F417361

General Info

Members Datasets Scaffolds Average Seq Length
348 233 696 245

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10064921|rootH1_100649215
Length 246
Sequence MKIVVVGGTGRIGSQVVGLLEANGHEAVAAAPSTGVDTLTGEGLTEVLKGADVVVDVANSPSFEKEAALDFFTRAMRNLTAAEREAGVRHHVALSIIGVDQVPGLGYYLAKVAQEDAVRASGVPFTIVRVAQFFEFVAPVMDLTTQGRDVHLPSTQLRPIAAAEVAAVVAEAAQGSPVNGLRQLAGPEIHRLDRLAELTLAARPDGRRVVTDESAGMFAGIPDGVLTGDATVPTARTRYEDWLKRG

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300009986 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_92 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
35 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
36 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
38 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
41 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
42 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
44 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
65 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
66 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
67 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
68 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
69 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
70 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
71 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
72 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
73 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
74 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
75 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
76 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
77 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
78 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
79 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
83 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
84 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
85 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
86 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
87 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
94 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
95 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
96 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
97 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
98 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
99 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
100 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
101 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
102 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
103 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
104 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
105 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
106 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
107 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
108 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
117 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
118 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
119 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
120 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
121 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
122 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
123 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
128 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
129 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
130 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
131 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
132 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
133 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
134 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
141 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
142 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
146 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
147 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
148 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
149 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
152 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
153 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
154 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
157 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
158 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
159 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
160 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
161 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
162 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
165 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
166 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
167 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
170 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
171 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
172 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
173 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
174 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
175 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
176 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
184 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
186 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
187 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
188 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
189 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
190 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
191 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
192 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
193 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
194 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
195 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
196 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
197 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
198 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
199 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
200 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
201 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
202 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
203 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
204 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
205 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
206 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
207 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
208 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
209 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
210 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
211 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
212 2858882152 Micromonospora noduli MED15 Isolate Nodule
213 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
214 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
215 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
216 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
217 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
218 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
219 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
220 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
221 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
222 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
223 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
224 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
225 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
226 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
227 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
228 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
229 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
230 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
231 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
232 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
233 8054734606 Micromonospora hortensis NIE111 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 87.07
Metatranscriptomes 2.87
Isolates 10.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.01
Nodule 1.44
Rhizoplane 3.45
Rhizosphere 82.76
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10064921 3300003316 Bacteria 5635
2 JGI24737J22298_10030441 3300001990 Bacteria 1689
3 JGI24735J21928_10022156 3300002067 Bacteria 1937
4 JGI25406J46586_10012078 3300003203 Bacteria 3762
5 rootH1_10039166 3300003323 Bacteria 3716
6 Ga0070683_100005769 3300005329 Bacteria 10349
7 Ga0070683_100074159 3300005329 Bacteria 3178
8 Ga0070683_100186338 3300005329 Bacteria 1970
9 Ga0070667_100007268 3300005367 Bacteria 9205
10 Ga0070713_100691616 3300005436 Bacteria 973
11 Ga0070708_100034904 3300005445 Bacteria 4379
12 Ga0070681_10030297 3300005458 Bacteria 5429
13 Ga0070681_10087022 3300005458 Bacteria 3078
14 Ga0070681_10339790 3300005458 Bacteria 1411
15 Ga0070681_10461063 3300005458 Bacteria 1183
16 Ga0070685_10185039 3300005466 Bacteria 1344
17 Ga0070707_100441059 3300005468 Bacteria 1262
18 Ga0070679_100035659 3300005530 Bacteria 4935
19 Ga0070679_100299434 3300005530 Bacteria 1559
20 Ga0070684_100003627 3300005535 Bacteria 11627
21 Ga0070684_100026607 3300005535 Bacteria 4875
22 Ga0070684_100240675 3300005535 Bacteria 1653
23 Ga0070684_100385214 3300005535 Bacteria 1292
24 Ga0070665_100090248 3300005548 Bacteria 3070
25 Ga0070664_100005799 3300005564 Bacteria 9965
26 Ga0068857_100752447 3300005577 Bacteria 928
27 Ga0068854_100556091 3300005578 Bacteria 974
28 Ga0068856_100738165 3300005614 Bacteria 1005
29 Ga0068863_100009472 3300005841 Bacteria 9499
30 Ga0068858_100045248 3300005842 Bacteria 4078
31 Ga0068860_100072311 3300005843 Bacteria 3277
32 Ga0081540_1024807 3300005983 Bacteria 3469
33 Ga0081539_10015319 3300005985 Bacteria 5582
34 Ga0070717_10050960 3300006028 Bacteria 3405
35 Ga0075363_100017582 3300006048 Bacteria 3548
36 Ga0105251_10013067 3300009011 Bacteria 4663
37 Ga0105248_10123857 3300009177 Bacteria 2916
38 Ga0105033_101099 3300009986 Bacteria 2179
39 Ga0157370_10016035 3300013104 Bacteria 7599
40 Ga0157369_10036400 3300013105 Bacteria 5392
41 Ga0157369_10483066 3300013105 Bacteria 1282
42 Ga0157369_10823805 3300013105 Bacteria 953
43 Ga0157374_10321954 3300013296 Bacteria 1532
44 Ga0157372_10779185 3300013307 Bacteria 1112
45 Ga0163163_10017123 3300014325 Bacteria 6751
46 Ga0163163_10024411 3300014325 Bacteria 5754
47 Ga0157379_10112993 3300014968 Bacteria 2441
48 Ga0206351_10257618 3300020077 Bacteria 1376
49 Ga0206351_10439284 3300020077 Bacteria 1249
50 Ga0206350_10192266 3300020080 Bacteria 1279
51 Ga0206350_11171516 3300020080 Bacteria 1395
52 Ga0206354_10488438 3300020081 Bacteria 2310
53 Ga0206354_10952112 3300020081 Bacteria 1844
54 Ga0206353_11722827 3300020082 Bacteria 1514
55 Ga0206353_11873431 3300020082 Bacteria 2668
56 Ga0213873_10000040 3300021358 Bacteria 32068
57 Ga0213876_10047504 3300021384 Bacteria 2269
58 Ga0224712_10079698 3300022467 Bacteria 1349
59 Ga0224712_10081290 3300022467 Bacteria 1338
60 Ga0209758_1003133 3300025297 Bacteria 15606
61 Ga0207713_1050034 3300025735 Bacteria 1671
62 Ga0207692_10067276 3300025898 Bacteria 1875
63 Ga0207647_10021001 3300025904 Bacteria 4366
64 Ga0207684_10048654 3300025910 Bacteria 3596
65 Ga0207684_10140104 3300025910 Bacteria 2079
66 Ga0207684_10737826 3300025910 Bacteria 835
67 Ga0207707_10071672 3300025912 Bacteria 3020
68 Ga0207707_10262022 3300025912 Bacteria 1500
69 Ga0207707_10392493 3300025912 Bacteria 1192
70 Ga0207660_10003993 3300025917 Bacteria 9618
71 Ga0207660_10336226 3300025917 Bacteria 1208
72 Ga0207652_10023970 3300025921 Bacteria 5062
73 Ga0207652_10444008 3300025921 Bacteria 1169
74 Ga0207646_10033352 3300025922 Bacteria 4659
75 Ga0207646_10339440 3300025922 Bacteria 1357
76 Ga0207700_10101956 3300025928 Bacteria 2291
77 Ga0207700_10261193 3300025928 Bacteria 1483
78 Ga0207664_10345507 3300025929 Bacteria 1316
79 Ga0207661_10017616 3300025944 Bacteria 5291
80 Ga0207661_10066967 3300025944 Bacteria 2919
81 Ga0207661_10265535 3300025944 Bacteria 1530
82 Ga0207679_10006192 3300025945 Bacteria 7553
83 Ga0207668_10790742 3300025972 Bacteria 839
84 Ga0207703_10008110 3300026035 Bacteria 8302
85 Ga0207641_10300181 3300026088 Bacteria 1517
86 Ga0207674_10465184 3300026116 Bacteria 1222
87 Ga0268266_10535615 3300028379 Bacteria 1121
88 Ga0268264_10106618 3300028381 Bacteria 2446
89 Ga0307515_10004604 3300028794 Bacteria 28368
90 Ga0307515_10096963 3300028794 Bacteria 3609
91 Ga0265338_10004132 3300028800 Bacteria 19860
92 Ga0265338_10137307 3300028800 Bacteria 1920
93 Ga0307512_10003136 3300030522 Bacteria 19661
94 Ga0307512_10009718 3300030522 Bacteria 9241
95 Ga0265332_10186684 3300031238 Bacteria 863
96 Ga0265328_10001480 3300031239 Bacteria 10827
97 Ga0265320_10001309 3300031240 Bacteria 18195
98 Ga0265320_10006305 3300031240 Bacteria 7496
99 Ga0265339_10005096 3300031249 Bacteria 8824
100 Ga0265339_10009692 3300031249 Bacteria 6023
101 Ga0307513_10003373 3300031456 Bacteria 21696
102 Ga0307513_10030349 3300031456 Bacteria 6142
103 Ga0307513_10501311 3300031456 Bacteria 931
104 Ga0307509_10062922 3300031507 Bacteria 3910
105 Ga0307508_10028239 3300031616 Bacteria 5074
106 Ga0265314_10025621 3300031711 Bacteria 4445
107 Ga0265314_10058131 3300031711 Bacteria 2651
108 Ga0265342_10000508 3300031712 Bacteria 41617
109 Ga0265342_10004078 3300031712 Bacteria 11648
110 Ga0307516_10010275 3300031730 Bacteria 10310
111 Ga0307516_10047328 3300031730 Bacteria 4238
112 Ga0307516_10108239 3300031730 Bacteria 2587
113 Ga0307405_10101680 3300031731 Bacteria 1929
114 Ga0307405_10338503 3300031731 Bacteria 1156
115 Ga0307410_10143649 3300031852 Bacteria 1769
116 Ga0326468_10000156 3300031889 Bacteria 6669
117 Ga0307406_10182331 3300031901 Bacteria 1529
118 Ga0307407_10007993 3300031903 Bacteria 4825
119 Ga0307407_10032064 3300031903 Bacteria 2853
120 Ga0307409_100061355 3300031995 Bacteria 2938
121 Ga0307409_100085542 3300031995 Bacteria 2563
122 Ga0307416_100019467 3300032002 Bacteria 4813
123 Ga0307416_100731283 3300032002 Bacteria 1081
124 Ga0307416_100765360 3300032002 Bacteria 1059
125 Ga0307416_100820593 3300032002 Bacteria 1027
126 Ga0307411_10051625 3300032005 Bacteria 2684
127 Ga0307415_100030757 3300032126 Bacteria 3450
128 Ga0307415_100783452 3300032126 Bacteria 869
129 Ga0307507_10020421 3300033179 Bacteria 7418
130 Ga0307507_10059198 3300033179 Bacteria 3589
131 Ga0307510_10362978 3300033180 Bacteria 896
132 Ga0373951_0000010 3300035091 Bacteria 76713
133 Ga0373956_0002237 3300035119 Bacteria 7969
134 Ga0373927_0248695 3300035695 Bacteria 1169
135 Ga0395900_0451263 3300037418 Bacteria 1242
136 Ga0395898_0097934 3300037466 Bacteria 2816
137 Ga0395905_0335076 3300037471 Bacteria 1404
138 Ga0436362_0604286 3300039453 Bacteria 27368
139 Ga0439449_0099487 3300042007 Bacteria 1074
140 Ga0439455_0019513 3300042012 Bacteria 1599
141 Ga0450903_005988 3300042138 Bacteria 2028
142 Ga0439458_0001731 3300042157 Bacteria 5451
143 Ga0466972_0026585 3300044658 Bacteria 2868
144 Ga0466965_0000538 3300044683 Bacteria 13659
145 Ga0466966_0003273 3300044684 Bacteria 10675
146 Ga0466966_0008442 3300044684 Bacteria 6817
147 Ga0466963_0003039 3300044694 Bacteria 9496
148 Ga0466963_0008641 3300044694 Bacteria 6112
149 Ga0466963_0019035 3300044694 Bacteria 4299
150 Ga0466963_0041391 3300044694 Bacteria 3022
151 Ga0466964_0026929 3300044706 Bacteria 2253
152 Ga0466971_0032916 3300044719 Bacteria 2322
153 Ga0466968_0190740 3300044735 Bacteria 956
154 Ga0466968_0200209 3300044735 Bacteria 935
155 Ga0466970_0002168 3300044765 Bacteria 9478
156 Ga0466957_0000882 3300044842 Bacteria 15377
157 Ga0466957_0004497 3300044842 Bacteria 7780
158 Ga0466959_0001792 3300045049 Bacteria 13424
159 Ga0466959_0048199 3300045049 Bacteria 3131
160 Ga0466958_0001716 3300045836 Bacteria 10580
161 Ga0466958_0004082 3300045836 Bacteria 7663
162 Ga0466967_0034023 3300045976 Bacteria 4320
163 Ga0466967_0124316 3300045976 Bacteria 2388
164 Ga0466967_0267758 3300045976 Bacteria 1636
165 Ga0466967_0472348 3300045976 Bacteria 1228
166 Ga0495592_0059192 3300046454 Bacteria 2822
167 Ga0495592_0135327 3300046454 Bacteria 1719
168 Ga0495603_0018340 3300046455 Bacteria 4233
169 Ga0495603_0183522 3300046455 Bacteria 1210
170 Ga0495629_0000765 3300046459 Bacteria 25909
171 Ga0495629_0363198 3300046459 Bacteria 986
172 Ga0495638_0073938 3300046460 Bacteria 2079
173 Ga0495638_0341010 3300046460 Bacteria 794
174 Ga0495651_0001163 3300046462 Bacteria 20322
175 Ga0495651_0023447 3300046462 Bacteria 4797
176 Ga0495651_0379376 3300046462 Bacteria 927
177 Ga0495653_0124596 3300046463 Bacteria 1831
178 Ga0495580_0165785 3300046472 Bacteria 1528
179 Ga0495662_0003716 3300046476 Bacteria 7689
180 Ga0495664_0020034 3300046477 Bacteria 3853
181 Ga0495594_0001639 3300046499 Bacteria 11653
182 Ga0495583_0050022 3300046506 Bacteria 1911
183 Ga0495608_0006766 3300046511 Bacteria 8129
184 Ga0495618_0005200 3300046514 Bacteria 7952
185 Ga0495618_0006641 3300046514 Bacteria 7010
186 Ga0495618_0102246 3300046514 Bacteria 1834
187 Ga0495620_0001023 3300046515 Bacteria 17198
188 Ga0495628_0041675 3300046516 Bacteria 3665
189 Ga0495628_0105277 3300046516 Bacteria 2173
190 Ga0495628_0253996 3300046516 Bacteria 1311
191 Ga0495630_0025931 3300046517 Bacteria 4337
192 Ga0495630_0252610 3300046517 Bacteria 1347
193 Ga0495631_0172607 3300046518 Bacteria 927
194 Ga0495643_0002161 3300046522 Bacteria 16127
195 Ga0495666_0012924 3300046526 Bacteria 4160
196 Ga0495652_0000362 3300046529 Bacteria 54176
197 Ga0495652_0026567 3300046529 Bacteria 5112
198 Ga0495640_0009948 3300046533 Bacteria 7372
199 Ga0495640_0012807 3300046533 Bacteria 6400
200 Ga0495640_0014873 3300046533 Bacteria 5870
201 Ga0495586_0016795 3300046535 Bacteria 3895
202 Ga0495587_0004895 3300046536 Bacteria 8782
203 Ga0495587_0016233 3300046536 Bacteria 4635
204 Ga0495587_0160086 3300046536 Bacteria 1281
205 Ga0495597_0063450 3300046542 Bacteria 1605
206 Ga0495645_0104817 3300046543 Bacteria 2007
207 Ga0495645_0160304 3300046543 Bacteria 1556
208 Ga0495622_0004870 3300046557 Bacteria 6217
209 Ga0495667_0009764 3300046559 Bacteria 6502
210 Ga0495668_0095050 3300046616 Bacteria 1631
211 Ga0495634_0010944 3300046642 Bacteria 6620
212 Ga0495634_0015156 3300046642 Bacteria 5541
213 Ga0495634_0024469 3300046642 Bacteria 4236
214 Ga0495634_0273051 3300046642 Bacteria 1029
215 Ga0495611_0094112 3300046648 Bacteria 1386
216 Ga0495625_0153048 3300046660 Bacteria 1549
217 Ga0495635_0007971 3300046663 Bacteria 7406
218 Ga0495635_0042596 3300046663 Bacteria 3134
219 Ga0495588_0006500 3300046674 Bacteria 5269
220 Ga0495588_0007403 3300046674 Bacteria 4993
221 Ga0495588_0087913 3300046674 Bacteria 1626
222 Ga0495657_0000583 3300046675 Bacteria 33423
223 Ga0495657_0002488 3300046675 Bacteria 15491
224 Ga0495657_0008080 3300046675 Bacteria 8068
225 Ga0495657_0015175 3300046675 Bacteria 5642
226 Ga0495599_0019547 3300046678 Bacteria 4222
227 Ga0495623_0026224 3300046679 Bacteria 3752
228 Ga0495623_0043623 3300046679 Bacteria 2853
229 Ga0495646_0033338 3300046680 Bacteria 3201
230 Ga0495613_0001226 3300046689 Bacteria 19608
231 Ga0495613_0003487 3300046689 Bacteria 11770
232 Ga0495613_0004809 3300046689 Bacteria 10134
233 Ga0495613_0189817 3300046689 Bacteria 1452
234 Ga0495624_0080646 3300046690 Bacteria 2016
235 Ga0495671_0252137 3300046692 Bacteria 852
236 Ga0495589_0010357 3300046794 Bacteria 4841
237 Ga0495589_0040881 3300046794 Bacteria 2314
238 Ga0495600_0000678 3300046809 Bacteria 17748
239 Ga0495600_0042942 3300046809 Bacteria 2947
240 Ga0495660_0117086 3300046810 Bacteria 1352
241 Ga0495581_0023977 3300047315 Bacteria 3535
242 Ga0495604_0004151 3300047317 Bacteria 11503
243 Ga0495604_0028894 3300047317 Bacteria 4411
244 Ga0495604_0034394 3300047317 Bacteria 4008
245 Ga0495604_0137796 3300047317 Bacteria 1747
246 Ga0495636_0001831 3300047318 Bacteria 8132
247 Ga0495636_0063692 3300047318 Bacteria 1563
248 Ga0495674_0041853 3300047319 Bacteria 4089
249 Ga0495672_0033953 3300047320 Bacteria 3157
250 Ga0495676_0004136 3300047321 Bacteria 13226
251 Ga0495676_0009620 3300047321 Bacteria 8796
252 Ga0495676_0010573 3300047321 Bacteria 8359
253 Ga0495676_0014849 3300047321 Bacteria 6953
254 Ga0495676_0092789 3300047321 Bacteria 2253
255 Ga0495680_0006642 3300047322 Bacteria 10712
256 Ga0495680_0225530 3300047322 Bacteria 1336
257 Ga0495683_0132595 3300047323 Bacteria 1174
258 Ga0495683_0202164 3300047323 Bacteria 895
259 Ga0495687_014506 3300047443 Bacteria 4052
260 Ga0495675_0063020 3300047444 Bacteria 2346
261 Ga0495675_0255849 3300047444 Bacteria 1050
262 Ga0495685_025884 3300047447 Bacteria 2019
263 Ga0495685_031754 3300047447 Bacteria 1814
264 Ga0495684_0032255 3300047471 Bacteria 4020
265 Ga0495593_0003455 3300047673 Bacteria 9467
266 Ga0495593_0003493 3300047673 Bacteria 9405
267 Ga0495593_0064078 3300047673 Bacteria 1918
268 Ga0495593_0178441 3300047673 Bacteria 1070
269 Ga0495602_0037775 3300048088 Bacteria 4475
270 Ga0495602_0138823 3300048088 Bacteria 1927
271 Ga0495614_0000979 3300048089 Bacteria 12148
272 Ga0495614_0056505 3300048089 Bacteria 1684
273 Ga0495614_0091923 3300048089 Bacteria 1320
274 Ga0495626_0085563 3300048091 Bacteria 1394
275 Ga0496104_0925880 3300048907 Bacteria 776
276 Ga0496107_0360776 3300048910 Bacteria 1081
277 Ga0496108_0014479 3300048911 Bacteria 6440
278 Ga0496109_0015684 3300048912 Bacteria 6609
279 Ga0496110_0014325 3300048913 Bacteria 6580
280 Ga0496111_0370175 3300048914 Bacteria 1060
281 Ga0496112_0029892 3300048915 Bacteria 5271
282 Ga0496112_0286545 3300048915 Bacteria 1593
283 Ga0496112_0371349 3300048915 Bacteria 1372
284 Ga0496112_0445003 3300048915 Bacteria 1234
285 Ga0496112_0959666 3300048915 Bacteria 776
286 Ga0496113_0231398 3300048916 Bacteria 1474
287 Ga0501031_0419276 3300049568 Bacteria 865
288 Ga0501033_0171551 3300049570 Bacteria 1558
289 Ga0501034_0466053 3300049571 Bacteria 1180
290 Ga0501036_0122448 3300049572 Bacteria 2197
291 Ga0501037_0053936 3300049573 Bacteria 2941
292 Ga0501038_0001326 3300049574 Bacteria 22513
293 Ga0501040_0103104 3300049576 Bacteria 1991
294 Ga0501041_0158012 3300049577 Bacteria 1417
295 Ga0501047_0007494 3300049581 Bacteria 10269
296 Ga0501047_0153383 3300049581 Bacteria 2178
297 Ga0501071_0011030 3300049587 Bacteria 6070
298 Ga0501074_0111486 3300049590 Bacteria 1957
299 Ga0501075_0093525 3300049591 Bacteria 2282
300 Ga0501076_0083773 3300049592 Bacteria 2561
301 Ga0501044_0025637 3300049823 Bacteria 6251
302 Ga0501044_0055657 3300049823 Bacteria 4062
303 Ga0501044_0055792 3300049823 Bacteria 4057
304 Ga0501044_0110834 3300049823 Bacteria 2753
305 Ga0501045_0001134 3300049824 Bacteria 17632
306 Ga0495619_0045863 3300053085 Bacteria 2873
307 Ga0500644_0006343 3300053088 Bacteria 3025
308 Ga0500640_059699 3300053095 Bacteria 1655
309 Ga0500594_0004293 3300053118 Bacteria 3142
310 Ga0500573_0195138 3300053140 Bacteria 1079
311 Ga0500600_0206764 3300053149 Bacteria 919
312 Ga0501084_0089000 3300054114 Bacteria 2591
313 Ga0466962_0000235 3300061719 Bacteria 23116
314 2585298982 2582581312 Bacteria 7308206
315 2585311681 2582581313 Bacteria 10042643
316 2616697691 2616644814 Bacteria 11555299
317 2689993444 2687453743 Bacteria 8361025
318 2772645132 2772190715 Bacteria 6959372
319 2785374364 2784746768 Bacteria 10036182
320 2786674530 2786546132 Bacteria 10419719
321 2795785088 2795385470 Bacteria 8317180
322 2819697608 2818991463 Bacteria 7948711
323 2855670446 2855670206 Bacteria 7120389
324 2855682634 2855676851 Bacteria 7063653
325 2857293344 2857288857 Bacteria 7189066
326 2858849189 2858848962 Bacteria 6963058
327 2858884278 2858882152 Bacteria 7230291
328 2858892356 2858888857 Bacteria 7060307
329 2862511129 2862507626 Bacteria 9425308
330 2863074832 2863067949 Bacteria 8541735
331 2867314296 2867312974 Bacteria 7058875
332 2867321600 2867319477 Bacteria 7069771
333 2869053421 2869048445 Bacteria 6875584
334 2869062129 2869061728 Bacteria 7112407
335 2869071652 2869068681 Bacteria 7205615
336 2877677446 2877676314 Bacteria 9512378
337 2880491240 2880489317 Bacteria 7096270
338 2929223248 2929219909 Bacteria 6984360
339 2929229734 2929226422 Bacteria 7248583
340 2954680874 2954673503 Bacteria 9685905
341 2954683283 2954682443 Bacteria 9862841
342 2954692985 2954691527 Bacteria 10720516
343 2954708058 2954701450 Bacteria 10834262
344 2990090703 2990088156 Bacteria 6657676
345 2997452549 2997451912 Bacteria 8492419
346 8003836599 8003830390 Bacteria 6541657
347 8054704702 8054704163 Bacteria 7247792
348 8054737518 8054734606 Bacteria 6947278
349 rootH1_10064921
350 JGI24737J22298_10030441
351 JGI24735J21928_10022156
352 JGI25406J46586_10012078
353 rootH1_10039166
354 Ga0070683_100005769
355 Ga0070683_100074159
356 Ga0070683_100186338
357 Ga0070667_100007268
358 Ga0070713_100691616
359 Ga0070708_100034904
360 Ga0070681_10030297
361 Ga0070681_10087022
362 Ga0070681_10339790
363 Ga0070681_10461063
364 Ga0070685_10185039
365 Ga0070707_100441059
366 Ga0070679_100035659
367 Ga0070679_100299434
368 Ga0070684_100003627
369 Ga0070684_100026607
370 Ga0070684_100240675
371 Ga0070684_100385214
372 Ga0070665_100090248
373 Ga0070664_100005799
374 Ga0068857_100752447
375 Ga0068854_100556091
376 Ga0068856_100738165
377 Ga0068863_100009472
378 Ga0068858_100045248
379 Ga0068860_100072311
380 Ga0081540_1024807
381 Ga0081539_10015319
382 Ga0070717_10050960
383 Ga0075363_100017582
384 Ga0105251_10013067
385 Ga0105248_10123857
386 Ga0105033_101099
387 Ga0157370_10016035
388 Ga0157369_10036400
389 Ga0157369_10483066
390 Ga0157369_10823805
391 Ga0157374_10321954
392 Ga0157372_10779185
393 Ga0163163_10017123
394 Ga0163163_10024411
395 Ga0157379_10112993
396 Ga0206351_10257618
397 Ga0206351_10439284
398 Ga0206350_10192266
399 Ga0206350_11171516
400 Ga0206354_10488438
401 Ga0206354_10952112
402 Ga0206353_11722827
403 Ga0206353_11873431
404 Ga0213873_10000040
405 Ga0213876_10047504
406 Ga0224712_10079698
407 Ga0224712_10081290
408 Ga0209758_1003133
409 Ga0207713_1050034
410 Ga0207692_10067276
411 Ga0207647_10021001
412 Ga0207684_10048654
413 Ga0207684_10140104
414 Ga0207684_10737826
415 Ga0207707_10071672
416 Ga0207707_10262022
417 Ga0207707_10392493
418 Ga0207660_10003993
419 Ga0207660_10336226
420 Ga0207652_10023970
421 Ga0207652_10444008
422 Ga0207646_10033352
423 Ga0207646_10339440
424 Ga0207700_10101956
425 Ga0207700_10261193
426 Ga0207664_10345507
427 Ga0207661_10017616
428 Ga0207661_10066967
429 Ga0207661_10265535
430 Ga0207679_10006192
431 Ga0207668_10790742
432 Ga0207703_10008110
433 Ga0207641_10300181
434 Ga0207674_10465184
435 Ga0268266_10535615
436 Ga0268264_10106618
437 Ga0307515_10004604
438 Ga0307515_10096963
439 Ga0265338_10004132
440 Ga0265338_10137307
441 Ga0307512_10003136
442 Ga0307512_10009718
443 Ga0265332_10186684
444 Ga0265328_10001480
445 Ga0265320_10001309
446 Ga0265320_10006305
447 Ga0265339_10005096
448 Ga0265339_10009692
449 Ga0307513_10003373
450 Ga0307513_10030349
451 Ga0307513_10501311
452 Ga0307509_10062922
453 Ga0307508_10028239
454 Ga0265314_10025621
455 Ga0265314_10058131
456 Ga0265342_10000508
457 Ga0265342_10004078
458 Ga0307516_10010275
459 Ga0307516_10047328
460 Ga0307516_10108239
461 Ga0307405_10101680
462 Ga0307405_10338503
463 Ga0307410_10143649
464 Ga0326468_10000156
465 Ga0307406_10182331
466 Ga0307407_10007993
467 Ga0307407_10032064
468 Ga0307409_100061355
469 Ga0307409_100085542
470 Ga0307416_100019467
471 Ga0307416_100731283
472 Ga0307416_100765360
473 Ga0307416_100820593
474 Ga0307411_10051625
475 Ga0307415_100030757
476 Ga0307415_100783452
477 Ga0307507_10020421
478 Ga0307507_10059198
479 Ga0307510_10362978
480 Ga0373951_0000010
481 Ga0373956_0002237
482 Ga0373927_0248695
483 Ga0395900_0451263
484 Ga0395898_0097934
485 Ga0395905_0335076
486 Ga0436362_0604286
487 Ga0439449_0099487
488 Ga0439455_0019513
489 Ga0450903_005988
490 Ga0439458_0001731
491 Ga0466972_0026585
492 Ga0466965_0000538
493 Ga0466966_0003273
494 Ga0466966_0008442
495 Ga0466963_0003039
496 Ga0466963_0008641
497 Ga0466963_0019035
498 Ga0466963_0041391
499 Ga0466964_0026929
500 Ga0466971_0032916
501 Ga0466968_0190740
502 Ga0466968_0200209
503 Ga0466970_0002168
504 Ga0466957_0000882
505 Ga0466957_0004497
506 Ga0466959_0001792
507 Ga0466959_0048199
508 Ga0466958_0001716
509 Ga0466958_0004082
510 Ga0466967_0034023
511 Ga0466967_0124316
512 Ga0466967_0267758
513 Ga0466967_0472348
514 Ga0495592_0059192
515 Ga0495592_0135327
516 Ga0495603_0018340
517 Ga0495603_0183522
518 Ga0495629_0000765
519 Ga0495629_0363198
520 Ga0495638_0073938
521 Ga0495638_0341010
522 Ga0495651_0001163
523 Ga0495651_0023447
524 Ga0495651_0379376
525 Ga0495653_0124596
526 Ga0495580_0165785
527 Ga0495662_0003716
528 Ga0495664_0020034
529 Ga0495594_0001639
530 Ga0495583_0050022
531 Ga0495608_0006766
532 Ga0495618_0005200
533 Ga0495618_0006641
534 Ga0495618_0102246
535 Ga0495620_0001023
536 Ga0495628_0041675
537 Ga0495628_0105277
538 Ga0495628_0253996
539 Ga0495630_0025931
540 Ga0495630_0252610
541 Ga0495631_0172607
542 Ga0495643_0002161
543 Ga0495666_0012924
544 Ga0495652_0000362
545 Ga0495652_0026567
546 Ga0495640_0009948
547 Ga0495640_0012807
548 Ga0495640_0014873
549 Ga0495586_0016795
550 Ga0495587_0004895
551 Ga0495587_0016233
552 Ga0495587_0160086
553 Ga0495597_0063450
554 Ga0495645_0104817
555 Ga0495645_0160304
556 Ga0495622_0004870
557 Ga0495667_0009764
558 Ga0495668_0095050
559 Ga0495634_0010944
560 Ga0495634_0015156
561 Ga0495634_0024469
562 Ga0495634_0273051
563 Ga0495611_0094112
564 Ga0495625_0153048
565 Ga0495635_0007971
566 Ga0495635_0042596
567 Ga0495588_0006500
568 Ga0495588_0007403
569 Ga0495588_0087913
570 Ga0495657_0000583
571 Ga0495657_0002488
572 Ga0495657_0008080
573 Ga0495657_0015175
574 Ga0495599_0019547
575 Ga0495623_0026224
576 Ga0495623_0043623
577 Ga0495646_0033338
578 Ga0495613_0001226
579 Ga0495613_0003487
580 Ga0495613_0004809
581 Ga0495613_0189817
582 Ga0495624_0080646
583 Ga0495671_0252137
584 Ga0495589_0010357
585 Ga0495589_0040881
586 Ga0495600_0000678
587 Ga0495600_0042942
588 Ga0495660_0117086
589 Ga0495581_0023977
590 Ga0495604_0004151
591 Ga0495604_0028894
592 Ga0495604_0034394
593 Ga0495604_0137796
594 Ga0495636_0001831
595 Ga0495636_0063692
596 Ga0495674_0041853
597 Ga0495672_0033953
598 Ga0495676_0004136
599 Ga0495676_0009620
600 Ga0495676_0010573
601 Ga0495676_0014849
602 Ga0495676_0092789
603 Ga0495680_0006642
604 Ga0495680_0225530
605 Ga0495683_0132595
606 Ga0495683_0202164
607 Ga0495687_014506
608 Ga0495675_0063020
609 Ga0495675_0255849
610 Ga0495685_025884
611 Ga0495685_031754
612 Ga0495684_0032255
613 Ga0495593_0003455
614 Ga0495593_0003493
615 Ga0495593_0064078
616 Ga0495593_0178441
617 Ga0495602_0037775
618 Ga0495602_0138823
619 Ga0495614_0000979
620 Ga0495614_0056505
621 Ga0495614_0091923
622 Ga0495626_0085563
623 Ga0496104_0925880
624 Ga0496107_0360776
625 Ga0496108_0014479
626 Ga0496109_0015684
627 Ga0496110_0014325
628 Ga0496111_0370175
629 Ga0496112_0029892
630 Ga0496112_0286545
631 Ga0496112_0371349
632 Ga0496112_0445003
633 Ga0496112_0959666
634 Ga0496113_0231398
635 Ga0501031_0419276
636 Ga0501033_0171551
637 Ga0501034_0466053
638 Ga0501036_0122448
639 Ga0501037_0053936
640 Ga0501038_0001326
641 Ga0501040_0103104
642 Ga0501041_0158012
643 Ga0501047_0007494
644 Ga0501047_0153383
645 Ga0501071_0011030
646 Ga0501074_0111486
647 Ga0501075_0093525
648 Ga0501076_0083773
649 Ga0501044_0025637
650 Ga0501044_0055657
651 Ga0501044_0055792
652 Ga0501044_0110834
653 Ga0501045_0001134
654 Ga0495619_0045863
655 Ga0500644_0006343
656 Ga0500640_059699
657 Ga0500594_0004293
658 Ga0500573_0195138
659 Ga0500600_0206764
660 Ga0501084_0089000
661 Ga0466962_0000235
662 2585298982
663 2585311681
664 2616697691
665 2689993444
666 2772645132
667 2785374364
668 2786674530
669 2795785088
670 2819697608
671 2855670446
672 2855682634
673 2857293344
674 2858849189
675 2858884278
676 2858892356
677 2862511129
678 2863074832
679 2867314296
680 2867321600
681 2869053421
682 2869062129
683 2869071652
684 2877677446
685 2880491240
686 2929223248
687 2929229734
688 2954680874
689 2954683283
690 2954692985
691 2954708058
692 2990090703
693 2997452549
694 8003836599
695 8054704702
696 8054737518

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

3

164

0.83

PF05368

NmrA

NmrA-like family

3

184

0.78

PF13460

NAD_binding_10

NAD(P)H-binding

7

175

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jkg-assembly1.cif.gz_A the nad+-free form of human nsdhl 0.8479 2 129
6jkg-assembly1.cif.gz_B the nad+-free form of human nsdhl 0.842 2 128
6jkh-assembly1.cif.gz_A the nad+-bound form of human nsdhl 0.8418 2 129
7qsn-assembly1.cif.gz_P bovine complex i in lipid nanodisc, deactive-apo 0.8149 1 201
6yj4-assembly1.cif.gz_P structure of yarrowia lipolytica complex i at 2.7 a 0.8139 2 211
ID Description Score Start End Superfamily
af_A0A1D6MTK5_41_178_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8252 2 94 3.40.50.720
af_Q2FVH5_1_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8199 2 211 3.40.50.720
af_Q12177_1_262_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8187 1 211 3.40.50.720
af_A0A0R4IYR2_3_342_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8136 2 210 3.40.50.720
af_I1LJN4_7_360_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8051 2 211 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A8A3HG79-F1-model_v4 deleted 0.9992 1 240
AF-A0A1C4WZZ3-F1-model_v4 NAD(P)H-binding 0.995 1 126
AF-A0A7K2MXW2-F1-model_v4 NAD(P)H-binding protein 0.9931 1 137
AF-A0A7J5CRV7-F1-model_v4 deleted 0.9924 28 242
AF-A0A8A3HG79-F1-model_v4 deleted 0.9909 1 240

Map