F418468

General Info

Members Datasets Scaffolds Average Seq Length
351 272 254 655

Family's Representative Sequence

Representative Sequence 3300001979|JGI24740J21852_10003714|JGI24740J21852_100037144
Length 712
Sequence MKEFLIGKLTLESLPHEWFTIGGSAFFGLLTVALIVLLTVTKRWKWLWKEWLTSVDPKKIGIMYFIVAGFMLIARGGLEALMMWLQQALGASDMPGALGAAHGYLSADHFQQIFTAHGNIMVFFVAMGFIFGLINYIVPLQIGARDLASPFLNTLGFWLYVAGVVMVNMFFFFGGQYAATGWLAVAPLSGTQFSPGVGMDYWIWSLQISGIGTTLGAINFIMTILKMRAPGMTLWKMPAFTWGSLCSMIMAVTVFPLLTATIFLIFFDRYFGTHFFTTTLGGDPMMYTNLIWMWGHPEVYILVLPAYGVFSEIVSTFSRKRLASPISNIIGMIGVALFALSVWLHHFFTMGAGADVNAFFGVMTMIIAIPTTVLVFTWIATMYKGRIRFTTPMLWFLGFIAVFTTGGITGVMLAVPPADFQFHNSLFLVAHFHSNVIGGVLFGVFAGISYWFPKLAGFRLNERIGKYAFWCWMIGFSLSFIPMYIVGLMGATRRLDTYDAATGWQPFYVLMLIGGIIIAVGVALQLVQIIASIIEKRRLRDVTGDPWDGRSLEWATASAPAPYNFTTIPRVTTRDAFWQMKQQGLAKPKYEDILMPKNTASGIYISIFAFLMGFGFVWHITWLAVVSIIGIIVCAITRTFNEHTEMTIPAAEVEKQEAVRLKRLQDEHDSAPGKPAAADMADDMGLREFIKIVAVWAWNVVRNRQWRTWQKR

Samples

Sample ID Description Type Environment
1 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
2 2563366752 Paenibacillus pini JCM 16418 Isolate Rhizosphere
3 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
4 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
5 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
6 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
7 2597490356 Azospirillum brasilense sp7 Isolate Unclassified
8 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
9 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
10 2643221609 Acidovorax sp. Root217 Isolate Unclassified
11 2643221611 Acidovorax sp. Root219 Isolate Unclassified
12 2643221731 Bacillus sp. Root147 Isolate Unclassified
13 2643221732 Bacillus sp. Root239 Isolate Unclassified
14 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
15 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
16 2738543012 Acidovorax sp. CF301 Isolate Unclassified
17 2738543017 Bacillus sp. OV186 Isolate Unclassified
18 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
19 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
20 2788500588 Lysinibacillus sp. YS11 Isolate Unclassified
21 2816332133 Acidovorax radicis 2721A Isolate Unclassified
22 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
23 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
24 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
25 2818991441 Niallia circulans 3243 Isolate Rhizosphere
26 2818991451 Lysinibacillus fusiformis 3193 Isolate Unclassified
27 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
28 2831864461 Roseateles noduli HZ7 Isolate Nodule
29 2842682962 Bacillus sp. R-72492 Isolate Unclassified
30 2842882022 Bacillus sp. R-71893 Isolate Unclassified
31 2846952575 Azospirillum brasilense sp7 Isolate Unclassified
32 2848858292 Azospirillum brasilense Az39 Isolate Unclassified
33 2849139964 Bacillus sp. R-71875 Isolate Unclassified
34 2857581216 Bacillus sp. R-71922 Isolate Unclassified
35 2857586860 Bacillus sp. R-71935 Isolate Unclassified
36 2857604169 Domibacillus sp. R-71921 Isolate Unclassified
37 2857609550 Domibacillus sp. R-71929 Isolate Unclassified
38 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
39 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
40 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
41 2885266251 Ralstonia sp. SET104 Isolate Nodule
42 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
43 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
44 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
45 2904606771 Lysinibacillus macroides 1284 Isolate Rhizosphere
46 2907202186 Paenibacillus sp. HJL G12 Isolate Unclassified
47 2916971899 Alkalihalobacillus miscanthi AK13 Isolate Rhizosphere
48 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
49 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
50 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
51 2919476304 Duganella sp. 3397 Isolate Unclassified
52 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
53 2919720352 Priestia megaterium 4340 Isolate Unclassified
54 2928093941 Priestia aryabhattai 1389 Isolate Rhizosphere
55 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
56 2929004312 Priestia megaterium 1104 Isolate Unclassified
57 2932422444 Comamonas sp. 4034 Isolate Rhizosphere
58 2936361878 Neobacillus endophyticus BRMEA1 Isolate Unclassified
59 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
60 2939593269 Lysinibacillus parviboronicapiens 736 Isolate Rhizosphere
61 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
62 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
63 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
64 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
65 2964375228 Anaerobacillus alkaliphilus B16-10 Isolate Rhizosphere
66 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
67 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
68 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
69 2977254563 Bacillus sp. SORGH_AS 510 Isolate Unclassified
70 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
71 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
72 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
73 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
74 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
75 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
76 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
77 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
78 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
79 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
80 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
81 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
82 3006984091 Lederbergia citrea FJAT-49754 Isolate Rhizosphere
83 3006988479 Bacillus sp. FJAT-49711 Isolate Rhizosphere
84 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
85 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
86 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
87 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
88 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
89 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
90 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
91 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
92 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
93 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
94 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
95 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
96 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
97 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
98 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
99 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
100 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
101 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
102 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
103 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
104 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
105 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
106 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
107 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
108 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
109 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
110 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
111 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
112 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
113 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
114 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
115 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
116 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
117 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
118 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
119 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
120 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
121 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
122 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
123 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
124 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
125 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
126 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
127 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
128 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
129 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
130 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
131 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
132 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
133 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
134 3300013874 Rhizosphere microbial communities from switchgrass harvested rhizosphere in Austin, TX, USA - RS_213 Metagenome Rhizosphere
135 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
136 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
137 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
138 3300015690 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_D05 Metagenome Rhizosphere
139 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
140 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
141 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
142 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
143 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
145 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
146 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
147 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
148 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
149 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
150 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
151 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
159 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
160 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
161 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
162 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
163 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
164 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
165 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
166 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
167 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
168 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
169 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
170 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
171 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
172 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
173 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
174 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
175 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
176 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
177 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
178 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
179 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
180 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
181 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
182 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
183 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
184 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
185 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
186 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
187 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
188 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
189 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
190 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
191 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
192 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
193 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
194 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
195 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
196 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
197 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
198 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
199 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
200 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
201 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
202 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
203 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
204 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
205 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
206 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
207 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
208 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
209 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
210 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
211 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
212 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
213 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
214 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
215 3300049129 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_B_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
216 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
217 3300049131 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_B_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
218 3300049161 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I2_A_0_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
219 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
220 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
221 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
222 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
223 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
224 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
225 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
226 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
227 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
228 3300049535 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
229 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
230 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
231 3300049538 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
232 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
233 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
234 3300049542 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
235 3300049543 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
236 3300049548 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
237 3300049549 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_A_5_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
238 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
239 3300049553 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
240 3300049554 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
241 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
242 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
243 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
244 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
245 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
246 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
247 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
248 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
249 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
250 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
251 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
252 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
253 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
254 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
255 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
256 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
257 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
258 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
259 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
260 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
261 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
262 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
263 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
264 3300053724 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 endosphere Metagenome Endosphere
265 8022893055 Bacillus aryabhattai AFS007213 Isolate Unclassified
266 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
267 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
268 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere
269 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
270 8055531788 Lysinibacillus pakistanensis LY1 Isolate Rhizosphere
271 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
272 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 60.4
Metatranscriptomes 11.97
Isolates 27.64

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.37
Nodule 1.14
Rhizoplane 4.84
Rhizosphere 52.99
Stem 0
Stem Tuber 0
Unclassified 21.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10003714 3300001979 Bacteria 6645
2 JGI24737J22298_10000004 3300001990 Bacteria 66533
3 JGI25157J39369_1000850 3300002741 Bacteria 15042
4 JGI25151J46595_10002433 3300003187 Bacteria 11210
5 JGI25151J46595_10004122 3300003187 Bacteria 7771
6 rootH1_10015116 3300003316 Bacteria 11780
7 rootL2_10024363 3300003322 Bacteria 9954
8 Ga0006562J51391_1001731 3300003578 Bacteria 5870
9 Ga0006562J51391_1002755 3300003578 Bacteria 4004
10 Ga0055538_1000556 3300003751 Bacteria 12887
11 Ga0055526_1006362 3300003771 Bacteria 6429
12 Ga0055528_1005903 3300003790 Bacteria 5618
13 Ga0055541_1000341 3300003841 Bacteria 14646
14 Ga0055543_1001100 3300004625 Bacteria 11684
15 Ga0065165_1000101 3300005262 Bacteria 141486
16 Ga0065704_10079586 3300005289 Bacteria 4123
17 Ga0070658_10000717 3300005327 Bacteria 28715
18 Ga0070658_10001773 3300005327 Bacteria 18166
19 Ga0070690_100001768 3300005330 Bacteria 11419
20 Ga0070666_10000333 3300005335 Bacteria 29797
21 Ga0070680_100015091 3300005336 Bacteria 6049
22 Ga0070660_100000777 3300005339 Bacteria 21179
23 Ga0070671_100002982 3300005355 Bacteria 13168
24 Ga0070674_100011284 3300005356 Bacteria 5435
25 Ga0070659_100001607 3300005366 Bacteria 16260
26 Ga0070659_100002149 3300005366 Bacteria 14045
27 Ga0070667_100007084 3300005367 Bacteria 9321
28 Ga0070681_10000759 3300005458 Bacteria 26785
29 Ga0070681_10046333 3300005458 Bacteria 4347
30 Ga0070679_100012264 3300005530 Bacteria 8189
31 Ga0070679_100020648 3300005530 Bacteria 6423
32 Ga0070679_100148777 3300005530 Bacteria 2319
33 Ga0070684_100060651 3300005535 Bacteria 3309
34 Ga0068855_100000184 3300005563 Bacteria 80265
35 Ga0068855_100002255 3300005563 Bacteria 23808
36 Ga0068855_100028367 3300005563 Bacteria 6696
37 Ga0068857_100000007 3300005577 Bacteria 152197
38 Ga0068859_100025395 3300005617 Bacteria 5943
39 Ga0075365_10000125 3300006038 Bacteria 23243
40 Ga0075365_10002079 3300006038 Bacteria 9561
41 Ga0075365_10013992 3300006038 Bacteria 4817
42 Ga0075368_10000235 3300006042 Bacteria 15544
43 Ga0075364_10000171 3300006051 Bacteria 28988
44 Ga0075364_10002154 3300006051 Bacteria 11036
45 Ga0075364_10067624 3300006051 Bacteria 2349
46 Ga0075367_10000864 3300006178 Bacteria 12121
47 Ga0075369_10000009 3300006186 Bacteria 79582
48 Ga0075369_10000572 3300006186 Bacteria 11636
49 Ga0075366_10000273 3300006195 Bacteria 22952
50 Ga0075370_10006477 3300006353 Bacteria 5893
51 Ga0075370_10022171 3300006353 Bacteria 3485
52 Ga0075428_100001206 3300006844 Bacteria 27625
53 Ga0075430_100013108 3300006846 Bacteria 7065
54 Ga0097620_100025395 3300006931 Bacteria 5943
55 Ga0079104_1000007 3300006946 Bacteria 390531
56 Ga0105244_10026884 3300009036 Bacteria 3109
57 Ga0105250_10015903 3300009092 Bacteria 3073
58 Ga0105240_10097122 3300009093 Bacteria 3590
59 Ga0105247_10031181 3300009101 Bacteria 3235
60 Ga0105242_10003385 3300009176 Bacteria 12417
61 Ga0105242_10031042 3300009176 Bacteria 4266
62 Ga0105248_10146874 3300009177 Unclassified 2661
63 Ga0105238_10068656 3300009551 Bacteria 3545
64 Ga0105030_100851 3300009987 Bacteria 2727
65 Ga0157371_10015428 3300013102 Bacteria 5730
66 Ga0157374_10032967 3300013296 Bacteria 4722
67 Ga0157514_107179 3300013874 Bacteria 2280
68 Ga0163163_10000670 3300014325 Bacteria 29312
69 Ga0163163_10013005 3300014325 Bacteria 7601
70 Ga0157377_10016328 3300014745 Bacteria 3817
71 Ga0182006_1000747 3300015261 Bacteria 22238
72 Ga0183363_1008 3300015690 Bacteria 194027
73 Ga0213872_10000001 3300021361 Bacteria 662532
74 Ga0209784_100054 3300025224 Bacteria 178541
75 Ga0209784_100077 3300025224 Bacteria 139569
76 Ga0209566_100381 3300025225 Bacteria 36138
77 Ga0209147_100310 3300025229 Bacteria 38075
78 Ga0209258_101763 3300025242 Bacteria 6658
79 Ga0209673_1006704 3300025273 Bacteria 5494
80 Ga0209676_1000128 3300025292 Bacteria 188099
81 Ga0209676_1000494 3300025292 Bacteria 63484
82 Ga0209676_1000611 3300025292 Bacteria 52273
83 Ga0209025_1000017 3300025294 Bacteria 768983
84 Ga0209025_1000218 3300025294 Bacteria 137784
85 Ga0209025_1000223 3300025294 Bacteria 133474
86 Ga0209025_1011518 3300025294 Bacteria 5811
87 Ga0209025_1012417 3300025294 Bacteria 5459
88 Ga0209564_1000105 3300025295 Bacteria 218124
89 Ga0209564_1000383 3300025295 Bacteria 81061
90 Ga0209050_1002935 3300025298 Bacteria 13344
91 Ga0209051_1000960 3300025303 Bacteria 28324
92 Ga0209051_1004424 3300025303 Bacteria 8666
93 Ga0209257_1000140 3300025304 Bacteria 201515
94 Ga0207696_1003070 3300025711 Bacteria 7788
95 Ga0207655_1006080 3300025728 Bacteria 8057
96 Ga0207713_1005897 3300025735 Bacteria 7564
97 Ga0207647_10000004 3300025904 Bacteria 307217
98 Ga0207705_10000280 3300025909 Bacteria 48562
99 Ga0207705_10001088 3300025909 Bacteria 22101
100 Ga0207705_10032433 3300025909 Bacteria 3733
101 Ga0207657_10049258 3300025919 Bacteria 3673
102 Ga0207652_10035053 3300025921 Bacteria 4234
103 Ga0207652_10043594 3300025921 Bacteria 3820
104 Ga0207652_10048342 3300025921 Bacteria 3636
105 Ga0207667_10000268 3300025949 Bacteria 72064
106 Ga0207667_10122151 3300025949 Bacteria 2684
107 Ga0207703_10029465 3300026035 Bacteria 4331
108 Ga0207641_10007282 3300026088 Bacteria 9218
109 Ga0207674_10000001 3300026116 Bacteria 616581
110 Ga0265338_10000840 3300028800 Bacteria 51737
111 Ga0265338_10001149 3300028800 Bacteria 43743
112 Ga0265338_10002903 3300028800 Bacteria 24938
113 Ga0265338_10050149 3300028800 Bacteria 3776
114 Ga0265338_10081087 3300028800 Bacteria 2723
115 Ga0265324_10002943 3300029957 Bacteria 8339
116 Ga0316182_1183927 3300030745 Bacteria 8508
117 Ga0265340_10000723 3300031247 Bacteria 18732
118 Ga0265340_10011352 3300031247 Bacteria 4735
119 Ga0265339_10019604 3300031249 Bacteria 3968
120 Ga0265327_10006548 3300031251 Bacteria 9267
121 Ga0265342_10000624 3300031712 Bacteria 37174
122 Ga0307516_10010407 3300031730 Bacteria 10227
123 Ga0316577_10050658 3300031733 Bacteria 2318
124 Ga0373927_0000106 3300035695 Bacteria 63236
125 Ga0316584_0008154 3300036712 Bacteria 7201
126 Ga0395900_0018903 3300037418 Bacteria 7028
127 Ga0395905_0002366 3300037471 Bacteria 21007
128 Ga0436361_0404657 3300039447 Bacteria 144351
129 Ga0439461_0000205 3300041410 Bacteria 8299
130 Ga0466967_0024353 3300045976 Bacteria 4975
131 Ga0495580_0003111 3300046472 Bacteria 14211
132 Ga0495584_0025651 3300046491 Bacteria 2988
133 Ga0495585_0012061 3300046492 Bacteria 5100
134 Ga0495594_0002832 3300046499 Bacteria 9020
135 Ga0495583_0007474 3300046506 Bacteria 6854
136 Ga0495637_0025060 3300046520 Bacteria 2693
137 Ga0495666_0015496 3300046526 Bacteria 3795
138 Ga0495597_0001605 3300046542 Bacteria 15862
139 Ga0495622_0018934 3300046557 Bacteria 3208
140 Ga0495633_0004617 3300046558 Bacteria 8673
141 Ga0495661_0044969 3300046665 Bacteria 2703
142 Ga0495589_0013291 3300046794 Bacteria 4249
143 Ga0495660_0014982 3300046810 Bacteria 4482
144 Ga0495660_0024377 3300046810 Bacteria 3447
145 Ga0495602_0020013 3300048088 Bacteria 6624
146 Ga0496102_0016616 3300048905 Bacteria 6433
147 Ga0496103_0015446 3300048906 Bacteria 4543
148 Ga0496104_0003544 3300048907 Bacteria 13461
149 Ga0496105_0000134 3300048908 Bacteria 49734
150 Ga0496106_0000391 3300048909 Bacteria 31238
151 Ga0496107_0001079 3300048910 Bacteria 16382
152 Ga0496108_0001034 3300048911 Bacteria 21691
153 Ga0496109_0000541 3300048912 Bacteria 31953
154 Ga0496110_0002018 3300048913 Bacteria 15116
155 Ga0496110_0005997 3300048913 Bacteria 9564
156 Ga0496110_0009736 3300048913 Bacteria 7784
157 Ga0496110_0106691 3300048913 Bacteria 2514
158 Ga0496111_0008813 3300048914 Bacteria 6701
159 Ga0496111_0010732 3300048914 Bacteria 6161
160 Ga0496111_0041008 3300048914 Bacteria 3321
161 Ga0496113_0079288 3300048916 Bacteria 2513
162 Ga0496116_0002986 3300048919 Bacteria 17192
163 Ga0496116_0020305 3300048919 Bacteria 5049
164 Ga0496117_0011351 3300048920 Bacteria 7985
165 Ga0496118_0055214 3300048921 Bacteria 3000
166 Ga0496119_0000912 3300048922 Bacteria 38282
167 Ga0496120_0001061 3300048923 Bacteria 36334
168 Ga0496121_0000761 3300048924 Bacteria 59223
169 Ga0496121_0109945 3300048924 Bacteria 2104
170 Ga0496122_0006044 3300048925 Bacteria 14116
171 Ga0496122_0026853 3300048925 Bacteria 4946
172 Ga0496122_0065777 3300048925 Bacteria 2626
173 Ga0496123_0024424 3300048926 Bacteria 4594
174 Ga0496124_0000662 3300048927 Bacteria 56758
175 Ga0496124_0010444 3300048927 Bacteria 9397
176 Ga0496125_0000352 3300048928 Bacteria 87143
177 Ga0496125_0014353 3300048928 Bacteria 7718
178 Ga0496125_0060996 3300048928 Bacteria 3027
179 Ga0496126_0002225 3300048929 Bacteria 26823
180 Ga0496126_0025094 3300048929 Bacteria 5742
181 Ga0496126_0025822 3300048929 Bacteria 5643
182 Ga0496126_0095752 3300048929 Bacteria 2603
183 Ga0501306_000193 3300049127 Bacteria 4076
184 Ga0501306_000208 3300049127 Bacteria 3962
185 Ga0501309_000204 3300049129 Bacteria 4073
186 Ga0501309_000254 3300049129 Bacteria 3843
187 Ga0501310_000367 3300049130 Bacteria 4076
188 Ga0501341_00116 3300049131 Bacteria 2510
189 Ga0501305_000209 3300049161 Bacteria 4164
190 Ga0501305_003437 3300049161 Bacteria 1793
191 Ga0501307_000088 3300049162 Bacteria 4073
192 Ga0501307_000243 3300049162 Bacteria 3259
193 Ga0501311_000109 3300049527 Bacteria 4086
194 Ga0501312_000201 3300049528 Bacteria 4084
195 Ga0501312_000678 3300049528 Bacteria 2906
196 Ga0501313_000112 3300049529 Bacteria 4048
197 Ga0501313_000363 3300049529 Bacteria 2970
198 Ga0501314_000091 3300049530 Bacteria 4075
199 Ga0501315_000137 3300049531 Bacteria 4083
200 Ga0501315_000466 3300049531 Bacteria 2808
201 Ga0501316_000120 3300049532 Bacteria 4073
202 Ga0501316_001186 3300049532 Bacteria 2136
203 Ga0501317_000129 3300049533 Bacteria 4096
204 Ga0501318_000072 3300049534 Bacteria 4271
205 Ga0501318_000222 3300049534 Bacteria 3123
206 Ga0501319_000038 3300049535 Bacteria 4139
207 Ga0501319_000039 3300049535 Bacteria 4072
208 Ga0501320_000086 3300049536 Bacteria 4082
209 Ga0501321_000103 3300049537 Bacteria 4083
210 Ga0501321_000326 3300049537 Bacteria 2892
211 Ga0501322_000058 3300049538 Bacteria 4083
212 Ga0501323_000136 3300049539 Bacteria 4250
213 Ga0501323_000139 3300049539 Bacteria 4236
214 Ga0501324_000047 3300049540 Bacteria 4066
215 Ga0501324_000106 3300049540 Bacteria 3306
216 Ga0501326_00039 3300049542 Bacteria 4081
217 Ga0501327_00049 3300049543 Bacteria 3603
218 Ga0501332_00027 3300049548 Bacteria 4066
219 Ga0501333_000218 3300049549 Bacteria 2358
220 Ga0501335_000319 3300049551 Bacteria 2883
221 Ga0501337_000075 3300049553 Bacteria 3530
222 Ga0501338_00047 3300049554 Bacteria 3599
223 Ga0501034_0007867 3300049571 Bacteria 11331
224 Ga0501217_002152 3300049661 Bacteria 3822
225 Ga0501080_0002005 3300049742 Bacteria 17584
226 Ga0501262_000152 3300049759 Bacteria 8580
227 nmdc:mga00v17_19635_c1 3300050491 Bacteria 3862
228 nmdc:mga00v17_2052_c1 3300050491 Bacteria 10377
229 nmdc:mga00v17_28722_c1 3300050491 Bacteria 3259
230 nmdc:mga0yw44_2_c1 3300050492 Bacteria 586884
231 nmdc:mga0yw44_4_c1 3300050492 Bacteria 450247
232 nmdc:mga0k408_102_c1 3300050493 Bacteria 41013
233 nmdc:mga0k408_8821_c1 3300050493 Bacteria 5427
234 nmdc:mga06z11_304_c1 3300050494 Bacteria 18803
235 nmdc:mga04h51_302_c1 3300050495 Bacteria 12593
236 nmdc:mga0qj67_10242_c1 3300050509 Bacteria 7000
237 nmdc:mga0sz30_1_c1 3300050516 Bacteria 796501
238 nmdc:mga0sz30_984_c1 3300050516 Bacteria 10242
239 Ga0500643_000011 3300053087 Bacteria 385630
240 Ga0500643_021074 3300053087 Bacteria 2118
241 Ga0500583_0000133 3300053092 Bacteria 33083
242 Ga0500555_000001 3300053103 Bacteria 1353713
243 Ga0500562_000009 3300053108 Bacteria 187538
244 Ga0500593_018301 3300053117 Bacteria 3053
245 Ga0500628_000028 3300053129 Bacteria 59993
246 Ga0500642_0000004 3300053130 Bacteria 433122
247 Ga0500561_0000001 3300053137 Bacteria 957685
248 Ga0500577_0000125 3300053142 Bacteria 18691
249 Ga0500589_000013 3300053147 Bacteria 109118
250 Ga0500616_0000005 3300053153 Bacteria 961725
251 Ga0500616_0004882 3300053153 Bacteria 9335
252 Ga0500616_0009525 3300053153 Bacteria 5904
253 Ga0500624_000405 3300053157 Bacteria 13383
254 Ga0500570_000006 3300053724 Bacteria 129824

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049131 Ga0501341_00116 Ga0501341_00116_14_1609 526
2 3300049532 Ga0501316_001186 Ga0501316_001186_471_2102 538
3 3300048925 Ga0496122_0065777 Ga0496122_0065777_74_1708 539
4 3300049161 Ga0501305_003437 Ga0501305_003437_44_1678 539
5 3300048924 Ga0496121_0109945 Ga0496121_0109945_399_2090 558
6 3300053087 Ga0500643_021074 Ga0500643_021074_306_2063 583
7 3300048921 Ga0496118_0055214 Ga0496118_0055214_1211_2986 586
8 3300003841 Ga0055541_1000341 Ga0055541_10003414 613
9 3300025225 Ga0209566_100381 Ga0209566_10038126 613
10 3300025242 Ga0209258_101763 Ga0209258_1017634 613
11 3300025294 Ga0209025_1011518 Ga0209025_10115184 613
12 3300053092 Ga0500583_0000133 Ga0500583_0000133_16230_18323 617
13 3300053147 Ga0500589_000013 Ga0500589_000013_27636_29729 617
14 3300048088 Ga0495602_0020013 Ga0495602_0020013_1770_3752 618
15 3300046665 Ga0495661_0044969 Ga0495661_0044969_710_2656 622
16 3300048913 Ga0496110_0002018 Ga0496110_0002018_7331_9277 622
17 3300048914 Ga0496111_0041008 Ga0496111_0041008_1071_3017 622
18 3300049661 Ga0501217_002152 Ga0501217_002152_1737_3683 622
19 3300049127 Ga0501306_000208 Ga0501306_000208_950_2896 624
20 3300049162 Ga0501307_000243 Ga0501307_000243_466_2412 624
21 3300049529 Ga0501313_000363 Ga0501313_000363_404_2350 624
22 3300049534 Ga0501318_000072 Ga0501318_000072_1440_3386 624
23 3300049535 Ga0501319_000038 Ga0501319_000038_1322_3268 624
24 3300049539 Ga0501323_000136 Ga0501323_000136_857_2803 624
25 3300049540 Ga0501324_000106 Ga0501324_000106_26_1972 624
26 3300049549 Ga0501333_000218 Ga0501333_000218_218_2161 624
27 3300046520 Ga0495637_0025060 Ga0495637_0025060_638_2533 625
28 3300046810 Ga0495660_0014982 Ga0495660_0014982_2355_4250 625
29 3300049531 Ga0501315_000466 Ga0501315_000466_50_1942 625
30 3300025224 Ga0209784_100054 Ga0209784_10005417 627
31 3300025292 Ga0209676_1000494 Ga0209676_100049436 627
32 3300048913 Ga0496110_0009736 Ga0496110_0009736_4083_5981 627
33 3300048914 Ga0496111_0008813 Ga0496111_0008813_3529_5427 627
34 3300046810 Ga0495660_0024377 Ga0495660_0024377_60_2042 631
35 3300025292 Ga0209676_1000128 Ga0209676_1000128141 633
36 3300025303 Ga0209051_1004424 Ga0209051_10044246 633
37 3300025304 Ga0209257_1000140 Ga0209257_1000140122 633
38 3300003578 Ga0006562J51391_1002755 Ga0006562J51391_10027552 634
39 iso_pu_bacteria 2956897341 2956898366 634
40 3300025295 Ga0209564_1000383 Ga0209564_100038318 635
41 3300037471 Ga0395905_0002366 Ga0395905_0002366_7436_9403 636
42 3300006038 Ga0075365_10000125 Ga0075365_1000012513 637
43 3300050492 nmdc:mga0yw44_2_c1 nmdc:mga0yw44_2_c1_145678_147639 637
44 iso_pu_bacteria 2788500588 2791214575 637
45 iso_pu_bacteria 2818991451 2819628354 637
46 iso_pu_bacteria 2904606771 2904609916 637
47 iso_pu_bacteria 2916971899 2916974440 637
48 iso_pu_bacteria 2939593269 2939596264 637
49 iso_pu_bacteria 8022948649 8022951545 637
50 iso_pu_bacteria 8022948649 8022954051 637
51 iso_pu_bacteria 8055531788 8055535706 637
52 3300009036 Ga0105244_10026884 Ga0105244_100268842 638
53 iso_pu_bacteria 2548877040 2550905500 638
54 iso_pu_bacteria 2563366752 2563928485 638
55 iso_pu_bacteria 2571042143 2571531640 638
56 iso_pu_bacteria 2600255286 2601639940 638
57 iso_pu_bacteria 2643221731 2644717149 638
58 iso_pu_bacteria 2643221732 2644725962 638
59 iso_pu_bacteria 2728368933 2728529486 638
60 iso_pu_bacteria 2744054657 2745168578 638
61 iso_pu_bacteria 2816332186 2816866026 638
62 iso_pu_bacteria 2816332295 2817482118 638
63 iso_pu_bacteria 2816332336 2817620950 638
64 iso_pu_bacteria 2818991465 2819710561 638
65 iso_pu_bacteria 2842682962 2842686109 638
66 iso_pu_bacteria 2842882022 2842883397 638
67 iso_pu_bacteria 2849139964 2849141881 638
68 iso_pu_bacteria 2857581216 2857585276 638
69 iso_pu_bacteria 2857609550 2857611207 638
70 iso_pu_bacteria 2881644220 2881649045 638
71 iso_pu_bacteria 2904524088 2904525929 638
72 iso_pu_bacteria 2919143609 2919145480 638
73 iso_pu_bacteria 2919414237 2919418153 638
74 iso_pu_bacteria 2919517244 2919517419 638
75 iso_pu_bacteria 2919720352 2919721800 638
76 iso_pu_bacteria 2928093941 2928094440 638
77 iso_pu_bacteria 2929004312 2929007037 638
78 iso_pu_bacteria 2938649242 2938655058 638
79 iso_pu_bacteria 2960319331 2960321674 638
80 iso_pu_bacteria 2960375949 2960379026 638
81 iso_pu_bacteria 2968558590 2968564960 638
82 iso_pu_bacteria 2988225383 2988227015 638
83 iso_pu_bacteria 2996632988 2996633118 638
84 iso_pu_bacteria 3001892409 3001893407 638
85 iso_pu_bacteria 3006858327 3006862548 638
86 iso_pu_bacteria 3006969106 3006972604 638
87 iso_pu_bacteria 3006984091 3006984762 638
88 iso_pu_bacteria 8022893055 8022893197 638
89 iso_pu_bacteria 8022914991 8022920470 638
90 iso_pu_bacteria 8054280661 8054283847 638
91 iso_pu_bacteria 8054465665 8054466304 638
92 iso_pu_bacteria 8057733483 8057735625 638
93 3300009551 Ga0105238_10068656 Ga0105238_100686563 639
94 3300048913 Ga0496110_0106691 Ga0496110_0106691_208_2154 639
95 iso_pu_bacteria 2643221609 2644063017 639
96 iso_pu_bacteria 2643221611 2644074324 639
97 iso_pu_bacteria 2738543012 2739246565 639
98 iso_pu_bacteria 2788500588 2791213593 639
99 iso_pu_bacteria 2816332133 2816476130 639
100 iso_pu_bacteria 2857604169 2857604579 639
101 iso_pu_bacteria 2907202186 2907207659 639
102 iso_pu_bacteria 2964375228 2964376387 639
103 iso_pu_bacteria 2971403814 2971404023 639
104 iso_pu_bacteria 3006988479 3006992912 639
105 iso_pu_bacteria 8055632911 8055636189 639
106 3300003187 JGI25151J46595_10002433 JGI25151J46595_100024335 640
107 3300003316 rootH1_10015116 rootH1_100151163 640
108 3300003322 rootL2_10024363 rootL2_1002436313 640
109 3300003578 Ga0006562J51391_1001731 Ga0006562J51391_10017315 640
110 3300003751 Ga0055538_1000556 Ga0055538_10005563 640
111 3300003790 Ga0055528_1005903 Ga0055528_10059033 640
112 3300009092 Ga0105250_10015903 Ga0105250_100159033 640
113 3300009101 Ga0105247_10031181 Ga0105247_100311812 640
114 3300009176 Ga0105242_10003385 Ga0105242_1000338510 640
115 3300013102 Ga0157371_10015428 Ga0157371_100154285 640
116 3300013296 Ga0157374_10032967 Ga0157374_100329672 640
117 3300014745 Ga0157377_10016328 Ga0157377_100163285 640
118 3300025224 Ga0209784_100077 Ga0209784_10007710 640
119 3300025229 Ga0209147_100310 Ga0209147_10031022 640
120 3300025273 Ga0209673_1006704 Ga0209673_10067045 640
121 3300025294 Ga0209025_1012417 Ga0209025_10124175 640
122 3300025711 Ga0207696_1003070 Ga0207696_10030706 640
123 3300025728 Ga0207655_1006080 Ga0207655_10060806 640
124 3300025735 Ga0207713_1005897 Ga0207713_10058973 640
125 3300046491 Ga0495584_0025651 Ga0495584_0025651_739_2682 640
126 3300046492 Ga0495585_0012061 Ga0495585_0012061_1423_3366 640
127 3300046558 Ga0495633_0004617 Ga0495633_0004617_2743_4680 640
128 3300048905 Ga0496102_0016616 Ga0496102_0016616_3036_4979 640
129 3300048906 Ga0496103_0015446 Ga0496103_0015446_1492_3435 640
130 3300048907 Ga0496104_0003544 Ga0496104_0003544_1415_3358 640
131 3300048908 Ga0496105_0000134 Ga0496105_0000134_34688_36631 640
132 3300048909 Ga0496106_0000391 Ga0496106_0000391_15286_17229 640
133 3300048910 Ga0496107_0001079 Ga0496107_0001079_2641_4584 640
134 3300048911 Ga0496108_0001034 Ga0496108_0001034_16426_18369 640
135 3300048912 Ga0496109_0000541 Ga0496109_0000541_18001_19944 640
136 3300048913 Ga0496110_0005997 Ga0496110_0005997_1534_3477 640
137 3300048914 Ga0496111_0010732 Ga0496111_0010732_17_1960 640
138 3300048916 Ga0496113_0079288 Ga0496113_0079288_554_2497 640
139 3300048919 Ga0496116_0002986 Ga0496116_0002986_2861_4804 640
140 3300048919 Ga0496116_0020305 Ga0496116_0020305_1825_3768 640
141 3300048920 Ga0496117_0011351 Ga0496117_0011351_1279_3222 640
142 3300048922 Ga0496119_0000912 Ga0496119_0000912_4761_6704 640
143 3300048923 Ga0496120_0001061 Ga0496120_0001061_5311_7254 640
144 3300048925 Ga0496122_0006044 Ga0496122_0006044_9283_11226 640
145 3300048925 Ga0496122_0026853 Ga0496122_0026853_2455_4398 640
146 3300048926 Ga0496123_0024424 Ga0496123_0024424_968_2911 640
147 3300048927 Ga0496124_0000662 Ga0496124_0000662_32597_34540 640
148 3300048927 Ga0496124_0010444 Ga0496124_0010444_3976_5919 640
149 3300048928 Ga0496125_0014353 Ga0496125_0014353_4330_6273 640
150 3300048929 Ga0496126_0002225 Ga0496126_0002225_4018_5961 640
151 3300048929 Ga0496126_0025094 Ga0496126_0025094_2424_4367 640
152 3300048929 Ga0496126_0095752 Ga0496126_0095752_595_2538 640
153 3300049127 Ga0501306_000193 Ga0501306_000193_1225_3168 640
154 3300049129 Ga0501309_000204 Ga0501309_000204_1227_3170 640
155 3300049130 Ga0501310_000367 Ga0501310_000367_1225_3168 640
156 3300049161 Ga0501305_000209 Ga0501305_000209_1225_3168 640
157 3300049162 Ga0501307_000088 Ga0501307_000088_1225_3168 640
158 3300049527 Ga0501311_000109 Ga0501311_000109_1229_3172 640
159 3300049528 Ga0501312_000201 Ga0501312_000201_1225_3168 640
160 3300049529 Ga0501313_000112 Ga0501313_000112_1225_3168 640
161 3300049530 Ga0501314_000091 Ga0501314_000091_1225_3168 640
162 3300049531 Ga0501315_000137 Ga0501315_000137_916_2859 640
163 3300049532 Ga0501316_000120 Ga0501316_000120_1225_3168 640
164 3300049533 Ga0501317_000129 Ga0501317_000129_1225_3168 640
165 3300049534 Ga0501318_000222 Ga0501318_000222_916_2859 640
166 3300049535 Ga0501319_000039 Ga0501319_000039_1225_3168 640
167 3300049536 Ga0501320_000086 Ga0501320_000086_1225_3168 640
168 3300049537 Ga0501321_000103 Ga0501321_000103_1226_3169 640
169 3300049538 Ga0501322_000058 Ga0501322_000058_916_2859 640
170 3300049539 Ga0501323_000139 Ga0501323_000139_1069_3012 640
171 3300049540 Ga0501324_000047 Ga0501324_000047_909_2852 640
172 3300049542 Ga0501326_00039 Ga0501326_00039_916_2859 640
173 3300049543 Ga0501327_00049 Ga0501327_00049_916_2859 640
174 3300049548 Ga0501332_00027 Ga0501332_00027_1223_3166 640
175 3300049553 Ga0501337_000075 Ga0501337_000075_686_2629 640
176 3300049554 Ga0501338_00047 Ga0501338_00047_916_2859 640
177 iso_pu_bacteria 2571042588 2573036651 640
178 iso_pu_bacteria 2576861424 2578335463 640
179 iso_pu_bacteria 2579778775 2580933399 640
180 iso_pu_bacteria 2619619294 2621273699 640
181 iso_pu_bacteria 2881636855 2881638159 640
182 iso_pu_bacteria 2971511577 2971513258 640
183 iso_pu_bacteria 2980176882 2980178428 640
184 iso_pu_bacteria 2671180330 2672336499 641
185 iso_pu_bacteria 2816332186 2816863037 641
186 iso_pu_bacteria 2818991441 2819569743 641
187 iso_pu_bacteria 2842682962 2842683085 641
188 iso_pu_bacteria 2849139964 2849143931 641
189 3300003187 JGI25151J46595_10004122 JGI25151J46595_100041228 646
190 3300025292 Ga0209676_1000611 Ga0209676_100061121 646
191 3300025294 Ga0209025_1000218 Ga0209025_100021833 646
192 3300025294 Ga0209025_1000223 Ga0209025_100022387 646
193 3300053157 Ga0500624_000405 Ga0500624_000405_5221_7227 646
194 iso_pu_bacteria 2738543017 2739268838 646
195 iso_pu_bacteria 2775507192 2777836489 646
196 iso_pu_bacteria 2857586860 2857587789 646
197 3300005336 Ga0070680_100015091 Ga0070680_1000150912 648
198 3300005458 Ga0070681_10046333 Ga0070681_100463334 648
199 3300005563 Ga0068855_100002255 Ga0068855_10000225511 648
200 3300021361 Ga0213872_10000001 Ga0213872_1000000185 648
201 3300025921 Ga0207652_10035053 Ga0207652_100350535 648
202 3300039447 Ga0436361_0404657 Ga0436361_0404657_141802_143802 648
203 3300046557 Ga0495622_0018934 Ga0495622_0018934_107_2098 649
204 3300046794 Ga0495589_0013291 Ga0495589_0013291_294_2285 649
205 3300049528 Ga0501312_000678 Ga0501312_000678_433_2424 649
206 3300049537 Ga0501321_000326 Ga0501321_000326_859_2850 649
207 3300049551 Ga0501335_000319 Ga0501335_000319_34_2025 649
208 iso_pu_bacteria 2864997549 2864999520 649
209 iso_pu_bacteria 2889295896 2889298197 649
210 iso_pu_bacteria 2936361878 2936365753 649
211 iso_pu_bacteria 2977254563 2977257989 649
212 iso_pu_bacteria 2981284811 2981286681 649
213 iso_pu_bacteria 2981289755 2981291632 649
214 iso_pu_bacteria 2981980479 2981982322 649
215 iso_pu_bacteria 2981985349 2981987225 649
216 iso_pu_bacteria 2990275345 2990279013 649
217 3300028800 Ga0265338_10000840 Ga0265338_1000084030 650
218 3300031247 Ga0265340_10000723 Ga0265340_100007238 650
219 3300031712 Ga0265342_10000624 Ga0265342_1000062411 650
220 iso_pu_bacteria 2919414237 2919418622 650
221 3300005327 Ga0070658_10001773 Ga0070658_100017732 652
222 3300005339 Ga0070660_100000777 Ga0070660_1000007778 652
223 3300005366 Ga0070659_100001607 Ga0070659_10000160710 652
224 3300005563 Ga0068855_100000184 Ga0068855_1000001843 652
225 3300005577 Ga0068857_100000007 Ga0068857_10000000763 652
226 3300009093 Ga0105240_10097122 Ga0105240_100971222 652
227 3300025909 Ga0207705_10001088 Ga0207705_1000108823 652
228 3300025919 Ga0207657_10049258 Ga0207657_100492584 652
229 3300025921 Ga0207652_10048342 Ga0207652_100483425 652
230 3300025949 Ga0207667_10000268 Ga0207667_1000026863 652
231 3300026116 Ga0207674_10000001 Ga0207674_10000001250 652
232 3300046472 Ga0495580_0003111 Ga0495580_0003111_5826_7793 652
233 3300046499 Ga0495594_0002832 Ga0495594_0002832_713_2680 652
234 3300046526 Ga0495666_0015496 Ga0495666_0015496_665_2632 652
235 3300005535 Ga0070684_100060651 Ga0070684_1000606512 653
236 3300005289 Ga0065704_10079586 Ga0065704_100795862 655
237 3300005458 Ga0070681_10000759 Ga0070681_1000075926 655
238 3300006946 Ga0079104_1000007 Ga0079104_1000007292 655
239 3300046542 Ga0495597_0001605 Ga0495597_0001605_3878_5875 655
240 3300048924 Ga0496121_0000761 Ga0496121_0000761_3354_5363 655
241 3300048928 Ga0496125_0060996 Ga0496125_0060996_627_2636 655
242 iso_pu_bacteria 2928115317 2928119637 655
243 iso_pu_bacteria 2932422444 2932425003 655
244 iso_pu_bacteria 2939631187 2939634629 655
245 3300053142 Ga0500577_0000125 Ga0500577_0000125_11010_13094 656
246 3300005530 Ga0070679_100012264 Ga0070679_1000122648 657
247 3300025294 Ga0209025_1000017 Ga0209025_1000017352 657
248 3300025295 Ga0209564_1000105 Ga0209564_1000105105 657
249 3300025921 Ga0207652_10043594 Ga0207652_100435942 657
250 iso_pu_bacteria 2831864461 2831869207 657
251 iso_pu_bacteria 2894023352 2894024861 657
252 iso_pu_bacteria 2917699015 2917699384 657
253 3300003771 Ga0055526_1006362 Ga0055526_10063624 658
254 3300004625 Ga0055543_1001100 Ga0055543_10011008 658
255 3300005262 Ga0065165_1000101 Ga0065165_100010123 658
256 3300005366 Ga0070659_100002149 Ga0070659_1000021497 658
257 3300006353 Ga0075370_10006477 Ga0075370_100064771 658
258 3300015261 Ga0182006_1000747 Ga0182006_10007476 658
259 3300025298 Ga0209050_1002935 Ga0209050_100293510 658
260 3300025303 Ga0209051_1000960 Ga0209051_100096020 658
261 3300031247 Ga0265340_10011352 Ga0265340_100113523 658
262 3300035695 Ga0373927_0000106 Ga0373927_0000106_43423_45426 658
263 3300045976 Ga0466967_0024353 Ga0466967_0024353_2490_4493 658
264 3300048928 Ga0496125_0000352 Ga0496125_0000352_81643_83646 658
265 3300048929 Ga0496126_0025822 Ga0496126_0025822_330_2333 658
266 iso_pu_bacteria 2597490356 2599104037 658
267 iso_pu_bacteria 2846952575 2846957077 658
268 iso_pu_bacteria 2848858292 2848863084 658
269 iso_pu_bacteria 2885266251 2885268524 658
270 iso_pu_bacteria 2919476304 2919477513 658
271 iso_pu_bacteria 3003665799 3003667381 659
272 3300005530 Ga0070679_100020648 Ga0070679_1000206483 660
273 3300028800 Ga0265338_10002903 Ga0265338_1000290326 660
274 3300031249 Ga0265339_10019604 Ga0265339_100196043 660
275 3300049759 Ga0501262_000152 Ga0501262_000152_27_2042 660
276 3300053130 Ga0500642_0000004 Ga0500642_0000004_328117_330225 660
277 3300002741 JGI25157J39369_1000850 JGI25157J39369_10008503 661
278 3300005356 Ga0070674_100011284 Ga0070674_1000112843 661
279 3300025904 Ga0207647_10000004 Ga0207647_10000004348 661
280 3300006844 Ga0075428_100001206 Ga0075428_1000012065 662
281 3300006846 Ga0075430_100013108 Ga0075430_1000131082 662
282 3300028800 Ga0265338_10081087 Ga0265338_100810871 662
283 3300049129 Ga0501309_000254 Ga0501309_000254_1244_3259 662
284 3300050509 nmdc:mga0qj67_10242_c1 nmdc:mga0qj67_10242_c1_4636_6750 662
285 3300028800 Ga0265338_10050149 Ga0265338_100501493 663
286 3300025949 Ga0207667_10122151 Ga0207667_101221511 665
287 3300005563 Ga0068855_100028367 Ga0068855_1000283676 666
288 3300031733 Ga0316577_10050658 Ga0316577_100506582 668
289 3300036712 Ga0316584_0008154 Ga0316584_0008154_517_2550 668
290 3300005330 Ga0070690_100001768 Ga0070690_1000017683 669
291 3300015690 Ga0183363_1008 Ga0183363_100851 669
292 3300053153 Ga0500616_0000005 Ga0500616_0000005_475268_477361 669
293 3300005355 Ga0070671_100002982 Ga0070671_1000029823 670
294 3300005617 Ga0068859_100025395 Ga0068859_1000253954 670
295 3300006051 Ga0075364_10000171 Ga0075364_100001715 670
296 3300006931 Ga0097620_100025395 Ga0097620_1000253953 670
297 3300009177 Ga0105248_10146874 Ga0105248_101468742 670
298 3300026088 Ga0207641_10007282 Ga0207641_100072825 670
299 3300031251 Ga0265327_10006548 Ga0265327_100065483 670
300 3300050491 nmdc:mga00v17_2052_c1 nmdc:mga00v17_2052_c1_257_2338 670
301 3300053137 Ga0500561_0000001 Ga0500561_0000001_374097_376223 670
302 3300005327 Ga0070658_10000717 Ga0070658_1000071713 672
303 3300025909 Ga0207705_10000280 Ga0207705_1000028044 672
304 3300014325 Ga0163163_10013005 Ga0163163_100130054 673
305 3300026035 Ga0207703_10029465 Ga0207703_100294654 675
306 3300005530 Ga0070679_100148777 Ga0070679_1001487771 680
307 3300025909 Ga0207705_10032433 Ga0207705_100324333 680
308 3300005335 Ga0070666_10000333 Ga0070666_100003336 681
309 3300014325 Ga0163163_10000670 Ga0163163_1000067018 681
310 3300053103 Ga0500555_000001 Ga0500555_000001_615278_617383 681
311 3300028800 Ga0265338_10001149 Ga0265338_1000114917 682
312 3300029957 Ga0265324_10002943 Ga0265324_100029434 682
313 3300006186 Ga0075369_10000009 Ga0075369_1000000956 685
314 3300050516 nmdc:mga0sz30_1_c1 nmdc:mga0sz30_1_c1_104389_106464 685
315 3300030745 Ga0316182_1183927 Ga0316182_11839276 686
316 3300009987 Ga0105030_100851 Ga0105030_1008512 687
317 3300013874 Ga0157514_107179 Ga0157514_1071791 687
318 3300053087 Ga0500643_000011 Ga0500643_000011_163101_165167 687
319 3300053153 Ga0500616_0004882 Ga0500616_0004882_5891_8005 688
320 3300049571 Ga0501034_0007867 Ga0501034_0007867_8905_10977 689
321 3300001990 JGI24737J22298_10000004 JGI24737J22298_1000000453 690
322 3300009176 Ga0105242_10031042 Ga0105242_100310424 690
323 3300053724 Ga0500570_000006 Ga0500570_000006_87633_89708 691
324 3300049742 Ga0501080_0002005 Ga0501080_0002005_8797_10881 693
325 3300050493 nmdc:mga0k408_8821_c1 nmdc:mga0k408_8821_c1_27_2141 693
326 3300053108 Ga0500562_000009 Ga0500562_000009_91439_93559 693
327 3300006353 Ga0075370_10022171 Ga0075370_100221712 694
328 3300050491 nmdc:mga00v17_19635_c1 nmdc:mga00v17_19635_c1_1577_3691 694
329 3300006038 Ga0075365_10013992 Ga0075365_100139923 695
330 3300006051 Ga0075364_10067624 Ga0075364_100676242 695
331 3300006195 Ga0075366_10000273 Ga0075366_1000027315 695
332 3300037418 Ga0395900_0018903 Ga0395900_0018903_2600_4723 695
333 3300050491 nmdc:mga00v17_28722_c1 nmdc:mga00v17_28722_c1_18_2108 695
334 3300050493 nmdc:mga0k408_102_c1 nmdc:mga0k408_102_c1_27337_29427 695
335 3300046506 Ga0495583_0007474 Ga0495583_0007474_1201_3300 696
336 3300006038 Ga0075365_10002079 Ga0075365_100020792 704
337 3300006042 Ga0075368_10000235 Ga0075368_100002355 704
338 3300006051 Ga0075364_10002154 Ga0075364_100021542 704
339 3300006178 Ga0075367_10000864 Ga0075367_1000086410 704
340 3300006186 Ga0075369_10000572 Ga0075369_100005725 704
341 3300031730 Ga0307516_10010407 Ga0307516_100104076 704
342 3300041410 Ga0439461_0000205 Ga0439461_0000205_3655_5769 704
343 3300050492 nmdc:mga0yw44_4_c1 nmdc:mga0yw44_4_c1_345433_347547 704
344 3300050494 nmdc:mga06z11_304_c1 nmdc:mga06z11_304_c1_4576_6690 704
345 3300050495 nmdc:mga04h51_302_c1 nmdc:mga04h51_302_c1_7779_9893 704
346 3300050516 nmdc:mga0sz30_984_c1 nmdc:mga0sz30_984_c1_4638_6752 704
347 3300053117 Ga0500593_018301 Ga0500593_018301_119_2233 704
348 3300053153 Ga0500616_0009525 Ga0500616_0009525_2057_4171 704
349 3300005367 Ga0070667_100007084 Ga0070667_1000070846 705
350 3300053129 Ga0500628_000028 Ga0500628_000028_50894_53014 706
351 3300001979 JGI24740J21852_10003714 JGI24740J21852_100037144 712

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00115

COX1

Cytochrome C and Quinol oxidase polypeptide I

59

517

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
8f68-assembly1.cif.gz_A e. coli cytochrome bo3 ubiquinol oxidase monomer 0.9677 8 670
8f68-assembly1.cif.gz_A e. coli cytochrome bo3 ubiquinol oxidase monomer 0.959 8 670
6adq-assembly1.cif.gz_F respiratory complex ciii2civ2sod2 from mycobacterium smegmatis 0.9543 50 583
7e1v-assembly1.cif.gz_F cryo-em structure of apo hybrid respiratory supercomplex consisting of mycobacterium tuberculosis complexiii and mycobacterium smegmatis complexiv 0.9539 54 583
5z62-assembly1.cif.gz_A structure of human cytochrome c oxidase 0.9537 51 571
ID Description Score Start End Superfamily
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9684 35 569 1.20.210.10
af_P9WP71_20_544_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9611 50 578 1.20.210.10
af_Q2FZK0_30_556_1.20.210.10 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9594 35 569 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9451 44 577 1.20.210.10
2yevD01 Mainly Alpha;Up-down Bundle;Cytochrome C Oxidase; Chain A;Cytochrome c oxidase-like, subunit I domain 0.9415 44 577 1.20.210.10
ID Description Score Start End GO Terms
AF-W7W9S8-F1-model_v4 Ubiquinol oxidase subunit 1 (EC 1.10.3.-) 0.9845 82 326 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904
AF-X2QGM7-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9819 182 321 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-G3XFG5-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9817 180 321 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A3G4R2U8-F1-model_v4 Cytochrome c oxidase subunit 1 (EC 7.1.1.9) 0.9813 177 321 GO:0004129
GO:0005743
GO:0006123
GO:0015990
GO:0020037
GO:0046872
AF-A0A359KEF2-F1-model_v4 Cytochrome o ubiquinol oxidase subunit I 0.9803 43 291 GO:0004129
GO:0005886
GO:0009060
GO:0009486
GO:0015990
GO:0020037
GO:0022904

Feature Viewer

pLDDT pTM Quality
86.76 0.9 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map