207678_10006353 3300026067 Bacteria 10489
204 Ga0207678_10007628 3300026067 Bacteria 9559
205 Ga0207678_10008564 3300026067 Bacteria 9010
206 Ga0207708_10016903 3300026075 Bacteria 5493
207 Ga0207641_10006666 3300026088 Bacteria 9694
208 Ga0207648_10000119 3300026089 Bacteria 76875
209 Ga0207648_10055395 3300026089 Bacteria 3461
210 Ga0207676_10007619 3300026095 Bacteria 7687
211 Ga0207674_10017199 3300026116 Bacteria 7890
212 Ga0207675_100014556 3300026118 Bacteria 7333
213 Ga0207675_100029941 3300026118 Bacteria 5067
214 Ga0207683_10000463 3300026121 Bacteria 37729
215 Ga0207683_10019843 3300026121 Bacteria 5742
216 Ga0207683_10040790 3300026121 Bacteria 4053
217 Ga0207683_10070759 3300026121 Bacteria 3083
218 Ga0207683_10113310 3300026121 Bacteria 2429
219 Ga0207698_10089428 3300026142 Bacteria 2515
220 Ga0268266_10024893 3300028379 Bacteria 5092
221 Ga0268266_10071900 3300028379 Bacteria 2998
222 Ga0268264_10008551 3300028381 Bacteria 8509
223 Ga0268264_10010275 3300028381 Bacteria 7748
224 Ga0307515_10000658 3300028794 Bacteria 79766
225 Ga0307515_10018489 3300028794 Bacteria 12604
226 Ga0307515_10044771 3300028794 Bacteria 6822
227 Ga0265327_10019784 3300031251 Bacteria 4125
228 Ga0307408_100000200 3300031548 Bacteria 65177
229 Ga0307508_10053114 3300031616 Bacteria 3598
230 Ga0307516_10003691 3300031730 Bacteria 19465
231 Ga0307516_10054134 3300031730 Bacteria 3922
232 Ga0307405_10003877 3300031731 Bacteria 6975
233 Ga0307405_10005181 3300031731 Bacteria 6254
234 Ga0307405_10039976 3300031731 Bacteria 2838
235 Ga0307413_10006081 3300031824 Bacteria 5472
236 Ga0307406_10004975 3300031901 Bacteria 7241
237 Ga0307412_10014465 3300031911 Bacteria 4654
238 Ga0307412_10036070 3300031911 Bacteria 3164
239 Ga0307416_100070460 3300032002 Bacteria 2899
240 Ga0307414_10022149 3300032004 Bacteria 4002
241 Ga0373954_0046564 3300035118 Bacteria 2028
242 Ga0395905_0011481 3300037471 Bacteria 8560
243 Ga0439436_0000374 3300041404 Bacteria 11163
244 Ga0439436_0003976 3300041404 Bacteria 4532
245 Ga0439436_0004350 3300041404 Bacteria 4340
246 Ga0439439_0000021 3300041406 Bacteria 22666
247 Ga0439447_005662 3300041407 Bacteria 4136
248 Ga0439431_0000099 3300041997 Bacteria 14477
249 Ga0439431_0004314 3300041997 Bacteria 3124
250 Ga0439433_0000171 3300041999 Bacteria 10131
251 Ga0439437_000303 3300042000 Bacteria 4593
252 Ga0439445_0000122 3300042004 Bacteria 13320
253 Ga0439432_007308 3300042006 Bacteria 3918
254 Ga0439449_0000003 3300042007 Bacteria 94735
255 Ga0439449_0004071 3300042007 Bacteria 5659
256 Ga0439449_0030605 3300042007 Bacteria 2006
257 Ga0439452_001327 3300042010 Bacteria 10357
258 Ga0439462_0000090 3300042015 Bacteria 14033
259 Ga0439462_0002442 3300042015 Bacteria 4316
260 Ga0439462_0002999 3300042015 Bacteria 4008
261 Ga0450911_001652 3300042115 Bacteria 4943
262 Ga0450919_000220 3300042121 Bacteria 6343
263 Ga0450923_000508 3300042125 Bacteria 4319
264 Ga0450888_000953 3300042126 Bacteria 2746
265 Ga0450891_000240 3300042129 Bacteria 5551
266 Ga0450892_000320 3300042130 Bacteria 5657
267 Ga0450903_002197 3300042138 Bacteria 3485
268 Ga0450903_004902 3300042138 Bacteria 2258
269 Ga0450910_000676 3300042147 Bacteria 4080
270 Ga0450908_003419 3300042184 Bacteria 3081
271 Ga0450918_000061 3300042531 Bacteria 21919
272 Ga0450918_000214 3300042531 Bacteria 13184
273 Ga0451577_0016657 3300042876 Bacteria 6800
274 Ga0451577_0038090 3300042876 Bacteria 4325
275 Ga0466972_0000308 3300044658 Bacteria 28512
276 Ga0466972_0001833 3300044658 Bacteria 10400
277 Ga0453683_0011381 3300044673 Bacteria 5862
278 Ga0466965_0011648 3300044683 Bacteria 4124
279 Ga0466966_0003162 3300044684 Bacteria 10835
280 Ga0453684_0017188 3300044712 Bacteria 11235
281 Ga0453684_0198640 3300044712 Bacteria 2339
282 Ga0466968_0002150 3300044735 Bacteria 7186
283 Ga0466968_0021090 3300044735 Bacteria 2636
284 Ga0451576_0006640 3300045051 Bacteria 14132
285 Ga0451576_0112378 3300045051 Bacteria 2835
286 Ga0495592_0000021 3300046454 Bacteria 140462
287 Ga0495650_0005268 3300046471 Bacteria 8469
288 Ga0495650_0005368 3300046471 Bacteria 8351
289 Ga0495639_0001295 3300046475 Bacteria 11248
290 Ga0495585_0017261 3300046492 Bacteria 4173
291 Ga0495610_0002293 3300046512 Bacteria 16166
292 Ga0495616_0045484 3300046513 Bacteria 2221
293 Ga0495631_0003246 3300046518 Bacteria 8940
294 Ga0495597_0000157 3300046542 Bacteria 60125
295 Ga0495597_0004940 3300046542 Bacteria 7167
296 Ga0495597_0014459 3300046542 Bacteria 3758
297 Ga0495633_0001670 3300046558 Bacteria 16748
298 Ga0495656_0002758 3300046615 Bacteria 5876
299 Ga0495656_0006776 3300046615 Bacteria 4026
300 Ga0495625_0022250 3300046660 Bacteria 4864
301 Ga0495670_0001518 3300046691 Bacteria 11330
302 Ga0495649_0001920 3300046694 Bacteria 15144
303 Ga0495589_0000033 3300046794 Bacteria 162794
304 Ga0495636_0000270 3300047318 Bacteria 20561
305 Ga0495687_000153 3300047443 Bacteria 105215
306 Ga0495687_016737 3300047443 Bacteria 3679
307 Ga0495677_0000874 3300047445 Bacteria 12167
308 Ga0496100_0007015 3300048903 Bacteria 6180
309 Ga0496101_0000541 3300048904 Bacteria 23220
310 Ga0496102_0000852 3300048905 Bacteria 29264
311 Ga0496102_0070823 3300048905 Bacteria 3202
312 Ga0496104_0001216 3300048907 Bacteria 22167
313 Ga0496105_0003084 3300048908 Bacteria 12252
314 Ga0496109_0061321 3300048912 Bacteria 3438
315 Ga0496110_0010129 3300048913 Bacteria 7654
316 Ga0496111_0023896 3300048914 Bacteria 4296
317 Ga0496112_0009210 3300048915 Bacteria 8874
318 Ga0496112_0019983 3300048915 Bacteria 6339
319 Ga0496116_0048664 3300048919 Bacteria 2843
320 Ga0496121_0004559 3300048924 Bacteria 18505
321 Ga0496125_0007998 3300048928 Bacteria 11166
322 Ga0496125_0032713 3300048928 Bacteria 4615
323 Ga0496125_0081067 3300048928 Bacteria 2481
324 Ga0496125_0094752 3300048928 Bacteria 2223
325 Ga0501314_000669 3300049530 Bacteria 2210
326 Ga0501034_0000178 3300049571 Bacteria 118886
327 Ga0501198_000027 3300049649 Bacteria 65442
328 Ga0501222_000026 3300049662 Bacteria 63988
329 nmdc:mga03683_5717_c1 3300050489 Bacteria 4219
330 nmdc:mga03n38_19049_c1 3300050490 Bacteria 2719
331 nmdc:mga00v17_5102_c1 3300050491 Bacteria 6900
332 nmdc:mga0k408_4592_c1 3300050493 Bacteria 7325
333 nmdc:mga0k408_51110_c1 3300050493 Bacteria 2394
334 nmdc:mga0k408_986_c1 3300050493 Bacteria 15635
335 nmdc:mga07m45_1686_c2 3300050496 Bacteria 3082
336 nmdc:mga07m45_1731_c1 3300050496 Bacteria 10054
337 nmdc:mga07m45_1838_c1 3300050496 Bacteria 9802
338 nmdc:mga07m45_2909_c1 3300050496 Bacteria 8114
339 nmdc:mga07m45_3601_c1 3300050496 Bacteria 7481
340 nmdc:mga07m45_50501_c1 3300050496 Bacteria 2344
341 nmdc:mga07m45_9785_c1 3300050496 Bacteria 4987
342 nmdc:mga09592_1513_c1 3300050508 Bacteria 18722
343 nmdc:mga0qj67_37480_c1 3300050509 Bacteria 3798
344 2587732817 2585428058 Bacteria 6853932
345 2644245274 2643221644 Bacteria 6865017
346 2644301052 2643221654 Bacteria 5273570
347 2644401363 2643221672 Bacteria 6322190
348 2881101529 2881101125 Bacteria 4590519
349 2904450033 2904449895 Bacteria 6927402
350 2904457151 2904456579 Bacteria 6819253
351 2919708542 2919704043 Bacteria 5560311
352 Ga0207698_10052498
353 rootL2_10247552
354 Ga0070658_10007478
355 Ga0070676_10000378
356 Ga0070676_10001656
357 Ga0070676_10010396
358 Ga0070670_100027478
359 Ga0070670_100052100
360 Ga0070677_10001855
361 Ga0070677_10009884
362 Ga0070677_10015311
363 Ga0068869_100040521
364 Ga0070666_10002356
365 Ga0070666_10003358
366 Ga0070666_10015312
367 Ga0068868_100004021
368 Ga0068868_100006204
369 Ga0068868_100007249
370 Ga0070687_100003277
371 Ga0070669_100002821
372 Ga0070669_100071466
373 Ga0070675_100003763
374 Ga0070675_100005486
375 Ga0070675_100008803
376 Ga0070675_100033111
377 Ga0070671_100000534
378 Ga0070671_100001751
379 Ga0070671_100009290
380 Ga0070671_100025469
381 Ga0070671_100034237
382 Ga0070674_100003538
383 Ga0070674_100004579
384 Ga0070674_100010570
385 Ga0070674_100016462
386 Ga0070673_100003867
387 Ga0070673_100007495
388 Ga0070673_100017114
389 Ga0070673_100050301
390 Ga0070673_100067999
391 Ga0070667_100000608
392 Ga0070667_100010900
393 Ga0070667_100041406
394 Ga0070713_100000140
395 Ga0070663_100002263
396 Ga0070663_100028606
397 Ga0070678_100000398
398 Ga0070678_100008716
399 Ga0070678_100009895
400 Ga0070662_100021389
401 Ga0070662_100075117
402 Ga0068867_100000447
403 Ga0068867_100010793
404 Ga0068867_100018445
405 Ga0068867_100026579
406 Ga0070706_100007532
407 Ga0070707_100027706
408 Ga0070698_100100932
409 Ga0068853_100062941
410 Ga0070672_100004240
411 Ga0070672_100011724
412 Ga0070672_100043374
413 Ga0070672_100044949
414 Ga0070672_100076354
415 Ga0070665_100004618
416 Ga0068857_100069388
417 Ga0068852_100002662
418 Ga0068859_100042122
419 Ga0068864_100004758
420 Ga0068864_100009957
421 Ga0068864_100014600
422 Ga0068861_100034606
423 Ga0068851_10000647
424 Ga0068870_10004276
425 Ga0068863_100001931
426 Ga0068863_100012511
427 Ga0068863_100067113
428 Ga0068858_100013092
429 Ga0068858_100117498
430 Ga0068860_100011430
431 Ga0068860_100013623
432 Ga0068860_100021174
433 Ga0075365_10013886
434 Ga0075364_10005127
435 Ga0075362_10004529
436 Ga0075362_10017350
437 Ga0075367_10006462
438 Ga0075366_10005407
439 Ga0075366_10009340
440 Ga0097621_100002031
441 Ga0097621_100107724
442 Ga0075370_10000803
443 Ga0075370_10001263
444 Ga0075370_10006806
445 Ga0075370_10008924
446 Ga0075370_10023780
447 Ga0075430_100043459
448 Ga0075429_100000252
449 Ga0097620_100042122
450 Ga0105240_10012575
451 Ga0105240_10099292
452 Ga0105245_10029058
453 Ga0105243_10000702
454 Ga0105243_10079385
455 Ga0105248_10041700
456 Ga0105248_10058207
457 Ga0105237_10000823
458 Ga0105237_10049370
459 Ga0105238_10017213
460 Ga0105249_10073716
461 Ga0105249_10103161
462 Ga0105239_10010731
463 Ga0105239_10041961
464 Ga0105246_10053734
465 Ga0157373_10015084
466 Ga0157370_10001244
467 Ga0157374_10005406
468 Ga0157374_10056974
469 Ga0157374_10105603
470 Ga0157378_10000906
471 Ga0163162_10016272
472 Ga0163162_10026576
473 Ga0163162_10028368
474 Ga0163162_10093774
475 Ga0157372_10024963
476 Ga0157375_10003538
477 Ga0157380_10036870
478 Ga0157380_10068402
479 Ga0182008_10000821
480 Ga0182008_10009975
481 Ga0157377_10000027
482 Ga0157377_10012168
483 Ga0157376_10025274
484 Ga0157376_10094258
485 Ga0182006_1007745
486 Ga0182007_10006726
487 Ga0183362_10001
488 Ga0163161_10005521
489 Ga0163161_10053388
490 Ga0207673_1000850
491 Ga0209025_1002169
492 Ga0207682_10003550
493 Ga0207688_10007525
494 Ga0207680_10017191
495 Ga0207645_10000826
496 Ga0207645_10005745
497 Ga0207645_10011003
498 Ga0207645_10021007
499 Ga0207643_10003681
500 Ga0207684_10005490
501 Ga0207695_10041594
502 Ga0207671_10004092
503 Ga0207662_10001175
504 Ga0207657_10005848
505 Ga0207694_10039064
506 Ga0207694_10056334
507 Ga0207650_10003059
508 Ga0207650_10003551
509 Ga0207650_10038390
510 Ga0207659_10001323
511 Ga0207659_10005705
512 Ga0207659_10013375
513 Ga0207659_10017363
514 Ga0207659_10072614
515 Ga0207687_10005992
516 Ga0207700_10000778
517 Ga0207644_10000360
518 Ga0207644_10004803
519 Ga0207644_10017374
520 Ga0207644_10038786
521 Ga0207706_10012395
522 Ga0207706_10042884
523 Ga0207706_10073860
524 Ga0207709_10000526
525 Ga0207709_10018300
526 Ga0207709_10050266
527 Ga0207670_10036302
528 Ga0207669_10000571
529 Ga0207669_10002368
530 Ga0207669_10013481
531 Ga0207704_10007994
532 Ga0207691_10003141
533 Ga0207691_10004497
534 Ga0207691_10014001
535 Ga0207711_10024344
536 Ga0207711_10085980
537 Ga0207689_10002401
538 Ga0207689_10019752
539 Ga0207689_10058965
540 Ga0207679_10096959
541 Ga0207651_10001433
542 Ga0207651_10002487
543 Ga0207651_10006294
544 Ga0207658_10000347
545 Ga0207658_10005521
546 Ga0207658_10008898
547 Ga0207658_10018668
548 Ga0207677_10005265
549 Ga0207677_10025988
550 Ga0207703_10003506
551 Ga0207703_10058097
552 Ga0207639_10008438
553 Ga0207678_10006093
554 Ga0207678_10006353
555 Ga0207678_10007628
556 Ga0207678_10008564
557 Ga0207708_10016903
558 Ga0207641_10006666
559 Ga0207648_10000119
560 Ga0207648_10055395
561 Ga0207676_10007619
562 Ga0207674_10017199
563 Ga0207675_100014556
564 Ga0207675_100029941
565 Ga0207683_10000463
566 Ga0207683_10019843
567 Ga0207683_10040790
568 Ga0207683_10070759
569 Ga0207683_10113310
570 Ga0207698_10089428
571 Ga0268266_10024893
572 Ga0268266_10071900
573 Ga0268264_10008551
574 Ga0268264_10010275
575 Ga0307515_10000658
576 Ga0307515_10018489
577 Ga0307515_10044771
578 Ga0265327_10019784
579 Ga0307408_100000200
580 Ga0307508_10053114
581 Ga0307516_10003691
582 Ga0307516_10054134
583 Ga0307405_10003877
584 Ga0307405_10005181
585 Ga0307405_10039976
586 Ga0307413_10006081
587 Ga0307406_10004975
588 Ga0307412_10014465
589 Ga0307412_10036070
590 Ga0307416_100070460
591 Ga0307414_10022149
592 Ga0373954_0046564
593 Ga0395905_0011481
594 Ga0439436_0000374
595 Ga0439436_0003976
596 Ga0439436_0004350
597 Ga0439439_0000021
598 Ga0439447_005662
599 Ga0439431_0000099
600 Ga0439431_0004314
601 Ga0439433_0000171
602 Ga0439437_000303
603 Ga0439445_0000122
604 Ga0439432_007308
605 Ga0439449_0000003
606 Ga0439449_0004071
607 Ga0439449_0030605
608 Ga0439452_001327
609 Ga0439462_0000090
610 Ga0439462_0002442
611 Ga0439462_0002999
612 Ga0450911_001652
613 Ga0450919_000220
614 Ga0450923_000508
615 Ga0450888_000953
616 Ga0450891_000240
617 Ga0450892_000320
618 Ga0450903_002197
619 Ga0450903_004902
620 Ga0450910_000676
621 Ga0450908_003419
622 Ga0450918_000061
623 Ga0450918_000214
624 Ga0451577_0016657
625 Ga0451577_0038090
626 Ga0466972_0000308
627 Ga0466972_0001833
628 Ga0453683_0011381
629 Ga0466965_0011648
630 Ga0466966_0003162
631 Ga0453684_0017188
632 Ga0453684_0198640
633 Ga0466968_0002150
634 Ga0466968_0021090
635 Ga0451576_0006640
636 Ga0451576_0112378
637 Ga0495592_0000021
638 Ga0495650_0005268
639 Ga0495650_0005368
640 Ga0495639_0001295
641 Ga0495585_0017261
642 Ga0495610_0002293
643 Ga0495616_0045484
644 Ga0495631_0003246
645 Ga0495597_0000157
646 Ga0495597_0004940
647 Ga0495597_0014459
648 Ga0495633_0001670
649 Ga0495656_0002758
650 Ga0495656_0006776
651 Ga0495625_0022250
652 Ga0495670_0001518
653 Ga0495649_0001920
654 Ga0495589_0000033
655 Ga0495636_0000270
656 Ga0495687_000153
657 Ga0495687_016737
658 Ga0495677_0000874
659 Ga0496100_0007015
660 Ga0496101_0000541
661 Ga0496102_0000852
662 Ga0496102_0070823
663 Ga0496104_0001216
664 Ga0496105_0003084
665 Ga0496109_0061321
666 Ga0496110_0010129
667 Ga0496111_0023896
668 Ga0496112_0009210
669 Ga0496112_0019983
670 Ga0496116_0048664
671 Ga0496121_0004559
672 Ga0496125_0007998
673 Ga0496125_0032713
674 Ga0496125_0081067
675 Ga0496125_0094752
676 Ga0501314_000669
677 Ga0501034_0000178
678 Ga0501198_000027
679 Ga0501222_000026
680 nmdc:mga03683_5717_c1
681 nmdc:mga03n38_19049_c1
682 nmdc:mga00v17_5102_c1
683 nmdc:mga0k408_4592_c1
684 nmdc:mga0k408_51110_c1
685 nmdc:mga0k408_986_c1
686 nmdc:mga07m45_1686_c2
687 nmdc:mga07m45_1731_c1
688 nmdc:mga07m45_1838_c1
689 nmdc:mga07m45_2909_c1
690 nmdc:mga07m45_3601_c1
691 nmdc:mga07m45_50501_c1
692 nmdc:mga07m45_9785_c1
693 nmdc:mga09592_1513_c1
694 nmdc:mga0qj67_37480_c1
695 2587732817
696 2644245274
697 2644301052
698 2644401363
699 2881101529
700 2904450033
701 2904457151
702 2919708542

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04303

PrpF

PrpF protein

2

353

0.96

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

390

663

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hke-assembly1.cif.gz_A matc (rpa3494) from rhodopseudomonas palustris with bound malate 0.9596 369 657
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.9571 372 666
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.951 368 663
2f5x-assembly3.cif.gz_C structure of periplasmic binding protein bugd 0.9506 373 665
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9492 368 663
ID Description Score Start End Superfamily
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.935 467 587 3.40.190.10
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9306 467 590 3.40.190.10
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9236 467 590 3.40.190.10
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9144 369 665 3.40.190.150
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.913 467 587 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A520EAY2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9691 372 661
AF-C5TCY3-F1-model_v4 Extra-cytoplasmic solute receptor 0.9688 389 663
AF-A0A4Z0BRZ8-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein BugE 0.968 366 665
AF-A0A6B2QZB3-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9668 369 663
AF-A0A2G4JBU4-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9663 369 663 GO:0016020

Map