F417554

General Info

Members Datasets Scaffolds Average Seq Length
348 178 346 974

Family's Representative Sequence

Representative Sequence 3300025927|Ga0207687_10016961|Ga0207687_100169612
Length 1039
Sequence MPRWTFYLLFTVSGFAGLIYESIWTHYLKLFLGHAAYAQSLVLVVFMGGMAAGAAWCARLSERLERPLLGYALVEAVVGAAALVFHPVFVASTDWAYESLLPALGSESGALAAKLALSCLLIAPQSVLLGMTFPLMSAALVRAHPATPGESLAMLYFTNSLGAALGVLASGFLLIAPQSVLLGMTFPLVSAALVRAHPATPGESLAMLYFTNSLGAALGVLASGFLLIAWAGLPGTLRVAGWTNLALAAAVWLLARPLAVFPKISKTEEEGTSSLLLAVAFFTGLASFVYEIVWIRMLSLVLGASTHSFELMLSTFILGLALGGLAVRRRVDRAGSAERLLAWVQVAMGLAALATLPVYDLTFGLMETLMKGLARTQTGYVFFNLSGQAIAALVMLPAAFCAGTTLPLISAALLRRGAGEGAIGRVYAANTLGAIVGVVAAVHVGLPLVGLKGALISACTIDIALGLILLRVCRTTVWRAAAVACAGAILVVGLAVELDANKMTAGVFRYGDLAASRDAEILYRKDGKTATVHLVKYPEAVSLRTNGKSDGSINLDRDGVRGTDEITMVLTGALPLALRPDAKTAAVIGIGTGLTTHTLLQSLEIERVDTIEIEAAMAEAARGFMPRNVGAFADPRGAILIDDAKTFFSAHGRRYDVIVSEPSNPWVSGVSSLFTREFYQRIRRHLAPRGLLVQWIQLYEIDPSLVATVMRALGEAFPDYAVFAASEHDLLIVASEAPLPLPPRADVFEHPGVAQELLSVHILSAGDLDARYLGNRALLEPLFASYGMPANTDYAPVLDLNAARQRFMERSATELVALLDADVPLLELLDPGRSRRPVNPLYKGAYAFGRVEATRLAWYARNFLAGARPEPEAVPTQLQKDLELVQLRLLECREPRQLDVWLHSALRVARTVNPYLAPDDAGAVWRAIASTKCFSTLPQFQRRWIELFAAVAARDPARMARHARELLDTTPELAADAREYLVLAALSGSVAGRDKPAALELWRAQKSSLRAPAAPAFRLLRCHADAASCAAEFSLYAER

Samples

Sample ID Description Type Environment
1 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
2 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
57 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027364 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
83 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
84 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
85 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
86 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
88 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
89 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
90 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
91 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
92 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
96 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
97 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
98 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
99 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
100 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
101 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
102 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
103 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
104 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
105 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
106 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
107 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
113 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
114 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
115 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
116 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
117 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
122 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
123 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
124 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
128 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
129 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
130 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
131 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
134 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
138 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
145 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
158 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
159 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
160 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
172 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
173 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
174 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.44
Nodule 0
Rhizoplane 0
Rhizosphere 97.7
Stem 0
Stem Tuber 0
Unclassified 0.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055540_1001161 3300003792 Bacteria 16398
2 Ga0055531_10000211 3300003794 Bacteria 64226
3 Ga0070683_100021069 3300005329 Bacteria 5814
4 Ga0070690_100000352 3300005330 Bacteria 23682
5 Ga0070690_100008314 3300005330 Bacteria 5971
6 Ga0068869_100000512 3300005334 Bacteria 21609
7 Ga0070680_100001459 3300005336 Bacteria 17140
8 Ga0068868_100000262 3300005338 Bacteria 35722
9 Ga0070689_100003157 3300005340 Bacteria 10898
10 Ga0070691_10004014 3300005341 Bacteria 6665
11 Ga0070692_10006581 3300005345 Bacteria 5055
12 Ga0070692_10016672 3300005345 Bacteria 3499
13 Ga0070668_100015344 3300005347 Bacteria 5725
14 Ga0070669_100001314 3300005353 Bacteria 17949
15 Ga0070701_10000307 3300005438 Bacteria 15985
16 Ga0070701_10001019 3300005438 Bacteria 10211
17 Ga0070705_100000343 3300005440 Bacteria 27460
18 Ga0070705_100002561 3300005440 Bacteria 9134
19 Ga0070700_100000221 3300005441 Bacteria 31693
20 Ga0070700_100000230 3300005441 Bacteria 30920
21 Ga0070700_100007137 3300005441 Bacteria 6013
22 Ga0070694_100000253 3300005444 Bacteria 28222
23 Ga0070694_100008113 3300005444 Bacteria 6413
24 Ga0070694_100025669 3300005444 Bacteria 3812
25 Ga0070694_100040491 3300005444 Bacteria 3106
26 Ga0070681_10000615 3300005458 Bacteria 29209
27 Ga0070681_10047443 3300005458 Bacteria 4293
28 Ga0068867_100001201 3300005459 Bacteria 17780
29 Ga0068867_100002103 3300005459 Bacteria 13951
30 Ga0070697_100001109 3300005536 Bacteria 20376
31 Ga0070686_100000370 3300005544 Bacteria 28593
32 Ga0070686_100003351 3300005544 Bacteria 8779
33 Ga0070695_100000423 3300005545 Bacteria 21846
34 Ga0070695_100004329 3300005545 Bacteria 8315
35 Ga0070696_100000073 3300005546 Bacteria 49104
36 Ga0070696_100003689 3300005546 Bacteria 10217
37 Ga0070696_100025869 3300005546 Bacteria 3992
38 Ga0070696_100030016 3300005546 Bacteria 3719
39 Ga0070693_100000443 3300005547 Bacteria 18673
40 Ga0070704_100001092 3300005549 Bacteria 14073
41 Ga0070704_100009570 3300005549 Bacteria 5866
42 Ga0068855_100004746 3300005563 Bacteria 16595
43 Ga0070702_100001247 3300005615 Bacteria 10320
44 Ga0068859_100001384 3300005617 Bacteria 24672
45 Ga0068866_10000217 3300005718 Bacteria 27279
46 Ga0068861_100000142 3300005719 Bacteria 36697
47 Ga0068861_100000311 3300005719 Bacteria 27225
48 Ga0068858_100003054 3300005842 Bacteria 16779
49 Ga0068858_100015029 3300005842 Bacteria 7283
50 Ga0068860_100001142 3300005843 Bacteria 29124
51 Ga0068862_100001915 3300005844 Bacteria 18896
52 Ga0068862_100002479 3300005844 Bacteria 16336
53 Ga0081539_10000004 3300005985 Bacteria 555600
54 Ga0081539_10000178 3300005985 Bacteria 149201
55 Ga0070716_100003846 3300006173 Bacteria 7126
56 Ga0070716_100010078 3300006173 Bacteria 4728
57 Ga0097621_100002277 3300006237 Bacteria 13146
58 Ga0097621_100002990 3300006237 Bacteria 11616
59 Ga0068871_100000331 3300006358 Bacteria 32799
60 Ga0068871_100001696 3300006358 Bacteria 14784
61 Ga0068871_100010333 3300006358 Bacteria 6805
62 Ga0075428_100002006 3300006844 Bacteria 21940
63 Ga0075428_100015062 3300006844 Bacteria 8590
64 Ga0075428_100037605 3300006844 Bacteria 5327
65 Ga0075430_100005926 3300006846 Bacteria 10322
66 Ga0075430_100014994 3300006846 Bacteria 6600
67 Ga0075430_100016113 3300006846 Bacteria 6365
68 Ga0075430_100026504 3300006846 Bacteria 4930
69 Ga0075431_100001787 3300006847 Bacteria 20288
70 Ga0075431_100021640 3300006847 Bacteria 6577
71 Ga0075431_100026646 3300006847 Bacteria 5929
72 Ga0075431_100078799 3300006847 Bacteria 3401
73 Ga0075433_10018143 3300006852 Bacteria 5844
74 Ga0075434_100000784 3300006871 Bacteria 25133
75 Ga0075434_100007320 3300006871 Bacteria 10215
76 Ga0075429_100000003 3300006880 Bacteria 130377
77 Ga0075429_100000167 3300006880 Bacteria 42008
78 Ga0068865_100000456 3300006881 Bacteria 22794
79 Ga0075436_100008333 3300006914 Bacteria 7088
80 Ga0075436_100010157 3300006914 Bacteria 6446
81 Ga0075436_100016238 3300006914 Bacteria 5096
82 Ga0097620_100001384 3300006931 Bacteria 24672
83 Ga0075435_100000429 3300007076 Bacteria 25739
84 Ga0111539_10001073 3300009094 Bacteria 36082
85 Ga0111539_10004725 3300009094 Bacteria 17800
86 Ga0111539_10005067 3300009094 Bacteria 17113
87 Ga0111539_10032660 3300009094 Bacteria 6320
88 Ga0111539_10040944 3300009094 Bacteria 5574
89 Ga0111539_10042819 3300009094 Bacteria 5433
90 Ga0111539_10111002 3300009094 Bacteria 3218
91 Ga0105245_10000576 3300009098 Bacteria 33328
92 Ga0114129_10007217 3300009147 Bacteria 15819
93 Ga0114129_10035845 3300009147 Bacteria 7006
94 Ga0105243_10000974 3300009148 Bacteria 26629
95 Ga0105243_10007202 3300009148 Bacteria 8548
96 Ga0105242_10001474 3300009176 Bacteria 18518
97 Ga0105242_10003211 3300009176 Bacteria 12730
98 Ga0105249_10003893 3300009553 Bacteria 12898
99 Ga0105249_10005297 3300009553 Bacteria 11138
100 Ga0157378_10000814 3300013297 Bacteria 28997
101 Ga0157378_10010650 3300013297 Bacteria 8036
102 Ga0163163_10033665 3300014325 Bacteria 4958
103 Ga0157380_10004547 3300014326 Bacteria 9629
104 Ga0157376_10001072 3300014969 Bacteria 17915
105 Ga0209051_1000115 3300025303 Bacteria 152010
106 Ga0209257_1000055 3300025304 Bacteria 415534
107 Ga0207660_10001194 3300025917 Bacteria 17424
108 Ga0207662_10000112 3300025918 Bacteria 38862
109 Ga0207681_10000523 3300025923 Bacteria 26591
110 Ga0207687_10016961 3300025927 Bacteria 4787
111 Ga0207709_10001456 3300025935 Bacteria 16481
112 Ga0207709_10002770 3300025935 Bacteria 10808
113 Ga0207670_10002135 3300025936 Bacteria 10340
114 Ga0207704_10000301 3300025938 Bacteria 23320
115 Ga0207704_10000910 3300025938 Bacteria 13103
116 Ga0207691_10056690 3300025940 Bacteria 3568
117 Ga0207689_10001636 3300025942 Bacteria 21219
118 Ga0207667_10011562 3300025949 Bacteria 10251
119 Ga0207712_10010145 3300025961 Bacteria 5973
120 Ga0207668_10012468 3300025972 Bacteria 5204
121 Ga0207677_10000537 3300026023 Bacteria 23957
122 Ga0207703_10003759 3300026035 Bacteria 12627
123 Ga0207708_10000324 3300026075 Bacteria 37852
124 Ga0207708_10001056 3300026075 Bacteria 20639
125 Ga0207708_10014052 3300026075 Bacteria 5982
126 Ga0207641_10025037 3300026088 Bacteria 4921
127 Ga0207648_10000205 3300026089 Bacteria 62995
128 Ga0207648_10000680 3300026089 Bacteria 38152
129 Ga0207675_100000851 3300026118 Bacteria 30404
130 Ga0207675_100001096 3300026118 Bacteria 26828
131 Ga0209967_1000703 3300027364 Bacteria 4314
132 Ga0210000_1001384 3300027462 Bacteria 3424
133 Ga0207428_10002108 3300027907 Bacteria 20049
134 Ga0207428_10002931 3300027907 Bacteria 16910
135 Ga0207428_10003365 3300027907 Bacteria 15539
136 Ga0268265_10000691 3300028380 Bacteria 33178
137 Ga0268265_10002780 3300028380 Bacteria 12899
138 Ga0268264_10001774 3300028381 Bacteria 19721
139 Ga0307513_10066022 3300031456 Bacteria 3804
140 Ga0307406_10007847 3300031901 Bacteria 5938
141 Ga0373934_0000092 3300035086 Bacteria 31400
142 Ga0373934_0005043 3300035086 Bacteria 4891
143 Ga0373923_0000715 3300035111 Bacteria 8523
144 Ga0373936_0006148 3300035113 Bacteria 4523
145 Ga0373953_0003785 3300035117 Bacteria 4758
146 Ga0373954_0000523 3300035118 Bacteria 14407
147 Ga0373954_0001910 3300035118 Bacteria 8620
148 Ga0373954_0003515 3300035118 Bacteria 6657
149 Ga0373954_0004325 3300035118 Bacteria 6106
150 Ga0373956_0000029 3300035119 Bacteria 45843
151 Ga0373956_0005899 3300035119 Bacteria 4899
152 Ga0373957_0006228 3300035120 Bacteria 3749
153 Ga0373955_0001079 3300035172 Bacteria 11599
154 Ga0373955_0005060 3300035172 Bacteria 5896
155 Ga0373924_0010448 3300035410 Bacteria 3422
156 Ga0373931_0000108 3300035691 Bacteria 37813
157 Ga0373935_0008121 3300035692 Bacteria 6291
158 Ga0373933_0001487 3300035724 Bacteria 13722
159 Ga0373933_0002481 3300035724 Bacteria 10383
160 Ga0373933_0008644 3300035724 Bacteria 5555
161 Ga0373933_0008888 3300035724 Bacteria 5477
162 Ga0373947_0021135 3300035725 Bacteria 3765
163 Ga0373937_0000233 3300036401 Bacteria 54240
164 Ga0373937_0004813 3300036401 Bacteria 11472
165 Ga0373937_0026646 3300036401 Bacteria 5222
166 Ga0395905_0080332 3300037471 Bacteria 3056
167 Ga0400490_03529 3300038726 Bacteria 5286
168 Ga0400487_40193 3300039110 Bacteria 5257
169 Ga0439461_0000569 3300041410 Bacteria 5346
170 Ga0439434_0000446 3300042435 Bacteria 11789
171 Ga0439435_0000009 3300042436 Bacteria 21467
172 Ga0439435_0000030 3300042436 Bacteria 15777
173 Ga0451577_0000028 3300042876 Bacteria 395361
174 Ga0451577_0007401 3300042876 Bacteria 10777
175 Ga0451577_0008011 3300042876 Bacteria 10314
176 Ga0451577_0046689 3300042876 Unclassified 3874
177 Ga0453683_0000012 3300044673 Bacteria 376341
178 Ga0453683_0001746 3300044673 Bacteria 18032
179 Ga0453683_0008925 3300044673 Bacteria 6705
180 Ga0453683_0026244 3300044673 Unclassified 3700
181 Ga0453683_0028300 3300044673 Bacteria 3550
182 Ga0453684_0000281 3300044712 Bacteria 219577
183 Ga0453684_0000472 3300044712 Bacteria 159406
184 Ga0453684_0001149 3300044712 Bacteria 82600
185 Ga0453684_0001277 3300044712 Bacteria 75282
186 Ga0453684_0004969 3300044712 Bacteria 27055
187 Ga0453684_0009820 3300044712 Bacteria 16584
188 Ga0453684_0010231 3300044712 Bacteria 16073
189 Ga0453684_0025555 3300044712 Bacteria 8570
190 Ga0453684_0086554 3300044712 Bacteria 3888
191 Ga0451576_0000026 3300045051 Bacteria 427585
192 Ga0451576_0000490 3300045051 Bacteria 87626
193 Ga0451576_0003297 3300045051 Bacteria 22419
194 Ga0451576_0020726 3300045051 Bacteria 7155
195 Ga0495592_0007211 3300046454 Bacteria 8327
196 Ga0495592_0012567 3300046454 Bacteria 6434
197 Ga0495641_0002872 3300046461 Bacteria 13318
198 Ga0495651_0000178 3300046462 Bacteria 47161
199 Ga0495651_0001600 3300046462 Bacteria 17516
200 Ga0495651_0002367 3300046462 Bacteria 14567
201 Ga0495653_0011537 3300046463 Bacteria 7215
202 Ga0495653_0027606 3300046463 Bacteria 4542
203 Ga0495580_0020152 3300046472 Bacteria 4942
204 Ga0495582_0007552 3300046473 Bacteria 6014
205 Ga0495639_0004318 3300046475 Bacteria 6096
206 Ga0495662_0016602 3300046476 Bacteria 3567
207 Ga0495608_0019497 3300046511 Bacteria 4666
208 Ga0495608_0032251 3300046511 Bacteria 3541
209 Ga0495618_0008485 3300046514 Bacteria 6213
210 Ga0495618_0019807 3300046514 Bacteria 4141
211 Ga0495628_0004302 3300046516 Bacteria 12651
212 Ga0495628_0012241 3300046516 Bacteria 7232
213 Ga0495630_0001696 3300046517 Bacteria 15381
214 Ga0495630_0007741 3300046517 Bacteria 7688
215 Ga0495630_0038361 3300046517 Bacteria 3583
216 Ga0495652_0013632 3300046529 Bacteria 7315
217 Ga0495652_0021622 3300046529 Bacteria 5718
218 Ga0495665_0011739 3300046531 Bacteria 4747
219 Ga0495640_0010267 3300046533 Bacteria 7245
220 Ga0495587_0021492 3300046536 Bacteria 3979
221 Ga0495645_0002151 3300046543 Bacteria 13376
222 Ga0495667_0051023 3300046559 Unclassified 2729
223 Ga0495634_0003720 3300046642 Bacteria 12160
224 Ga0495657_0015677 3300046675 Bacteria 5538
225 Ga0495599_0004895 3300046678 Bacteria 7963
226 Ga0495623_0010279 3300046679 Bacteria 6056
227 Ga0495647_0003590 3300046681 Bacteria 4976
228 Ga0495658_0004022 3300046683 Bacteria 7248
229 Ga0495600_0004915 3300046809 Bacteria 8026
230 Ga0495604_0037557 3300047317 Bacteria 3813
231 Ga0495636_0001867 3300047318 Bacteria 8053
232 Ga0495674_0005529 3300047319 Bacteria 12121
233 Ga0495680_0004927 3300047322 Bacteria 12637
234 Ga0495675_0001531 3300047444 Bacteria 13954
235 Ga0495684_0043764 3300047471 Bacteria 3428
236 Ga0501033_0022270 3300049570 Bacteria 4781
237 Ga0501034_0003219 3300049571 Bacteria 18691
238 Ga0501036_0000101 3300049572 Bacteria 53813
239 Ga0501036_0021307 3300049572 Bacteria 5447
240 Ga0501037_0021476 3300049573 Bacteria 4772
241 Ga0501038_0001381 3300049574 Bacteria 22182
242 Ga0501038_0056769 3300049574 Bacteria 3363
243 Ga0501039_0000117 3300049575 Bacteria 54402
244 Ga0501039_0000129 3300049575 Bacteria 52452
245 Ga0501039_0000767 3300049575 Bacteria 23070
246 Ga0501040_0001539 3300049576 Bacteria 14666
247 Ga0501040_0003368 3300049576 Bacteria 10319
248 Ga0501041_0000040 3300049577 Bacteria 43977
249 Ga0501041_0000048 3300049577 Bacteria 42332
250 Ga0501041_0003178 3300049577 Bacteria 9445
251 Ga0501041_0003243 3300049577 Bacteria 9356
252 Ga0501041_0003728 3300049577 Bacteria 8761
253 Ga0501041_0026252 3300049577 Bacteria 3503
254 Ga0501041_0027748 3300049577 Bacteria 3413
255 Ga0501042_0000026 3300049578 Bacteria 48274
256 Ga0501042_0022660 3300049578 Bacteria 4388
257 Ga0501043_0003448 3300049579 Bacteria 12994
258 Ga0501043_0016022 3300049579 Bacteria 5877
259 Ga0501046_0000705 3300049580 Bacteria 32282
260 Ga0501046_0005604 3300049580 Bacteria 11206
261 Ga0501046_0021460 3300049580 Bacteria 5329
262 Ga0501048_0001332 3300049582 Bacteria 18718
263 Ga0501048_0006833 3300049582 Bacteria 8669
264 Ga0501048_0014211 3300049582 Bacteria 5897
265 Ga0501048_0032021 3300049582 Bacteria 3802
266 Ga0501071_0000133 3300049587 Bacteria 30216
267 Ga0501071_0004223 3300049587 Bacteria 9097
268 Ga0501071_0005450 3300049587 Bacteria 8181
269 Ga0501071_0016537 3300049587 Bacteria 5075
270 Ga0501072_0000528 3300049588 Bacteria 27443
271 Ga0501072_0003663 3300049588 Bacteria 11578
272 Ga0501072_0008146 3300049588 Bacteria 7954
273 Ga0501072_0029284 3300049588 Bacteria 4300
274 Ga0501074_0017163 3300049590 Bacteria 5251
275 Ga0501075_0000036 3300049591 Bacteria 55260
276 Ga0501075_0000204 3300049591 Bacteria 31579
277 Ga0501075_0001062 3300049591 Bacteria 17678
278 Ga0501075_0001945 3300049591 Bacteria 13626
279 Ga0501075_0013219 3300049591 Bacteria 5888
280 Ga0501075_0033535 3300049591 Bacteria 3820
281 Ga0501076_0000220 3300049592 Bacteria 34479
282 Ga0501076_0000445 3300049592 Bacteria 26163
283 Ga0501076_0001309 3300049592 Bacteria 16612
284 Ga0501076_0001733 3300049592 Bacteria 14751
285 Ga0501076_0004383 3300049592 Bacteria 10029
286 Ga0501077_0000855 3300049593 Bacteria 18401
287 Ga0501077_0004038 3300049593 Bacteria 8858
288 Ga0501079_0000807 3300049741 Bacteria 21328
289 Ga0501079_0000879 3300049741 Bacteria 20602
290 Ga0501079_0001228 3300049741 Bacteria 17937
291 Ga0501079_0010287 3300049741 Bacteria 7106
292 Ga0501079_0022470 3300049741 Bacteria 4837
293 Ga0501080_0003496 3300049742 Bacteria 13842
294 Ga0501080_0009588 3300049742 Bacteria 8840
295 Ga0501080_0018468 3300049742 Bacteria 6454
296 Ga0501080_0056144 3300049742 Bacteria 3668
297 Ga0501081_0000074 3300049743 Bacteria 39073
298 Ga0501081_0000160 3300049743 Bacteria 31010
299 Ga0501081_0001002 3300049743 Bacteria 16840
300 Ga0501081_0002137 3300049743 Bacteria 12374
301 Ga0501081_0007710 3300049743 Bacteria 6980
302 Ga0501081_0008051 3300049743 Bacteria 6839
303 Ga0501081_0014374 3300049743 Bacteria 5221
304 Ga0501044_0046616 3300049823 Bacteria 4487
305 Ga0501045_0000203 3300049824 Bacteria 33847
306 Ga0501045_0000438 3300049824 Bacteria 25526
307 Ga0501045_0041655 3300049824 Bacteria 3341
308 nmdc:mga05p37_10630_c1 3300050507 Bacteria 10919
309 nmdc:mga05p37_12883_c1 3300050507 Bacteria 9999
310 nmdc:mga05p37_976_c1 3300050507 Bacteria 32490
311 nmdc:mga09592_10_c1 3300050508 Bacteria 106937
312 nmdc:mga09592_355_c1 3300050508 Bacteria 33629
313 nmdc:mga09592_63597_c1 3300050508 Bacteria 3124
314 nmdc:mga0qj67_3867_c1 3300050509 Bacteria 10817
315 nmdc:mga06r32_1279_c1 3300050510 Bacteria 22640
316 nmdc:mga06r32_24155_c1 3300050510 Bacteria 5636
317 nmdc:mga06r32_42720_c1 3300050510 Bacteria 4312
318 nmdc:mga08y16_11063_c1 3300050511 Bacteria 9474
319 nmdc:mga08y16_2521_c1 3300050511 Bacteria 18816
320 nmdc:mga08y16_26507_c1 3300050511 Bacteria 6110
321 nmdc:mga08y16_3067_c1 3300050511 Bacteria 17268
322 nmdc:mga0n895_11306_c1 3300050512 Bacteria 7955
323 nmdc:mga0n895_3499_c1 3300050512 Bacteria 12688
324 nmdc:mga0rr50_2558_c1 3300050513 Bacteria 10305
325 nmdc:mga08x19_15105_c1 3300050514 Bacteria 4693
326 nmdc:mga08x19_8960_c1 3300050514 Bacteria 5971
327 nmdc:mga0a205_18977_c1 3300050515 Bacteria 6478
328 nmdc:mga0a205_19914_c1 3300050515 Bacteria 6329
329 Ga0495601_0001071 3300053077 Bacteria 14992
330 Ga0495601_0015240 3300053077 Bacteria 4644
331 Ga0495601_0028343 3300053077 Bacteria 3469
332 Ga0495595_0002613 3300053084 Bacteria 7060
333 Ga0495619_0001844 3300053085 Bacteria 14101
334 Ga0500616_0000212 3300053153 Bacteria 93017
335 Ga0501084_0000408 3300054114 Bacteria 33211
336 Ga0590071_003775 3300059421 Bacteria 3716
337 Ga0501082_0000215 3300060353 Bacteria 50556
338 Ga0501082_0000619 3300060353 Bacteria 31222
339 Ga0501082_0003041 3300060353 Bacteria 14659
340 Ga0501082_0004940 3300060353 Bacteria 11633
341 Ga0501082_0005685 3300060353 Bacteria 10819
342 Ga0501082_0007376 3300060353 Bacteria 9489
343 Ga0501082_0015417 3300060353 Bacteria 6578
344 Ga0530510_0000117 3300061734 Bacteria 45062
345 Ga0530510_0000257 3300061734 Bacteria 33336
346 Ga0530510_0034719 3300061734 Bacteria 3633

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046559 Ga0495667_0051023 Ga0495667_0051023_51_2540 769
2 3300049591 Ga0501075_0033535 Ga0501075_0033535_33_2486 780
3 3300049742 Ga0501080_0056144 Ga0501080_0056144_15_2696 782
4 3300050514 nmdc:mga08x19_15105_c1 nmdc:mga08x19_15105_c1_12_2543 789
5 3300045051 Ga0451576_0003297 Ga0451576_0003297_19682_22354 827
6 3300037471 Ga0395905_0080332 Ga0395905_0080332_341_3016 830
7 3300005546 Ga0070696_100025869 Ga0070696_1000258692 832
8 3300044712 Ga0453684_0004969 Ga0453684_0004969_18892_21891 857
9 3300006914 Ga0075436_100010157 Ga0075436_1000101573 861
10 3300049582 Ga0501048_0032021 Ga0501048_0032021_290_3196 861
11 3300025940 Ga0207691_10056690 Ga0207691_100566902 867
12 3300027364 Ga0209967_1000703 Ga0209967_10007033 871
13 3300050514 nmdc:mga08x19_8960_c1 nmdc:mga08x19_8960_c1_762_3713 872
14 3300046454 Ga0495592_0007211 Ga0495592_0007211_1113_4067 873
15 3300046679 Ga0495623_0010279 Ga0495623_0010279_2754_5708 873
16 3300005347 Ga0070668_100015344 Ga0070668_1000153442 877
17 3300005353 Ga0070669_100001314 Ga0070669_10000131412 877
18 3300005441 Ga0070700_100000221 Ga0070700_10000022120 877
19 3300005459 Ga0068867_100001201 Ga0068867_10000120113 877
20 3300005719 Ga0068861_100000142 Ga0068861_10000014211 877
21 3300005844 Ga0068862_100002479 Ga0068862_10000247915 877
22 3300009094 Ga0111539_10004725 Ga0111539_1000472511 877
23 3300009148 Ga0105243_10007202 Ga0105243_100072026 877
24 3300009553 Ga0105249_10003893 Ga0105249_100038935 877
25 3300014326 Ga0157380_10004547 Ga0157380_100045479 877
26 3300025923 Ga0207681_10000523 Ga0207681_1000052322 877
27 3300025935 Ga0207709_10001456 Ga0207709_1000145613 877
28 3300025938 Ga0207704_10000910 Ga0207704_100009102 877
29 3300025972 Ga0207668_10012468 Ga0207668_100124681 877
30 3300026075 Ga0207708_10000324 Ga0207708_1000032420 877
31 3300026089 Ga0207648_10000680 Ga0207648_1000068013 877
32 3300026118 Ga0207675_100001096 Ga0207675_10000109624 877
33 3300028380 Ga0268265_10000691 Ga0268265_100006917 877
34 3300046683 Ga0495658_0004022 Ga0495658_0004022_3978_6965 879
35 3300009094 Ga0111539_10040944 Ga0111539_100409441 880
36 3300053153 Ga0500616_0000212 Ga0500616_0000212_49734_52691 880
37 3300050512 nmdc:mga0n895_11306_c1 nmdc:mga0n895_11306_c1_4662_7622 882
38 3300005985 Ga0081539_10000178 Ga0081539_10000178102 883
39 3300005549 Ga0070704_100009570 Ga0070704_1000095703 884
40 3300005458 Ga0070681_10000615 Ga0070681_1000061524 886
41 3300049577 Ga0501041_0003728 Ga0501041_0003728_1587_4535 886
42 3300049580 Ga0501046_0021460 Ga0501046_0021460_2364_5312 886
43 3300049587 Ga0501071_0016537 Ga0501071_0016537_149_3097 886
44 3300049591 Ga0501075_0001945 Ga0501075_0001945_5547_8495 886
45 3300049592 Ga0501076_0000445 Ga0501076_0000445_12237_15185 886
46 3300049741 Ga0501079_0010287 Ga0501079_0010287_119_3067 886
47 3300049743 Ga0501081_0007710 Ga0501081_0007710_858_3806 886
48 3300060353 Ga0501082_0004940 Ga0501082_0004940_7776_10724 886
49 3300006880 Ga0075429_100000167 Ga0075429_10000016738 887
50 3300006173 Ga0070716_100003846 Ga0070716_1000038463 888
51 3300042876 Ga0451577_0000028 Ga0451577_0000028_151701_154745 888
52 3300044673 Ga0453683_0008925 Ga0453683_0008925_1581_4625 888
53 3300044712 Ga0453684_0000472 Ga0453684_0000472_4661_7705 888
54 3300046516 Ga0495628_0004302 Ga0495628_0004302_9370_12321 889
55 3300046529 Ga0495652_0013632 Ga0495652_0013632_3648_6599 889
56 3300046543 Ga0495645_0002151 Ga0495645_0002151_7352_10303 889
57 3300053077 Ga0495601_0015240 Ga0495601_0015240_1459_4410 889
58 3300006846 Ga0075430_100014994 Ga0075430_1000149943 891
59 3300006846 Ga0075430_100026504 Ga0075430_1000265044 891
60 3300006871 Ga0075434_100007320 Ga0075434_1000073206 893
61 3300035118 Ga0373954_0000523 Ga0373954_0000523_7837_10806 893
62 3300031901 Ga0307406_10007847 Ga0307406_100078472 894
63 3300042876 Ga0451577_0008011 Ga0451577_0008011_720_3704 894
64 3300006844 Ga0075428_100037605 Ga0075428_1000376052 895
65 3300035692 Ga0373935_0008121 Ga0373935_0008121_1931_4891 895
66 3300049742 Ga0501080_0003496 Ga0501080_0003496_10438_13434 895
67 3300050515 nmdc:mga0a205_19914_c1 nmdc:mga0a205_19914_c1_559_3513 895
68 3300006844 Ga0075428_100002006 Ga0075428_10000200611 897
69 3300009094 Ga0111539_10111002 Ga0111539_101110022 897
70 3300027907 Ga0207428_10002931 Ga0207428_100029316 897
71 3300050508 nmdc:mga09592_63597_c1 nmdc:mga09592_63597_c1_105_3074 897
72 3300050511 nmdc:mga08y16_26507_c1 nmdc:mga08y16_26507_c1_2815_5784 897
73 3300005440 Ga0070705_100002561 Ga0070705_1000025616 898
74 3300005444 Ga0070694_100040491 Ga0070694_1000404911 898
75 3300005545 Ga0070695_100004329 Ga0070695_1000043292 898
76 3300005546 Ga0070696_100003689 Ga0070696_1000036895 898
77 3300006914 Ga0075436_100008333 Ga0075436_1000083333 898
78 3300044712 Ga0453684_0001149 Ga0453684_0001149_63702_66746 898
79 3300005329 Ga0070683_100021069 Ga0070683_1000210694 899
80 3300005330 Ga0070690_100008314 Ga0070690_1000083145 899
81 3300005544 Ga0070686_100003351 Ga0070686_1000033514 899
82 3300006237 Ga0097621_100002990 Ga0097621_1000029904 899
83 3300006358 Ga0068871_100001696 Ga0068871_1000016968 899
84 3300006914 Ga0075436_100016238 Ga0075436_1000162383 901
85 3300035086 Ga0373934_0005043 Ga0373934_0005043_1304_4291 901
86 3300035111 Ga0373923_0000715 Ga0373923_0000715_1801_4788 901
87 3300035113 Ga0373936_0006148 Ga0373936_0006148_445_3432 901
88 3300035117 Ga0373953_0003785 Ga0373953_0003785_513_3500 901
89 3300035118 Ga0373954_0003515 Ga0373954_0003515_564_3551 901
90 3300035119 Ga0373956_0005899 Ga0373956_0005899_1245_4232 901
91 3300035120 Ga0373957_0006228 Ga0373957_0006228_250_3237 901
92 3300035172 Ga0373955_0005060 Ga0373955_0005060_2766_5753 901
93 3300035410 Ga0373924_0010448 Ga0373924_0010448_251_3238 901
94 3300046454 Ga0495592_0012567 Ga0495592_0012567_300_3287 901
95 3300046461 Ga0495641_0002872 Ga0495641_0002872_2326_5313 901
96 3300046462 Ga0495651_0001600 Ga0495651_0001600_12276_15263 901
97 3300046463 Ga0495653_0011537 Ga0495653_0011537_2121_5108 901
98 3300046473 Ga0495582_0007552 Ga0495582_0007552_1623_4610 901
99 3300046475 Ga0495639_0004318 Ga0495639_0004318_2443_5430 901
100 3300046476 Ga0495662_0016602 Ga0495662_0016602_436_3423 901
101 3300046511 Ga0495608_0019497 Ga0495608_0019497_513_3500 901
102 3300046514 Ga0495618_0008485 Ga0495618_0008485_3053_6040 901
103 3300046517 Ga0495630_0007741 Ga0495630_0007741_4591_7578 901
104 3300046529 Ga0495652_0021622 Ga0495652_0021622_2554_5541 901
105 3300046533 Ga0495640_0010267 Ga0495640_0010267_3779_6766 901
106 3300046536 Ga0495587_0021492 Ga0495587_0021492_480_3467 901
107 3300046642 Ga0495634_0003720 Ga0495634_0003720_1875_4862 901
108 3300046675 Ga0495657_0015677 Ga0495657_0015677_2181_5168 901
109 3300046678 Ga0495599_0004895 Ga0495599_0004895_2938_5925 901
110 3300046809 Ga0495600_0004915 Ga0495600_0004915_272_3259 901
111 3300047319 Ga0495674_0005529 Ga0495674_0005529_7662_10649 901
112 3300047322 Ga0495680_0004927 Ga0495680_0004927_7662_10649 901
113 3300047444 Ga0495675_0001531 Ga0495675_0001531_10463_13450 901
114 3300053077 Ga0495601_0028343 Ga0495601_0028343_370_3357 901
115 3300053084 Ga0495595_0002613 Ga0495595_0002613_1721_4708 901
116 3300053085 Ga0495619_0001844 Ga0495619_0001844_445_3432 901
117 3300035724 Ga0373933_0008888 Ga0373933_0008888_2213_5206 903
118 3300036401 Ga0373937_0026646 Ga0373937_0026646_248_3241 903
119 3300046511 Ga0495608_0032251 Ga0495608_0032251_198_3191 903
120 3300046517 Ga0495630_0038361 Ga0495630_0038361_237_3230 903
121 3300047317 Ga0495604_0037557 Ga0495604_0037557_446_3439 903
122 3300047471 Ga0495684_0043764 Ga0495684_0043764_111_3104 903
123 3300046681 Ga0495647_0003590 Ga0495647_0003590_1757_4744 905
124 3300013297 Ga0157378_10010650 Ga0157378_100106503 906
125 3300035724 Ga0373933_0008644 Ga0373933_0008644_1357_4410 906
126 3300006871 Ga0075434_100000784 Ga0075434_10000078419 909
127 3300007076 Ga0075435_100000429 Ga0075435_1000004292 909
128 3300049572 Ga0501036_0021307 Ga0501036_0021307_1121_4060 909
129 3300049575 Ga0501039_0000767 Ga0501039_0000767_7409_10348 909
130 3300049577 Ga0501041_0003243 Ga0501041_0003243_1287_4226 909
131 3300049579 Ga0501043_0016022 Ga0501043_0016022_2162_5101 909
132 3300049587 Ga0501071_0004223 Ga0501071_0004223_5845_8784 909
133 3300049591 Ga0501075_0013219 Ga0501075_0013219_2821_5760 909
134 3300049592 Ga0501076_0004383 Ga0501076_0004383_1682_4621 909
135 3300049593 Ga0501077_0004038 Ga0501077_0004038_3430_6369 909
136 3300049741 Ga0501079_0000879 Ga0501079_0000879_14528_17467 909
137 3300049742 Ga0501080_0018468 Ga0501080_0018468_1086_4025 909
138 3300049743 Ga0501081_0000160 Ga0501081_0000160_7388_10327 909
139 3300050512 nmdc:mga0n895_3499_c1 nmdc:mga0n895_3499_c1_9050_12004 909
140 3300050513 nmdc:mga0rr50_2558_c1 nmdc:mga0rr50_2558_c1_6971_9925 909
141 3300060353 Ga0501082_0000215 Ga0501082_0000215_15258_18197 909
142 3300042876 Ga0451577_0046689 Ga0451577_0046689_476_3457 910
143 3300044673 Ga0453683_0026244 Ga0453683_0026244_370_3351 910
144 3300044712 Ga0453684_0010231 Ga0453684_0010231_12945_15926 910
145 3300005458 Ga0070681_10047443 Ga0070681_100474433 911
146 3300005546 Ga0070696_100030016 Ga0070696_1000300162 913
147 3300006847 Ga0075431_100001787 Ga0075431_1000017872 913
148 3300049577 Ga0501041_0026252 Ga0501041_0026252_391_3423 918
149 3300006847 Ga0075431_100021640 Ga0075431_1000216403 919
150 3300006880 Ga0075429_100000003 Ga0075429_100000003109 919
151 3300027907 Ga0207428_10002108 Ga0207428_1000210810 919
152 3300049574 Ga0501038_0056769 Ga0501038_0056769_328_3285 919
153 3300050507 nmdc:mga05p37_976_c1 nmdc:mga05p37_976_c1_17513_20518 919
154 3300050508 nmdc:mga09592_355_c1 nmdc:mga09592_355_c1_18564_21569 919
155 3300050510 nmdc:mga06r32_1279_c1 nmdc:mga06r32_1279_c1_5646_8651 919
156 3300045051 Ga0451576_0000490 Ga0451576_0000490_68148_71111 921
157 3300005345 Ga0070692_10016672 Ga0070692_100166721 922
158 3300005444 Ga0070694_100025669 Ga0070694_1000256692 922
159 3300009094 Ga0111539_10001073 Ga0111539_1000107329 922
160 3300009176 Ga0105242_10001474 Ga0105242_1000147410 922
161 3300035118 Ga0373954_0004325 Ga0373954_0004325_660_3608 922
162 3300038726 Ga0400490_03529 Ga0400490_03529_2094_5069 922
163 3300049742 Ga0501080_0009588 Ga0501080_0009588_652_3642 922
164 3300035086 Ga0373934_0000092 Ga0373934_0000092_27930_30884 923
165 3300035119 Ga0373956_0000029 Ga0373956_0000029_38769_41723 923
166 3300035172 Ga0373955_0001079 Ga0373955_0001079_731_3685 923
167 3300035724 Ga0373933_0001487 Ga0373933_0001487_2776_5730 923
168 3300044673 Ga0453683_0000012 Ga0453683_0000012_233105_236074 923
169 3300049571 Ga0501034_0003219 Ga0501034_0003219_827_3811 923
170 3300049588 Ga0501072_0029284 Ga0501072_0029284_956_3940 923
171 3300035118 Ga0373954_0001910 Ga0373954_0001910_1504_4464 924
172 3300035725 Ga0373947_0021135 Ga0373947_0021135_165_3122 924
173 3300045051 Ga0451576_0000026 Ga0451576_0000026_208494_211463 924
174 3300049577 Ga0501041_0027748 Ga0501041_0027748_362_3319 924
175 3300005330 Ga0070690_100000352 Ga0070690_1000003528 925
176 3300005334 Ga0068869_100000512 Ga0068869_1000005128 925
177 3300005336 Ga0070680_100001459 Ga0070680_1000014598 925
178 3300005338 Ga0068868_100000262 Ga0068868_10000026211 925
179 3300005340 Ga0070689_100003157 Ga0070689_1000031573 925
180 3300005341 Ga0070691_10004014 Ga0070691_100040144 925
181 3300005345 Ga0070692_10006581 Ga0070692_100065813 925
182 3300005438 Ga0070701_10000307 Ga0070701_1000030712 925
183 3300005440 Ga0070705_100000343 Ga0070705_10000034319 925
184 3300005441 Ga0070700_100000230 Ga0070700_10000023021 925
185 3300005444 Ga0070694_100000253 Ga0070694_1000002538 925
186 3300005459 Ga0068867_100002103 Ga0068867_1000021037 925
187 3300005544 Ga0070686_100000370 Ga0070686_10000037020 925
188 3300005545 Ga0070695_100000423 Ga0070695_1000004238 925
189 3300005546 Ga0070696_100000073 Ga0070696_10000007331 925
190 3300005547 Ga0070693_100000443 Ga0070693_1000004438 925
191 3300005549 Ga0070704_100001092 Ga0070704_1000010927 925
192 3300005563 Ga0068855_100004746 Ga0068855_1000047467 925
193 3300005615 Ga0070702_100001247 Ga0070702_1000012474 925
194 3300005617 Ga0068859_100001384 Ga0068859_1000013843 925
195 3300005718 Ga0068866_10000217 Ga0068866_1000021719 925
196 3300005719 Ga0068861_100000311 Ga0068861_1000003118 925
197 3300005842 Ga0068858_100003054 Ga0068858_1000030542 925
198 3300005843 Ga0068860_100001142 Ga0068860_1000011428 925
199 3300005844 Ga0068862_100001915 Ga0068862_1000019158 925
200 3300006237 Ga0097621_100002277 Ga0097621_1000022777 925
201 3300006358 Ga0068871_100000331 Ga0068871_10000033124 925
202 3300006846 Ga0075430_100005926 Ga0075430_1000059262 925
203 3300006881 Ga0068865_100000456 Ga0068865_10000045614 925
204 3300006931 Ga0097620_100001384 Ga0097620_1000013843 925
205 3300009098 Ga0105245_10000576 Ga0105245_100005768 925
206 3300009148 Ga0105243_10000974 Ga0105243_1000097419 925
207 3300009176 Ga0105242_10003211 Ga0105242_100032117 925
208 3300009553 Ga0105249_10005297 Ga0105249_100052978 925
209 3300013297 Ga0157378_10000814 Ga0157378_1000081420 925
210 3300014969 Ga0157376_10001072 Ga0157376_1000107212 925
211 3300025917 Ga0207660_10001194 Ga0207660_1000119410 925
212 3300025918 Ga0207662_10000112 Ga0207662_1000011240 925
213 3300025927 Ga0207687_10016961 Ga0207687_100169612 925
214 3300025935 Ga0207709_10002770 Ga0207709_100027708 925
215 3300025936 Ga0207670_10002135 Ga0207670_100021358 925
216 3300025938 Ga0207704_10000301 Ga0207704_1000030120 925
217 3300025942 Ga0207689_10001636 Ga0207689_100016368 925
218 3300025949 Ga0207667_10011562 Ga0207667_100115622 925
219 3300025961 Ga0207712_10010145 Ga0207712_100101454 925
220 3300026023 Ga0207677_10000537 Ga0207677_1000053715 925
221 3300026035 Ga0207703_10003759 Ga0207703_100037599 925
222 3300026075 Ga0207708_10001056 Ga0207708_100010568 925
223 3300026089 Ga0207648_10000205 Ga0207648_1000020525 925
224 3300026118 Ga0207675_100000851 Ga0207675_1000008518 925
225 3300028380 Ga0268265_10002780 Ga0268265_1000278010 925
226 3300028381 Ga0268264_10001774 Ga0268264_100017746 925
227 3300036401 Ga0373937_0004813 Ga0373937_0004813_2252_5209 925
228 3300042876 Ga0451577_0007401 Ga0451577_0007401_7517_10513 925
229 3300044712 Ga0453684_0000281 Ga0453684_0000281_216317_219313 925
230 3300049578 Ga0501042_0022660 Ga0501042_0022660_1272_4232 925
231 3300049580 Ga0501046_0005604 Ga0501046_0005604_7411_10371 925
232 3300049587 Ga0501071_0005450 Ga0501071_0005450_4886_7846 925
233 3300049588 Ga0501072_0003663 Ga0501072_0003663_7656_10616 925
234 3300050509 nmdc:mga0qj67_3867_c1 nmdc:mga0qj67_3867_c1_5833_8796 925
235 3300061734 Ga0530510_0034719 Ga0530510_0034719_618_3578 925
236 3300044712 Ga0453684_0001277 Ga0453684_0001277_36238_39276 926
237 3300006846 Ga0075430_100016113 Ga0075430_1000161134 927
238 3300006847 Ga0075431_100078799 Ga0075431_1000787992 927
239 3300041410 Ga0439461_0000569 Ga0439461_0000569_845_3814 927
240 3300042436 Ga0439435_0000030 Ga0439435_0000030_3382_6351 927
241 3300049570 Ga0501033_0022270 Ga0501033_0022270_242_3208 927
242 3300049572 Ga0501036_0000101 Ga0501036_0000101_31010_33976 927
243 3300049573 Ga0501037_0021476 Ga0501037_0021476_717_3683 927
244 3300049574 Ga0501038_0001381 Ga0501038_0001381_2972_5938 927
245 3300049575 Ga0501039_0000117 Ga0501039_0000117_31992_34958 927
246 3300049576 Ga0501040_0003368 Ga0501040_0003368_1689_4655 927
247 3300049577 Ga0501041_0000040 Ga0501041_0000040_10698_13664 927
248 3300049578 Ga0501042_0000026 Ga0501042_0000026_31618_34584 927
249 3300049579 Ga0501043_0003448 Ga0501043_0003448_8426_11392 927
250 3300049580 Ga0501046_0000705 Ga0501046_0000705_3653_6619 927
251 3300049582 Ga0501048_0014211 Ga0501048_0014211_2231_5197 927
252 3300049587 Ga0501071_0000133 Ga0501071_0000133_22491_25457 927
253 3300049588 Ga0501072_0000528 Ga0501072_0000528_13371_16337 927
254 3300049590 Ga0501074_0017163 Ga0501074_0017163_1731_4697 927
255 3300049591 Ga0501075_0000036 Ga0501075_0000036_22275_25241 927
256 3300049592 Ga0501076_0000220 Ga0501076_0000220_4584_7550 927
257 3300049593 Ga0501077_0000855 Ga0501077_0000855_11246_14212 927
258 3300049741 Ga0501079_0000807 Ga0501079_0000807_7704_10670 927
259 3300049743 Ga0501081_0000074 Ga0501081_0000074_22737_25703 927
260 3300049743 Ga0501081_0014374 Ga0501081_0014374_1517_4483 927
261 3300049823 Ga0501044_0046616 Ga0501044_0046616_621_3587 927
262 3300049824 Ga0501045_0000438 Ga0501045_0000438_11991_14957 927
263 3300050507 nmdc:mga05p37_12883_c1 nmdc:mga05p37_12883_c1_5784_8750 927
264 3300050510 nmdc:mga06r32_42720_c1 nmdc:mga06r32_42720_c1_879_3845 927
265 3300060353 Ga0501082_0000619 Ga0501082_0000619_13783_16749 927
266 3300061734 Ga0530510_0000117 Ga0530510_0000117_31527_34493 927
267 3300005536 Ga0070697_100001109 Ga0070697_10000110914 928
268 3300042435 Ga0439434_0000446 Ga0439434_0000446_2880_5897 928
269 3300042436 Ga0439435_0000009 Ga0439435_0000009_2958_5975 928
270 3300009094 Ga0111539_10001073 Ga0111539_1000107328 929
271 3300026088 Ga0207641_10025037 Ga0207641_100250373 929
272 3300027907 Ga0207428_10002108 Ga0207428_1000210811 929
273 3300031456 Ga0307513_10066022 Ga0307513_100660222 929
274 3300044712 Ga0453684_0009820 Ga0453684_0009820_8935_11925 929
275 3300044712 Ga0453684_0025555 Ga0453684_0025555_1453_4443 929
276 3300050511 nmdc:mga08y16_11063_c1 nmdc:mga08y16_11063_c1_5347_8331 929
277 3300005444 Ga0070694_100008113 Ga0070694_1000081131 930
278 3300006844 Ga0075428_100015062 Ga0075428_1000150623 930
279 3300009094 Ga0111539_10005067 Ga0111539_1000506710 930
280 3300027907 Ga0207428_10003365 Ga0207428_1000336510 930
281 3300036401 Ga0373937_0000233 Ga0373937_0000233_9423_12374 930
282 3300046462 Ga0495651_0000178 Ga0495651_0000178_40610_43561 930
283 3300050511 nmdc:mga08y16_3067_c1 nmdc:mga08y16_3067_c1_6487_9459 930
284 3300009147 Ga0114129_10007217 Ga0114129_100072172 932
285 3300044712 Ga0453684_0086554 Ga0453684_0086554_69_3059 932
286 3300049743 Ga0501081_0002137 Ga0501081_0002137_8724_11804 932
287 3300049824 Ga0501045_0041655 Ga0501045_0041655_224_3304 932
288 3300059421 Ga0590071_003775 Ga0590071_003775_627_3701 932
289 3300006847 Ga0075431_100026646 Ga0075431_1000266462 933
290 3300035724 Ga0373933_0002481 Ga0373933_0002481_1187_4147 933
291 3300046462 Ga0495651_0002367 Ga0495651_0002367_11257_14211 933
292 3300046463 Ga0495653_0027606 Ga0495653_0027606_943_3897 933
293 3300046514 Ga0495618_0019807 Ga0495618_0019807_68_3022 933
294 3300046517 Ga0495630_0001696 Ga0495630_0001696_3240_6194 933
295 3300046531 Ga0495665_0011739 Ga0495665_0011739_433_3387 933
296 3300050510 nmdc:mga06r32_24155_c1 nmdc:mga06r32_24155_c1_59_3037 933
297 3300005438 Ga0070701_10001019 Ga0070701_100010194 934
298 3300005441 Ga0070700_100007137 Ga0070700_1000071373 934
299 3300006173 Ga0070716_100010078 Ga0070716_1000100783 934
300 3300026075 Ga0207708_10014052 Ga0207708_100140522 934
301 3300046516 Ga0495628_0012241 Ga0495628_0012241_1854_4811 934
302 3300053077 Ga0495601_0001071 Ga0495601_0001071_10565_13522 934
303 3300005985 Ga0081539_10000004 Ga0081539_10000004150 935
304 3300006852 Ga0075433_10018143 Ga0075433_100181432 935
305 3300039110 Ga0400487_40193 Ga0400487_40193_62_3058 935
306 3300047318 Ga0495636_0001867 Ga0495636_0001867_1578_4541 935
307 3300050515 nmdc:mga0a205_18977_c1 nmdc:mga0a205_18977_c1_1751_4801 935
308 3300009094 Ga0111539_10032660 Ga0111539_100326603 937
309 3300009147 Ga0114129_10035845 Ga0114129_100358454 937
310 3300044673 Ga0453683_0028300 Ga0453683_0028300_386_3451 937
311 3300049575 Ga0501039_0000129 Ga0501039_0000129_5431_8454 937
312 3300049576 Ga0501040_0001539 Ga0501040_0001539_5272_8295 937
313 3300049577 Ga0501041_0000048 Ga0501041_0000048_22429_25452 937
314 3300049582 Ga0501048_0001332 Ga0501048_0001332_10616_13639 937
315 3300049582 Ga0501048_0006833 Ga0501048_0006833_5613_8636 937
316 3300049588 Ga0501072_0008146 Ga0501072_0008146_3410_6433 937
317 3300049591 Ga0501075_0001062 Ga0501075_0001062_5539_8562 937
318 3300049592 Ga0501076_0001309 Ga0501076_0001309_5587_8610 937
319 3300049741 Ga0501079_0001228 Ga0501079_0001228_1550_4573 937
320 3300049741 Ga0501079_0022470 Ga0501079_0022470_1532_4555 937
321 3300049743 Ga0501081_0001002 Ga0501081_0001002_8285_11308 937
322 3300049824 Ga0501045_0000203 Ga0501045_0000203_5624_8647 937
323 3300054114 Ga0501084_0000408 Ga0501084_0000408_16051_19074 937
324 3300060353 Ga0501082_0003041 Ga0501082_0003041_5312_8335 937
325 3300060353 Ga0501082_0007376 Ga0501082_0007376_3993_7016 937
326 3300005842 Ga0068858_100015029 Ga0068858_1000150292 938
327 3300006358 Ga0068871_100010333 Ga0068871_1000103334 938
328 3300009094 Ga0111539_10042819 Ga0111539_100428191 939
329 3300014325 Ga0163163_10033665 Ga0163163_100336652 939
330 3300027462 Ga0210000_1001384 Ga0210000_10013842 939
331 3300035691 Ga0373931_0000108 Ga0373931_0000108_21513_24479 939
332 3300044673 Ga0453683_0001746 Ga0453683_0001746_283_3306 939
333 3300045051 Ga0451576_0020726 Ga0451576_0020726_351_3317 939
334 3300050507 nmdc:mga05p37_10630_c1 nmdc:mga05p37_10630_c1_125_3091 939
335 3300050508 nmdc:mga09592_10_c1 nmdc:mga09592_10_c1_44212_47178 939
336 3300050511 nmdc:mga08y16_2521_c1 nmdc:mga08y16_2521_c1_15615_18581 939
337 3300049577 Ga0501041_0003178 Ga0501041_0003178_3262_6336 941
338 3300049591 Ga0501075_0000204 Ga0501075_0000204_11374_14448 941
339 3300049592 Ga0501076_0001733 Ga0501076_0001733_3821_6895 941
340 3300049743 Ga0501081_0008051 Ga0501081_0008051_3589_6663 941
341 3300060353 Ga0501082_0005685 Ga0501082_0005685_5473_8547 941
342 3300061734 Ga0530510_0000257 Ga0530510_0000257_22993_26067 941
343 3300046472 Ga0495580_0020152 Ga0495580_0020152_817_3846 942
344 3300060353 Ga0501082_0015417 Ga0501082_0015417_1803_4877 946
345 3300003792 Ga0055540_1001161 Ga0055540_100116115 974
346 3300003794 Ga0055531_10000211 Ga0055531_1000021141 974
347 3300025303 Ga0209051_1000115 Ga0209051_100011580 974
348 3300025304 Ga0209257_1000055 Ga0209257_1000055115 974

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01564

Spermine_synth

Spermine/spermidine synthase domain

568

727

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xj5-assembly1.cif.gz_C x-ray structure of spermidine synthase from arabidopsis thaliana gene at1g23820 0.8713 457 680
6o64-assembly3.cif.gz_E crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) 0.8706 457 682
6o64-assembly2.cif.gz_D crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) 0.8625 457 682
6o63-assembly1.cif.gz_A crystal structure of arabidopsis thaliana spermidine synthase isoform 1 (atspds1) 0.8622 457 682
6o64-assembly2.cif.gz_C crystal structure of arabidopsis thaliana spermidine synthase isoform 2 (atspds2) 0.8603 454 682
ID Description Score Start End Superfamily
1jq3D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9 503 673 3.40.50.150
af_Q4CXJ6_69_296_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.887 501 678 3.40.50.150
af_B4E3X6_90_272_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8625 503 678 3.40.50.150
af_Q5AL17_111_343_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8491 503 678 3.40.50.150
af_Q57761_62_290_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8452 502 688 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A3C0TDG8-F1-model_v4 Spermidine synthase 0.9784 525 638 GO:0006596
GO:0016740
AF-A0A3C0TDG8-F1-model_v4 Spermidine synthase 0.9617 525 638 GO:0006596
GO:0016740
AF-X0Y7N1-F1-model_v4 PABS domain-containing protein 0.9297 506 687 GO:0006596
AF-A0A7W1PUN8-F1-model_v4 Fused MFS/spermidine synthase 0.9198 228 416 GO:0016020
AF-A0A7V4T4Z8-F1-model_v4 Spermidine synthase (EC 2.5.1.16) 0.9178 457 631 GO:0004766
GO:0005829
GO:0008295

Feature Viewer

pLDDT pTM Quality
81.08 0.81 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map