F417613

General Info

Members Datasets Scaffolds Average Seq Length
348 238 696 382

Family's Representative Sequence

Representative Sequence 3300036712|Ga0316584_0018140|Ga0316584_0018140_969_2168
Length 399
Sequence VSWPVPSGVVEGPACGGVTAPAGFLAAGLAAGIKASGSRDLALVVNEGPRHDAAAVFTTNRVRAAPVLWTQQCARQGRFRAVVLNSGGANACTGPEGFADTHRTAERVAALLEIAPIEVAVCSTGLIGERLPMDALLGGVATAVDALSGDGGADAAQAIMTTDSVPKLAASAEPGGWTVGGMAKGAGMLAPGLATMLVVLTTDAVVDPAELDRALREGTRTTFDRIDSDGCMSTNDTVLLLASGASGVAPEVHAFRSAVHRVCASLARQLIADAEGATKDIRIDVVNAATEADALTAARAVARSNLLKCAIHGEDPNWGRILSAVGTTDAAFEPDAIDVAINGVLVCRDGAAHGDRADVDMVGREVVLTVDLRAGDAAATLWTNDLTAMYVHENSAYST

Samples

Sample ID Description Type Environment
1 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
8 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
9 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
10 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
11 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
12 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
13 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
14 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
15 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
16 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
19 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
20 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
21 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
22 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
23 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
24 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
25 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
26 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
27 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
28 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
29 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
30 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
31 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
32 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
33 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
34 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
37 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
38 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
39 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
40 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
41 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
42 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
43 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
44 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
45 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
46 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
47 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
48 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
49 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
50 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
51 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
55 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
56 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
57 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
58 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
59 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
60 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
61 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
62 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
63 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
64 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
65 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
66 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
67 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
68 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
74 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
75 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
76 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
77 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
78 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
79 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
80 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
81 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
82 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
83 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
84 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
85 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
86 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
87 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
88 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
89 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
90 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
93 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
94 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
95 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
96 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
97 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
98 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
99 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
100 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
101 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
102 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
103 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
104 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
105 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
106 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
107 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
108 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
109 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
110 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
111 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
112 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
113 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
114 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
118 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
119 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
124 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
125 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
134 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
135 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
136 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
137 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
138 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
139 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
144 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
145 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
146 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
151 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
152 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
153 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
154 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
155 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
156 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
157 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
158 2643221578 Streptomyces sp. Root63 Isolate Unclassified
159 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
160 2643221647 Streptomyces sp. Root369 Isolate Unclassified
161 2643221670 Streptomyces sp. Root431 Isolate Unclassified
162 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
163 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
164 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
165 2643221714 Streptomyces sp. Root264 Isolate Unclassified
166 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
167 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
168 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
169 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
170 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
171 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
172 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
173 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
174 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
175 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
176 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
177 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
178 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
179 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
180 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
181 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
182 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
183 2862574272 Streptomyces sp. AcE210 Isolate Nodule
184 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
185 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
186 2867369537 Streptomyces sp. Z26 Isolate Unclassified
187 2867428634 Streptomyces sp. RP5T Isolate Unclassified
188 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
189 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
190 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
191 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
192 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
193 2891562705 Microbispora tritici MT50 Isolate Unclassified
194 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
195 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
196 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
197 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
198 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
199 2920879853 Kocuria salina CV6 Isolate Unclassified
200 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
201 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
202 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
203 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
204 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
205 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
206 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
207 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
208 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
209 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
210 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
211 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
212 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
213 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
214 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
215 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
216 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
217 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
218 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
219 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
220 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
221 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
222 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
223 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
224 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
225 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
226 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
227 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
228 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
229 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
230 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
231 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
232 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
233 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
234 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
235 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
236 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
237 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
238 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.28
Metatranscriptomes 0
Isolates 26.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.3
Nodule 0.86
Rhizoplane 2.3
Rhizosphere 75.57
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316584_0018140 3300036712 Bacteria 5074
2 JGI24739J22299_10020601 3300001989 Bacteria 2355
3 rootH1_10013042 3300003316 Bacteria 23843
4 rootH1_10034894 3300003323 Bacteria 1501
5 JGI25160J50197_1028336 3300003354 Bacteria 1505
6 Ga0070707_100148014 3300005468 Bacteria 2286
7 Ga0075363_100064859 3300006048 Bacteria 1973
8 Ga0075367_10000502 3300006178 Bacteria 14715
9 Ga0105251_10017292 3300009011 Bacteria 3869
10 Ga0105239_10381905 3300010375 Bacteria 1593
11 Ga0157369_10017037 3300013105 Bacteria 8165
12 Ga0157369_10351727 3300013105 Bacteria 1530
13 Ga0182008_10003548 3300014497 Bacteria 9370
14 Ga0182007_10000773 3300015262 Bacteria 17925
15 Ga0183367_1010 3300015688 Bacteria 416164
16 Ga0213875_10015820 3300021388 Bacteria 3667
17 Ga0207713_1015442 3300025735 Bacteria 3919
18 Ga0207647_10005183 3300025904 Bacteria 9591
19 Ga0307517_10002916 3300028786 Bacteria 27096
20 Ga0307515_10000845 3300028794 Bacteria 70367
21 Ga0307511_10010158 3300030521 Bacteria 9363
22 Ga0307511_10133100 3300030521 Bacteria 1490
23 Ga0307512_10002415 3300030522 Bacteria 23741
24 Ga0307512_10016344 3300030522 Bacteria 6850
25 Ga0307512_10070117 3300030522 Bacteria 2614
26 Ga0307513_10012553 3300031456 Bacteria 10446
27 Ga0307513_10222580 3300031456 Bacteria 1706
28 Ga0307509_10047931 3300031507 Bacteria 4593
29 Ga0307509_10160236 3300031507 Bacteria 2149
30 Ga0307508_10008391 3300031616 Bacteria 9546
31 Ga0307508_10033215 3300031616 Bacteria 4657
32 Ga0307508_10182504 3300031616 Bacteria 1701
33 Ga0307514_10123684 3300031649 Bacteria 1798
34 Ga0265342_10015886 3300031712 Bacteria 4938
35 Ga0316576_10001171 3300031727 Bacteria 13774
36 Ga0316576_10049039 3300031727 Bacteria 3065
37 Ga0316578_10039536 3300031728 Bacteria 2724
38 Ga0316578_10069713 3300031728 Bacteria 2081
39 Ga0307516_10051426 3300031730 Bacteria 4038
40 Ga0307518_10116092 3300031838 Bacteria 1901
41 Ga0307411_10083934 3300032005 Bacteria 2202
42 Ga0307507_10060860 3300033179 Bacteria 3520
43 Ga0307507_10069369 3300033179 Bacteria 3208
44 Ga0307510_10109926 3300033180 Bacteria 2503
45 Ga0307510_10142959 3300033180 Bacteria 2031
46 Ga0316574_0037989 3300035398 Bacteria 2955
47 Ga0316574_0061608 3300035398 Bacteria 2356
48 Ga0316584_0002117 3300036712 Bacteria 12420
49 Ga0395898_0006624 3300037466 Bacteria 12345
50 Ga0395898_0014763 3300037466 Bacteria 8018
51 Ga0436364_0637058 3300037853 Bacteria 6546
52 Ga0400485_07745 3300038735 Bacteria 24721
53 Ga0400488_48569 3300038741 Bacteria 5554
54 Ga0400486_04200 3300038742 Bacteria 58211
55 Ga0439436_0001200 3300041404 Bacteria 7372
56 Ga0439439_0001436 3300041406 Bacteria 4742
57 Ga0451837_0093032 3300041494 Bacteria 3529
58 Ga0451843_0276446 3300041509 Bacteria 1451
59 Ga0439457_000107 3300042014 Bacteria 19692
60 Ga0439457_005759 3300042014 Bacteria 3080
61 Ga0450894_000008 3300042131 Bacteria 27104
62 Ga0450903_000532 3300042138 Bacteria 7962
63 Ga0439458_0000871 3300042157 Bacteria 7817
64 Ga0466969_0058904 3300044656 Bacteria 1868
65 Ga0466972_0001511 3300044658 Bacteria 11318
66 Ga0466972_0005940 3300044658 Bacteria 6129
67 Ga0466972_0061222 3300044658 Bacteria 1805
68 Ga0466965_0006224 3300044683 Bacteria 5400
69 Ga0466966_0002524 3300044684 Bacteria 11996
70 Ga0466966_0016577 3300044684 Bacteria 4865
71 Ga0466966_0018262 3300044684 Bacteria 4627
72 Ga0466966_0053368 3300044684 Bacteria 2564
73 Ga0466961_0011391 3300044693 Bacteria 5688
74 Ga0466963_0000272 3300044694 Bacteria 22996
75 Ga0466963_0000738 3300044694 Bacteria 16109
76 Ga0466964_0002728 3300044706 Bacteria 6336
77 Ga0466971_0000927 3300044719 Bacteria 12042
78 Ga0466971_0110068 3300044719 Bacteria 1270
79 Ga0466968_0161631 3300044735 Bacteria 1034
80 Ga0466970_0001187 3300044765 Bacteria 12650
81 Ga0466970_0109948 3300044765 Bacteria 1505
82 Ga0466957_0000283 3300044842 Bacteria 24756
83 Ga0466960_0025499 3300044901 Bacteria 2676
84 Ga0466959_0001395 3300045049 Bacteria 14784
85 Ga0466959_0009621 3300045049 Bacteria 6876
86 Ga0466959_0010174 3300045049 Bacteria 6714
87 Ga0466959_0070542 3300045049 Bacteria 2531
88 Ga0466958_0000165 3300045836 Bacteria 23507
89 Ga0466958_0048455 3300045836 Bacteria 2568
90 Ga0495592_0012382 3300046454 Bacteria 6477
91 Ga0495592_0027217 3300046454 Bacteria 4335
92 Ga0495603_0002203 3300046455 Bacteria 11468
93 Ga0495603_0009806 3300046455 Bacteria 5794
94 Ga0495603_0018697 3300046455 Bacteria 4192
95 Ga0495603_0024041 3300046455 Bacteria 3686
96 Ga0495603_0030748 3300046455 Bacteria 3233
97 Ga0495629_0001228 3300046459 Bacteria 20123
98 Ga0495629_0010140 3300046459 Bacteria 6870
99 Ga0495629_0022534 3300046459 Bacteria 4489
100 Ga0495629_0070404 3300046459 Bacteria 2440
101 Ga0495629_0070728 3300046459 Bacteria 2434
102 Ga0495629_0081759 3300046459 Bacteria 2255
103 Ga0495638_0021327 3300046460 Bacteria 4271
104 Ga0495638_0025696 3300046460 Bacteria 3824
105 Ga0495651_0048223 3300046462 Bacteria 3290
106 Ga0495582_0040232 3300046473 Bacteria 2574
107 Ga0495605_0014658 3300046474 Bacteria 4284
108 Ga0495662_0013359 3300046476 Bacteria 3995
109 Ga0495662_0037078 3300046476 Bacteria 2354
110 Ga0495664_0006921 3300046477 Bacteria 6278
111 Ga0495585_0090803 3300046492 Bacteria 1645
112 Ga0495594_0000581 3300046499 Bacteria 18807
113 Ga0495596_0013562 3300046500 Bacteria 3451
114 Ga0495607_0025746 3300046501 Bacteria 3656
115 Ga0495583_0013578 3300046506 Bacteria 4534
116 Ga0495610_0014250 3300046512 Bacteria 4681
117 Ga0495616_0037352 3300046513 Bacteria 2499
118 Ga0495628_0063298 3300046516 Bacteria 2899
119 Ga0495628_0103466 3300046516 Bacteria 2195
120 Ga0495630_0012043 3300046517 Bacteria 6273
121 Ga0495632_0034108 3300046519 Bacteria 2607
122 Ga0495637_0039127 3300046520 Bacteria 2049
123 Ga0495648_0043201 3300046524 Bacteria 2828
124 Ga0495654_0014752 3300046530 Bacteria 4154
125 Ga0495640_0019798 3300046533 Bacteria 4964
126 Ga0495640_0024463 3300046533 Bacteria 4393
127 Ga0495587_0019914 3300046536 Bacteria 4146
128 Ga0495609_0021099 3300046538 Bacteria 3005
129 Ga0495667_0126924 3300046559 Bacteria 1646
130 Ga0495668_0014349 3300046616 Bacteria 4648
131 Ga0495611_0038778 3300046648 Bacteria 2120
132 Ga0495625_0020067 3300046660 Bacteria 5166
133 Ga0495625_0081643 3300046660 Bacteria 2249
134 Ga0495635_0001656 3300046663 Bacteria 15008
135 Ga0495635_0125670 3300046663 Bacteria 1749
136 Ga0495588_0001192 3300046674 Bacteria 11221
137 Ga0495588_0011697 3300046674 Bacteria 4124
138 Ga0495623_0153970 3300046679 Bacteria 1356
139 Ga0495646_0019012 3300046680 Bacteria 4351
140 Ga0495646_0046772 3300046680 Bacteria 2636
141 Ga0495613_0004880 3300046689 Bacteria 10070
142 Ga0495613_0031250 3300046689 Bacteria 3954
143 Ga0495613_0081270 3300046689 Bacteria 2354
144 Ga0495613_0116605 3300046689 Bacteria 1920
145 Ga0495613_0126620 3300046689 Bacteria 1831
146 Ga0495671_0016673 3300046692 Bacteria 3918
147 Ga0495649_0020096 3300046694 Bacteria 3747
148 Ga0495649_0027937 3300046694 Bacteria 3128
149 Ga0495649_0107882 3300046694 Bacteria 1477
150 Ga0495589_0021434 3300046794 Bacteria 3302
151 Ga0495600_0027173 3300046809 Bacteria 3697
152 Ga0495600_0177205 3300046809 Bacteria 1374
153 Ga0495660_0038668 3300046810 Bacteria 2651
154 Ga0495581_0018342 3300047315 Bacteria 4064
155 Ga0495581_0065692 3300047315 Bacteria 2097
156 Ga0495604_0001032 3300047317 Bacteria 23235
157 Ga0495604_0048262 3300047317 Bacteria 3312
158 Ga0495674_0048215 3300047319 Bacteria 3771
159 Ga0495676_0000233 3300047321 Bacteria 44485
160 Ga0495676_0003886 3300047321 Bacteria 13588
161 Ga0495676_0013601 3300047321 Bacteria 7305
162 Ga0495676_0013651 3300047321 Bacteria 7290
163 Ga0495687_000581 3300047443 Bacteria 42904
164 Ga0495687_011307 3300047443 Bacteria 4812
165 Ga0495687_048949 3300047443 Bacteria 1809
166 Ga0495675_0006438 3300047444 Bacteria 7190
167 Ga0495675_0049163 3300047444 Bacteria 2681
168 Ga0495675_0049317 3300047444 Bacteria 2677
169 Ga0495685_004189 3300047447 Bacteria 4644
170 Ga0495685_019378 3300047447 Bacteria 2337
171 Ga0495685_038582 3300047447 Bacteria 1636
172 Ga0495673_0052612 3300047469 Bacteria 1779
173 Ga0495681_0002686 3300047470 Bacteria 12600
174 Ga0495681_0029291 3300047470 Bacteria 2819
175 Ga0495684_0093958 3300047471 Bacteria 2271
176 Ga0495686_0016680 3300047472 Bacteria 4972
177 Ga0495686_0058548 3300047472 Bacteria 2401
178 Ga0495593_0010262 3300047673 Bacteria 5414
179 Ga0495593_0106104 3300047673 Bacteria 1437
180 Ga0495614_0000785 3300048089 Bacteria 13455
181 Ga0496106_0011223 3300048909 Bacteria 6630
182 Ga0496108_0056279 3300048911 Bacteria 3304
183 Ga0496109_0028654 3300048912 Bacteria 4983
184 Ga0496109_0146130 3300048912 Bacteria 2212
185 Ga0496112_0146777 3300048915 Bacteria 2327
186 Ga0496113_0082736 3300048916 Bacteria 2462
187 Ga0496113_0174537 3300048916 Bacteria 1703
188 Ga0501031_0000714 3300049568 Bacteria 19874
189 Ga0501032_0000989 3300049569 Bacteria 22876
190 Ga0501032_0194913 3300049569 Bacteria 1323
191 Ga0501033_0007773 3300049570 Bacteria 8309
192 Ga0501033_0017316 3300049570 Bacteria 5445
193 Ga0501033_0044705 3300049570 Bacteria 3296
194 Ga0501033_0058863 3300049570 Bacteria 2837
195 Ga0501034_0020046 3300049571 Bacteria 6830
196 Ga0501034_0021034 3300049571 Bacteria 6659
197 Ga0501034_0025901 3300049571 Bacteria 5973
198 Ga0501034_0034902 3300049571 Bacteria 5100
199 Ga0501034_0081280 3300049571 Bacteria 3243
200 Ga0501034_0108790 3300049571 Bacteria 2763
201 Ga0501036_0010672 3300049572 Bacteria 7591
202 Ga0501036_0059101 3300049572 Bacteria 3248
203 Ga0501037_0000477 3300049573 Bacteria 32398
204 Ga0501037_0001524 3300049573 Bacteria 16898
205 Ga0501038_0004554 3300049574 Bacteria 12898
206 Ga0501038_0016574 3300049574 Bacteria 6680
207 Ga0501038_0035599 3300049574 Bacteria 4370
208 Ga0501039_0025386 3300049575 Bacteria 4552
209 Ga0501039_0181252 3300049575 Bacteria 1656
210 Ga0501041_0002905 3300049577 Bacteria 9821
211 Ga0501042_0064131 3300049578 Bacteria 2625
212 Ga0501043_0000268 3300049579 Bacteria 47030
213 Ga0501043_0010947 3300049579 Bacteria 7105
214 Ga0501043_0013569 3300049579 Bacteria 6374
215 Ga0501043_0030733 3300049579 Bacteria 4224
216 Ga0501043_0034384 3300049579 Bacteria 3986
217 Ga0501046_0050467 3300049580 Bacteria 3287
218 Ga0501046_0074878 3300049580 Bacteria 2625
219 Ga0501046_0341415 3300049580 Bacteria 1088
220 Ga0501047_0004812 3300049581 Bacteria 12696
221 Ga0501047_0021374 3300049581 Bacteria 6211
222 Ga0501047_0052089 3300049581 Bacteria 3955
223 Ga0501047_0080941 3300049581 Bacteria 3122
224 Ga0501047_0160573 3300049581 Bacteria 2119
225 Ga0501047_0167466 3300049581 Bacteria 2067
226 Ga0501047_0207762 3300049581 Bacteria 1817
227 Ga0501047_0233436 3300049581 Bacteria 1692
228 Ga0501048_0021838 3300049582 Bacteria 4685
229 Ga0501068_0008835 3300049584 Bacteria 5621
230 Ga0501070_0000878 3300049586 Bacteria 27281
231 Ga0501070_0000925 3300049586 Bacteria 26486
232 Ga0501071_0004494 3300049587 Bacteria 8847
233 Ga0501073_0014065 3300049589 Bacteria 5814
234 Ga0501074_0002652 3300049590 Bacteria 12537
235 Ga0501074_0050435 3300049590 Bacteria 3004
236 Ga0501074_0066650 3300049590 Bacteria 2589
237 Ga0501077_0048182 3300049593 Bacteria 2707
238 Ga0501257_016983 3300049686 Bacteria 1692
239 Ga0501035_0001326 3300049822 Bacteria 25530
240 Ga0501035_0002168 3300049822 Bacteria 19485
241 Ga0501035_0040014 3300049822 Bacteria 4238
242 Ga0501035_0124688 3300049822 Bacteria 2249
243 Ga0501044_0000779 3300049823 Bacteria 38641
244 Ga0501044_0002172 3300049823 Bacteria 22493
245 Ga0501044_0076932 3300049823 Bacteria 3385
246 Ga0501045_0199334 3300049824 Bacteria 1491
247 nmdc:mga06z11_631_c2 3300050494 Bacteria 8295
248 Ga0500640_006352 3300053095 Bacteria 4501
249 Ga0500560_004137 3300053107 Bacteria 3042
250 Ga0500573_0014297 3300053140 Bacteria 4488
251 Ga0500573_0069887 3300053140 Bacteria 2003
252 Ga0501084_0003860 3300054114 Bacteria 12201
253 Ga0501082_0026222 3300060353 Bacteria 5022
254 Ga0466962_0000971 3300061719 Bacteria 13051
255 Ga0530510_0043013 3300061734 Bacteria 3263
256 2547406616 2547132111 Bacteria 8013147
257 2554259466 2554235005 Bacteria 6457341
258 2585302014 2582581312 Bacteria 7308206
259 2585303638 2582581313 Bacteria 10042643
260 2585321088 2582581314 Bacteria 11452267
261 2585321379 2582581314 Bacteria 11452267
262 2616695718 2616644814 Bacteria 11555299
263 2616900747 2616644941 Bacteria 8510691
264 2643904561 2643221578 Bacteria 9213798
265 2643946473 2643221587 Bacteria 7586415
266 2644268110 2643221647 Bacteria 10741251
267 2644389175 2643221670 Bacteria 6497041
268 2644406173 2643221673 Bacteria 9196637
269 2644434277 2643221677 Bacteria 7584031
270 2644443782 2643221678 Bacteria 9540101
271 2644629705 2643221714 Bacteria 9015452
272 2785343822 2784746763 Bacteria 9783172
273 2785345653 2784746763 Bacteria 9783172
274 2785367242 2784746768 Bacteria 10036182
275 2786668289 2786546132 Bacteria 10419719
276 2793981054 2791355406 Bacteria 11364898
277 2804843841 2802429296 Bacteria 7227771
278 2808847745 2808606359 Bacteria 9866990
279 2808918482 2808606375 Bacteria 9466072
280 2811847052 2808606982 Bacteria 7791042
281 2812360224 2811994879 Bacteria 9313447
282 2812482290 2811994917 Bacteria 7761064
283 2819739152 2818991472 Bacteria 10089953
284 2852637806 2852635781 Bacteria 8251373
285 2856742485 2856741275 Bacteria 8096094
286 2862180005 2862178590 Bacteria 8583590
287 2862186179 2862178590 Bacteria 8583590
288 2862295312 2862290372 Bacteria 7471434
289 2862295566 2862290372 Bacteria 7471434
290 2862383790 2862382967 Bacteria 10317375
291 2862510494 2862507626 Bacteria 9425308
292 2862583641 2862574272 Bacteria 10567477
293 2863406891 2863404153 Bacteria 9672205
294 2867346906 2867346516 Bacteria 7608576
295 2867369931 2867369537 Bacteria 6501581
296 2867431535 2867428634 Bacteria 9590268
297 2873157610 2873151551 Bacteria 8625867
298 2875392766 2875391855 Bacteria 7600475
299 2877683305 2877676314 Bacteria 9512378
300 2891403610 2891395885 Bacteria 9251614
301 2891556134 2891554331 Bacteria 8812224
302 2891563878 2891562705 Bacteria 8039471
303 2912722313 2912715099 Bacteria 9460473
304 2912726022 2912723979 Bacteria 8557534
305 2912758966 2912757875 Bacteria 7940295
306 2918502595 2918501144 Bacteria 8668083
307 2919472109 2919468124 Bacteria 9133025
308 2920883730 2920879853 Bacteria 4216831
309 2935394785 2935390628 Bacteria 7043367
310 2946051949 2946045630 Bacteria 8527308
311 2946065665 2946064051 Bacteria 8957905
312 2946074012 2946072368 Bacteria 8999607
313 2947231735 2947224130 Bacteria 9938529
314 2954010990 2954002825 Bacteria 9173742
315 2954674573 2954673503 Bacteria 9685905
316 2954689560 2954682443 Bacteria 9862841
317 2954699341 2954691527 Bacteria 10720516
318 2954702878 2954701450 Bacteria 10834262
319 2954718283 2954711539 Bacteria 10867210
320 2954728253 2954721474 Bacteria 10456478
321 2954747147 2954740390 Bacteria 10229294
322 2954752440 2954749733 Bacteria 10366972
323 2954766260 2954759201 Bacteria 9358192
324 2966604311 2966598605 Bacteria 7676064
325 2990061420 2990059506 Bacteria 9321252
326 2995469280 2995463766 Bacteria 8577691
327 2997454846 2997451912 Bacteria 8492419
328 2997605591 2997600082 Bacteria 9896405
329 3006327926 3006321560 Bacteria 8247479
330 3006399480 3006393351 Bacteria 6615579
331 3006487599 3006486233 Bacteria 8157040
332 3006499830 3006493962 Bacteria 8825450
333 8008559962 8008558824 Bacteria 10610750
334 8008580665 8008574985 Bacteria 7815457
335 8025418794 8025413630 Bacteria 7014048
336 8025485627 8025478263 Bacteria 8209203
337 8025531013 8025530807 Bacteria 8495698
338 8033688113 8033684223 Bacteria 6906479
339 8047894951 8047893842 Bacteria 11723082
340 8048130496 8048127548 Bacteria 11053136
341 8048364099 8048356638 Bacteria 11044339
342 8048371978 8048369669 Bacteria 11666822
343 8048380912 8048379754 Bacteria 11877923
344 8053947883 8053945823 Bacteria 8962862
345 8054165236 8054160619 Bacteria 7783213
346 8056670183 8056667051 Bacteria 6953971
347 8056834929 8056829672 Bacteria 9045328
348 8056835615 8056829672 Bacteria 9045328
349 Ga0316584_0018140
350 JGI24739J22299_10020601
351 rootH1_10013042
352 rootH1_10034894
353 JGI25160J50197_1028336
354 Ga0070707_100148014
355 Ga0075363_100064859
356 Ga0075367_10000502
357 Ga0105251_10017292
358 Ga0105239_10381905
359 Ga0157369_10017037
360 Ga0157369_10351727
361 Ga0182008_10003548
362 Ga0182007_10000773
363 Ga0183367_1010
364 Ga0213875_10015820
365 Ga0207713_1015442
366 Ga0207647_10005183
367 Ga0307517_10002916
368 Ga0307515_10000845
369 Ga0307511_10010158
370 Ga0307511_10133100
371 Ga0307512_10002415
372 Ga0307512_10016344
373 Ga0307512_10070117
374 Ga0307513_10012553
375 Ga0307513_10222580
376 Ga0307509_10047931
377 Ga0307509_10160236
378 Ga0307508_10008391
379 Ga0307508_10033215
380 Ga0307508_10182504
381 Ga0307514_10123684
382 Ga0265342_10015886
383 Ga0316576_10001171
384 Ga0316576_10049039
385 Ga0316578_10039536
386 Ga0316578_10069713
387 Ga0307516_10051426
388 Ga0307518_10116092
389 Ga0307411_10083934
390 Ga0307507_10060860
391 Ga0307507_10069369
392 Ga0307510_10109926
393 Ga0307510_10142959
394 Ga0316574_0037989
395 Ga0316574_0061608
396 Ga0316584_0002117
397 Ga0395898_0006624
398 Ga0395898_0014763
399 Ga0436364_0637058
400 Ga0400485_07745
401 Ga0400488_48569
402 Ga0400486_04200
403 Ga0439436_0001200
404 Ga0439439_0001436
405 Ga0451837_0093032
406 Ga0451843_0276446
407 Ga0439457_000107
408 Ga0439457_005759
409 Ga0450894_000008
410 Ga0450903_000532
411 Ga0439458_0000871
412 Ga0466969_0058904
413 Ga0466972_0001511
414 Ga0466972_0005940
415 Ga0466972_0061222
416 Ga0466965_0006224
417 Ga0466966_0002524
418 Ga0466966_0016577
419 Ga0466966_0018262
420 Ga0466966_0053368
421 Ga0466961_0011391
422 Ga0466963_0000272
423 Ga0466963_0000738
424 Ga0466964_0002728
425 Ga0466971_0000927
426 Ga0466971_0110068
427 Ga0466968_0161631
428 Ga0466970_0001187
429 Ga0466970_0109948
430 Ga0466957_0000283
431 Ga0466960_0025499
432 Ga0466959_0001395
433 Ga0466959_0009621
434 Ga0466959_0010174
435 Ga0466959_0070542
436 Ga0466958_0000165
437 Ga0466958_0048455
438 Ga0495592_0012382
439 Ga0495592_0027217
440 Ga0495603_0002203
441 Ga0495603_0009806
442 Ga0495603_0018697
443 Ga0495603_0024041
444 Ga0495603_0030748
445 Ga0495629_0001228
446 Ga0495629_0010140
447 Ga0495629_0022534
448 Ga0495629_0070404
449 Ga0495629_0070728
450 Ga0495629_0081759
451 Ga0495638_0021327
452 Ga0495638_0025696
453 Ga0495651_0048223
454 Ga0495582_0040232
455 Ga0495605_0014658
456 Ga0495662_0013359
457 Ga0495662_0037078
458 Ga0495664_0006921
459 Ga0495585_0090803
460 Ga0495594_0000581
461 Ga0495596_0013562
462 Ga0495607_0025746
463 Ga0495583_0013578
464 Ga0495610_0014250
465 Ga0495616_0037352
466 Ga0495628_0063298
467 Ga0495628_0103466
468 Ga0495630_0012043
469 Ga0495632_0034108
470 Ga0495637_0039127
471 Ga0495648_0043201
472 Ga0495654_0014752
473 Ga0495640_0019798
474 Ga0495640_0024463
475 Ga0495587_0019914
476 Ga0495609_0021099
477 Ga0495667_0126924
478 Ga0495668_0014349
479 Ga0495611_0038778
480 Ga0495625_0020067
481 Ga0495625_0081643
482 Ga0495635_0001656
483 Ga0495635_0125670
484 Ga0495588_0001192
485 Ga0495588_0011697
486 Ga0495623_0153970
487 Ga0495646_0019012
488 Ga0495646_0046772
489 Ga0495613_0004880
490 Ga0495613_0031250
491 Ga0495613_0081270
492 Ga0495613_0116605
493 Ga0495613_0126620
494 Ga0495671_0016673
495 Ga0495649_0020096
496 Ga0495649_0027937
497 Ga0495649_0107882
498 Ga0495589_0021434
499 Ga0495600_0027173
500 Ga0495600_0177205
501 Ga0495660_0038668
502 Ga0495581_0018342
503 Ga0495581_0065692
504 Ga0495604_0001032
505 Ga0495604_0048262
506 Ga0495674_0048215
507 Ga0495676_0000233
508 Ga0495676_0003886
509 Ga0495676_0013601
510 Ga0495676_0013651
511 Ga0495687_000581
512 Ga0495687_011307
513 Ga0495687_048949
514 Ga0495675_0006438
515 Ga0495675_0049163
516 Ga0495675_0049317
517 Ga0495685_004189
518 Ga0495685_019378
519 Ga0495685_038582
520 Ga0495673_0052612
521 Ga0495681_0002686
522 Ga0495681_0029291
523 Ga0495684_0093958
524 Ga0495686_0016680
525 Ga0495686_0058548
526 Ga0495593_0010262
527 Ga0495593_0106104
528 Ga0495614_0000785
529 Ga0496106_0011223
530 Ga0496108_0056279
531 Ga0496109_0028654
532 Ga0496109_0146130
533 Ga0496112_0146777
534 Ga0496113_0082736
535 Ga0496113_0174537
536 Ga0501031_0000714
537 Ga0501032_0000989
538 Ga0501032_0194913
539 Ga0501033_0007773
540 Ga0501033_0017316
541 Ga0501033_0044705
542 Ga0501033_0058863
543 Ga0501034_0020046
544 Ga0501034_0021034
545 Ga0501034_0025901
546 Ga0501034_0034902
547 Ga0501034_0081280
548 Ga0501034_0108790
549 Ga0501036_0010672
550 Ga0501036_0059101
551 Ga0501037_0000477
552 Ga0501037_0001524
553 Ga0501038_0004554
554 Ga0501038_0016574
555 Ga0501038_0035599
556 Ga0501039_0025386
557 Ga0501039_0181252
558 Ga0501041_0002905
559 Ga0501042_0064131
560 Ga0501043_0000268
561 Ga0501043_0010947
562 Ga0501043_0013569
563 Ga0501043_0030733
564 Ga0501043_0034384
565 Ga0501046_0050467
566 Ga0501046_0074878
567 Ga0501046_0341415
568 Ga0501047_0004812
569 Ga0501047_0021374
570 Ga0501047_0052089
571 Ga0501047_0080941
572 Ga0501047_0160573
573 Ga0501047_0167466
574 Ga0501047_0207762
575 Ga0501047_0233436
576 Ga0501048_0021838
577 Ga0501068_0008835
578 Ga0501070_0000878
579 Ga0501070_0000925
580 Ga0501071_0004494
581 Ga0501073_0014065
582 Ga0501074_0002652
583 Ga0501074_0050435
584 Ga0501074_0066650
585 Ga0501077_0048182
586 Ga0501257_016983
587 Ga0501035_0001326
588 Ga0501035_0002168
589 Ga0501035_0040014
590 Ga0501035_0124688
591 Ga0501044_0000779
592 Ga0501044_0002172
593 Ga0501044_0076932
594 Ga0501045_0199334
595 nmdc:mga06z11_631_c2
596 Ga0500640_006352
597 Ga0500560_004137
598 Ga0500573_0014297
599 Ga0500573_0069887
600 Ga0501084_0003860
601 Ga0501082_0026222
602 Ga0466962_0000971
603 Ga0530510_0043013
604 2547406616
605 2554259466
606 2585302014
607 2585303638
608 2585321088
609 2585321379
610 2616695718
611 2616900747
612 2643904561
613 2643946473
614 2644268110
615 2644389175
616 2644406173
617 2644434277
618 2644443782
619 2644629705
620 2785343822
621 2785345653
622 2785367242
623 2786668289
624 2793981054
625 2804843841
626 2808847745
627 2808918482
628 2811847052
629 2812360224
630 2812482290
631 2819739152
632 2852637806
633 2856742485
634 2862180005
635 2862186179
636 2862295312
637 2862295566
638 2862383790
639 2862510494
640 2862583641
641 2863406891
642 2867346906
643 2867369931
644 2867431535
645 2873157610
646 2875392766
647 2877683305
648 2891403610
649 2891556134
650 2891563878
651 2912722313
652 2912726022
653 2912758966
654 2918502595
655 2919472109
656 2920883730
657 2935394785
658 2946051949
659 2946065665
660 2946074012
661 2947231735
662 2954010990
663 2954674573
664 2954689560
665 2954699341
666 2954702878
667 2954718283
668 2954728253
669 2954747147
670 2954752440
671 2954766260
672 2966604311
673 2990061420
674 2995469280
675 2997454846
676 2997605591
677 3006327926
678 3006399480
679 3006487599
680 3006499830
681 8008559962
682 8008580665
683 8025418794
684 8025485627
685 8025531013
686 8033688113
687 8047894951
688 8048130496
689 8048364099
690 8048371978
691 8048380912
692 8053947883
693 8054165236
694 8056670183
695 8056834929
696 8056835615

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01960

ArgJ

ArgJ family

25

399

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3it4-assembly1.cif.gz_B the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a 0.9501 183 379
3it4-assembly1.cif.gz_D the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a 0.9448 183 379
3it6-assembly1.cif.gz_C the crystal structure of ornithine acetyltransferase complexed with ornithine from mycobacterium tuberculosis (rv1653) at 2.4 a 0.9374 2 181
3it4-assembly1.cif.gz_B the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a 0.9227 183 379
3it4-assembly1.cif.gz_D the crystal structure of ornithine acetyltransferase from mycobacterium tuberculosis (rv1653) at 1.7 a 0.9215 183 379
ID Description Score Start End Superfamily
3it6D01 Alpha Beta;2-Layer Sandwich;arginine biosynthesis bifunctional protein fold;arginine biosynthesis bifunctional protein suprefamily 0.9964 183 254 3.30.2330.10
af_P9WPZ3_1_199_3.60.70.12 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.96 2 175 3.60.70.12
af_Q9ZUR7_62_335_3.60.70.12 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.9406 2 258 3.60.70.12
2w4nF01 Alpha Beta;2-Layer Sandwich;arginine biosynthesis bifunctional protein fold;arginine biosynthesis bifunctional protein suprefamily 0.9385 185 254 3.30.2330.10
1vz6A01 Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase 0.9153 6 259 3.60.70.12
ID Description Score Start End GO Terms
AF-X8DTP8-F1-model_v4 Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)] 0.9912 1 131 GO:0004042
GO:0004358
GO:0005737
GO:0006526
GO:0006592
AF-A0A2S8BE12-F1-model_v4 Arginine biosynthesis bifunctional protein ArgJ [Cleaved into: Arginine biosynthesis bifunctional protein ArgJ alpha chain; Arginine biosynthesis bifunctional protein ArgJ beta chain] [Includes: Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine acetyltransferase) (OATase) (Ornithine transacetylase); Amino-acid acetyltransferase (EC 2.3.1.1) (N-acetylglutamate synthase) (AGSase)] 0.9886 2 167 GO:0004042
GO:0004358
GO:0005737
GO:0006526
GO:0006592
AF-A0A838G5J5-F1-model_v4 Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 0.9857 1 156 GO:0004042
GO:0004358
GO:0006526
GO:0006592
AF-A0A7X9CWF7-F1-model_v4 deleted 0.9854 1 113
AF-A0A413RPF5-F1-model_v4 Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 0.9842 1 105 GO:0004042
GO:0004358
GO:0006526
GO:0006592

Map