F416595

General Info

Members Datasets Scaffolds Average Seq Length
345 247 690 432

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919171160|2919176452
Length 480
Sequence AIPATICLFFGVDSWSRSTQYYYIVYIKAQAEEASATGTEDTAMNKPQPASSQQIFDSAMAAIELDVEVAVGDLARMVEIDTSFPPGLGYGAFADLMAELLAPLGFEFERVVVPRDLWYVAGGPASGERTNLVATRETGKPVCGLYYHVDTVPVAPGWSRDPLKLTVDGDHLFGLGAADMKGTIAATLLALRAAKKCGLPLYYDPMLLLCTDEEGGLYPGIRYLAEQGMLKGHIVNFNGSAAPRIWAGCFGVFHLQVTILGRAVHAGEGNRTGAGINAIEGALPVLNALTALKPDVASRASALKPPPHASGPLRPQLSISAVNGGTAGGQVPAEIKILVSRRYAPEESYEAARAEIESLIRDSIAGMGLGLEIDLVGHLIPTDDPEGPHWPRWQKALSLGFGYKPEDFQKWGAASCSDFGYVQKAGFTQEVLLGGLGRPESCIHSPEEHTTRQDVIALAKSILAYLAADFAADSIPENRV

Samples

Sample ID Description Type Environment
1 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
4 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
5 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
6 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
7 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
10 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
11 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
12 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
13 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
14 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
15 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
16 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
17 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
28 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
34 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
38 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
39 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
40 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
45 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
46 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
47 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
52 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
53 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
54 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
55 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
56 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
57 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
58 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
60 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
61 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
62 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
63 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
67 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
68 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
70 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
85 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
88 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
89 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
90 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
91 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
92 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
96 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
97 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
98 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
99 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
100 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
101 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
102 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
103 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
104 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
105 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
106 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
107 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
108 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
109 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
110 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
111 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
112 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
113 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
114 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
115 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
116 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
117 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
118 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
119 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
120 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
121 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
122 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
125 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
126 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
127 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
128 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
131 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
132 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
133 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
134 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
135 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
136 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
137 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
138 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
141 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
147 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
148 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
149 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
150 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
151 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
152 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
155 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
160 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
161 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
163 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
168 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
169 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
170 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
171 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
172 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
173 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
174 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
175 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
176 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
177 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
178 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
179 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
182 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
183 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
184 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
185 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
186 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
187 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
188 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
189 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
190 2510461076 Rhizobium leguminosarum bv. trifolii TA1 Isolate Nodule
191 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
192 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
193 2511231025 Pantoea sp. YR343 Isolate Rhizosphere
194 2511231028 Bradyrhizobium sp. YR681 Isolate Rhizosphere
195 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
196 2513237144 Rhizobium sullae WSM1592 Isolate Nodule
197 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
198 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
199 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
200 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
201 2582581316 Agrobacterium rhizogenes OK036 Isolate Rhizosphere
202 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
203 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
204 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
205 2585427591 Rahnella aquatilis OV744 Isolate Rhizosphere
206 2585427592 Rahnella aquatilis OV588 Isolate Rhizosphere
207 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
208 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
209 2585427633 Neorhizobium galegae bv. officinalis HAMBI 1141 Isolate Nodule
210 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
211 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
212 2599185212 Pseudomonas sp. NFACC15-1 Isolate Rhizoplane
213 2599185236 Rhizobium sp. NFR07 Isolate Rhizoplane
214 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
215 2599185318 Pseudomonas sp. NFACC13-1 Isolate Rhizoplane
216 2599185322 Pseudomonas sp. NFACC14 Isolate Rhizoplane
217 2600254933 Rhizobium sp. NFR12 Isolate Rhizoplane
218 2615840698 Rhizobium multihospitium HAMBI 2975 Isolate Nodule
219 2667528173 Rahnella sp. NFIX50 Isolate Rhizoplane
220 2671180139 Chelativorans sp. A52C2 Isolate Unclassified
221 2738541293 Rhizobium sp. GV031 Isolate Unclassified
222 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
223 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
224 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
225 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
226 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
227 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
228 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
229 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
230 2851182111 Bosea sp. Tri-44 Isolate Nodule
231 2852387548 Rhizobium jaguaris CCGE525 Isolate Unclassified
232 2854601825 Dickeya dianthicola SS70 Isolate Stem Tuber
233 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
234 2874628541 Bradyrhizobium betae Opo-243 Isolate Unclassified
235 2876601092 Pantoea endophytica 596 Isolate Unclassified
236 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
237 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
238 2939602548 Pantoea dispersa 1175 Isolate Rhizosphere
239 2989771324 Rhizobium rhizolycopersici DBTS2 Isolate Rhizosphere
240 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
241 8005645114 Rhizobium tropici IGFRI Rhizo-19 Isolate Rhizosphere
242 8005682033 Rhizobium dioscoreae S-93 Isolate Unclassified
243 8016583857 Bradyrhizobium sp. LM2.7 Isolate Nodule
244 8016733728 Pantoea sp. SORGH_AS 659 Isolate Unclassified
245 8019499862 Kluyvera sp. 1366 Isolate Rhizosphere
246 8054002106 Azospirillum lipoferum 59b Isolate Unclassified
247 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 82.9
Metatranscriptomes 0
Isolates 17.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 25.22
Nodule 4.35
Rhizoplane 6.09
Rhizosphere 37.97
Stem 0
Stem Tuber 0.29
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000017 3300002704 Bacteria 159274
2 JGI25156J39149_1000034 3300002705 Bacteria 114036
3 JGI25154J39366_1000034 3300002738 Bacteria 176764
4 JGI25157J39369_1000092 3300002741 Bacteria 76674
5 JGI25150J39212_1000092 3300002774 Bacteria 51251
6 JGI25159J45721_1001426 3300002987 Bacteria 9905
7 JGI25151J46595_10000007 3300003187 Bacteria 411751
8 rootH1_10027540 3300003316 Bacteria 8158
9 rootH2_10004750 3300003320 Bacteria 19634
10 rootL2_10072415 3300003322 Bacteria 15246
11 rootH1_10025056 3300003323 Bacteria 9434
12 rootH1_10081906 3300003323 Bacteria 4029
13 rootH1_10118905 3300003323 Bacteria 5049
14 JGI25160J50197_1000030 3300003354 Bacteria 177919
15 JGI25161J50226_1000016 3300003374 Bacteria 177919
16 Ga0055526_1000213 3300003771 Bacteria 50112
17 Ga0055524_1000014 3300003775 Bacteria 259417
18 Ga0058692_1004582 3300003856 Bacteria 4076
19 Ga0055543_1000006 3300004625 Bacteria 214206
20 Ga0055543_1000974 3300004625 Bacteria 12972
21 Ga0065165_1000162 3300005262 Bacteria 116822
22 Ga0065165_1000189 3300005262 Bacteria 108538
23 Ga0065165_1000560 3300005262 Bacteria 55357
24 Ga0065704_10079690 3300005289 Bacteria 4102
25 Ga0070658_10104588 3300005327 Bacteria 2342
26 Ga0070671_100005873 3300005355 Bacteria 9778
27 Ga0070667_100096006 3300005367 Bacteria 2556
28 Ga0070665_100070425 3300005548 Bacteria 3504
29 Ga0068857_100041937 3300005577 Bacteria 4058
30 Ga0068854_100054083 3300005578 Bacteria 2886
31 Ga0068856_100049686 3300005614 Bacteria 4134
32 Ga0068856_100117203 3300005614 Bacteria 2664
33 Ga0068852_100064568 3300005616 Bacteria 3191
34 Ga0068851_10032532 3300005834 Bacteria 2595
35 Ga0068860_100109942 3300005843 Bacteria 2634
36 Ga0081455_10000164 3300005937 Bacteria 81995
37 Ga0081539_10003942 3300005985 Bacteria 17196
38 Ga0075365_10005888 3300006038 Bacteria 6673
39 Ga0075365_10038081 3300006038 Bacteria 3124
40 Ga0075368_10001124 3300006042 Bacteria 8439
41 Ga0075362_10022440 3300006177 Bacteria 2659
42 Ga0075369_10001345 3300006186 Bacteria 8354
43 Ga0075366_10020837 3300006195 Bacteria 3807
44 Ga0075370_10003293 3300006353 Bacteria 7660
45 Ga0079104_1000086 3300006946 Bacteria 136260
46 Ga0105250_10002361 3300009092 Bacteria 9536
47 Ga0105240_10000259 3300009093 Bacteria 105008
48 Ga0105241_10026249 3300009174 Bacteria 4332
49 Ga0105237_10027274 3300009545 Bacteria 5831
50 Ga0105238_10165285 3300009551 Bacteria 2188
51 Ga0105239_10000127 3300010375 Bacteria 107869
52 Ga0105239_10011125 3300010375 Bacteria 10044
53 Ga0105239_10012528 3300010375 Bacteria 9445
54 Ga0105246_10022903 3300011119 Bacteria 4037
55 Ga0105246_10035773 3300011119 Bacteria 3321
56 Ga0157373_10002177 3300013100 Bacteria 14840
57 Ga0157371_10005447 3300013102 Bacteria 10727
58 Ga0157371_10007222 3300013102 Bacteria 9023
59 Ga0157369_10107745 3300013105 Bacteria 2964
60 Ga0163162_10040846 3300013306 Bacteria 4640
61 Ga0163162_10273467 3300013306 Bacteria 1821
62 Ga0157372_10126913 3300013307 Bacteria 2933
63 Ga0163163_10008544 3300014325 Bacteria 9102
64 Ga0213872_10037431 3300021361 Bacteria 2215
65 Ga0213875_10000332 3300021388 Bacteria 44937
66 Ga0213875_10034314 3300021388 Bacteria 2395
67 Ga0209435_100023 3300025206 Bacteria 201972
68 Ga0207425_1000018 3300025245 Bacteria 411841
69 Ga0209646_1000080 3300025246 Bacteria 201975
70 Ga0209026_1000076 3300025250 Bacteria 201975
71 Ga0209677_100277 3300025253 Bacteria 34190
72 Ga0209677_104246 3300025253 Bacteria 4224
73 Ga0209759_1000059 3300025256 Bacteria 201975
74 Ga0209129_1000026 3300025258 Bacteria 411839
75 Ga0209233_1000139 3300025261 Bacteria 197070
76 Ga0209233_1001039 3300025261 Bacteria 11690
77 Ga0209233_1005178 3300025261 Bacteria 4354
78 Ga0209455_1001605 3300025272 Bacteria 9925
79 Ga0209130_1000053 3300025284 Bacteria 214421
80 Ga0209130_1000106 3300025284 Bacteria 134559
81 Ga0209675_1001352 3300025291 Bacteria 14469
82 Ga0209025_1000035 3300025294 Bacteria 411841
83 Ga0209025_1001423 3300025294 Bacteria 31630
84 Ga0209564_1000082 3300025295 Bacteria 261494
85 Ga0209758_1000040 3300025297 Bacteria 411841
86 Ga0209758_1000426 3300025297 Bacteria 71250
87 Ga0209758_1023164 3300025297 Bacteria 2818
88 Ga0209256_1000033 3300025299 Bacteria 393924
89 Ga0209256_1000247 3300025299 Bacteria 96046
90 Ga0209256_1017089 3300025299 Bacteria 2430
91 Ga0207426_1000054 3300025302 Bacteria 384435
92 Ga0207426_1009787 3300025302 Bacteria 3764
93 Ga0209051_1019018 3300025303 Bacteria 3015
94 Ga0209257_1009847 3300025304 Bacteria 4995
95 Ga0207656_10022498 3300025321 Bacteria 2530
96 Ga0207696_1000253 3300025711 Bacteria 70074
97 Ga0207696_1002278 3300025711 Bacteria 9536
98 Ga0207647_10004337 3300025904 Bacteria 10516
99 Ga0207705_10039979 3300025909 Bacteria 3361
100 Ga0207654_10013675 3300025911 Bacteria 4179
101 Ga0207695_10000180 3300025913 Bacteria 185504
102 Ga0207671_10000132 3300025914 Bacteria 115312
103 Ga0207671_10079496 3300025914 Bacteria 2457
104 Ga0207703_10036733 3300026035 Bacteria 3900
105 Ga0207703_10089158 3300026035 Bacteria 2590
106 Ga0207678_10017928 3300026067 Bacteria 6219
107 Ga0207702_10035809 3300026078 Bacteria 4150
108 Ga0207641_10026584 3300026088 Bacteria 4778
109 Ga0207674_10066445 3300026116 Bacteria 3633
110 Ga0209281_1000214 3300027111 Bacteria 128147
111 Ga0209371_1005971 3300027312 Bacteria 4664
112 Ga0268266_10029926 3300028379 Bacteria 4628
113 Ga0265337_1010261 3300028556 Bacteria 3291
114 Ga0265319_1005448 3300028563 Bacteria 6084
115 Ga0265323_10000653 3300028653 Bacteria 18908
116 Ga0265336_10000104 3300028666 Bacteria 64094
117 Ga0265338_10000776 3300028800 Bacteria 54431
118 Ga0307516_10010802 3300031730 Bacteria 9992
119 Ga0307405_10001340 3300031731 Bacteria 10318
120 Ga0307412_10075291 3300031911 Bacteria 2315
121 Ga0307510_10012125 3300033180 Bacteria 10217
122 Ga0436364_0193008 3300037853 Bacteria 48408
123 Ga0436364_0482498 3300037853 Bacteria 33506
124 Ga0436365_0823239 3300039437 Bacteria 8085
125 Ga0436365_1914230 3300039437 Bacteria 3435
126 Ga0436361_0044193 3300039447 Bacteria 3178
127 Ga0436361_1051558 3300039447 Bacteria 3039
128 Ga0436363_0820743 3300039450 Bacteria 36570
129 Ga0439438_000018 3300041405 Bacteria 123959
130 Ga0439447_004701 3300041407 Bacteria 4656
131 Ga0451833_0517788 3300041491 Bacteria 2578
132 Ga0451845_0438073 3300041501 Bacteria 18478
133 Ga0451849_0251889 3300041505 Bacteria 6992
134 Ga0439432_001889 3300042006 Bacteria 7894
135 Ga0495627_000009 3300046453 Bacteria 463964
136 Ga0495591_000016 3300046458 Bacteria 244927
137 Ga0495638_0002747 3300046460 Bacteria 14138
138 Ga0495653_0001632 3300046463 Bacteria 17606
139 Ga0495650_0000117 3300046471 Bacteria 188679
140 Ga0495605_0000228 3300046474 Bacteria 69067
141 Ga0495585_0000284 3300046492 Bacteria 50818
142 Ga0495585_0095038 3300046492 Bacteria 1601
143 Ga0495607_0000016 3300046501 Bacteria 177613
144 Ga0495607_0004471 3300046501 Bacteria 10255
145 Ga0495583_0036416 3300046506 Bacteria 2341
146 Ga0495606_0002436 3300046507 Bacteria 21631
147 Ga0495606_0002754 3300046507 Bacteria 19712
148 Ga0495606_0053928 3300046507 Bacteria 2606
149 Ga0495610_0010297 3300046512 Bacteria 5822
150 Ga0495610_0017292 3300046512 Bacteria 4116
151 Ga0495616_0029354 3300046513 Bacteria 2905
152 Ga0495620_0022368 3300046515 Bacteria 3046
153 Ga0495620_0031154 3300046515 Bacteria 2447
154 Ga0495631_0005120 3300046518 Bacteria 6907
155 Ga0495631_0045525 3300046518 Bacteria 1932
156 Ga0495637_0005424 3300046520 Bacteria 6505
157 Ga0495643_0008142 3300046522 Bacteria 6672
158 Ga0495648_0087435 3300046524 Bacteria 1755
159 Ga0495648_0096949 3300046524 Bacteria 1637
160 Ga0495654_0000147 3300046530 Bacteria 72993
161 Ga0495597_0000002 3300046542 Bacteria 420382
162 Ga0495668_0002950 3300046616 Bacteria 13399
163 Ga0495668_0016911 3300046616 Bacteria 4236
164 Ga0495668_0031719 3300046616 Bacteria 2978
165 Ga0495625_0030177 3300046660 Bacteria 4048
166 Ga0495661_0000007 3300046665 Bacteria 411832
167 Ga0495588_0001899 3300046674 Bacteria 8920
168 Ga0495649_0000027 3300046694 Bacteria 164157
169 Ga0495649_0010265 3300046694 Bacteria 5529
170 Ga0495660_0000632 3300046810 Bacteria 27409
171 Ga0495660_0002930 3300046810 Bacteria 10683
172 Ga0495672_0010767 3300047320 Bacteria 6490
173 Ga0495672_0020728 3300047320 Bacteria 4302
174 Ga0495672_0109335 3300047320 Bacteria 1486
175 Ga0495676_0019684 3300047321 Bacteria 5933
176 Ga0495687_003664 3300047443 Bacteria 10941
177 Ga0495681_0022699 3300047470 Bacteria 3351
178 Ga0496100_0029643 3300048903 Bacteria 3387
179 Ga0496101_0000006 3300048904 Bacteria 329135
180 Ga0496102_0015437 3300048905 Bacteria 6652
181 Ga0496103_0010710 3300048906 Bacteria 5425
182 Ga0496104_0017236 3300048907 Bacteria 6573
183 Ga0496105_0067669 3300048908 Bacteria 2949
184 Ga0496107_0134690 3300048910 Bacteria 1825
185 Ga0496108_0154610 3300048911 Bacteria 1980
186 Ga0496109_0031663 3300048912 Bacteria 4749
187 Ga0496110_0338394 3300048913 Bacteria 1371
188 Ga0496111_0008280 3300048914 Bacteria 6875
189 Ga0496111_0040976 3300048914 Bacteria 3322
190 Ga0496112_0002484 3300048915 Bacteria 14880
191 Ga0496113_0013662 3300048916 Bacteria 5512
192 Ga0496116_0018797 3300048919 Bacteria 5310
193 Ga0496117_0004870 3300048920 Bacteria 14490
194 Ga0496117_0017072 3300048920 Bacteria 6079
195 Ga0496117_0069164 3300048920 Bacteria 2379
196 Ga0496118_0013528 3300048921 Bacteria 7710
197 Ga0496118_0020330 3300048921 Bacteria 5889
198 Ga0496119_0005299 3300048922 Bacteria 12416
199 Ga0496119_0018483 3300048922 Bacteria 5185
200 Ga0496119_0034219 3300048922 Bacteria 3352
201 Ga0496119_0061940 3300048922 Bacteria 2231
202 Ga0496119_0068290 3300048922 Bacteria 2093
203 Ga0496120_0000333 3300048923 Bacteria 78840
204 Ga0496120_0010461 3300048923 Bacteria 6471
205 Ga0496120_0017606 3300048923 Bacteria 4624
206 Ga0496120_0029341 3300048923 Bacteria 3359
207 Ga0496121_0005372 3300048924 Bacteria 16467
208 Ga0496121_0013005 3300048924 Bacteria 8993
209 Ga0496121_0073941 3300048924 Bacteria 2728
210 Ga0496121_0074661 3300048924 Bacteria 2711
211 Ga0496121_0086933 3300048924 Bacteria 2455
212 Ga0496122_0000150 3300048925 Bacteria 162697
213 Ga0496122_0006683 3300048925 Bacteria 13133
214 Ga0496122_0008286 3300048925 Bacteria 11272
215 Ga0496122_0019401 3300048925 Bacteria 6213
216 Ga0496122_0025507 3300048925 Bacteria 5130
217 Ga0496122_0051228 3300048925 Bacteria 3139
218 Ga0496122_0126412 3300048925 Bacteria 1635
219 Ga0496123_0000021 3300048926 Bacteria 378760
220 Ga0496123_0005694 3300048926 Bacteria 12422
221 Ga0496123_0008078 3300048926 Bacteria 9734
222 Ga0496123_0057836 3300048926 Bacteria 2520
223 Ga0496123_0081574 3300048926 Bacteria 1965
224 Ga0496123_0085515 3300048926 Bacteria 1897
225 Ga0496124_0000253 3300048927 Bacteria 103586
226 Ga0496124_0003065 3300048927 Bacteria 20828
227 Ga0496124_0013905 3300048927 Bacteria 7824
228 Ga0496124_0028137 3300048927 Bacteria 5031
229 Ga0496124_0030942 3300048927 Bacteria 4741
230 Ga0496125_0000063 3300048928 Bacteria 250260
231 Ga0496125_0005003 3300048928 Bacteria 14965
232 Ga0496125_0024374 3300048928 Bacteria 5565
233 Ga0496125_0026142 3300048928 Bacteria 5330
234 Ga0496125_0027826 3300048928 Bacteria 5115
235 Ga0496125_0147258 3300048928 Bacteria 1625
236 Ga0496126_0010687 3300048929 Bacteria 9593
237 Ga0496126_0049985 3300048929 Bacteria 3814
238 Ga0496126_0090567 3300048929 Bacteria 2691
239 Ga0495678_011413 3300049459 Bacteria 4258
240 Ga0495682_0010554 3300049460 Bacteria 3573
241 Ga0501047_0156822 3300049581 Bacteria 2150
242 Ga0501238_002124 3300049671 Bacteria 2338
243 nmdc:mga03683_1712_c3 3300050489 Bacteria 2113
244 nmdc:mga0yw44_34571_c1 3300050492 Bacteria 2963
245 nmdc:mga0k408_25828_c1 3300050493 Bacteria 3328
246 nmdc:mga07m45_2398_c1 3300050496 Bacteria 8788
247 Ga0500610_0052327 3300053079 Bacteria 2127
248 Ga0500647_0077427 3300053091 Bacteria 1595
249 Ga0500651_0050342 3300053093 Bacteria 2615
250 Ga0500557_000013 3300053105 Bacteria 108649
251 Ga0500557_000577 3300053105 Bacteria 4989
252 Ga0500569_002047 3300053109 Bacteria 3920
253 Ga0500572_000707 3300053111 Bacteria 10828
254 Ga0500618_000134 3300053125 Bacteria 62033
255 Ga0500618_000809 3300053125 Bacteria 17230
256 Ga0500618_001005 3300053125 Bacteria 14223
257 Ga0500618_003095 3300053125 Bacteria 5882
258 Ga0500618_003316 3300053125 Bacteria 5572
259 Ga0500618_004078 3300053125 Bacteria 4785
260 Ga0500618_009154 3300053125 Bacteria 2719
261 Ga0500642_0000021 3300053130 Bacteria 146938
262 Ga0500642_0007575 3300053130 Bacteria 3656
263 Ga0500652_025500 3300053131 Bacteria 2266
264 Ga0500559_0000223 3300053136 Bacteria 45357
265 Ga0500559_0032192 3300053136 Bacteria 2252
266 Ga0500568_0000147 3300053139 Bacteria 61270
267 Ga0500573_0053861 3300053140 Bacteria 2311
268 Ga0500588_0011919 3300053146 Bacteria 2142
269 Ga0500616_0000134 3300053153 Bacteria 129376
270 Ga0500616_0000482 3300053153 Bacteria 51738
271 Ga0500616_0014324 3300053153 Bacteria 4561
272 Ga0500616_0050095 3300053153 Bacteria 2207
273 Ga0500622_0000207 3300053156 Bacteria 62384
274 Ga0500622_0011852 3300053156 Bacteria 4738
275 Ga0500622_0043895 3300053156 Bacteria 2317
276 Ga0500634_0048484 3300053161 Bacteria 2291
277 Ga0500639_009648 3300053163 Bacteria 5049
278 Ga0500636_0001299 3300053177 Bacteria 13560
279 Ga0500636_0002199 3300053177 Bacteria 10781
280 Ga0500636_0019502 3300053177 Bacteria 4014
281 Ga0500636_0039976 3300053177 Bacteria 2774
282 Ga0500636_0051145 3300053177 Bacteria 2429
283 Ga0500637_0123261 3300053178 Bacteria 1504
284 Ga0500625_008284 3300053729 Bacteria 4579
285 Ga0500645_016489 3300053730 Bacteria 2325
286 Ga0500601_000137 3300053737 Bacteria 14865
287 2919176452 2919171160 Bacteria 6499771
288 2510893194 2510461076 Bacteria 8618824
289 2511136468 2510917022 Bacteria 6504556
290 2511193515 2510917030 Bacteria 7460662
291 2511383005 2511231025 Bacteria 5324661
292 2511400146 2511231028 Bacteria 8046582
293 2511433309 2511231035 Bacteria 5341610
294 2513913338 2513237144 Bacteria 7530820
295 2515645181 2515154114 Bacteria 7848616
296 2517105461 2517093001 Bacteria 9002274
297 2585274834 2582581307 Bacteria 6597605
298 2585282098 2582581308 Bacteria 7413247
299 2585333122 2582581316 Bacteria 7774528
300 2585534633 2585427527 Bacteria 7273426
301 2585556532 2585427530 Bacteria 7383882
302 2585562200 2585427531 Bacteria 6992870
303 2585830236 2585427591 Bacteria 5482980
304 2585834970 2585427592 Bacteria 5370892
305 2585900168 2585427608 Bacteria 6544331
306 2585907947 2585427609 Bacteria 6667127
307 2585992855 2585427633 Bacteria 6413184
308 2586003585 2585427634 Bacteria 6455027
309 2587983367 2585428125 Bacteria 6662905
310 2599616506 2599185212 Bacteria 6765997
311 2599718112 2599185236 Bacteria 6875203
312 2599958381 2599185305 Bacteria 6748700
313 2600038706 2599185318 Bacteria 6961590
314 2600062619 2599185322 Bacteria 6763055
315 2600376192 2600254933 Bacteria 4750527
316 2616555571 2615840698 Bacteria 7319877
317 2671111068 2667528173 Bacteria 5375747
318 2671694854 2671180139 Bacteria 4196045
319 2738799965 2738541293 Bacteria 7065685
320 2819642161 2818991453 Bacteria 7181617
321 2819682662 2818991461 Bacteria 7026071
322 2821126935 2821123053 Bacteria 7836056
323 2838740927 2838736955 Bacteria 5760694
324 2841844767 2841840854 Bacteria 5761912
325 2842144163 2842140634 Bacteria 5759631
326 2842779899 2842775625 Bacteria 5587290
327 2847947123 2847939898 Bacteria 8606328
328 2851184666 2851182111 Bacteria 6047226
329 2852394007 2852387548 Bacteria 8025568
330 2854603818 2854601825 Bacteria 4797592
331 2857536656 2857531043 Bacteria 6754041
332 2874631715 2874628541 Bacteria 8630250
333 2876604714 2876601092 Bacteria 5114497
334 2919102167 2919100787 Bacteria 7710546
335 2929203961 2929199973 Bacteria 7260745
336 2939603701 2939602548 Bacteria 4950493
337 2989775268 2989771324 Bacteria 5605128
338 3005597705 3005594810 Bacteria 8716512
339 8005648684 8005645114 Bacteria 6950293
340 8005686045 8005682033 Bacteria 6726518
341 8016593480 8016583857 Bacteria 10421953
342 8016738841 8016733728 Bacteria 5274317
343 8019500499 8019499862 Bacteria 5169538
344 8054008587 8054002106 Bacteria 7987183
345 8055912979 8055909800 Bacteria 7278581
346 JGI25155J39150_1000017
347 JGI25156J39149_1000034
348 JGI25154J39366_1000034
349 JGI25157J39369_1000092
350 JGI25150J39212_1000092
351 JGI25159J45721_1001426
352 JGI25151J46595_10000007
353 rootH1_10027540
354 rootH2_10004750
355 rootL2_10072415
356 rootH1_10025056
357 rootH1_10081906
358 rootH1_10118905
359 JGI25160J50197_1000030
360 JGI25161J50226_1000016
361 Ga0055526_1000213
362 Ga0055524_1000014
363 Ga0058692_1004582
364 Ga0055543_1000006
365 Ga0055543_1000974
366 Ga0065165_1000162
367 Ga0065165_1000189
368 Ga0065165_1000560
369 Ga0065704_10079690
370 Ga0070658_10104588
371 Ga0070671_100005873
372 Ga0070667_100096006
373 Ga0070665_100070425
374 Ga0068857_100041937
375 Ga0068854_100054083
376 Ga0068856_100049686
377 Ga0068856_100117203
378 Ga0068852_100064568
379 Ga0068851_10032532
380 Ga0068860_100109942
381 Ga0081455_10000164
382 Ga0081539_10003942
383 Ga0075365_10005888
384 Ga0075365_10038081
385 Ga0075368_10001124
386 Ga0075362_10022440
387 Ga0075369_10001345
388 Ga0075366_10020837
389 Ga0075370_10003293
390 Ga0079104_1000086
391 Ga0105250_10002361
392 Ga0105240_10000259
393 Ga0105241_10026249
394 Ga0105237_10027274
395 Ga0105238_10165285
396 Ga0105239_10000127
397 Ga0105239_10011125
398 Ga0105239_10012528
399 Ga0105246_10022903
400 Ga0105246_10035773
401 Ga0157373_10002177
402 Ga0157371_10005447
403 Ga0157371_10007222
404 Ga0157369_10107745
405 Ga0163162_10040846
406 Ga0163162_10273467
407 Ga0157372_10126913
408 Ga0163163_10008544
409 Ga0213872_10037431
410 Ga0213875_10000332
411 Ga0213875_10034314
412 Ga0209435_100023
413 Ga0207425_1000018
414 Ga0209646_1000080
415 Ga0209026_1000076
416 Ga0209677_100277
417 Ga0209677_104246
418 Ga0209759_1000059
419 Ga0209129_1000026
420 Ga0209233_1000139
421 Ga0209233_1001039
422 Ga0209233_1005178
423 Ga0209455_1001605
424 Ga0209130_1000053
425 Ga0209130_1000106
426 Ga0209675_1001352
427 Ga0209025_1000035
428 Ga0209025_1001423
429 Ga0209564_1000082
430 Ga0209758_1000040
431 Ga0209758_1000426
432 Ga0209758_1023164
433 Ga0209256_1000033
434 Ga0209256_1000247
435 Ga0209256_1017089
436 Ga0207426_1000054
437 Ga0207426_1009787
438 Ga0209051_1019018
439 Ga0209257_1009847
440 Ga0207656_10022498
441 Ga0207696_1000253
442 Ga0207696_1002278
443 Ga0207647_10004337
444 Ga0207705_10039979
445 Ga0207654_10013675
446 Ga0207695_10000180
447 Ga0207671_10000132
448 Ga0207671_10079496
449 Ga0207703_10036733
450 Ga0207703_10089158
451 Ga0207678_10017928
452 Ga0207702_10035809
453 Ga0207641_10026584
454 Ga0207674_10066445
455 Ga0209281_1000214
456 Ga0209371_1005971
457 Ga0268266_10029926
458 Ga0265337_1010261
459 Ga0265319_1005448
460 Ga0265323_10000653
461 Ga0265336_10000104
462 Ga0265338_10000776
463 Ga0307516_10010802
464 Ga0307405_10001340
465 Ga0307412_10075291
466 Ga0307510_10012125
467 Ga0436364_0193008
468 Ga0436364_0482498
469 Ga0436365_0823239
470 Ga0436365_1914230
471 Ga0436361_0044193
472 Ga0436361_1051558
473 Ga0436363_0820743
474 Ga0439438_000018
475 Ga0439447_004701
476 Ga0451833_0517788
477 Ga0451845_0438073
478 Ga0451849_0251889
479 Ga0439432_001889
480 Ga0495627_000009
481 Ga0495591_000016
482 Ga0495638_0002747
483 Ga0495653_0001632
484 Ga0495650_0000117
485 Ga0495605_0000228
486 Ga0495585_0000284
487 Ga0495585_0095038
488 Ga0495607_0000016
489 Ga0495607_0004471
490 Ga0495583_0036416
491 Ga0495606_0002436
492 Ga0495606_0002754
493 Ga0495606_0053928
494 Ga0495610_0010297
495 Ga0495610_0017292
496 Ga0495616_0029354
497 Ga0495620_0022368
498 Ga0495620_0031154
499 Ga0495631_0005120
500 Ga0495631_0045525
501 Ga0495637_0005424
502 Ga0495643_0008142
503 Ga0495648_0087435
504 Ga0495648_0096949
505 Ga0495654_0000147
506 Ga0495597_0000002
507 Ga0495668_0002950
508 Ga0495668_0016911
509 Ga0495668_0031719
510 Ga0495625_0030177
511 Ga0495661_0000007
512 Ga0495588_0001899
513 Ga0495649_0000027
514 Ga0495649_0010265
515 Ga0495660_0000632
516 Ga0495660_0002930
517 Ga0495672_0010767
518 Ga0495672_0020728
519 Ga0495672_0109335
520 Ga0495676_0019684
521 Ga0495687_003664
522 Ga0495681_0022699
523 Ga0496100_0029643
524 Ga0496101_0000006
525 Ga0496102_0015437
526 Ga0496103_0010710
527 Ga0496104_0017236
528 Ga0496105_0067669
529 Ga0496107_0134690
530 Ga0496108_0154610
531 Ga0496109_0031663
532 Ga0496110_0338394
533 Ga0496111_0008280
534 Ga0496111_0040976
535 Ga0496112_0002484
536 Ga0496113_0013662
537 Ga0496116_0018797
538 Ga0496117_0004870
539 Ga0496117_0017072
540 Ga0496117_0069164
541 Ga0496118_0013528
542 Ga0496118_0020330
543 Ga0496119_0005299
544 Ga0496119_0018483
545 Ga0496119_0034219
546 Ga0496119_0061940
547 Ga0496119_0068290
548 Ga0496120_0000333
549 Ga0496120_0010461
550 Ga0496120_0017606
551 Ga0496120_0029341
552 Ga0496121_0005372
553 Ga0496121_0013005
554 Ga0496121_0073941
555 Ga0496121_0074661
556 Ga0496121_0086933
557 Ga0496122_0000150
558 Ga0496122_0006683
559 Ga0496122_0008286
560 Ga0496122_0019401
561 Ga0496122_0025507
562 Ga0496122_0051228
563 Ga0496122_0126412
564 Ga0496123_0000021
565 Ga0496123_0005694
566 Ga0496123_0008078
567 Ga0496123_0057836
568 Ga0496123_0081574
569 Ga0496123_0085515
570 Ga0496124_0000253
571 Ga0496124_0003065
572 Ga0496124_0013905
573 Ga0496124_0028137
574 Ga0496124_0030942
575 Ga0496125_0000063
576 Ga0496125_0005003
577 Ga0496125_0024374
578 Ga0496125_0026142
579 Ga0496125_0027826
580 Ga0496125_0147258
581 Ga0496126_0010687
582 Ga0496126_0049985
583 Ga0496126_0090567
584 Ga0495678_011413
585 Ga0495682_0010554
586 Ga0501047_0156822
587 Ga0501238_002124
588 nmdc:mga03683_1712_c3
589 nmdc:mga0yw44_34571_c1
590 nmdc:mga0k408_25828_c1
591 nmdc:mga07m45_2398_c1
592 Ga0500610_0052327
593 Ga0500647_0077427
594 Ga0500651_0050342
595 Ga0500557_000013
596 Ga0500557_000577
597 Ga0500569_002047
598 Ga0500572_000707
599 Ga0500618_000134
600 Ga0500618_000809
601 Ga0500618_001005
602 Ga0500618_003095
603 Ga0500618_003316
604 Ga0500618_004078
605 Ga0500618_009154
606 Ga0500642_0000021
607 Ga0500642_0007575
608 Ga0500652_025500
609 Ga0500559_0000223
610 Ga0500559_0032192
611 Ga0500568_0000147
612 Ga0500573_0053861
613 Ga0500588_0011919
614 Ga0500616_0000134
615 Ga0500616_0000482
616 Ga0500616_0014324
617 Ga0500616_0050095
618 Ga0500622_0000207
619 Ga0500622_0011852
620 Ga0500622_0043895
621 Ga0500634_0048484
622 Ga0500639_009648
623 Ga0500636_0001299
624 Ga0500636_0002199
625 Ga0500636_0019502
626 Ga0500636_0039976
627 Ga0500636_0051145
628 Ga0500637_0123261
629 Ga0500625_008284
630 Ga0500645_016489
631 Ga0500601_000137
632 2919176452
633 2510893194
634 2511136468
635 2511193515
636 2511383005
637 2511400146
638 2511433309
639 2513913338
640 2515645181
641 2517105461
642 2585274834
643 2585282098
644 2585333122
645 2585534633
646 2585556532
647 2585562200
648 2585830236
649 2585834970
650 2585900168
651 2585907947
652 2585992855
653 2586003585
654 2587983367
655 2599616506
656 2599718112
657 2599958381
658 2600038706
659 2600062619
660 2600376192
661 2616555571
662 2671111068
663 2671694854
664 2738799965
665 2819642161
666 2819682662
667 2821126935
668 2838740927
669 2841844767
670 2842144163
671 2842779899
672 2847947123
673 2851184666
674 2852394007
675 2854603818
676 2857536656
677 2874631715
678 2876604714
679 2919102167
680 2929203961
681 2939603701
682 2989775268
683 3005597705
684 8005648684
685 8005686045
686 8016593480
687 8016738841
688 8019500499
689 8054008587
690 8055912979

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

248

366

0.92

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

144

468

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
1q7l-assembly1.cif.gz_A zn-binding domain of the t347g mutant of human aminoacylase-i 0.8364 26 193
4ruh-assembly1.cif.gz_A crystal structure of human carnosinase-2 (cn2) in complex with inhibitor, bestatin at 2.25 a 0.8318 15 423
4g1p-assembly1.cif.gz_A-2 structural and mechanistic basis of substrate recognition by novel di-peptidase dug1p from saccharomyces cerevisiae 0.8316 13 423
4ruh-assembly1.cif.gz_B crystal structure of human carnosinase-2 (cn2) in complex with inhibitor, bestatin at 2.25 a 0.8222 15 423
3pfo-assembly1.cif.gz_B crystal structure of a putative acetylornithine deacetylase (rpa2325) from rhodopseudomonas palustris cga009 at 1.90 a resolution 0.8219 10 423
ID Description Score Start End Superfamily
af_P23908_180_301_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8596 209 334 3.30.70.360
1q7lC00 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8372 26 193 3.40.630.10
af_P23908_180_301_3.30.70.360 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.8209 209 334 3.30.70.360
af_Q2FWN8_3_180_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8208 25 193 3.40.630.10
af_Q57899_2_199_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.8197 24 197 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A7C1R5L6-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9462 16 193 GO:0016787
AF-A0A327YC39-F1-model_v4 deleted 0.9458 6 171
AF-A0A7W4P938-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9275 11 440 GO:0016787
GO:0046872
AF-A0A7W4P938-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9233 11 440 GO:0016787
GO:0046872
AF-A0A536USB1-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.8605 209 420 GO:0016787
GO:0046872

Map