F417104

General Info

Members Datasets Scaffolds Average Seq Length
347 172 341 350

Family's Representative Sequence

Representative Sequence 3300006871|Ga0075434_100014551|Ga0075434_1000145516
Length 423
Sequence MITEPAGATIFTSSGCGPMPDPNASMSIGGSLTRWEPVGFQNGVQVADLRVFLRWWSRGWQCHGVVTVRMLYLMFVRLTGWMALLARSAASKDAELLVLRHEVAVLRRQNPRPGLEWADRVVLAALARLLPRPVRMSRLVTPDALLRWHRRLVRRRWTYPRRGGRPPVDDRLVVLIGQMARENPGCGYQRIQGELLGLGYRVGASTVRRVLGRLRIPPAPQRSRTTWRQFLRTQASTMLACDFFHVDCAVTLRRLYVFFVIEVDSRYVHVVGMTAYPDGAWTTQQARNLLMDLGERAARFKYLIRERAGQFTEAFDTTLVGAGIEVVKIPPRSPRANAFAERWVRTVRAEVTDRMLIAGRRHLRMVLDEYVAHYNRHRPHRALNLRPPDGDEVTPAVIIDLTTARMRRRRVLGGLINEYERAA

Samples

Sample ID Description Type Environment
1 2508501039 Frankia saprophytica CN3 Isolate Nodule
2 2684623035 Frankia sp. NRRL B-16219 Isolate Rhizosphere
3 2773857933 Frankia sp. BMG5.30 Isolate Nodule
4 2895880812 Frankia sp. BMG5.11 Isolate Unclassified
5 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
30 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
31 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
36 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
40 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
53 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
85 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
88 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
89 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
90 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
91 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
92 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
93 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
96 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
97 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
98 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
99 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
100 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
101 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
107 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
114 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
115 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
116 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
117 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
124 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
125 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
126 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
127 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
128 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
129 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
130 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
131 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
132 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
133 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
134 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
135 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
136 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
137 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
138 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
139 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
140 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
141 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
142 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
145 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
146 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
147 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
152 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
156 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
157 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
158 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
159 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
160 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
163 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
164 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
165 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
166 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
171 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
172 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.27
Metatranscriptomes 0
Isolates 1.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.58
Rhizoplane 1.73
Rhizosphere 96.25
Stem 0
Stem Tuber 0
Unclassified 1.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10033794 3300003320 Bacteria 12621
2 Ga0070658_10049551 3300005327 Bacteria 3403
3 Ga0070676_10034860 3300005328 Bacteria 2891
4 Ga0070683_100077849 3300005329 Bacteria 3101
5 Ga0070683_100342965 3300005329 Bacteria 1422
6 Ga0070690_100132893 3300005330 Bacteria 1682
7 Ga0070670_100431429 3300005331 Bacteria 1166
8 Ga0068869_100031716 3300005334 Bacteria 3718
9 Ga0070680_100247379 3300005336 Bacteria 1507
10 Ga0070682_100208063 3300005337 Bacteria 1385
11 Ga0070689_100013291 3300005340 Bacteria 5954
12 Ga0070687_100027337 3300005343 Bacteria 2755
13 Ga0070661_100040560 3300005344 Bacteria 3397
14 Ga0070659_100305436 3300005366 Bacteria 1328
15 Ga0070667_100040702 3300005367 Bacteria 3897
16 Ga0070709_10064728 3300005434 Bacteria 2338
17 Ga0070714_100066460 3300005435 Bacteria 3107
18 Ga0070714_100075772 3300005435 Bacteria 2919
19 Ga0070714_100156559 3300005435 Bacteria 2057
20 Ga0070714_100320964 3300005435 Bacteria 1448
21 Ga0070714_100329562 3300005435 Bacteria 1429
22 Ga0070713_100018710 3300005436 Bacteria 5268
23 Ga0070713_100085608 3300005436 Bacteria 2701
24 Ga0070710_10028800 3300005437 Bacteria 2974
25 Ga0070711_100187103 3300005439 Bacteria 1589
26 Ga0070700_100199128 3300005441 Bacteria 1406
27 Ga0070694_100048436 3300005444 Bacteria 2859
28 Ga0070708_100004271 3300005445 Bacteria 11231
29 Ga0070708_100180004 3300005445 Bacteria 1975
30 Ga0070708_100308891 3300005445 Bacteria 1489
31 Ga0070706_100007000 3300005467 Bacteria 10635
32 Ga0070706_100012207 3300005467 Bacteria 7962
33 Ga0070706_100015092 3300005467 Bacteria 7135
34 Ga0070707_100053042 3300005468 Bacteria 3887
35 Ga0070698_100010628 3300005471 Bacteria 9808
36 Ga0070698_100052587 3300005471 Unclassified 4143
37 Ga0070698_100261635 3300005471 Bacteria 1662
38 Ga0070665_100041153 3300005548 Bacteria 4644
39 Ga0068856_100316056 3300005614 Bacteria 1579
40 Ga0068856_100321030 3300005614 Bacteria 1566
41 Ga0070702_100014766 3300005615 Bacteria 3970
42 Ga0068859_100074945 3300005617 Bacteria 3424
43 Ga0068861_100282220 3300005719 Bacteria 1431
44 Ga0068870_10089085 3300005840 Bacteria 1722
45 Ga0068863_100087135 3300005841 Bacteria 2958
46 Ga0070717_10209224 3300006028 Bacteria 1711
47 Ga0070715_10098702 3300006163 Unclassified 1358
48 Ga0070712_100060929 3300006175 Bacteria 2664
49 Ga0070712_100212150 3300006175 Bacteria 1527
50 Ga0075434_100011222 3300006871 Bacteria 8436
51 Ga0075434_100014551 3300006871 Bacteria 7524
52 Ga0075434_100192274 3300006871 Bacteria 2061
53 Ga0075436_100195064 3300006914 Bacteria 1433
54 Ga0097620_100074945 3300006931 Bacteria 3424
55 Ga0075435_100047003 3300007076 Bacteria 3464
56 Ga0075435_100058364 3300007076 Bacteria 3125
57 Ga0105240_10092813 3300009093 Bacteria 3685
58 Ga0105245_10050987 3300009098 Bacteria 3710
59 Ga0105247_10032180 3300009101 Bacteria 3186
60 Ga0105243_10051791 3300009148 Bacteria 3248
61 Ga0105241_10008169 3300009174 Bacteria 7707
62 Ga0105242_10058243 3300009176 Bacteria 3166
63 Ga0105249_10045563 3300009553 Bacteria 3989
64 Ga0105246_10032514 3300011119 Bacteria 3460
65 Ga0157374_10043754 3300013296 Bacteria 4137
66 Ga0157374_10459461 3300013296 Bacteria 1275
67 Ga0157375_10691584 3300013308 Bacteria 1174
68 Ga0163163_10070353 3300014325 Bacteria 3485
69 Ga0157377_10013308 3300014745 Bacteria 4163
70 Ga0157376_10253600 3300014969 Bacteria 1645
71 Ga0163161_10144171 3300017792 Bacteria 1805
72 Ga0207692_10012077 3300025898 Bacteria 3698
73 Ga0207688_10000790 3300025901 Bacteria 15782
74 Ga0207688_10015474 3300025901 Bacteria 4137
75 Ga0207699_10026560 3300025906 Bacteria 3194
76 Ga0207645_10056755 3300025907 Bacteria 2500
77 Ga0207684_10021635 3300025910 Bacteria 5491
78 Ga0207684_10140251 3300025910 Bacteria 2078
79 Ga0207684_10353634 3300025910 Unclassified 1264
80 Ga0207707_10153089 3300025912 Bacteria 2016
81 Ga0207693_10087270 3300025915 Bacteria 2444
82 Ga0207693_10136199 3300025915 Bacteria 1931
83 Ga0207663_10134932 3300025916 Bacteria 1711
84 Ga0207662_10019360 3300025918 Bacteria 3872
85 Ga0207657_10038691 3300025919 Bacteria 4243
86 Ga0207700_10016238 3300025928 Bacteria 4941
87 Ga0207700_10024330 3300025928 Bacteria 4190
88 Ga0207700_10115400 3300025928 Bacteria 2168
89 Ga0207700_10126042 3300025928 Bacteria 2083
90 Ga0207664_10018613 3300025929 Bacteria 5117
91 Ga0207664_10024433 3300025929 Bacteria 4541
92 Ga0207664_10061551 3300025929 Bacteria 2995
93 Ga0207664_10075850 3300025929 Bacteria 2720
94 Ga0207664_10089320 3300025929 Bacteria 2523
95 Ga0207690_10038702 3300025932 Bacteria 3106
96 Ga0207670_10011385 3300025936 Bacteria 5161
97 Ga0207704_10272691 3300025938 Bacteria 1282
98 Ga0207665_10159401 3300025939 Bacteria 1622
99 Ga0207691_10133435 3300025940 Bacteria 2192
100 Ga0207689_10026424 3300025942 Bacteria 4860
101 Ga0207689_10037031 3300025942 Bacteria 4049
102 Ga0207651_10329732 3300025960 Bacteria 1279
103 Ga0207712_10032174 3300025961 Bacteria 3539
104 Ga0207677_10175519 3300026023 Bacteria 1680
105 Ga0207702_10275025 3300026078 Bacteria 1590
106 Ga0207702_10342846 3300026078 Bacteria 1428
107 Ga0207702_10392790 3300026078 Bacteria 1336
108 Ga0207676_10183981 3300026095 Bacteria 1832
109 Ga0207675_100022981 3300026118 Bacteria 5799
110 Ga0207675_100039674 3300026118 Bacteria 4394
111 Ga0207683_10043851 3300026121 Bacteria 3909
112 Ga0265336_10023775 3300028666 Bacteria 1940
113 Ga0265338_10001308 3300028800 Bacteria 40815
114 Ga0265338_10062824 3300028800 Bacteria 3243
115 Ga0307508_10217023 3300031616 Bacteria 1513
116 Ga0373959_0014698 3300034820 Bacteria 1428
117 Ga0373938_0020339 3300034957 Bacteria 1336
118 Ga0373926_0080027 3300035083 Bacteria 1208
119 Ga0373928_0012502 3300035084 Bacteria 1694
120 Ga0373928_0021066 3300035084 Bacteria 1372
121 Ga0373929_0011857 3300035085 Bacteria 1649
122 Ga0373934_0000796 3300035086 Bacteria 11351
123 Ga0373934_0015358 3300035086 Bacteria 2904
124 Ga0373934_0097268 3300035086 Bacteria 1189
125 Ga0373923_0008993 3300035111 Bacteria 3587
126 Ga0373923_0011392 3300035111 Bacteria 3260
127 Ga0373923_0043138 3300035111 Bacteria 1866
128 Ga0373936_0016000 3300035113 Bacteria 2879
129 Ga0373936_0103277 3300035113 Bacteria 1204
130 Ga0373945_0029113 3300035116 Bacteria 1939
131 Ga0373953_0001847 3300035117 Bacteria 6264
132 Ga0373953_0009903 3300035117 Bacteria 3301
133 Ga0373953_0033784 3300035117 Bacteria 2002
134 Ga0373954_0012623 3300035118 Bacteria 3758
135 Ga0373954_0107371 3300035118 Bacteria 1349
136 Ga0373956_0001912 3300035119 Bacteria 8601
137 Ga0373956_0022362 3300035119 Bacteria 2705
138 Ga0373957_0001355 3300035120 Bacteria 6581
139 Ga0373957_0002717 3300035120 Bacteria 5083
140 Ga0373943_0033221 3300035170 Bacteria 2456
141 Ga0373946_0070072 3300035171 Bacteria 1512
142 Ga0373955_0010178 3300035172 Bacteria 4432
143 Ga0373955_0042152 3300035172 Unclassified 2450
144 Ga0373955_0047002 3300035172 Bacteria 2336
145 Ga0373924_0000845 3300035410 Bacteria 9608
146 Ga0373924_0002309 3300035410 Bacteria 6399
147 Ga0373924_0086905 3300035410 Bacteria 1334
148 Ga0373927_0136919 3300035695 Bacteria 1601
149 Ga0373927_0200139 3300035695 Bacteria 1311
150 Ga0373933_0000854 3300035724 Bacteria 18658
151 Ga0373933_0002588 3300035724 Bacteria 10135
152 Ga0373933_0018802 3300035724 Bacteria 3891
153 Ga0373933_0186944 3300035724 Bacteria 1323
154 Ga0373933_0199771 3300035724 Bacteria 1279
155 Ga0373947_0187871 3300035725 Bacteria 1347
156 Ga0373937_0003423 3300036401 Bacteria 13319
157 Ga0373937_0004784 3300036401 Bacteria 11498
158 Ga0373937_0027527 3300036401 Bacteria 5140
159 Ga0373937_0048977 3300036401 Bacteria 3869
160 Ga0373937_0202828 3300036401 Bacteria 1864
161 Ga0373937_0303648 3300036401 Bacteria 1509
162 Ga0373937_0373777 3300036401 Bacteria 1351
163 Ga0373925_0128127 3300037068 Bacteria 1976
164 Ga0373925_0199104 3300037068 Bacteria 1592
165 Ga0373925_0392908 3300037068 Bacteria 1130
166 Ga0395899_0038290 3300037312 Bacteria 3592
167 Ga0395899_0084282 3300037312 Bacteria 2310
168 Ga0395899_0087252 3300037312 Unclassified 2265
169 Ga0395899_0201280 3300037312 Unclassified 1388
170 Ga0395900_0148877 3300037418 Bacteria 2392
171 Ga0395900_0159392 3300037418 Unclassified 2302
172 Ga0395900_0246800 3300037418 Bacteria 1788
173 Ga0395898_0006364 3300037466 Bacteria 12613
174 Ga0395898_0054765 3300037466 Bacteria 3891
175 Ga0395898_0097508 3300037466 Unclassified 2823
176 Ga0395898_0100657 3300037466 Bacteria 2775
177 Ga0395898_0157151 3300037466 Bacteria 2175
178 Ga0395905_0031432 3300037471 Bacteria 4998
179 Ga0395905_0064395 3300037471 Bacteria 3430
180 Ga0395905_0075720 3300037471 Bacteria 3154
181 Ga0395905_0151395 3300037471 Unclassified 2182
182 Ga0395901_0126341 3300038443 Bacteria 2687
183 Ga0395901_0140669 3300038443 Plasmid 2536
184 Ga0395901_0142681 3300038443 Bacteria 2517
185 Ga0395901_0145356 3300038443 Bacteria 2492
186 Ga0395901_0150976 3300038443 Unclassified 2441
187 Ga0395901_0170934 3300038443 Bacteria 2280
188 Ga0436362_0414794 3300039453 Unclassified 1318
189 Ga0466969_0105576 3300044656 Bacteria 1322
190 Ga0466966_0190360 3300044684 Bacteria 1243
191 Ga0466971_0005087 3300044719 Bacteria 5696
192 Ga0495592_0011306 3300046454 Bacteria 6750
193 Ga0495592_0027082 3300046454 Bacteria 4345
194 Ga0495592_0051686 3300046454 Bacteria 3052
195 Ga0495592_0064174 3300046454 Bacteria 2692
196 Ga0495592_0068465 3300046454 Bacteria 2591
197 Ga0495603_0230541 3300046455 Bacteria 1068
198 Ga0495629_0013087 3300046459 Bacteria 5994
199 Ga0495629_0101475 3300046459 Bacteria 2008
200 Ga0495651_0003819 3300046462 Bacteria 11520
201 Ga0495651_0011684 3300046462 Bacteria 6750
202 Ga0495651_0013969 3300046462 Bacteria 6210
203 Ga0495651_0051874 3300046462 Bacteria 3161
204 Ga0495651_0196276 3300046462 Bacteria 1416
205 Ga0495653_0004319 3300046463 Bacteria 11495
206 Ga0495653_0014437 3300046463 Bacteria 6444
207 Ga0495653_0091147 3300046463 Bacteria 2228
208 Ga0495653_0232988 3300046463 Bacteria 1231
209 Ga0495580_0092594 3300046472 Bacteria 2104
210 Ga0495580_0188296 3300046472 Bacteria 1424
211 Ga0495582_0070488 3300046473 Bacteria 1934
212 Ga0495639_0082984 3300046475 Bacteria 1494
213 Ga0495639_0084518 3300046475 Bacteria 1482
214 Ga0495662_0023416 3300046476 Bacteria 2982
215 Ga0495662_0181384 3300046476 Bacteria 1037
216 Ga0495664_0025808 3300046477 Bacteria 3421
217 Ga0495664_0096211 3300046477 Bacteria 1782
218 Ga0495664_0108884 3300046477 Bacteria 1671
219 Ga0495608_0000075 3300046511 Bacteria 76519
220 Ga0495608_0158423 3300046511 Bacteria 1440
221 Ga0495618_0052143 3300046514 Bacteria 2585
222 Ga0495618_0209537 3300046514 Bacteria 1232
223 Ga0495628_0009540 3300046516 Bacteria 8287
224 Ga0495628_0011496 3300046516 Bacteria 7483
225 Ga0495628_0011793 3300046516 Bacteria 7377
226 Ga0495628_0012920 3300046516 Bacteria 7031
227 Ga0495628_0018587 3300046516 Bacteria 5755
228 Ga0495628_0028617 3300046516 Bacteria 4525
229 Ga0495628_0029610 3300046516 Bacteria 4437
230 Ga0495630_0037348 3300046517 Bacteria 3631
231 Ga0495630_0123979 3300046517 Bacteria 1960
232 Ga0495630_0199770 3300046517 Bacteria 1526
233 Ga0495666_0101499 3300046526 Bacteria 1355
234 Ga0495652_0007987 3300046529 Bacteria 9708
235 Ga0495652_0010058 3300046529 Bacteria 8576
236 Ga0495652_0014379 3300046529 Bacteria 7105
237 Ga0495652_0020751 3300046529 Bacteria 5839
238 Ga0495652_0115159 3300046529 Bacteria 2155
239 Ga0495652_0185490 3300046529 Bacteria 1592
240 Ga0495652_0193491 3300046529 Bacteria 1550
241 Ga0495665_0080329 3300046531 Bacteria 1715
242 Ga0495640_0038176 3300046533 Bacteria 3379
243 Ga0495640_0077888 3300046533 Bacteria 2209
244 Ga0495640_0159962 3300046533 Bacteria 1444
245 Ga0495640_0210979 3300046533 Bacteria 1227
246 Ga0495586_0008616 3300046535 Bacteria 5432
247 Ga0495587_0000435 3300046536 Bacteria 29335
248 Ga0495587_0008017 3300046536 Bacteria 6818
249 Ga0495587_0013408 3300046536 Bacteria 5152
250 Ga0495645_0040194 3300046543 Bacteria 3412
251 Ga0495645_0066840 3300046543 Bacteria 2597
252 Ga0495645_0124982 3300046543 Bacteria 1808
253 Ga0495667_0002205 3300046559 Bacteria 13028
254 Ga0495667_0002845 3300046559 Bacteria 11574
255 Ga0495667_0007420 3300046559 Bacteria 7434
256 Ga0495667_0031161 3300046559 Bacteria 3580
257 Ga0495667_0122586 3300046559 Bacteria 1678
258 Ga0495634_0064196 3300046642 Bacteria 2435
259 Ga0495634_0078126 3300046642 Bacteria 2169
260 Ga0495634_0114090 3300046642 Bacteria 1735
261 Ga0495635_0002074 3300046663 Bacteria 13595
262 Ga0495635_0041507 3300046663 Bacteria 3177
263 Ga0495635_0051173 3300046663 Bacteria 2847
264 Ga0495635_0099896 3300046663 Bacteria 1983
265 Ga0495635_0159863 3300046663 Bacteria 1533
266 Ga0495657_0004994 3300046675 Bacteria 10542
267 Ga0495657_0007092 3300046675 Bacteria 8691
268 Ga0495657_0007775 3300046675 Bacteria 8235
269 Ga0495657_0037320 3300046675 Bacteria 3350
270 Ga0495599_0007134 3300046678 Bacteria 6766
271 Ga0495599_0020323 3300046678 Bacteria 4135
272 Ga0495599_0020928 3300046678 Bacteria 4077
273 Ga0495599_0122381 3300046678 Bacteria 1617
274 Ga0495599_0135099 3300046678 Bacteria 1531
275 Ga0495599_0153327 3300046678 Bacteria 1426
276 Ga0495623_0000198 3300046679 Bacteria 38159
277 Ga0495623_0085235 3300046679 Bacteria 1948
278 Ga0495623_0190405 3300046679 Bacteria 1185
279 Ga0495646_0007485 3300046680 Bacteria 6939
280 Ga0495646_0011224 3300046680 Bacteria 5688
281 Ga0495646_0046159 3300046680 Bacteria 2657
282 Ga0495647_0085794 3300046681 Bacteria 1283
283 Ga0495658_0052314 3300046683 Bacteria 2316
284 Ga0495613_0063629 3300046689 Bacteria 2699
285 Ga0495613_0117076 3300046689 Bacteria 1916
286 Ga0495624_0102038 3300046690 Bacteria 1766
287 Ga0495600_0001707 3300046809 Bacteria 12268
288 Ga0495600_0002656 3300046809 Bacteria 10329
289 Ga0495600_0021353 3300046809 Bacteria 4145
290 Ga0495581_0137413 3300047315 Bacteria 1425
291 Ga0495604_0006427 3300047317 Bacteria 9328
292 Ga0495604_0009196 3300047317 Bacteria 7821
293 Ga0495604_0019977 3300047317 Bacteria 5354
294 Ga0495604_0023235 3300047317 Bacteria 4946
295 Ga0495604_0025462 3300047317 Bacteria 4715
296 Ga0495674_0030224 3300047319 Bacteria 4927
297 Ga0495674_0043190 3300047319 Bacteria 4014
298 Ga0495674_0061074 3300047319 Bacteria 3286
299 Ga0495674_0066089 3300047319 Bacteria 3139
300 Ga0495674_0207140 3300047319 Bacteria 1625
301 Ga0495674_0235135 3300047319 Bacteria 1511
302 Ga0495674_0281057 3300047319 Bacteria 1363
303 Ga0495676_0133314 3300047321 Bacteria 1790
304 Ga0495680_0011885 3300047322 Bacteria 7681
305 Ga0495680_0012620 3300047322 Bacteria 7423
306 Ga0495680_0024890 3300047322 Bacteria 4957
307 Ga0495680_0052983 3300047322 Bacteria 3160
308 Ga0495680_0199536 3300047322 Bacteria 1436
309 Ga0495680_0276127 3300047322 Bacteria 1185
310 Ga0495675_0000694 3300047444 Bacteria 21109
311 Ga0495675_0046444 3300047444 Bacteria 2764
312 Ga0495675_0050789 3300047444 Bacteria 2636
313 Ga0495675_0091600 3300047444 Bacteria 1908
314 Ga0495684_0006349 3300047471 Bacteria 9190
315 Ga0495684_0030182 3300047471 Bacteria 4162
316 Ga0495684_0042010 3300047471 Bacteria 3503
317 Ga0495684_0132620 3300047471 Bacteria 1870
318 Ga0495602_0007296 3300048088 Bacteria 11573
319 Ga0495602_0012299 3300048088 Bacteria 8807
320 Ga0495602_0018820 3300048088 Bacteria 6877
321 Ga0495614_0062363 3300048089 Bacteria 1602
322 Ga0496103_0021360 3300048906 Bacteria 3893
323 Ga0496107_0029276 3300048910 Bacteria 3917
324 Ga0496108_0002662 3300048911 Bacteria 14311
325 Ga0496113_0024147 3300048916 Bacteria 4317
326 Ga0496114_0136065 3300048917 Bacteria 2125
327 Ga0496115_0022200 3300048918 Bacteria 4914
328 Ga0496126_0016912 3300048929 Bacteria 7278
329 nmdc:mga0n895_118300_c1 3300050512 Bacteria 2670
330 nmdc:mga0n895_2907_c1 3300050512 Bacteria 13594
331 nmdc:mga0n895_469316_c1 3300050512 Bacteria 1270
332 nmdc:mga0rr50_10242_c1 3300050513 Bacteria 5939
333 nmdc:mga0rr50_5901_c1 3300050513 Bacteria 7370
334 Ga0495601_0000492 3300053077 Bacteria 20734
335 Ga0495601_0005669 3300053077 Bacteria 7283
336 Ga0495601_0059843 3300053077 Bacteria 2416
337 Ga0495601_0208929 3300053077 Bacteria 1275
338 Ga0495612_0035204 3300053078 Bacteria 2029
339 Ga0495595_0006597 3300053084 Bacteria 4738
340 Ga0495595_0051906 3300053084 Bacteria 1901
341 Ga0466962_0018110 3300061719 Bacteria 3387

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300035083 Ga0373926_0080027 Ga0373926_0080027_87_944 283
2 3300046514 Ga0495618_0209537 Ga0495618_0209537_61_918 283
3 3300047319 Ga0495674_0235135 Ga0495674_0235135_61_918 283
4 3300046516 Ga0495628_0009540 Ga0495628_0009540_6727_7596 289
5 3300053077 Ga0495601_0000492 Ga0495601_0000492_1662_2531 289
6 3300053078 Ga0495612_0035204 Ga0495612_0035204_1053_1922 289
7 3300038443 Ga0395901_0142681 Ga0395901_0142681_468_1379 297
8 3300046459 Ga0495629_0101475 Ga0495629_0101475_799_1698 297
9 3300046517 Ga0495630_0123979 Ga0495630_0123979_225_1124 297
10 iso_pu_bacteria 2895880812 2895888837 300
11 iso_pu_bacteria 2997600082 2997607027 300
12 3300005441 Ga0070700_100199128 Ga0070700_1001991281 304
13 3300013308 Ga0157375_10691584 Ga0157375_106915841 304
14 3300025901 Ga0207688_10000790 Ga0207688_100007905 304
15 3300025960 Ga0207651_10329732 Ga0207651_103297322 304
16 3300034820 Ga0373959_0014698 Ga0373959_0014698_52_972 304
17 3300035084 Ga0373928_0021066 Ga0373928_0021066_242_1162 304
18 3300047319 Ga0495674_0061074 Ga0495674_0061074_1236_2156 304
19 3300047319 Ga0495674_0281057 Ga0495674_0281057_50_970 304
20 3300047322 Ga0495680_0276127 Ga0495680_0276127_214_1134 304
21 3300046529 Ga0495652_0193491 Ga0495652_0193491_151_1077 308
22 3300026121 Ga0207683_10043851 Ga0207683_100438512 309
23 3300035086 Ga0373934_0097268 Ga0373934_0097268_11_973 313
24 iso_pu_bacteria 2684623035 2686534674 319
25 3300025928 Ga0207700_10016238 Ga0207700_100162381 321
26 3300046455 Ga0495603_0230541 Ga0495603_0230541_87_1058 321
27 3300046476 Ga0495662_0181384 Ga0495662_0181384_47_1018 321
28 3300005614 Ga0068856_100316056 Ga0068856_1003160562 326
29 3300026078 Ga0207702_10275025 Ga0207702_102750251 326
30 3300036401 Ga0373937_0027527 Ga0373937_0027527_1000_2022 328
31 3300005340 Ga0070689_100013291 Ga0070689_1000132911 333
32 3300035724 Ga0373933_0186944 Ga0373933_0186944_66_1073 333
33 3300046543 Ga0495645_0066840 Ga0495645_0066840_931_1941 334
34 3300036401 Ga0373937_0303648 Ga0373937_0303648_352_1389 336
35 3300006871 Ga0075434_100192274 Ga0075434_1001922741 338
36 3300006914 Ga0075436_100195064 Ga0075436_1001950641 338
37 3300007076 Ga0075435_100058364 Ga0075435_1000583642 338
38 3300035086 Ga0373934_0000796 Ga0373934_0000796_1834_2862 338
39 3300035111 Ga0373923_0011392 Ga0373923_0011392_527_1555 338
40 3300035117 Ga0373953_0001847 Ga0373953_0001847_1238_2266 338
41 3300035118 Ga0373954_0012623 Ga0373954_0012623_1658_2686 338
42 3300035118 Ga0373954_0107371 Ga0373954_0107371_238_1266 338
43 3300035119 Ga0373956_0001912 Ga0373956_0001912_1134_2162 338
44 3300035120 Ga0373957_0001355 Ga0373957_0001355_2978_4006 338
45 3300035172 Ga0373955_0010178 Ga0373955_0010178_837_1865 338
46 3300035410 Ga0373924_0002309 Ga0373924_0002309_4888_5916 338
47 3300035724 Ga0373933_0002588 Ga0373933_0002588_7869_8897 338
48 3300036401 Ga0373937_0004784 Ga0373937_0004784_7882_8910 338
49 3300036401 Ga0373937_0048977 Ga0373937_0048977_2532_3560 338
50 3300046454 Ga0495592_0011306 Ga0495592_0011306_5167_6195 338
51 3300046462 Ga0495651_0011684 Ga0495651_0011684_5167_6195 338
52 3300046463 Ga0495653_0014437 Ga0495653_0014437_4889_5917 338
53 3300046511 Ga0495608_0000075 Ga0495608_0000075_1225_2253 338
54 3300046516 Ga0495628_0011793 Ga0495628_0011793_1237_2265 338
55 3300046529 Ga0495652_0014379 Ga0495652_0014379_4861_5889 338
56 3300046536 Ga0495587_0000435 Ga0495587_0000435_23141_24169 338
57 3300046559 Ga0495667_0002845 Ga0495667_0002845_2674_3702 338
58 3300046675 Ga0495657_0007092 Ga0495657_0007092_2709_3737 338
59 3300046678 Ga0495599_0007134 Ga0495599_0007134_4862_5890 338
60 3300046679 Ga0495623_0000198 Ga0495623_0000198_8628_9656 338
61 3300046680 Ga0495646_0007485 Ga0495646_0007485_2663_3691 338
62 3300046809 Ga0495600_0002656 Ga0495600_0002656_4277_5305 338
63 3300047317 Ga0495604_0009196 Ga0495604_0009196_1839_2867 338
64 3300047322 Ga0495680_0011885 Ga0495680_0011885_1690_2718 338
65 3300047444 Ga0495675_0000694 Ga0495675_0000694_18862_19890 338
66 3300048088 Ga0495602_0018820 Ga0495602_0018820_5294_6322 338
67 3300050512 nmdc:mga0n895_469316_c1 nmdc:mga0n895_469316_c1_22_1050 338
68 3300050513 nmdc:mga0rr50_10242_c1 nmdc:mga0rr50_10242_c1_169_1197 338
69 3300053084 Ga0495595_0006597 Ga0495595_0006597_881_1909 338
70 3300039453 Ga0436362_0414794 Ga0436362_0414794_157_1218 339
71 3300006163 Ga0070715_10098702 Ga0070715_100987021 340
72 3300025929 Ga0207664_10024433 Ga0207664_100244335 340
73 3300028800 Ga0265338_10062824 Ga0265338_100628243 340
74 3300035111 Ga0373923_0043138 Ga0373923_0043138_550_1608 340
75 3300035172 Ga0373955_0042152 Ga0373955_0042152_287_1345 340
76 3300046454 Ga0495592_0064174 Ga0495592_0064174_644_1702 340
77 3300046472 Ga0495580_0188296 Ga0495580_0188296_81_1139 340
78 3300046477 Ga0495664_0025808 Ga0495664_0025808_2038_3096 340
79 3300046516 Ga0495628_0029610 Ga0495628_0029610_3213_4271 340
80 3300046533 Ga0495640_0038176 Ga0495640_0038176_254_1312 340
81 3300046680 Ga0495646_0046159 Ga0495646_0046159_1335_2393 340
82 3300046689 Ga0495613_0117076 Ga0495613_0117076_131_1189 340
83 3300047317 Ga0495604_0025462 Ga0495604_0025462_2481_3539 340
84 3300047444 Ga0495675_0091600 Ga0495675_0091600_472_1530 340
85 3300048089 Ga0495614_0062363 Ga0495614_0062363_197_1255 340
86 3300025910 Ga0207684_10353634 Ga0207684_103536342 341
87 3300005436 Ga0070713_100085608 Ga0070713_1000856084 342
88 3300005471 Ga0070698_100261635 Ga0070698_1002616351 342
89 3300025936 Ga0207670_10011385 Ga0207670_100113855 342
90 3300046516 Ga0495628_0028617 Ga0495628_0028617_2245_3273 342
91 3300046535 Ga0495586_0008616 Ga0495586_0008616_1368_2441 345
92 3300046642 Ga0495634_0064196 Ga0495634_0064196_185_1258 345
93 3300046683 Ga0495658_0052314 Ga0495658_0052314_211_1284 345
94 3300046689 Ga0495613_0063629 Ga0495613_0063629_1139_2212 345
95 3300050512 nmdc:mga0n895_2907_c1 nmdc:mga0n895_2907_c1_10865_12100 345
96 iso_pu_bacteria 2773857933 2774903870 345
97 3300005445 Ga0070708_100180004 Ga0070708_1001800042 346
98 3300005467 Ga0070706_100012207 Ga0070706_1000122075 346
99 3300025910 Ga0207684_10140251 Ga0207684_101402511 346
100 3300005467 Ga0070706_100007000 Ga0070706_1000070006 347
101 3300005468 Ga0070707_100053042 Ga0070707_1000530425 347
102 3300005471 Ga0070698_100010628 Ga0070698_1000106284 347
103 3300037466 Ga0395898_0157151 Ga0395898_0157151_173_1246 347
104 3300037312 Ga0395899_0038290 Ga0395899_0038290_2338_3417 349
105 3300037466 Ga0395898_0054765 Ga0395898_0054765_183_1262 349
106 3300037466 Ga0395898_0100657 Ga0395898_0100657_1537_2619 349
107 3300037471 Ga0395905_0151395 Ga0395905_0151395_172_1356 349
108 3300038443 Ga0395901_0140669 Ga0395901_0140669_185_1264 349
109 3300053077 Ga0495601_0005669 Ga0495601_0005669_5317_6372 349
110 iso_pu_bacteria 2508501039 2508675193 349
111 iso_pu_bacteria 2684623035 2686534574 349
112 3300005435 Ga0070714_100066460 Ga0070714_1000664602 350
113 3300005436 Ga0070713_100018710 Ga0070713_1000187102 350
114 3300005437 Ga0070710_10028800 Ga0070710_100288002 350
115 3300005467 Ga0070706_100015092 Ga0070706_1000150924 350
116 3300005614 Ga0068856_100321030 Ga0068856_1003210302 350
117 3300006175 Ga0070712_100212150 Ga0070712_1002121502 350
118 3300025898 Ga0207692_10012077 Ga0207692_100120772 350
119 3300025906 Ga0207699_10026560 Ga0207699_100265602 350
120 3300025910 Ga0207684_10021635 Ga0207684_100216355 350
121 3300025928 Ga0207700_10024330 Ga0207700_100243303 350
122 3300025929 Ga0207664_10061551 Ga0207664_100615512 350
123 3300025929 Ga0207664_10075850 Ga0207664_100758502 350
124 3300026078 Ga0207702_10342846 Ga0207702_103428461 350
125 3300035086 Ga0373934_0015358 Ga0373934_0015358_350_1414 350
126 3300035111 Ga0373923_0008993 Ga0373923_0008993_434_1498 350
127 3300035113 Ga0373936_0016000 Ga0373936_0016000_1730_2794 350
128 3300035116 Ga0373945_0029113 Ga0373945_0029113_522_1586 350
129 3300035117 Ga0373953_0009903 Ga0373953_0009903_321_1385 350
130 3300035117 Ga0373953_0033784 Ga0373953_0033784_851_1915 350
131 3300035119 Ga0373956_0022362 Ga0373956_0022362_420_1484 350
132 3300035120 Ga0373957_0002717 Ga0373957_0002717_1714_2778 350
133 3300035170 Ga0373943_0033221 Ga0373943_0033221_1180_2244 350
134 3300035410 Ga0373924_0000845 Ga0373924_0000845_6503_7567 350
135 3300035695 Ga0373927_0136919 Ga0373927_0136919_462_1526 350
136 3300035724 Ga0373933_0000854 Ga0373933_0000854_16033_17097 350
137 3300035725 Ga0373947_0187871 Ga0373947_0187871_186_1250 350
138 3300037068 Ga0373925_0128127 Ga0373925_0128127_168_1232 350
139 3300046454 Ga0495592_0027082 Ga0495592_0027082_353_1417 350
140 3300046459 Ga0495629_0013087 Ga0495629_0013087_4632_5696 350
141 3300046463 Ga0495653_0091147 Ga0495653_0091147_1041_2105 350
142 3300046472 Ga0495580_0092594 Ga0495580_0092594_714_1778 350
143 3300046473 Ga0495582_0070488 Ga0495582_0070488_693_1757 350
144 3300046475 Ga0495639_0082984 Ga0495639_0082984_268_1332 350
145 3300046476 Ga0495662_0023416 Ga0495662_0023416_1605_2669 350
146 3300046477 Ga0495664_0108884 Ga0495664_0108884_500_1564 350
147 3300046514 Ga0495618_0052143 Ga0495618_0052143_974_2038 350
148 3300046517 Ga0495630_0037348 Ga0495630_0037348_1227_2291 350
149 3300046517 Ga0495630_0199770 Ga0495630_0199770_199_1317 350
150 3300046529 Ga0495652_0007987 Ga0495652_0007987_249_1313 350
151 3300046531 Ga0495665_0080329 Ga0495665_0080329_391_1455 350
152 3300046533 Ga0495640_0210979 Ga0495640_0210979_98_1162 350
153 3300046536 Ga0495587_0013408 Ga0495587_0013408_98_1162 350
154 3300046559 Ga0495667_0031161 Ga0495667_0031161_2451_3515 350
155 3300046663 Ga0495635_0002074 Ga0495635_0002074_3167_4231 350
156 3300046675 Ga0495657_0007775 Ga0495657_0007775_344_1408 350
157 3300046678 Ga0495599_0020928 Ga0495599_0020928_2684_3748 350
158 3300046679 Ga0495623_0085235 Ga0495623_0085235_510_1574 350
159 3300046680 Ga0495646_0011224 Ga0495646_0011224_3314_4378 350
160 3300046681 Ga0495647_0085794 Ga0495647_0085794_182_1246 350
161 3300046690 Ga0495624_0102038 Ga0495624_0102038_585_1649 350
162 3300046809 Ga0495600_0021353 Ga0495600_0021353_2963_4027 350
163 3300047317 Ga0495604_0006427 Ga0495604_0006427_101_1165 350
164 3300047444 Ga0495675_0046444 Ga0495675_0046444_1158_2222 350
165 3300048088 Ga0495602_0012299 Ga0495602_0012299_353_1417 350
166 3300048929 Ga0496126_0016912 Ga0496126_0016912_1906_2970 350
167 3300050512 nmdc:mga0n895_118300_c1 nmdc:mga0n895_118300_c1_867_1931 350
168 3300050513 nmdc:mga0rr50_5901_c1 nmdc:mga0rr50_5901_c1_3879_4943 350
169 3300053084 Ga0495595_0051906 Ga0495595_0051906_609_1673 350
170 3300006028 Ga0070717_10209224 Ga0070717_102092241 351
171 3300006871 Ga0075434_100011222 Ga0075434_1000112225 351
172 3300025928 Ga0207700_10115400 Ga0207700_101154002 351
173 3300025929 Ga0207664_10018613 Ga0207664_100186132 351
174 3300035724 Ga0373933_0018802 Ga0373933_0018802_2671_3732 351
175 3300036401 Ga0373937_0003423 Ga0373937_0003423_9754_10815 351
176 3300037312 Ga0395899_0201280 Ga0395899_0201280_131_1204 351
177 3300037418 Ga0395900_0246800 Ga0395900_0246800_593_1666 351
178 3300046454 Ga0495592_0051686 Ga0495592_0051686_1645_2706 351
179 3300046462 Ga0495651_0003819 Ga0495651_0003819_4351_5412 351
180 3300046462 Ga0495651_0196276 Ga0495651_0196276_98_1159 351
181 3300046463 Ga0495653_0004319 Ga0495653_0004319_6100_7161 351
182 3300046516 Ga0495628_0018587 Ga0495628_0018587_3679_4740 351
183 3300046529 Ga0495652_0010058 Ga0495652_0010058_2029_3090 351
184 3300046533 Ga0495640_0077888 Ga0495640_0077888_446_1507 351
185 3300046536 Ga0495587_0008017 Ga0495587_0008017_118_1179 351
186 3300046543 Ga0495645_0040194 Ga0495645_0040194_922_1983 351
187 3300046559 Ga0495667_0002205 Ga0495667_0002205_4369_5430 351
188 3300046559 Ga0495667_0122586 Ga0495667_0122586_142_1203 351
189 3300046642 Ga0495634_0114090 Ga0495634_0114090_390_1451 351
190 3300046663 Ga0495635_0041507 Ga0495635_0041507_87_1148 351
191 3300046675 Ga0495657_0004994 Ga0495657_0004994_5217_6278 351
192 3300046675 Ga0495657_0037320 Ga0495657_0037320_179_1240 351
193 3300046678 Ga0495599_0020323 Ga0495599_0020323_1147_2208 351
194 3300046809 Ga0495600_0001707 Ga0495600_0001707_5127_6188 351
195 3300047317 Ga0495604_0023235 Ga0495604_0023235_2473_3534 351
196 3300047319 Ga0495674_0030224 Ga0495674_0030224_2534_3595 351
197 3300047322 Ga0495680_0012620 Ga0495680_0012620_4352_5413 351
198 3300047322 Ga0495680_0024890 Ga0495680_0024890_2150_3211 351
199 3300047471 Ga0495684_0006349 Ga0495684_0006349_975_2036 351
200 3300048088 Ga0495602_0007296 Ga0495602_0007296_5934_6995 351
201 3300053077 Ga0495601_0059843 Ga0495601_0059843_562_1623 351
202 3300005548 Ga0070665_100041153 Ga0070665_1000411535 352
203 3300013296 Ga0157374_10459461 Ga0157374_104594612 352
204 3300005327 Ga0070658_10049551 Ga0070658_100495516 353
205 3300005328 Ga0070676_10034860 Ga0070676_100348604 353
206 3300005329 Ga0070683_100077849 Ga0070683_1000778491 353
207 3300005329 Ga0070683_100342965 Ga0070683_1003429651 353
208 3300005330 Ga0070690_100132893 Ga0070690_1001328931 353
209 3300005331 Ga0070670_100431429 Ga0070670_1004314291 353
210 3300005334 Ga0068869_100031716 Ga0068869_1000317161 353
211 3300005336 Ga0070680_100247379 Ga0070680_1002473791 353
212 3300005337 Ga0070682_100208063 Ga0070682_1002080631 353
213 3300005343 Ga0070687_100027337 Ga0070687_1000273374 353
214 3300005344 Ga0070661_100040560 Ga0070661_1000405601 353
215 3300005366 Ga0070659_100305436 Ga0070659_1003054361 353
216 3300005367 Ga0070667_100040702 Ga0070667_1000407026 353
217 3300005434 Ga0070709_10064728 Ga0070709_100647282 353
218 3300005435 Ga0070714_100156559 Ga0070714_1001565592 353
219 3300005435 Ga0070714_100320964 Ga0070714_1003209642 353
220 3300005435 Ga0070714_100329562 Ga0070714_1003295621 353
221 3300005444 Ga0070694_100048436 Ga0070694_1000484361 353
222 3300005445 Ga0070708_100004271 Ga0070708_10000427110 353
223 3300005445 Ga0070708_100308891 Ga0070708_1003088911 353
224 3300005471 Ga0070698_100052587 Ga0070698_1000525871 353
225 3300005615 Ga0070702_100014766 Ga0070702_1000147662 353
226 3300005617 Ga0068859_100074945 Ga0068859_1000749456 353
227 3300005719 Ga0068861_100282220 Ga0068861_1002822201 353
228 3300005840 Ga0068870_10089085 Ga0068870_100890851 353
229 3300005841 Ga0068863_100087135 Ga0068863_1000871351 353
230 3300006175 Ga0070712_100060929 Ga0070712_1000609292 353
231 3300006931 Ga0097620_100074945 Ga0097620_1000749456 353
232 3300009093 Ga0105240_10092813 Ga0105240_100928131 353
233 3300009098 Ga0105245_10050987 Ga0105245_100509871 353
234 3300009101 Ga0105247_10032180 Ga0105247_100321805 353
235 3300009148 Ga0105243_10051791 Ga0105243_100517914 353
236 3300009174 Ga0105241_10008169 Ga0105241_1000816912 353
237 3300009176 Ga0105242_10058243 Ga0105242_100582435 353
238 3300009553 Ga0105249_10045563 Ga0105249_100455632 353
239 3300011119 Ga0105246_10032514 Ga0105246_100325142 353
240 3300013296 Ga0157374_10043754 Ga0157374_100437545 353
241 3300014325 Ga0163163_10070353 Ga0163163_100703536 353
242 3300014745 Ga0157377_10013308 Ga0157377_100133082 353
243 3300014969 Ga0157376_10253600 Ga0157376_102536002 353
244 3300017792 Ga0163161_10144171 Ga0163161_101441713 353
245 3300025901 Ga0207688_10015474 Ga0207688_100154742 353
246 3300025907 Ga0207645_10056755 Ga0207645_100567551 353
247 3300025912 Ga0207707_10153089 Ga0207707_101530891 353
248 3300025915 Ga0207693_10087270 Ga0207693_100872702 353
249 3300025915 Ga0207693_10136199 Ga0207693_101361991 353
250 3300025918 Ga0207662_10019360 Ga0207662_100193603 353
251 3300025919 Ga0207657_10038691 Ga0207657_100386914 353
252 3300025929 Ga0207664_10089320 Ga0207664_100893201 353
253 3300025932 Ga0207690_10038702 Ga0207690_100387021 353
254 3300025938 Ga0207704_10272691 Ga0207704_102726911 353
255 3300025939 Ga0207665_10159401 Ga0207665_101594011 353
256 3300025940 Ga0207691_10133435 Ga0207691_101334353 353
257 3300025942 Ga0207689_10026424 Ga0207689_100264247 353
258 3300025942 Ga0207689_10037031 Ga0207689_100370311 353
259 3300025961 Ga0207712_10032174 Ga0207712_100321746 353
260 3300026023 Ga0207677_10175519 Ga0207677_101755192 353
261 3300026078 Ga0207702_10392790 Ga0207702_103927901 353
262 3300026095 Ga0207676_10183981 Ga0207676_101839811 353
263 3300026118 Ga0207675_100022981 Ga0207675_1000229811 353
264 3300026118 Ga0207675_100039674 Ga0207675_1000396742 353
265 3300028666 Ga0265336_10023775 Ga0265336_100237752 353
266 3300028800 Ga0265338_10001308 Ga0265338_1000130837 353
267 3300034957 Ga0373938_0020339 Ga0373938_0020339_174_1241 353
268 3300035084 Ga0373928_0012502 Ga0373928_0012502_75_1142 353
269 3300035085 Ga0373929_0011857 Ga0373929_0011857_213_1280 353
270 3300035113 Ga0373936_0103277 Ga0373936_0103277_106_1173 353
271 3300035171 Ga0373946_0070072 Ga0373946_0070072_297_1364 353
272 3300035172 Ga0373955_0047002 Ga0373955_0047002_363_1430 353
273 3300035410 Ga0373924_0086905 Ga0373924_0086905_154_1221 353
274 3300035695 Ga0373927_0200139 Ga0373927_0200139_138_1205 353
275 3300035724 Ga0373933_0199771 Ga0373933_0199771_120_1187 353
276 3300036401 Ga0373937_0202828 Ga0373937_0202828_337_1404 353
277 3300036401 Ga0373937_0373777 Ga0373937_0373777_54_1121 353
278 3300037068 Ga0373925_0199104 Ga0373925_0199104_156_1223 353
279 3300037068 Ga0373925_0392908 Ga0373925_0392908_11_1078 353
280 3300037312 Ga0395899_0084282 Ga0395899_0084282_221_1300 353
281 3300037312 Ga0395899_0087252 Ga0395899_0087252_159_1238 353
282 3300037418 Ga0395900_0148877 Ga0395900_0148877_1013_2095 353
283 3300037418 Ga0395900_0159392 Ga0395900_0159392_280_1359 353
284 3300037466 Ga0395898_0006364 Ga0395898_0006364_11256_12338 353
285 3300037466 Ga0395898_0097508 Ga0395898_0097508_543_1622 353
286 3300037471 Ga0395905_0031432 Ga0395905_0031432_276_1358 353
287 3300037471 Ga0395905_0064395 Ga0395905_0064395_56_1132 353
288 3300037471 Ga0395905_0075720 Ga0395905_0075720_1662_2741 353
289 3300038443 Ga0395901_0126341 Ga0395901_0126341_324_1403 353
290 3300038443 Ga0395901_0145356 Ga0395901_0145356_1137_2213 353
291 3300038443 Ga0395901_0150976 Ga0395901_0150976_564_1643 353
292 3300038443 Ga0395901_0170934 Ga0395901_0170934_995_2077 353
293 3300046454 Ga0495592_0068465 Ga0495592_0068465_147_1214 353
294 3300046462 Ga0495651_0013969 Ga0495651_0013969_2790_3857 353
295 3300046463 Ga0495653_0232988 Ga0495653_0232988_27_1094 353
296 3300046475 Ga0495639_0084518 Ga0495639_0084518_112_1179 353
297 3300046477 Ga0495664_0096211 Ga0495664_0096211_130_1197 353
298 3300046511 Ga0495608_0158423 Ga0495608_0158423_230_1297 353
299 3300046526 Ga0495666_0101499 Ga0495666_0101499_105_1172 353
300 3300046529 Ga0495652_0020751 Ga0495652_0020751_627_1694 353
301 3300046529 Ga0495652_0115159 Ga0495652_0115159_186_1253 353
302 3300046529 Ga0495652_0185490 Ga0495652_0185490_237_1304 353
303 3300046533 Ga0495640_0159962 Ga0495640_0159962_245_1312 353
304 3300046559 Ga0495667_0007420 Ga0495667_0007420_3931_4998 353
305 3300046642 Ga0495634_0078126 Ga0495634_0078126_401_1468 353
306 3300046663 Ga0495635_0051173 Ga0495635_0051173_36_1103 353
307 3300046663 Ga0495635_0099896 Ga0495635_0099896_290_1357 353
308 3300046663 Ga0495635_0159863 Ga0495635_0159863_122_1189 353
309 3300046678 Ga0495599_0122381 Ga0495599_0122381_62_1129 353
310 3300046678 Ga0495599_0135099 Ga0495599_0135099_107_1174 353
311 3300046678 Ga0495599_0153327 Ga0495599_0153327_309_1376 353
312 3300046679 Ga0495623_0190405 Ga0495623_0190405_58_1125 353
313 3300047315 Ga0495581_0137413 Ga0495581_0137413_135_1202 353
314 3300047319 Ga0495674_0043190 Ga0495674_0043190_1266_2333 353
315 3300047319 Ga0495674_0066089 Ga0495674_0066089_880_1947 353
316 3300047319 Ga0495674_0207140 Ga0495674_0207140_271_1338 353
317 3300047321 Ga0495676_0133314 Ga0495676_0133314_390_1457 353
318 3300047322 Ga0495680_0052983 Ga0495680_0052983_111_1178 353
319 3300047322 Ga0495680_0199536 Ga0495680_0199536_120_1187 353
320 3300047444 Ga0495675_0050789 Ga0495675_0050789_1292_2359 353
321 3300047471 Ga0495684_0030182 Ga0495684_0030182_1020_2087 353
322 3300047471 Ga0495684_0042010 Ga0495684_0042010_747_1814 353
323 3300047471 Ga0495684_0132620 Ga0495684_0132620_497_1564 353
324 3300048906 Ga0496103_0021360 Ga0496103_0021360_10_1077 353
325 3300048910 Ga0496107_0029276 Ga0496107_0029276_239_1306 353
326 3300048911 Ga0496108_0002662 Ga0496108_0002662_7991_9058 353
327 3300048916 Ga0496113_0024147 Ga0496113_0024147_365_1432 353
328 3300048917 Ga0496114_0136065 Ga0496114_0136065_877_1944 353
329 3300048918 Ga0496115_0022200 Ga0496115_0022200_3610_4677 353
330 3300053077 Ga0495601_0208929 Ga0495601_0208929_18_1085 353
331 3300005439 Ga0070711_100187103 Ga0070711_1001871031 355
332 3300025916 Ga0207663_10134932 Ga0207663_101349322 355
333 3300005435 Ga0070714_100075772 Ga0070714_1000757724 356
334 3300006871 Ga0075434_100014551 Ga0075434_1000145516 356
335 3300007076 Ga0075435_100047003 Ga0075435_1000470033 356
336 3300025928 Ga0207700_10126042 Ga0207700_101260421 356
337 3300031616 Ga0307508_10217023 Ga0307508_102170231 357
338 3300044656 Ga0466969_0105576 Ga0466969_0105576_156_1229 357
339 3300044684 Ga0466966_0190360 Ga0466966_0190360_104_1177 357
340 3300044719 Ga0466971_0005087 Ga0466971_0005087_4216_5289 357
341 3300046462 Ga0495651_0051874 Ga0495651_0051874_912_1985 357
342 3300046516 Ga0495628_0011496 Ga0495628_0011496_1574_2647 357
343 3300046516 Ga0495628_0012920 Ga0495628_0012920_4674_5747 357
344 3300046543 Ga0495645_0124982 Ga0495645_0124982_425_1498 357
345 3300047317 Ga0495604_0019977 Ga0495604_0019977_2229_3302 357
346 3300061719 Ga0466962_0018110 Ga0466962_0018110_1914_2987 357
347 3300003320 rootH2_10033794 rootH2_100337944 359

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13683

rve_3

Integrase core domain

322

388

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k9j-assembly3.cif.gz_B transposase domain of metnase 0.7809 164 308
3k9k-assembly3.cif.gz_B transposase domain of metnase 0.7707 164 308
7ue1-assembly1.cif.gz_B hiv-1 integrase catalytic core domain mutant (kgd) in complex with inhibitor grl-142 0.7604 172 314
7ku7-assembly1.cif.gz_F cryo-em structure of rous sarcoma virus cleaved synaptic complex (csc) with hiv-1 integrase strand transfer inhibitor mk-2048. cluster identified by 3-dimensional variability analysis in cryosparc. 0.7573 172 286
6bk1-assembly1.cif.gz_A crystal structure of os79 t291v from o. sativa in complex with udp. 0.7543 215 264
ID Description Score Start End Superfamily
af_P19769_115_278_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8638 172 314 3.30.420.10
af_P0CF80_124_283_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8583 172 308 3.30.420.10
af_Q54AS8_1093_1293_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8535 174 286 3.30.420.10
af_P9WKH9_102_261_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.842 172 317 3.30.420.10
af_P0CF56_119_291_3.30.420.10 Alpha Beta;2-Layer Sandwich;Nucleotidyltransferase; domain 5;Ribonuclease H-like superfamily/Ribonuclease H 0.8347 172 320 3.30.420.10
ID Description Score Start End GO Terms
AF-A0A534ZLX7-F1-model_v4 Integrase 0.968 176 259
AF-A0A1I6FGS3-F1-model_v4 Integrase catalytic domain-containing protein 0.9589 175 273 GO:0003676
GO:0015074
AF-A0A1G9PN29-F1-model_v4 Integrase core domain-containing protein 0.9482 180 308 GO:0003676
GO:0015074
AF-A0A2X3KYV5-F1-model_v4 deleted 0.9454 175 270
AF-A0A534ZLX7-F1-model_v4 Integrase 0.9351 176 259

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pLDDT pTM Quality
75.54 0.52 Medium
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Predicted Structure (AlphaFold2)

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