F416304

General Info

Members Datasets Scaffolds Average Seq Length
345 194 335 714

Family's Representative Sequence

Representative Sequence 3300005843|Ga0068860_100005007|Ga0068860_1000050076
Length 774
Sequence MLVNNGKGRQHTIEIIVTFEYKADQRSVGRRPIIEYMHRGWVKFSDKPYPVHSRGMKKVIMYMFNKRNLPIVLLVLGAGVFVAFRTLGLGENPPTKYERILKNVGEMLEQIHYSPKQLDDKFSKEVFGKYLGEVDVEKNVLMQPDVEALRKKFETRIDDEILGNAPVQFVPSVSDIYKKRLAETEALYKDILSKPFNFSENDSVDQNYDKVDFPKNEAERRESWYKRLKYLTLERYSDLLDQQEASKGKPGFVARSNEDLEKEARGKAQKVMDRFYERLKVKVNDDDRFNMYVQTIVQCMDPHTDYFPPVEKRYFDEQMSGHFFGIGASLREEDGNIKITTLVTGSPAWKSGQVQLGDIITKVAQGAQEPVDLTGFQVEDAVKLIRGTKGTEVRLTLRKTDGSTKVISLIRDEIVQDEATFARSAIINSSKGKIGYIYLPEFYADFDNPKGNRCSVDVAREVMKLKEQKVDGIVLDLRFNGGGSLYDVVQMAGLFIDQGPIVQVKDRDGKPQILPDHDKSVLYDGPFAVMVNELSASASEIFAAAIQDYHRGVIIGSTSTYGKGTVQRNLGLDKSMGFMDANSELGTLKVTLQKFYRISGGSTQLRGVASDIVLPDLYEYSKIREKDNPDALPWDEIQKADYTTWKYAYDLNVIKGMSSERMKNNSAFNLIGQDAEWLSKENDKVFPLNLQKYREEQKQIKSTIKQIESLSKLTGSNELNVSALPQDAHKYDGDKDKGDRFQVWLKDKRSDIYLGEAVNVLDDMITQKNLVYNK

Samples

Sample ID Description Type Environment
1 2738541278 Niastella sp. CF465 Isolate Unclassified
2 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
3 2883068021 Chitinophaga rhizosphaerae T16R-86 Isolate Rhizosphere
4 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
5 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
6 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
7 2914759650 Rhizosphaericola mali Isolate Rhizosphere
8 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
9 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
10 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
11 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
12 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
13 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
17 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
20 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
21 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
24 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
25 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
32 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
33 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
34 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
35 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
36 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
42 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
45 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
56 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
57 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
58 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
63 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
70 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
71 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
72 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
73 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
74 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
75 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
76 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
77 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
78 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
79 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
82 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
83 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
84 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
85 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
86 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
87 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
90 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
91 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
92 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
93 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
94 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
95 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
96 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
97 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
136 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
140 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
141 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
142 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
143 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
144 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
145 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
146 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
147 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
148 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
149 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
150 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
151 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
152 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
153 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
154 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
155 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
156 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
157 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
158 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
159 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
160 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
161 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
162 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
163 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
164 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
174 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
175 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
176 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
177 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
178 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
179 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
182 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
185 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
188 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
189 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
190 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
191 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
194 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.1
Metatranscriptomes 0
Isolates 2.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.93
Nodule 0
Rhizoplane 0
Rhizosphere 90.14
Stem 0
Stem Tuber 0
Unclassified 4.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000851 3300002459 Bacteria 7049
2 rootH2_10001980 3300003320 Bacteria 7308
3 rootH2_10073961 3300003320 Bacteria 6648
4 rootH2_10073962 3300003320 Bacteria 6663
5 rootH1_10017103 3300003323 Bacteria 28716
6 Ga0055531_10000020 3300003794 Bacteria 170186
7 Ga0065712_10085760 3300005290 Bacteria 2649
8 Ga0070658_10000095 3300005327 Bacteria 77839
9 Ga0070658_10031307 3300005327 Bacteria 4272
10 Ga0070676_10000580 3300005328 Bacteria 17716
11 Ga0070670_100021103 3300005331 Bacteria 5602
12 Ga0070670_100026587 3300005331 Bacteria 4978
13 Ga0070670_100049701 3300005331 Bacteria 3605
14 Ga0070677_10011786 3300005333 Bacteria 3024
15 Ga0068869_100017897 3300005334 Bacteria 4814
16 Ga0070666_10000192 3300005335 Bacteria 41657
17 Ga0070666_10000494 3300005335 Bacteria 23741
18 Ga0070682_100000280 3300005337 Bacteria 36356
19 Ga0068868_100003595 3300005338 Bacteria 10802
20 Ga0070689_100011747 3300005340 Bacteria 6282
21 Ga0070689_100021301 3300005340 Bacteria 4823
22 Ga0070691_10000594 3300005341 Bacteria 13884
23 Ga0070668_100000482 3300005347 Bacteria 26431
24 Ga0070675_100010293 3300005354 Bacteria 7299
25 Ga0070675_100028986 3300005354 Bacteria 4461
26 Ga0070671_100006495 3300005355 Bacteria 9349
27 Ga0070671_100029060 3300005355 Bacteria 4557
28 Ga0070674_100020217 3300005356 Bacteria 4247
29 Ga0070673_100000101 3300005364 Bacteria 38481
30 Ga0070688_100004819 3300005365 Bacteria 7053
31 Ga0070688_100021819 3300005365 Bacteria 3744
32 Ga0070659_100011390 3300005366 Bacteria 6579
33 Ga0070667_100000086 3300005367 Bacteria 114861
34 Ga0070678_100003002 3300005456 Bacteria 9354
35 Ga0070678_100081153 3300005456 Bacteria 2458
36 Ga0070681_10003291 3300005458 Bacteria 15080
37 Ga0068867_100005671 3300005459 Bacteria 8846
38 Ga0070698_100007534 3300005471 Bacteria 11769
39 Ga0070698_100039869 3300005471 Bacteria 4830
40 Ga0070698_100044157 3300005471 Bacteria 4566
41 Ga0070679_100001119 3300005530 Bacteria 23386
42 Ga0068853_100004421 3300005539 Bacteria 10878
43 Ga0068853_100033252 3300005539 Bacteria 4374
44 Ga0070672_100000376 3300005543 Bacteria 25873
45 Ga0070672_100020985 3300005543 Bacteria 4774
46 Ga0070693_100002261 3300005547 Bacteria 8830
47 Ga0070665_100000031 3300005548 Bacteria 333365
48 Ga0070665_100000350 3300005548 Bacteria 69455
49 Ga0068855_100009740 3300005563 Bacteria 11590
50 Ga0068855_100011501 3300005563 Bacteria 10694
51 Ga0068855_100020864 3300005563 Bacteria 7857
52 Ga0068855_100039061 3300005563 Bacteria 5636
53 Ga0070664_100016897 3300005564 Bacteria 5988
54 Ga0068857_100009222 3300005577 Bacteria 8559
55 Ga0068857_100034114 3300005577 Bacteria 4503
56 Ga0068857_100063382 3300005577 Bacteria 3286
57 Ga0068857_100086848 3300005577 Bacteria 2798
58 Ga0068854_100008051 3300005578 Bacteria 6755
59 Ga0068856_100013913 3300005614 Bacteria 7783
60 Ga0068852_100000740 3300005616 Bacteria 21442
61 Ga0068852_100020234 3300005616 Bacteria 5289
62 Ga0068859_100000186 3300005617 Bacteria 60206
63 Ga0068864_100000207 3300005618 Bacteria 53233
64 Ga0068864_100098711 3300005618 Bacteria 2587
65 Ga0068861_100009031 3300005719 Bacteria 6873
66 Ga0068851_10002890 3300005834 Bacteria 7586
67 Ga0068870_10012557 3300005840 Bacteria 3961
68 Ga0068863_100001390 3300005841 Bacteria 24001
69 Ga0068863_100006286 3300005841 Bacteria 11663
70 Ga0068863_100013780 3300005841 Bacteria 7791
71 Ga0068858_100005064 3300005842 Bacteria 12920
72 Ga0068858_100011450 3300005842 Bacteria 8374
73 Ga0068860_100000072 3300005843 Bacteria 174997
74 Ga0068860_100000781 3300005843 Bacteria 35833
75 Ga0068860_100004574 3300005843 Bacteria 14121
76 Ga0068860_100005007 3300005843 Bacteria 13492
77 Ga0068860_100020065 3300005843 Bacteria 6475
78 Ga0068862_100052933 3300005844 Unclassified 3474
79 Ga0081540_1009563 3300005983 Bacteria 6670
80 Ga0097621_100001612 3300006237 Bacteria 15459
81 Ga0097621_100001772 3300006237 Bacteria 14820
82 Ga0097621_100014970 3300006237 Bacteria 5822
83 Ga0068871_100000563 3300006358 Bacteria 25328
84 Ga0068871_100004585 3300006358 Bacteria 9638
85 Ga0075428_100037024 3300006844 Bacteria 5373
86 Ga0075428_100061087 3300006844 Bacteria 4126
87 Ga0075430_100007471 3300006846 Bacteria 9225
88 Ga0075431_100041362 3300006847 Bacteria 4751
89 Ga0075429_100003534 3300006880 Bacteria 13311
90 Ga0075429_100024383 3300006880 Bacteria 5248
91 Ga0068865_100003933 3300006881 Bacteria 8920
92 Ga0068865_100039661 3300006881 Bacteria 3195
93 Ga0068865_100060140 3300006881 Bacteria 2659
94 Ga0097620_100000186 3300006931 Bacteria 60206
95 Ga0105240_10000319 3300009093 Bacteria 91429
96 Ga0105240_10000852 3300009093 Bacteria 54967
97 Ga0105240_10001362 3300009093 Bacteria 41962
98 Ga0105240_10001529 3300009093 Bacteria 39339
99 Ga0105240_10001537 3300009093 Bacteria 39153
100 Ga0105240_10010681 3300009093 Bacteria 12885
101 Ga0105240_10032771 3300009093 Bacteria 6722
102 Ga0105240_10058198 3300009093 Bacteria 4825
103 Ga0105240_10075837 3300009093 Bacteria 4147
104 Ga0111539_10005231 3300009094 Bacteria 16809
105 Ga0111539_10043668 3300009094 Bacteria 5372
106 Ga0111539_10101963 3300009094 Bacteria 3369
107 Ga0111539_10139349 3300009094 Bacteria 2840
108 Ga0105247_10000640 3300009101 Bacteria 28018
109 Ga0105247_10019106 3300009101 Bacteria 4115
110 Ga0114129_10055254 3300009147 Bacteria 5565
111 Ga0114129_10102179 3300009147 Bacteria 3965
112 Ga0105241_10000189 3300009174 Bacteria 46170
113 Ga0105241_10002592 3300009174 Bacteria 13558
114 Ga0105242_10012438 3300009176 Bacteria 6551
115 Ga0105248_10020786 3300009177 Bacteria 7272
116 Ga0105248_10029875 3300009177 Bacteria 6082
117 Ga0105237_10002550 3300009545 Bacteria 22531
118 Ga0105237_10010941 3300009545 Bacteria 9628
119 Ga0105237_10015423 3300009545 Bacteria 7953
120 Ga0105237_10025066 3300009545 Bacteria 6101
121 Ga0105237_10062556 3300009545 Bacteria 3721
122 Ga0105237_10072793 3300009545 Bacteria 3430
123 Ga0105249_10001561 3300009553 Bacteria 20115
124 Ga0105249_10005620 3300009553 Bacteria 10847
125 Ga0105249_10011477 3300009553 Bacteria 7781
126 Ga0105249_10012208 3300009553 Bacteria 7566
127 Ga0105239_10000101 3300010375 Bacteria 119610
128 Ga0105239_10000564 3300010375 Bacteria 53130
129 Ga0105239_10001192 3300010375 Bacteria 35572
130 Ga0105239_10046817 3300010375 Bacteria 4739
131 Ga0105239_10062809 3300010375 Bacteria 4077
132 Ga0105239_10129360 3300010375 Bacteria 2807
133 Ga0105246_10014215 3300011119 Bacteria 5003
134 Ga0105246_10047760 3300011119 Bacteria 2925
135 Ga0157373_10010591 3300013100 Bacteria 6784
136 Ga0157371_10002123 3300013102 Bacteria 19298
137 Ga0157371_10004534 3300013102 Bacteria 12097
138 Ga0157371_10016279 3300013102 Bacteria 5554
139 Ga0157370_10000175 3300013104 Bacteria 79713
140 Ga0157370_10005368 3300013104 Bacteria 14390
141 Ga0157370_10060708 3300013104 Bacteria 3588
142 Ga0157369_10015802 3300013105 Bacteria 8503
143 Ga0157374_10000002 3300013296 Bacteria 1054226
144 Ga0157374_10000084 3300013296 Bacteria 94138
145 Ga0157374_10040385 3300013296 Bacteria 4297
146 Ga0157378_10002717 3300013297 Bacteria 15754
147 Ga0157378_10014983 3300013297 Bacteria 6789
148 Ga0163162_10000113 3300013306 Bacteria 71491
149 Ga0163162_10000167 3300013306 Bacteria 60620
150 Ga0163162_10000503 3300013306 Bacteria 36430
151 Ga0163162_10001777 3300013306 Bacteria 20207
152 Ga0163162_10002570 3300013306 Bacteria 17175
153 Ga0163162_10004113 3300013306 Bacteria 13960
154 Ga0157372_10010530 3300013307 Bacteria 9838
155 Ga0157372_10026800 3300013307 Bacteria 6274
156 Ga0157372_10094758 3300013307 Bacteria 3400
157 Ga0157375_10000230 3300013308 Bacteria 52234
158 Ga0157375_10004131 3300013308 Bacteria 12600
159 Ga0157375_10032679 3300013308 Bacteria 4936
160 Ga0157375_10051435 3300013308 Bacteria 4046
161 Ga0157375_10165067 3300013308 Bacteria 2359
162 Ga0163163_10000141 3300014325 Bacteria 74842
163 Ga0163163_10001938 3300014325 Bacteria 17517
164 Ga0163163_10086602 3300014325 Bacteria 3142
165 Ga0163163_10116939 3300014325 Bacteria 2698
166 Ga0157380_10001611 3300014326 Bacteria 14871
167 Ga0157377_10000850 3300014745 Bacteria 12689
168 Ga0157377_10002868 3300014745 Bacteria 7697
169 Ga0157379_10000446 3300014968 Bacteria 33441
170 Ga0157379_10027632 3300014968 Bacteria 5051
171 Ga0157376_10000191 3300014969 Bacteria 42509
172 Ga0157376_10000733 3300014969 Bacteria 21299
173 Ga0157376_10001775 3300014969 Bacteria 14350
174 Ga0157376_10012269 3300014969 Bacteria 6354
175 Ga0157376_10052674 3300014969 Bacteria 3385
176 Ga0157376_10052846 3300014969 Bacteria 3380
177 Ga0157376_10060183 3300014969 Bacteria 3188
178 Ga0163161_10064757 3300017792 Bacteria 2667
179 Ga0209436_103741 3300025208 Bacteria 3939
180 Ga0209646_1001795 3300025246 Bacteria 5352
181 Ga0209130_1005139 3300025284 Bacteria 4649
182 Ga0207426_1000051 3300025302 Bacteria 391700
183 Ga0209257_1000001 3300025304 Bacteria 2274655
184 Ga0207656_10011342 3300025321 Bacteria 3366
185 Ga0207680_10000236 3300025903 Bacteria 26619
186 Ga0207680_10000332 3300025903 Bacteria 22599
187 Ga0207647_10020425 3300025904 Bacteria 4442
188 Ga0207647_10043467 3300025904 Bacteria 2812
189 Ga0207645_10000839 3300025907 Bacteria 25633
190 Ga0207645_10009063 3300025907 Bacteria 6906
191 Ga0207643_10002066 3300025908 Bacteria 11072
192 Ga0207643_10012891 3300025908 Bacteria 4520
193 Ga0207643_10034389 3300025908 Bacteria 2840
194 Ga0207654_10001181 3300025911 Bacteria 14000
195 Ga0207654_10006590 3300025911 Bacteria 5837
196 Ga0207707_10000297 3300025912 Bacteria 52580
197 Ga0207695_10000060 3300025913 Bacteria 360217
198 Ga0207695_10000185 3300025913 Bacteria 180225
199 Ga0207695_10000272 3300025913 Bacteria 129871
200 Ga0207695_10002590 3300025913 Bacteria 26519
201 Ga0207695_10004168 3300025913 Bacteria 19856
202 Ga0207695_10006372 3300025913 Bacteria 15352
203 Ga0207671_10001990 3300025914 Bacteria 22531
204 Ga0207671_10010305 3300025914 Bacteria 7725
205 Ga0207671_10010319 3300025914 Bacteria 7719
206 Ga0207671_10013970 3300025914 Bacteria 6371
207 Ga0207671_10053294 3300025914 Bacteria 2997
208 Ga0207660_10000959 3300025917 Bacteria 19096
209 Ga0207662_10012706 3300025918 Bacteria 4693
210 Ga0207657_10055789 3300025919 Bacteria 3411
211 Ga0207657_10073672 3300025919 Bacteria 2885
212 Ga0207652_10000864 3300025921 Bacteria 28657
213 Ga0207681_10013434 3300025923 Bacteria 5067
214 Ga0207694_10052215 3300025924 Bacteria 3169
215 Ga0207650_10065502 3300025925 Bacteria 2723
216 Ga0207659_10049903 3300025926 Bacteria 2970
217 Ga0207686_10041093 3300025934 Bacteria 2817
218 Ga0207670_10010736 3300025936 Bacteria 5287
219 Ga0207704_10003927 3300025938 Bacteria 6758
220 Ga0207691_10000037 3300025940 Bacteria 108385
221 Ga0207691_10003608 3300025940 Bacteria 15041
222 Ga0207691_10016201 3300025940 Bacteria 7078
223 Ga0207689_10000687 3300025942 Bacteria 32323
224 Ga0207689_10021014 3300025942 Bacteria 5487
225 Ga0207689_10023348 3300025942 Bacteria 5192
226 Ga0207667_10001626 3300025949 Bacteria 28263
227 Ga0207667_10002109 3300025949 Bacteria 24936
228 Ga0207667_10014448 3300025949 Bacteria 9000
229 Ga0207651_10004264 3300025960 Bacteria 7175
230 Ga0207651_10047547 3300025960 Bacteria 2894
231 Ga0207712_10018429 3300025961 Bacteria 4547
232 Ga0207668_10000600 3300025972 Bacteria 22356
233 Ga0207640_10007161 3300025981 Bacteria 6146
234 Ga0207677_10008514 3300026023 Bacteria 5736
235 Ga0207677_10026058 3300026023 Bacteria 3660
236 Ga0207703_10002980 3300026035 Bacteria 14351
237 Ga0207703_10011809 3300026035 Bacteria 6800
238 Ga0207639_10004142 3300026041 Bacteria 9761
239 Ga0207639_10005158 3300026041 Bacteria 8808
240 Ga0207641_10000194 3300026088 Bacteria 82153
241 Ga0207641_10001393 3300026088 Bacteria 23812
242 Ga0207648_10002869 3300026089 Bacteria 18243
243 Ga0207648_10003586 3300026089 Bacteria 16233
244 Ga0207648_10119095 3300026089 Bacteria 2320
245 Ga0207676_10007278 3300026095 Bacteria 7843
246 Ga0207676_10078560 3300026095 Bacteria 2673
247 Ga0207674_10008533 3300026116 Bacteria 11822
248 Ga0207674_10009394 3300026116 Bacteria 11180
249 Ga0207674_10030032 3300026116 Bacteria 5718
250 Ga0207674_10047920 3300026116 Bacteria 4378
251 Ga0207674_10069095 3300026116 Bacteria 3553
252 Ga0207674_10090361 3300026116 Bacteria 3054
253 Ga0207675_100003634 3300026118 Bacteria 15043
254 Ga0207675_100005878 3300026118 Bacteria 11708
255 Ga0207675_100021748 3300026118 Bacteria 5970
256 Ga0207683_10004574 3300026121 Bacteria 11917
257 Ga0207698_10009008 3300026142 Bacteria 6337
258 Ga0207428_10030264 3300027907 Bacteria 4477
259 Ga0268266_10000088 3300028379 Bacteria 199029
260 Ga0268266_10007281 3300028379 Bacteria 10005
261 Ga0268266_10011132 3300028379 Bacteria 7832
262 Ga0268265_10044432 3300028380 Bacteria 3308
263 Ga0268264_10000201 3300028381 Bacteria 122060
264 Ga0268264_10014788 3300028381 Bacteria 6410
265 Ga0268264_10068706 3300028381 Bacteria 2995
266 Ga0268264_10081757 3300028381 Bacteria 2762
267 Ga0307517_10000658 3300028786 Bacteria 59357
268 Ga0307515_10000074 3300028794 Bacteria 229874
269 Ga0307511_10000224 3300030521 Bacteria 57406
270 Ga0307509_10013609 3300031507 Bacteria 9619
271 Ga0307508_10004548 3300031616 Bacteria 13511
272 Ga0307516_10003121 3300031730 Bacteria 21554
273 Ga0307414_10005861 3300032004 Bacteria 6796
274 Ga0395900_0003976 3300037418 Bacteria 15778
275 Ga0395900_0023343 3300037418 Bacteria 6331
276 Ga0439436_0001521 3300041404 Bacteria 6739
277 Ga0439457_002582 3300042014 Bacteria 5123
278 Ga0450898_000736 3300042134 Bacteria 3995
279 Ga0451577_0106598 3300042876 Bacteria 2505
280 Ga0466969_0000033 3300044656 Bacteria 82227
281 Ga0466972_0000091 3300044658 Bacteria 81829
282 Ga0466972_0017981 3300044658 Bacteria 3535
283 Ga0466966_0000170 3300044684 Bacteria 42809
284 Ga0453684_0042953 3300044712 Bacteria 6084
285 Ga0466957_0000527 3300044842 Bacteria 19281
286 Ga0466959_0000089 3300045049 Bacteria 57482
287 Ga0495638_0049648 3300046460 Bacteria 2623
288 Ga0495630_0024123 3300046517 Bacteria 4498
289 Ga0495648_0001889 3300046524 Bacteria 20019
290 Ga0495668_0005575 3300046616 Bacteria 8466
291 Ga0495611_0001291 3300046648 Bacteria 12780
292 Ga0495672_0021439 3300047320 Bacteria 4215
293 Ga0495687_000079 3300047443 Bacteria 147704
294 Ga0495686_0000041 3300047472 Bacteria 297599
295 Ga0496126_0043932 3300048929 Bacteria 4119
296 Ga0501032_0014490 3300049569 Bacteria 5583
297 Ga0501034_0001294 3300049571 Bacteria 33843
298 Ga0501034_0012273 3300049571 Bacteria 8854
299 Ga0501034_0032248 3300049571 Bacteria 5322
300 Ga0501036_0002885 3300049572 Bacteria 13631
301 Ga0501037_0021724 3300049573 Bacteria 4747
302 Ga0501037_0029212 3300049573 Bacteria 4073
303 Ga0501038_0010751 3300049574 Bacteria 8367
304 Ga0501043_0002333 3300049579 Bacteria 16079
305 Ga0501043_0004223 3300049579 Bacteria 11720
306 Ga0501048_0007182 3300049582 Bacteria 8458
307 Ga0501070_0023650 3300049586 Bacteria 5147
308 Ga0501073_0021159 3300049589 Bacteria 4690
309 Ga0501074_0000322 3300049590 Bacteria 27772
310 Ga0501243_000520 3300049675 Bacteria 5118
311 Ga0501259_002846 3300049688 Bacteria 2774
312 Ga0501219_000087 3300049703 Bacteria 15870
313 Ga0501225_0012238 3300049705 Bacteria 2410
314 Ga0501225_0016360 3300049705 Bacteria 2062
315 Ga0501083_0074886 3300049744 Bacteria 2248
316 Ga0501044_0000710 3300049823 Bacteria 40187
317 Ga0501044_0025347 3300049823 Bacteria 6285
318 Ga0501284_00093 3300050005 Bacteria 19510
319 Ga0501284_00108 3300050005 Bacteria 16272
320 nmdc:mga05p37_208649_c1 3300050507 Bacteria 2362
321 nmdc:mga09592_36367_c1 3300050508 Bacteria 4124
322 nmdc:mga0qj67_3479_c1 3300050509 Bacteria 11350
323 nmdc:mga08y16_7855_c1 3300050511 Bacteria 11168
324 Ga0500578_0000029 3300053086 Bacteria 140078
325 Ga0500644_0000279 3300053088 Bacteria 28337
326 Ga0500644_0003358 3300053088 Bacteria 3958
327 Ga0500583_0000002 3300053092 Bacteria 232826
328 Ga0500583_0009795 3300053092 Bacteria 3523
329 Ga0500583_0055748 3300053092 Bacteria 1849
330 Ga0500658_0003077 3300053134 Bacteria 6376
331 Ga0500568_0007683 3300053139 Bacteria 5264
332 Ga0500616_0005279 3300053153 Bacteria 8828
333 Ga0500616_0026664 3300053153 Bacteria 3196
334 Ga0500622_0000488 3300053156 Bacteria 37136
335 Ga0500611_000011 3300053727 Bacteria 141259

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300053092 Ga0500583_0055748 Ga0500583_0055748_37_1824 567
2 3300049582 Ga0501048_0007182 Ga0501048_0007182_572_2470 612
3 3300044656 Ga0466969_0000033 Ga0466969_0000033_66394_68550 650
4 3300044684 Ga0466966_0000170 Ga0466966_0000170_161_2317 650
5 3300045049 Ga0466959_0000089 Ga0466959_0000089_161_2317 650
6 3300032004 Ga0307414_10005861 Ga0307414_100058614 654
7 3300009147 Ga0114129_10102179 Ga0114129_101021793 660
8 3300025208 Ga0209436_103741 Ga0209436_1037413 660
9 3300025284 Ga0209130_1005139 Ga0209130_10051392 660
10 3300025302 Ga0207426_1000051 Ga0207426_1000051207 660
11 3300044712 Ga0453684_0042953 Ga0453684_0042953_3568_5724 660
12 3300014325 Ga0163163_10000141 Ga0163163_1000014117 661
13 3300053092 Ga0500583_0000002 Ga0500583_0000002_176350_178644 662
14 3300005327 Ga0070658_10031307 Ga0070658_100313072 665
15 3300046460 Ga0495638_0049648 Ga0495638_0049648_83_2293 666
16 3300053092 Ga0500583_0009795 Ga0500583_0009795_158_2368 666
17 3300049571 Ga0501034_0032248 Ga0501034_0032248_947_3010 668
18 3300049705 Ga0501225_0016360 Ga0501225_0016360_27_2042 668
19 3300003323 rootH1_10017103 rootH1_1001710315 670
20 3300053088 Ga0500644_0003358 Ga0500644_0003358_975_3152 670
21 3300009101 Ga0105247_10000640 Ga0105247_1000064012 673
22 3300053134 Ga0500658_0003077 Ga0500658_0003077_4243_6360 673
23 3300053153 Ga0500616_0026664 Ga0500616_0026664_157_2265 673
24 3300053088 Ga0500644_0000279 Ga0500644_0000279_19447_21555 674
25 3300003320 rootH2_10001980 rootH2_100019805 675
26 3300005577 Ga0068857_100063382 Ga0068857_1000633822 675
27 3300026116 Ga0207674_10030032 Ga0207674_100300323 675
28 3300037418 Ga0395900_0023343 Ga0395900_0023343_766_2910 675
29 3300006844 Ga0075428_100037024 Ga0075428_1000370243 677
30 3300006880 Ga0075429_100003534 Ga0075429_1000035346 677
31 3300049744 Ga0501083_0074886 Ga0501083_0074886_36_2162 677
32 3300050508 nmdc:mga09592_36367_c1 nmdc:mga09592_36367_c1_1572_3740 677
33 3300042876 Ga0451577_0106598 Ga0451577_0106598_418_2478 679
34 3300044658 Ga0466972_0017981 Ga0466972_0017981_317_2623 681
35 3300025246 Ga0209646_1001795 Ga0209646_10017953 682
36 3300046616 Ga0495668_0005575 Ga0495668_0005575_2805_4970 682
37 3300005366 Ga0070659_100011390 Ga0070659_1000113903 683
38 3300005471 Ga0070698_100039869 Ga0070698_1000398692 683
39 3300003794 Ga0055531_10000020 Ga0055531_1000002068 684
40 3300025304 Ga0209257_1000001 Ga0209257_10000011316 684
41 3300048929 Ga0496126_0043932 Ga0496126_0043932_846_2972 684
42 3300013104 Ga0157370_10060708 Ga0157370_100607083 685
43 3300049569 Ga0501032_0014490 Ga0501032_0014490_3012_5138 685
44 3300049571 Ga0501034_0001294 Ga0501034_0001294_15773_17899 685
45 3300049579 Ga0501043_0004223 Ga0501043_0004223_1285_3411 685
46 3300049589 Ga0501073_0021159 Ga0501073_0021159_1220_3346 685
47 3300049590 Ga0501074_0000322 Ga0501074_0000322_21281_23407 685
48 3300049823 Ga0501044_0025347 Ga0501044_0025347_421_2547 685
49 3300005290 Ga0065712_10085760 Ga0065712_100857601 688
50 3300005340 Ga0070689_100011747 Ga0070689_1000117473 688
51 3300005354 Ga0070675_100028986 Ga0070675_1000289862 688
52 3300005365 Ga0070688_100021819 Ga0070688_1000218191 688
53 3300005577 Ga0068857_100009222 Ga0068857_1000092224 688
54 3300005719 Ga0068861_100009031 Ga0068861_1000090313 688
55 3300005844 Ga0068862_100052933 Ga0068862_1000529333 688
56 3300006881 Ga0068865_100060140 Ga0068865_1000601401 688
57 3300009094 Ga0111539_10005231 Ga0111539_100052313 688
58 3300013308 Ga0157375_10051435 Ga0157375_100514353 688
59 3300014326 Ga0157380_10001611 Ga0157380_1000161112 688
60 3300014745 Ga0157377_10002868 Ga0157377_100028685 688
61 3300025908 Ga0207643_10002066 Ga0207643_100020666 688
62 3300025919 Ga0207657_10055789 Ga0207657_100557892 688
63 3300025923 Ga0207681_10013434 Ga0207681_100134342 688
64 3300025926 Ga0207659_10049903 Ga0207659_100499032 688
65 3300025960 Ga0207651_10047547 Ga0207651_100475472 688
66 3300026116 Ga0207674_10008533 Ga0207674_100085338 688
67 3300026118 Ga0207675_100003634 Ga0207675_1000036345 688
68 3300027907 Ga0207428_10030264 Ga0207428_100302643 688
69 3300028380 Ga0268265_10044432 Ga0268265_100444322 688
70 3300044658 Ga0466972_0000091 Ga0466972_0000091_48127_50301 688
71 3300050511 nmdc:mga08y16_7855_c1 nmdc:mga08y16_7855_c1_8610_10841 688
72 3300053086 Ga0500578_0000029 Ga0500578_0000029_83186_85462 688
73 3300044842 Ga0466957_0000527 Ga0466957_0000527_485_2659 691
74 3300050005 Ga0501284_00093 Ga0501284_00093_13793_15904 692
75 3300009094 Ga0111539_10043668 Ga0111539_100436684 693
76 3300013102 Ga0157371_10002123 Ga0157371_100021233 693
77 3300013102 Ga0157371_10016279 Ga0157371_100162793 694
78 3300049572 Ga0501036_0002885 Ga0501036_0002885_10230_12413 694
79 3300003320 rootH2_10073961 rootH2_100739613 695
80 iso_pu_bacteria 2896085136 2896087877 696
81 3300031616 Ga0307508_10004548 Ga0307508_100045484 698
82 3300053156 Ga0500622_0000488 Ga0500622_0000488_25315_27546 698
83 iso_pu_bacteria 2818991460 2819680750 699
84 iso_pu_bacteria 2884791551 2884795493 699
85 iso_pu_bacteria 2929177148 2929178931 699
86 iso_pu_bacteria 2945977869 2945981336 699
87 iso_pu_bacteria 2946013367 2946019263 699
88 iso_pu_bacteria 2896109856 2896112400 700
89 3300005333 Ga0070677_10011786 Ga0070677_100117862 702
90 3300009553 Ga0105249_10011477 Ga0105249_100114774 702
91 3300013306 Ga0163162_10001777 Ga0163162_1000177715 702
92 3300014325 Ga0163163_10116939 Ga0163163_101169392 702
93 3300017792 Ga0163161_10064757 Ga0163161_100647572 702
94 3300025940 Ga0207691_10003608 Ga0207691_100036083 702
95 iso_pu_bacteria 2883068021 2883072716 702
96 iso_pu_bacteria 2914759650 2914762833 703
97 3300003320 rootH2_10073962 rootH2_100739622 704
98 3300005327 Ga0070658_10000095 Ga0070658_100000959 704
99 3300005328 Ga0070676_10000580 Ga0070676_1000058012 704
100 3300005335 Ga0070666_10000192 Ga0070666_100001928 704
101 3300005337 Ga0070682_100000280 Ga0070682_1000002806 704
102 3300005341 Ga0070691_10000594 Ga0070691_100005942 704
103 3300005347 Ga0070668_100000482 Ga0070668_10000048220 704
104 3300005355 Ga0070671_100006495 Ga0070671_1000064955 704
105 3300005355 Ga0070671_100029060 Ga0070671_1000290603 704
106 3300005364 Ga0070673_100000101 Ga0070673_10000010120 704
107 3300005367 Ga0070667_100000086 Ga0070667_10000008634 704
108 3300005456 Ga0070678_100081153 Ga0070678_1000811532 704
109 3300005458 Ga0070681_10003291 Ga0070681_100032916 704
110 3300005459 Ga0068867_100005671 Ga0068867_1000056714 704
111 3300005530 Ga0070679_100001119 Ga0070679_1000011196 704
112 3300005539 Ga0068853_100004421 Ga0068853_1000044219 704
113 3300005539 Ga0068853_100033252 Ga0068853_1000332521 704
114 3300005543 Ga0070672_100000376 Ga0070672_10000037617 704
115 3300005547 Ga0070693_100002261 Ga0070693_1000022614 704
116 3300005548 Ga0070665_100000031 Ga0070665_100000031247 704
117 3300005548 Ga0070665_100000350 Ga0070665_10000035062 704
118 3300005563 Ga0068855_100009740 Ga0068855_1000097407 704
119 3300005563 Ga0068855_100011501 Ga0068855_1000115016 704
120 3300005563 Ga0068855_100020864 Ga0068855_1000208644 704
121 3300005563 Ga0068855_100039061 Ga0068855_1000390612 704
122 3300005564 Ga0070664_100016897 Ga0070664_1000168973 704
123 3300005578 Ga0068854_100008051 Ga0068854_1000080514 704
124 3300005616 Ga0068852_100000740 Ga0068852_1000007406 704
125 3300005616 Ga0068852_100020234 Ga0068852_1000202342 704
126 3300005618 Ga0068864_100000207 Ga0068864_10000020745 704
127 3300005841 Ga0068863_100001390 Ga0068863_10000139016 704
128 3300005842 Ga0068858_100005064 Ga0068858_1000050644 704
129 3300005843 Ga0068860_100000072 Ga0068860_10000007237 704
130 3300005843 Ga0068860_100000781 Ga0068860_1000007818 704
131 3300005843 Ga0068860_100004574 Ga0068860_1000045742 704
132 3300005843 Ga0068860_100005007 Ga0068860_1000050076 704
133 3300005983 Ga0081540_1009563 Ga0081540_10095634 704
134 3300006237 Ga0097621_100001772 Ga0097621_1000017729 704
135 3300006237 Ga0097621_100014970 Ga0097621_1000149704 704
136 3300006358 Ga0068871_100000563 Ga0068871_1000005634 704
137 3300006358 Ga0068871_100004585 Ga0068871_1000045853 704
138 3300006881 Ga0068865_100003933 Ga0068865_1000039332 704
139 3300009093 Ga0105240_10000319 Ga0105240_1000031971 704
140 3300009093 Ga0105240_10000852 Ga0105240_1000085226 704
141 3300009093 Ga0105240_10001362 Ga0105240_1000136212 704
142 3300009093 Ga0105240_10001529 Ga0105240_1000152911 704
143 3300009093 Ga0105240_10001537 Ga0105240_1000153710 704
144 3300009093 Ga0105240_10010681 Ga0105240_100106816 704
145 3300009093 Ga0105240_10032771 Ga0105240_100327715 704
146 3300009093 Ga0105240_10058198 Ga0105240_100581982 704
147 3300009093 Ga0105240_10075837 Ga0105240_100758372 704
148 3300009094 Ga0111539_10101963 Ga0111539_101019631 704
149 3300009101 Ga0105247_10019106 Ga0105247_100191062 704
150 3300009174 Ga0105241_10000189 Ga0105241_1000018926 704
151 3300009174 Ga0105241_10002592 Ga0105241_100025928 704
152 3300009176 Ga0105242_10012438 Ga0105242_100124384 704
153 3300009177 Ga0105248_10020786 Ga0105248_100207863 704
154 3300009177 Ga0105248_10029875 Ga0105248_100298754 704
155 3300009545 Ga0105237_10002550 Ga0105237_1000255010 704
156 3300009545 Ga0105237_10010941 Ga0105237_100109411 704
157 3300009545 Ga0105237_10015423 Ga0105237_100154235 704
158 3300009545 Ga0105237_10062556 Ga0105237_100625562 704
159 3300009545 Ga0105237_10072793 Ga0105237_100727932 704
160 3300009553 Ga0105249_10012208 Ga0105249_100122085 704
161 3300010375 Ga0105239_10000101 Ga0105239_1000010132 704
162 3300010375 Ga0105239_10000564 Ga0105239_1000056412 704
163 3300010375 Ga0105239_10001192 Ga0105239_1000119217 704
164 3300010375 Ga0105239_10062809 Ga0105239_100628093 704
165 3300011119 Ga0105246_10047760 Ga0105246_100477602 704
166 3300013100 Ga0157373_10010591 Ga0157373_100105917 704
167 3300013102 Ga0157371_10004534 Ga0157371_100045348 704
168 3300013104 Ga0157370_10000175 Ga0157370_1000017531 704
169 3300013104 Ga0157370_10005368 Ga0157370_100053685 704
170 3300013105 Ga0157369_10015802 Ga0157369_100158025 704
171 3300013296 Ga0157374_10000002 Ga0157374_10000002753 704
172 3300013296 Ga0157374_10000084 Ga0157374_1000008462 704
173 3300013297 Ga0157378_10014983 Ga0157378_100149832 704
174 3300013306 Ga0163162_10000113 Ga0163162_100001134 704
175 3300013306 Ga0163162_10000167 Ga0163162_1000016727 704
176 3300013306 Ga0163162_10002570 Ga0163162_100025709 704
177 3300013306 Ga0163162_10004113 Ga0163162_100041139 704
178 3300013307 Ga0157372_10010530 Ga0157372_100105306 704
179 3300013307 Ga0157372_10026800 Ga0157372_100268003 704
180 3300013307 Ga0157372_10094758 Ga0157372_100947581 704
181 3300013308 Ga0157375_10000230 Ga0157375_1000023042 704
182 3300013308 Ga0157375_10004131 Ga0157375_100041314 704
183 3300013308 Ga0157375_10032679 Ga0157375_100326793 704
184 3300013308 Ga0157375_10165067 Ga0157375_101650671 704
185 3300014325 Ga0163163_10001938 Ga0163163_100019383 704
186 3300014968 Ga0157379_10000446 Ga0157379_100004467 704
187 3300014968 Ga0157379_10027632 Ga0157379_100276323 704
188 3300014969 Ga0157376_10000191 Ga0157376_1000019132 704
189 3300014969 Ga0157376_10000733 Ga0157376_1000073316 704
190 3300014969 Ga0157376_10001775 Ga0157376_1000177511 704
191 3300014969 Ga0157376_10052674 Ga0157376_100526741 704
192 3300014969 Ga0157376_10052846 Ga0157376_100528461 704
193 3300014969 Ga0157376_10060183 Ga0157376_100601832 704
194 3300025903 Ga0207680_10000332 Ga0207680_100003326 704
195 3300025904 Ga0207647_10020425 Ga0207647_100204254 704
196 3300025904 Ga0207647_10043467 Ga0207647_100434672 704
197 3300025907 Ga0207645_10009063 Ga0207645_100090634 704
198 3300025911 Ga0207654_10001181 Ga0207654_100011813 704
199 3300025911 Ga0207654_10006590 Ga0207654_100065904 704
200 3300025912 Ga0207707_10000297 Ga0207707_1000029727 704
201 3300025913 Ga0207695_10000060 Ga0207695_10000060281 704
202 3300025913 Ga0207695_10000185 Ga0207695_10000185145 704
203 3300025913 Ga0207695_10000272 Ga0207695_1000027277 704
204 3300025913 Ga0207695_10002590 Ga0207695_1000259011 704
205 3300025913 Ga0207695_10004168 Ga0207695_100041687 704
206 3300025913 Ga0207695_10006372 Ga0207695_100063724 704
207 3300025914 Ga0207671_10001990 Ga0207671_1000199010 704
208 3300025914 Ga0207671_10010305 Ga0207671_100103054 704
209 3300025914 Ga0207671_10010319 Ga0207671_100103194 704
210 3300025914 Ga0207671_10053294 Ga0207671_100532942 704
211 3300025917 Ga0207660_10000959 Ga0207660_100009593 704
212 3300025918 Ga0207662_10012706 Ga0207662_100127063 704
213 3300025919 Ga0207657_10073672 Ga0207657_100736721 704
214 3300025921 Ga0207652_10000864 Ga0207652_1000086415 704
215 3300025924 Ga0207694_10052215 Ga0207694_100522153 704
216 3300025938 Ga0207704_10003927 Ga0207704_100039272 704
217 3300025940 Ga0207691_10000037 Ga0207691_100000374 704
218 3300025949 Ga0207667_10001626 Ga0207667_1000162619 704
219 3300025949 Ga0207667_10002109 Ga0207667_1000210920 704
220 3300025949 Ga0207667_10014448 Ga0207667_100144487 704
221 3300025960 Ga0207651_10004264 Ga0207651_100042644 704
222 3300025972 Ga0207668_10000600 Ga0207668_100006002 704
223 3300025981 Ga0207640_10007161 Ga0207640_100071613 704
224 3300026023 Ga0207677_10008514 Ga0207677_100085141 704
225 3300026035 Ga0207703_10002980 Ga0207703_100029805 704
226 3300026041 Ga0207639_10004142 Ga0207639_100041422 704
227 3300026041 Ga0207639_10005158 Ga0207639_100051584 704
228 3300026089 Ga0207648_10003586 Ga0207648_100035868 704
229 3300026116 Ga0207674_10009394 Ga0207674_100093944 704
230 3300026116 Ga0207674_10090361 Ga0207674_100903612 704
231 3300026142 Ga0207698_10009008 Ga0207698_100090083 704
232 3300028379 Ga0268266_10000088 Ga0268266_10000088140 704
233 3300028379 Ga0268266_10007281 Ga0268266_100072812 704
234 3300028381 Ga0268264_10000201 Ga0268264_1000020137 704
235 3300028381 Ga0268264_10014788 Ga0268264_100147883 704
236 3300028381 Ga0268264_10081757 Ga0268264_100817571 704
237 3300028786 Ga0307517_10000658 Ga0307517_1000065818 704
238 3300030521 Ga0307511_10000224 Ga0307511_1000022431 704
239 3300031730 Ga0307516_10003121 Ga0307516_1000312120 704
240 3300037418 Ga0395900_0003976 Ga0395900_0003976_9993_12158 704
241 3300046517 Ga0495630_0024123 Ga0495630_0024123_186_2312 704
242 3300046524 Ga0495648_0001889 Ga0495648_0001889_14266_16425 704
243 3300046648 Ga0495611_0001291 Ga0495611_0001291_2187_4340 704
244 3300047320 Ga0495672_0021439 Ga0495672_0021439_1631_3781 704
245 3300047443 Ga0495687_000079 Ga0495687_000079_141319_143478 704
246 3300047472 Ga0495686_0000041 Ga0495686_0000041_227370_229526 704
247 3300049586 Ga0501070_0023650 Ga0501070_0023650_85_2211 704
248 3300049703 Ga0501219_000087 Ga0501219_000087_9389_11554 705
249 3300049705 Ga0501225_0012238 Ga0501225_0012238_14_2158 705
250 3300050005 Ga0501284_00108 Ga0501284_00108_5098_7263 705
251 3300005577 Ga0068857_100034114 Ga0068857_1000341143 706
252 3300005614 Ga0068856_100013913 Ga0068856_1000139133 706
253 3300010375 Ga0105239_10046817 Ga0105239_100468172 706
254 3300026116 Ga0207674_10047920 Ga0207674_100479203 706
255 3300053153 Ga0500616_0005279 Ga0500616_0005279_6048_8270 706
256 3300026089 Ga0207648_10119095 Ga0207648_101190951 707
257 3300049571 Ga0501034_0012273 Ga0501034_0012273_1236_3371 707
258 3300049573 Ga0501037_0021724 Ga0501037_0021724_112_2247 707
259 3300049579 Ga0501043_0002333 Ga0501043_0002333_7857_9992 707
260 3300049823 Ga0501044_0000710 Ga0501044_0000710_22817_24952 707
261 3300005331 Ga0070670_100026587 Ga0070670_1000265874 708
262 3300005340 Ga0070689_100021301 Ga0070689_1000213013 708
263 3300005354 Ga0070675_100010293 Ga0070675_1000102933 708
264 3300005365 Ga0070688_100004819 Ga0070688_1000048191 708
265 3300005577 Ga0068857_100086848 Ga0068857_1000868482 708
266 3300005618 Ga0068864_100098711 Ga0068864_1000987111 708
267 3300005840 Ga0068870_10012557 Ga0068870_100125573 708
268 3300005841 Ga0068863_100006286 Ga0068863_1000062868 708
269 3300006844 Ga0075428_100061087 Ga0075428_1000610874 708
270 3300006846 Ga0075430_100007471 Ga0075430_1000074717 708
271 3300006847 Ga0075431_100041362 Ga0075431_1000413622 708
272 3300006880 Ga0075429_100024383 Ga0075429_1000243834 708
273 3300006881 Ga0068865_100039661 Ga0068865_1000396611 708
274 3300009094 Ga0111539_10139349 Ga0111539_101393491 708
275 3300009147 Ga0114129_10055254 Ga0114129_100552543 708
276 3300014745 Ga0157377_10000850 Ga0157377_100008501 708
277 3300025908 Ga0207643_10012891 Ga0207643_100128913 708
278 3300025925 Ga0207650_10065502 Ga0207650_100655022 708
279 3300025934 Ga0207686_10041093 Ga0207686_100410932 708
280 3300025936 Ga0207670_10010736 Ga0207670_100107363 708
281 3300025940 Ga0207691_10016201 Ga0207691_100162013 708
282 3300026088 Ga0207641_10001393 Ga0207641_100013937 708
283 3300026095 Ga0207676_10078560 Ga0207676_100785602 708
284 3300026116 Ga0207674_10069095 Ga0207674_100690951 708
285 3300031507 Ga0307509_10013609 Ga0307509_100136093 708
286 3300050507 nmdc:mga05p37_208649_c1 nmdc:mga05p37_208649_c1_147_2315 708
287 3300050509 nmdc:mga0qj67_3479_c1 nmdc:mga0qj67_3479_c1_6500_8668 708
288 iso_pu_bacteria 2738541278 2738728324 708
289 3300005471 Ga0070698_100007534 Ga0070698_1000075346 709
290 3300005471 Ga0070698_100044157 Ga0070698_1000441572 709
291 3300026118 Ga0207675_100005878 Ga0207675_1000058787 709
292 3300041404 Ga0439436_0001521 Ga0439436_0001521_3579_5798 709
293 3300042014 Ga0439457_002582 Ga0439457_002582_2670_4889 709
294 3300005331 Ga0070670_100049701 Ga0070670_1000497013 710
295 3300005338 Ga0068868_100003595 Ga0068868_1000035953 710
296 3300005834 Ga0068851_10002890 Ga0068851_100028902 710
297 3300013297 Ga0157378_10002717 Ga0157378_100027176 710
298 3300014325 Ga0163163_10086602 Ga0163163_100866022 710
299 3300025321 Ga0207656_10011342 Ga0207656_100113423 710
300 3300026023 Ga0207677_10026058 Ga0207677_100260584 710
301 3300028794 Ga0307515_10000074 Ga0307515_10000074138 710
302 3300005335 Ga0070666_10000494 Ga0070666_1000049423 711
303 3300005617 Ga0068859_100000186 Ga0068859_10000018627 711
304 3300005841 Ga0068863_100013780 Ga0068863_1000137806 711
305 3300005842 Ga0068858_100011450 Ga0068858_1000114505 711
306 3300005843 Ga0068860_100020065 Ga0068860_1000200655 711
307 3300006237 Ga0097621_100001612 Ga0097621_1000016128 711
308 3300006931 Ga0097620_100000186 Ga0097620_10000018635 711
309 3300009545 Ga0105237_10025066 Ga0105237_100250664 711
310 3300009553 Ga0105249_10001561 Ga0105249_100015613 711
311 3300010375 Ga0105239_10129360 Ga0105239_101293603 711
312 3300013296 Ga0157374_10040385 Ga0157374_100403851 711
313 3300013306 Ga0163162_10000503 Ga0163162_1000050312 711
314 3300014969 Ga0157376_10012269 Ga0157376_100122691 711
315 3300025903 Ga0207680_10000236 Ga0207680_1000023623 711
316 3300025914 Ga0207671_10013970 Ga0207671_100139704 711
317 3300025942 Ga0207689_10000687 Ga0207689_1000068723 711
318 3300025942 Ga0207689_10021014 Ga0207689_100210143 711
319 3300025961 Ga0207712_10018429 Ga0207712_100184294 711
320 3300026035 Ga0207703_10011809 Ga0207703_100118094 711
321 3300026088 Ga0207641_10000194 Ga0207641_1000019426 711
322 3300026095 Ga0207676_10007278 Ga0207676_100072783 711
323 3300028381 Ga0268264_10068706 Ga0268264_100687061 711
324 3300042134 Ga0450898_000736 Ga0450898_000736_330_2558 711
325 3300005356 Ga0070674_100020217 Ga0070674_1000202172 712
326 3300005456 Ga0070678_100003002 Ga0070678_1000030025 712
327 3300005543 Ga0070672_100020985 Ga0070672_1000209853 712
328 3300011119 Ga0105246_10014215 Ga0105246_100142151 712
329 3300025907 Ga0207645_10000839 Ga0207645_1000083912 712
330 3300025908 Ga0207643_10034389 Ga0207643_100343892 712
331 3300025942 Ga0207689_10023348 Ga0207689_100233484 712
332 3300026089 Ga0207648_10002869 Ga0207648_1000286910 712
333 3300026121 Ga0207683_10004574 Ga0207683_100045747 712
334 3300028379 Ga0268266_10011132 Ga0268266_100111325 712
335 3300049573 Ga0501037_0029212 Ga0501037_0029212_1444_3657 712
336 3300049574 Ga0501038_0010751 Ga0501038_0010751_5741_7954 712
337 3300049675 Ga0501243_000520 Ga0501243_000520_2289_4466 712
338 3300049688 Ga0501259_002846 Ga0501259_002846_492_2669 712
339 3300005334 Ga0068869_100017897 Ga0068869_1000178972 713
340 3300026118 Ga0207675_100021748 Ga0207675_1000217488 713
341 3300053139 Ga0500568_0007683 Ga0500568_0007683_1145_3298 713
342 3300053727 Ga0500611_000011 Ga0500611_000011_74634_76898 714
343 3300002459 JGI24751J29686_10000851 JGI24751J29686_100008518 715
344 3300005331 Ga0070670_100021103 Ga0070670_1000211034 715
345 3300009553 Ga0105249_10005620 Ga0105249_1000562010 715

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17804

TSP_NTD

Tail specific protease N-terminal domain

104

310

0.93

PF03572

Peptidase_S41

Peptidase family S41

433

614

0.91

PF11818

DUF3340

C-terminal domain of tail specific protease (DUF3340)

618

766

0.88

PF00595

PDZ

PDZ domain

315

398

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6bxg-assembly1.cif.gz_A 1.45 angstrom resolution crystal structure of pdz domain of carboxy-terminal protease from vibrio cholerae in complex with peptide. 0.9485 256 348
6bxg-assembly1.cif.gz_A 1.45 angstrom resolution crystal structure of pdz domain of carboxy-terminal protease from vibrio cholerae in complex with peptide. 0.8927 256 348
4c2d-assembly2.cif.gz_D crystal structure of the protease ctpb in an active state 0.8768 351 549
5wql-assembly2.cif.gz_C structure of a pdz-protease bound to a substrate-binding adaptor 0.8708 25 697
7qcr-assembly1.cif.gz_B mllt4/afadin pdz domain in complex with the c-terminal peptide from protein e of sars-cov-2 0.8657 259 337
ID Description Score Start End Superfamily
af_E7FGG0_178_251_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.9392 260 316 2.30.42.10
af_F4KHG6_292_467_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.8741 355 545 3.90.226.10
af_F4KHG6_292_467_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.8647 355 545 3.90.226.10
af_I1NHY3_318_500_3.90.226.10 Alpha Beta;Alpha-Beta Complex;2-enoyl-CoA Hydratase; Chain A, domain 1;2-enoyl-CoA Hydratase; Chain A, domain 1 0.8445 355 548 3.90.226.10
af_F1RA47_201_304_2.30.42.10 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.8434 259 333 2.30.42.10
ID Description Score Start End GO Terms
AF-A0A5C9BX09-F1-model_v4 Carboxyl-terminal processing protease 0.9678 68 565 GO:0004175
GO:0006508
GO:0007165
GO:0008236
GO:0030288
AF-A0A3C1NPA3-F1-model_v4 Tail-specific protease 0.9671 45 604 GO:0004175
GO:0006508
GO:0007165
GO:0008236
GO:0030288
AF-A0A4Q3SGD6-F1-model_v4 PDZ domain-containing protein 0.9652 235 684 GO:0004175
GO:0006508
GO:0007165
GO:0008236
GO:0030288
AF-A0A5C9BX09-F1-model_v4 Carboxyl-terminal processing protease 0.9603 68 565 GO:0004175
GO:0006508
GO:0007165
GO:0008236
GO:0030288
AF-A0A3C1NPA3-F1-model_v4 Tail-specific protease 0.9553 45 604 GO:0004175
GO:0006508
GO:0007165
GO:0008236
GO:0030288

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pLDDT pTM Quality
89.09 0.85 High
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Predicted Structure (AlphaFold2)

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