F415776

General Info

Members Datasets Scaffolds Average Seq Length
343 208 311 450

Family's Representative Sequence

Representative Sequence 3300053153|Ga0500616_0000043|Ga0500616_0000043_267031_268461
Length 476
Sequence LNKRRASFLEGENEEYKDQTEIMGKKLLTANINIPGIETFDVYRKNGGYASVEKALKTMTPDEVTEEVKKSGLRGRGGAGFPAGMKWSFLDRKSEKPRYLVCNADESEPGTFKDRYLMEKIPHLLIEGMITGSYALGARTSYIYIRGEYMYIVRILEKAIEEAYAAGFLGQNILGTPYSLDLYVHPGAGAYICGEETALLESLEGKRGNPRLKPPFPAVAGLYAAPTVVNNVETIAAVVPIVNGGGDEYAKIGIGKSTGTKLISASGHINKPGIYEIDLGLPVEEFIYSDEYCGGIWRGRKMKAVVAGGSSVPILPADLILKTAKGEQRLMTYESLADGGFVSGTMLGSGGFIVYDETACIVRNLWTFARFYHHESCGQCSPCREGTGWMEKVLHRIEHGHGHMSDIDLLVDVAKKIEGNTICPLGDAAAWPVASAIRHFREEFEYHVKYPEKVSNPKHFELEPFRSEKKLEAVGA

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2738541283 Pedobacter sp. OK701 Isolate Unclassified
5 2738541284 Pedobacter sp. YR016 Isolate Unclassified
6 2738541302 Pedobacter sp. CF074 Isolate Unclassified
7 2738543023 Pedobacter sp. OK628 Isolate Unclassified
8 2739367651 Pedobacter sp. OK291 Isolate Unclassified
9 2739367656 Pedobacter sp. CF523 Isolate Unclassified
10 2739367663 Pedobacter sp. YR510 Isolate Unclassified
11 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
12 2818991437 Pedobacter terrae 518 Isolate Unclassified
13 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
14 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
15 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
16 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
17 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
18 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
19 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
20 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
21 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
22 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
23 2910245624 Adhaeribacter radiodurans KUDC8001 Isolate Rhizosphere
24 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
25 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
26 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
27 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
28 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
29 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
30 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
31 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
32 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
33 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
34 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
35 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
36 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
37 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
38 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
39 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
40 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
41 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
42 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
43 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
44 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
45 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
48 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
49 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
50 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
53 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
54 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
55 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
56 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
57 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
58 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
59 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
60 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
61 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
62 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
63 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
64 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
65 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
66 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
67 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
68 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
69 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
70 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
71 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
72 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
73 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
74 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
75 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
76 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
77 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
78 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
79 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
80 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
81 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
82 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
83 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
90 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
91 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
92 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
93 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
94 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
95 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
96 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
97 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
98 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
99 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
100 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
101 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
103 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
104 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
105 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
106 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
128 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
129 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
130 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
131 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
132 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
133 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
134 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
135 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
136 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
137 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
138 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
139 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
140 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
141 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
142 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
143 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
144 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
145 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
146 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
147 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
148 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
149 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
150 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
151 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
152 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
153 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
154 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
155 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
156 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
157 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
158 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
159 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
160 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
161 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
162 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
163 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
164 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
165 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
166 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
167 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
168 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
169 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
170 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
171 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
172 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
173 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
174 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
175 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
176 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
177 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
178 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
179 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
180 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
181 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
182 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
183 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
184 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
185 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
186 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
187 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
188 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
189 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
190 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
191 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
193 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
194 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
195 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
196 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
197 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
198 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
199 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
200 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
201 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
202 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
203 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
204 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
205 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
206 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
207 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
208 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.92
Metatranscriptomes 1.46
Isolates 9.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.95
Nodule 0
Rhizoplane 0.58
Rhizosphere 76.68
Stem 0
Stem Tuber 0
Unclassified 10.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24736J21556_1003634 3300001904 Bacteria 2667
2 JGI24739J22299_10019994 3300001989 Bacteria 2394
3 JGI24737J22298_10000060 3300001990 Bacteria 32592
4 JGI24735J21928_10000032 3300002067 Bacteria 72360
5 JGI25152J39213_1000064 3300002773 Bacteria 70321
6 JGI25150J39212_1000004 3300002774 Bacteria 417320
7 JGI25151J46595_10000002 3300003187 Bacteria 731381
8 JGI25165J46597_1000742 3300003214 Bacteria 25223
9 JGI25153J46596_10000037 3300003215 Bacteria 182199
10 rootH1_10004943 3300003316 Bacteria 35922
11 rootH1_10004943 3300003323 Bacteria 7849
12 rootH2_10009361 3300003320 Bacteria 18045
13 rootH2_10012611 3300003320 Bacteria 9224
14 rootH2_10056807 3300003320 Bacteria 2223
15 rootH2_10172198 3300003320 Bacteria 2601
16 rootL2_10184165 3300003322 Bacteria 4816
17 rootH1_10010623 3300003323 Bacteria 3304
18 rootH1_10012646 3300003323 Bacteria 62371
19 rootH1_10027403 3300003323 Bacteria 72977
20 rootH1_10037602 3300003323 Bacteria 6763
21 rootH1_10128349 3300003323 Bacteria 6398
22 Ga0055536_1000006 3300003781 Bacteria 347733
23 Ga0055531_10000868 3300003794 Bacteria 24791
24 Ga0058863_10008894 3300004799 Bacteria 11745
25 Ga0058861_11827112 3300004800 Bacteria 5337
26 Ga0058862_10143705 3300004803 Bacteria 8181
27 Ga0065165_1000176 3300005262 Bacteria 113592
28 Ga0065165_1001313 3300005262 Bacteria 27754
29 Ga0065714_10003510 3300005288 Bacteria 9251
30 Ga0065714_10006750 3300005288 Bacteria 4529
31 Ga0065714_10013705 3300005288 Bacteria 2657
32 Ga0065714_10065068 3300005288 Bacteria 13285
33 Ga0065714_10065706 3300005288 Bacteria 8788
34 Ga0065714_10100956 3300005288 Bacteria 1642
35 Ga0065704_10000273 3300005289 Bacteria 42739
36 Ga0065704_10090701 3300005289 Bacteria 2769
37 Ga0070658_10000008 3300005327 Bacteria 319912
38 Ga0070680_100005673 3300005336 Bacteria 9465
39 Ga0070660_100004582 3300005339 Bacteria 9553
40 Ga0070660_100008013 3300005339 Bacteria 7382
41 Ga0070663_100030150 3300005455 Bacteria 3714
42 Ga0070662_100000090 3300005457 Bacteria 49884
43 Ga0070681_10019337 3300005458 Bacteria 6817
44 Ga0070679_100019798 3300005530 Bacteria 6552
45 Ga0068853_100214069 3300005539 Bacteria 1757
46 Ga0070665_100000118 3300005548 Bacteria 149830
47 Ga0068855_100000049 3300005563 Bacteria 145321
48 Ga0068855_100000155 3300005563 Bacteria 86903
49 Ga0068855_100032317 3300005563 Bacteria 6250
50 Ga0068854_100163732 3300005578 Bacteria 1725
51 Ga0068856_100001430 3300005614 Bacteria 25032
52 Ga0068856_100007465 3300005614 Bacteria 10673
53 Ga0068856_100007533 3300005614 Bacteria 10623
54 Ga0068851_10000057 3300005834 Bacteria 66791
55 Ga0068863_100233134 3300005841 Bacteria 1776
56 Ga0068860_100057443 3300005843 Bacteria 3699
57 Ga0081455_10008205 3300005937 Bacteria 10887
58 Ga0075366_10000135 3300006195 Bacteria 30916
59 Ga0075366_10000556 3300006195 Bacteria 17427
60 Ga0068865_100002736 3300006881 Bacteria 10472
61 Ga0105244_10008757 3300009036 Bacteria 6292
62 Ga0105240_10002021 3300009093 Bacteria 33455
63 Ga0105240_10054425 3300009093 Bacteria 5015
64 Ga0105240_10084083 3300009093 Bacteria 3903
65 Ga0111539_10149423 3300009094 Bacteria 2735
66 Ga0105245_10072888 3300009098 Bacteria 3121
67 Ga0105241_10000804 3300009174 Bacteria 23826
68 Ga0105237_10000394 3300009545 Bacteria 62227
69 Ga0105237_10001504 3300009545 Bacteria 30678
70 Ga0105237_10003766 3300009545 Bacteria 17851
71 Ga0105237_10010052 3300009545 Bacteria 10092
72 Ga0105238_10040227 3300009551 Bacteria 4738
73 Ga0099796_10009344 3300010159 Bacteria 2651
74 Ga0105239_10000049 3300010375 Bacteria 177578
75 Ga0105239_10000166 3300010375 Bacteria 94743
76 Ga0105239_10012380 3300010375 Bacteria 9498
77 Ga0105239_10017420 3300010375 Bacteria 7945
78 Ga0105239_10020179 3300010375 Bacteria 7352
79 Ga0105239_10247045 3300010375 Bacteria 2004
80 Ga0157373_10000086 3300013100 Bacteria 80524
81 Ga0157373_10001842 3300013100 Bacteria 16117
82 Ga0157373_10008022 3300013100 Bacteria 7847
83 Ga0157371_10000027 3300013102 Bacteria 269243
84 Ga0157371_10007301 3300013102 Bacteria 8975
85 Ga0157371_10011057 3300013102 Bacteria 6991
86 Ga0157370_10002773 3300013104 Bacteria 20941
87 Ga0157370_10003748 3300013104 Bacteria 17761
88 Ga0157370_10060967 3300013104 Bacteria 3580
89 Ga0157369_10000053 3300013105 Bacteria 162962
90 Ga0157369_10003605 3300013105 Bacteria 18401
91 Ga0157374_10000301 3300013296 Bacteria 45768
92 Ga0157374_10040216 3300013296 Bacteria 4305
93 Ga0163162_10000012 3300013306 Bacteria 292674
94 Ga0163162_10000078 3300013306 Bacteria 89842
95 Ga0163162_10001704 3300013306 Bacteria 20605
96 Ga0163162_10157883 3300013306 Bacteria 2389
97 Ga0157372_10000039 3300013307 Bacteria 165839
98 Ga0157372_10002381 3300013307 Bacteria 20343
99 Ga0157372_10025844 3300013307 Bacteria 6386
100 Ga0157380_10000001 3300014326 Bacteria 254890
101 Ga0157380_10000314 3300014326 Bacteria 29344
102 Ga0182008_10000020 3300014497 Bacteria 228333
103 Ga0182008_10000053 3300014497 Bacteria 102934
104 Ga0182008_10000336 3300014497 Bacteria 36783
105 Ga0182008_10009526 3300014497 Bacteria 5238
106 Ga0182008_10059651 3300014497 Bacteria 1882
107 Ga0182006_1001480 3300015261 Bacteria 14113
108 Ga0182006_1001934 3300015261 Bacteria 11766
109 Ga0182006_1002073 3300015261 Bacteria 11213
110 Ga0182006_1002254 3300015261 Bacteria 10653
111 Ga0182007_10000005 3300015262 Bacteria 442702
112 Ga0182007_10020801 3300015262 Bacteria 2339
113 Ga0182007_10024589 3300015262 Bacteria 2106
114 Ga0183373_1007 3300015682 Bacteria 282776
115 Ga0163161_10022159 3300017792 Bacteria 4471
116 Ga0163161_10069997 3300017792 Bacteria 2565
117 Ga0206351_10407532 3300020077 Bacteria 2565
118 Ga0207427_100122 3300025231 Bacteria 99064
119 Ga0209437_100048 3300025233 Bacteria 405107
120 Ga0209437_100102 3300025233 Bacteria 224216
121 Ga0207425_1000003 3300025245 Bacteria 1145342
122 Ga0209129_1000022 3300025258 Bacteria 440876
123 Ga0209233_1000029 3300025261 Bacteria 641642
124 Ga0209676_1000039 3300025292 Bacteria 443158
125 Ga0209676_1000485 3300025292 Bacteria 64653
126 Ga0209025_1000007 3300025294 Bacteria 1145109
127 Ga0209758_1000012 3300025297 Bacteria 949866
128 Ga0209050_1000033 3300025298 Bacteria 442615
129 Ga0209050_1004236 3300025298 Bacteria 9858
130 Ga0209050_1035231 3300025298 Bacteria 1483
131 Ga0209257_1000006 3300025304 Bacteria 1570111
132 Ga0207656_10000048 3300025321 Bacteria 46689
133 Ga0207655_1022845 3300025728 Bacteria 3119
134 Ga0207647_10000018 3300025904 Bacteria 124816
135 Ga0207705_10000026 3300025909 Bacteria 256051
136 Ga0207654_10001026 3300025911 Bacteria 15268
137 Ga0207654_10017176 3300025911 Bacteria 3780
138 Ga0207707_10013779 3300025912 Bacteria 7051
139 Ga0207695_10000142 3300025913 Bacteria 214715
140 Ga0207695_10014909 3300025913 Bacteria 9174
141 Ga0207695_10015835 3300025913 Bacteria 8858
142 Ga0207695_10082084 3300025913 Bacteria 3260
143 Ga0207671_10000110 3300025914 Bacteria 126480
144 Ga0207671_10001102 3300025914 Bacteria 32573
145 Ga0207671_10001959 3300025914 Bacteria 22712
146 Ga0207671_10019924 3300025914 Bacteria 5117
147 Ga0207671_10022720 3300025914 Bacteria 4739
148 Ga0207657_10023154 3300025919 Bacteria 5790
149 Ga0207652_10003461 3300025921 Bacteria 13016
150 Ga0207652_10045181 3300025921 Bacteria 3754
151 Ga0207687_10040078 3300025927 Bacteria 3209
152 Ga0207706_10005255 3300025933 Bacteria 12077
153 Ga0207704_10000047 3300025938 Bacteria 84386
154 Ga0207679_10085714 3300025945 Bacteria 2421
155 Ga0207667_10000015 3300025949 Bacteria 417534
156 Ga0207667_10012483 3300025949 Bacteria 9783
157 Ga0207667_10026801 3300025949 Bacteria 6289
158 Ga0207667_10064910 3300025949 Bacteria 3809
159 Ga0207667_10098100 3300025949 Bacteria 3024
160 Ga0207667_10286904 3300025949 Bacteria 1682
161 Ga0207678_10047328 3300026067 Bacteria 3719
162 Ga0207702_10002682 3300026078 Bacteria 16707
163 Ga0207702_10019319 3300026078 Bacteria 5638
164 Ga0207702_10069316 3300026078 Bacteria 3032
165 Ga0207702_10084771 3300026078 Bacteria 2760
166 Ga0207676_10136556 3300026095 Bacteria 2093
167 Ga0207698_10010495 3300026142 Bacteria 5959
168 Ga0268266_10000121 3300028379 Bacteria 154995
169 Ga0268264_10039110 3300028381 Bacteria 3919
170 Ga0307517_10000198 3300028786 Bacteria 102181
171 Ga0307515_10000001 3300028794 Bacteria 4259510
172 Ga0307515_10000003 3300028794 Bacteria 891317
173 Ga0307515_10001436 3300028794 Bacteria 53821
174 Ga0307515_10056048 3300028794 Bacteria 5739
175 Ga0307515_10154315 3300028794 Bacteria 2380
176 Ga0265327_10014797 3300031251 Bacteria 5080
177 Ga0265327_10067597 3300031251 Bacteria 1800
178 Ga0307509_10123427 3300031507 Bacteria 2562
179 Ga0307408_100000396 3300031548 Bacteria 39439
180 Ga0307408_100000464 3300031548 Bacteria 35518
181 Ga0307408_100000560 3300031548 Bacteria 32128
182 Ga0307408_100001326 3300031548 Bacteria 18558
183 Ga0307408_100028499 3300031548 Bacteria 3859
184 Ga0265314_10009334 3300031711 Bacteria 8301
185 Ga0307405_10019142 3300031731 Bacteria 3795
186 Ga0307405_10056208 3300031731 Bacteria 2467
187 Ga0307405_10058318 3300031731 Bacteria 2429
188 Ga0307407_10000001 3300031903 Bacteria 570048
189 Ga0307412_10000001 3300031911 Bacteria 822691
190 Ga0307409_100080694 3300031995 Bacteria 2626
191 Ga0307416_100000008 3300032002 Bacteria 401343
192 Ga0307416_100000457 3300032002 Bacteria 20948
193 Ga0307414_10000414 3300032004 Bacteria 23018
194 Ga0307414_10000470 3300032004 Bacteria 21107
195 Ga0307414_10002491 3300032004 Bacteria 9655
196 Ga0307414_10017713 3300032004 Bacteria 4365
197 Ga0307415_100096313 3300032126 Bacteria 2157
198 Ga0307507_10000099 3300033179 Bacteria 139532
199 Ga0307510_10005580 3300033180 Bacteria 14995
200 Ga0373943_0023571 3300035170 Bacteria 2863
201 Ga0373927_0013797 3300035695 Bacteria 5363
202 Ga0373937_0252335 3300036401 Bacteria 1663
203 Ga0395899_0000024 3300037312 Bacteria 357402
204 Ga0395899_0000027 3300037312 Bacteria 337387
205 Ga0395899_0019564 3300037312 Bacteria 5141
206 Ga0395900_0001518 3300037418 Bacteria 27559
207 Ga0395900_0006443 3300037418 Bacteria 12236
208 Ga0395905_0000327 3300037471 Bacteria 68334
209 Ga0395901_0000921 3300038443 Bacteria 32043
210 Ga0395901_0008911 3300038443 Bacteria 10162
211 Ga0439457_009459 3300042014 Bacteria 2268
212 Ga0439457_010721 3300042014 Bacteria 2100
213 Ga0439434_0007986 3300042435 Bacteria 3101
214 Ga0451577_0000435 3300042876 Bacteria 74303
215 Ga0451577_0053529 3300042876 Bacteria 3603
216 Ga0451577_0054835 3300042876 Bacteria 3558
217 Ga0451577_0109438 3300042876 Bacteria 2471
218 Ga0451577_0120114 3300042876 Bacteria 2354
219 Ga0466969_0013019 3300044656 Bacteria 4381
220 Ga0453683_0000032 3300044673 Bacteria 241702
221 Ga0453683_0123681 3300044673 Bacteria 1629
222 Ga0453684_0043918 3300044712 Bacteria 5994
223 Ga0453684_0086754 3300044712 Bacteria 3882
224 Ga0453684_0091420 3300044712 Bacteria 3756
225 Ga0453684_0091421 3300044712 Bacteria 3756
226 Ga0453684_0201051 3300044712 Bacteria 2323
227 Ga0453684_0280631 3300044712 Bacteria 1900
228 Ga0451576_0000002 3300045051 Bacteria 1670975
229 Ga0451576_0049378 3300045051 Bacteria 4415
230 Ga0451576_0050192 3300045051 Bacteria 4376
231 Ga0451576_0126315 3300045051 Bacteria 2665
232 Ga0495627_020755 3300046453 Bacteria 2186
233 Ga0495629_0000011 3300046459 Bacteria 268675
234 Ga0495638_0000026 3300046460 Bacteria 347061
235 Ga0495651_0163613 3300046462 Bacteria 1592
236 Ga0495650_0000231 3300046471 Bacteria 113969
237 Ga0495650_0021584 3300046471 Bacteria 3107
238 Ga0495585_0000037 3300046492 Bacteria 133335
239 Ga0495585_0001133 3300046492 Bacteria 21876
240 Ga0495583_0019511 3300046506 Bacteria 3537
241 Ga0495583_0075335 3300046506 Bacteria 1476
242 Ga0495606_0000060 3300046507 Bacteria 185907
243 Ga0495606_0015512 3300046507 Bacteria 5864
244 Ga0495606_0019314 3300046507 Bacteria 5076
245 Ga0495610_0000129 3300046512 Bacteria 83051
246 Ga0495610_0000751 3300046512 Bacteria 30621
247 Ga0495610_0004381 3300046512 Bacteria 10458
248 Ga0495616_0002278 3300046513 Bacteria 12835
249 Ga0495616_0010131 3300046513 Bacteria 5470
250 Ga0495631_0001037 3300046518 Bacteria 17230
251 Ga0495637_0023168 3300046520 Bacteria 2826
252 Ga0495644_0010092 3300046523 Bacteria 3638
253 Ga0495666_0001280 3300046526 Bacteria 12186
254 Ga0495652_0134095 3300046529 Bacteria 1956
255 Ga0495586_0001350 3300046535 Bacteria 13620
256 Ga0495609_0004430 3300046538 Bacteria 7680
257 Ga0495609_0015197 3300046538 Bacteria 3607
258 Ga0495609_0015664 3300046538 Bacteria 3546
259 Ga0495633_0000015 3300046558 Bacteria 254484
260 Ga0495633_0004451 3300046558 Bacteria 8910
261 Ga0495633_0005395 3300046558 Bacteria 7834
262 Ga0495668_0000041 3300046616 Bacteria 229462
263 Ga0495625_0000191 3300046660 Bacteria 97363
264 Ga0495625_0001074 3300046660 Bacteria 35469
265 Ga0495625_0005576 3300046660 Bacteria 11413
266 Ga0495625_0071270 3300046660 Bacteria 2439
267 Ga0495625_0071948 3300046660 Bacteria 2425
268 Ga0495625_0112808 3300046660 Bacteria 1857
269 Ga0495661_0002833 3300046665 Bacteria 13136
270 Ga0495661_0057828 3300046665 Bacteria 2313
271 Ga0495649_0000061 3300046694 Bacteria 97338
272 Ga0495660_0022764 3300046810 Bacteria 3575
273 Ga0495672_0025765 3300047320 Bacteria 3759
274 Ga0495676_0011411 3300047321 Bacteria 8020
275 Ga0495683_0015934 3300047323 Bacteria 3904
276 Ga0495687_000570 3300047443 Bacteria 43484
277 Ga0495673_0011433 3300047469 Bacteria 4772
278 Ga0495686_0000679 3300047472 Bacteria 46024
279 Ga0495686_0006807 3300047472 Bacteria 8675
280 Ga0496115_0096387 3300048918 Bacteria 2422
281 Ga0496122_0010569 3300048925 Bacteria 9484
282 Ga0496123_0000777 3300048926 Bacteria 51679
283 Ga0495678_017094 3300049459 Bacteria 3296
284 Ga0501315_003371 3300049531 Bacteria 1593
285 Ga0501034_0000002 3300049571 Bacteria 565510
286 Ga0501036_0044228 3300049572 Bacteria 3772
287 Ga0501037_0027353 3300049573 Bacteria 4213
288 Ga0501048_0074241 3300049582 Bacteria 2400
289 Ga0501217_022154 3300049661 Bacteria 1505
290 Ga0501236_000548 3300049670 Bacteria 4220
291 Ga0501238_003536 3300049671 Bacteria 1923
292 Ga0501242_003786 3300049674 Bacteria 1652
293 Ga0501257_000642 3300049686 Bacteria 6950
294 Ga0501241_006710 3300049758 Bacteria 2114
295 Ga0501264_000950 3300049761 Bacteria 3601
296 nmdc:mga0k408_1014_c1 3300050493 Bacteria 15426
297 nmdc:mga0k408_31_c1 3300050493 Bacteria 85612
298 Ga0500651_0000058 3300053093 Bacteria 72493
299 Ga0500608_000440 3300053122 Bacteria 15676
300 Ga0500618_000016 3300053125 Bacteria 164049
301 Ga0500618_032078 3300053125 Bacteria 1230
302 Ga0500604_0002355 3300053151 Bacteria 5173
303 Ga0500616_0000043 3300053153 Bacteria 342930
304 Ga0500616_0002606 3300053153 Bacteria 14749
305 Ga0500616_0025459 3300053153 Bacteria 3282
306 Ga0500616_0061962 3300053153 Bacteria 1934
307 Ga0500622_0000163 3300053156 Bacteria 70679
308 Ga0500622_0000895 3300053156 Bacteria 25374
309 Ga0500622_0003011 3300053156 Bacteria 11645
310 Ga0500622_0010132 3300053156 Bacteria 5187
311 Ga0500634_0055997 3300053161 Bacteria 2108

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049661 Ga0501217_022154 Ga0501217_022154_280_1452 376
2 3300053125 Ga0500618_032078 Ga0500618_032078_43_1215 378
3 3300044673 Ga0453683_0123681 Ga0453683_0123681_379_1599 393
4 3300003323 rootH1_10010623 rootH1_100106233 403
5 3300005937 Ga0081455_10008205 Ga0081455_1000820511 406
6 3300049573 Ga0501037_0027353 Ga0501037_0027353_2501_3844 407
7 3300049572 Ga0501036_0044228 Ga0501036_0044228_2027_3358 408
8 3300049582 Ga0501048_0074241 Ga0501048_0074241_959_2290 408
9 3300046507 Ga0495606_0019314 Ga0495606_0019314_13_1284 410
10 3300035170 Ga0373943_0023571 Ga0373943_0023571_48_1331 412
11 3300036401 Ga0373937_0252335 Ga0373937_0252335_311_1597 412
12 3300046459 Ga0495629_0000011 Ga0495629_0000011_102639_103922 412
13 3300046526 Ga0495666_0001280 Ga0495666_0001280_3865_5148 412
14 3300046535 Ga0495586_0001350 Ga0495586_0001350_667_1950 412
15 3300047321 Ga0495676_0011411 Ga0495676_0011411_4523_5806 412
16 3300010159 Ga0099796_10009344 Ga0099796_100093442 413
17 3300015261 Ga0182006_1002254 Ga0182006_10022546 413
18 3300028794 Ga0307515_10056048 Ga0307515_100560483 414
19 3300005841 Ga0068863_100233134 Ga0068863_1002331342 415
20 3300026095 Ga0207676_10136556 Ga0207676_101365562 415
21 3300031251 Ga0265327_10067597 Ga0265327_100675972 415
22 3300031507 Ga0307509_10123427 Ga0307509_101234272 415
23 3300035695 Ga0373927_0013797 Ga0373927_0013797_1994_3304 415
24 3300010375 Ga0105239_10012380 Ga0105239_100123804 417
25 3300031251 Ga0265327_10014797 Ga0265327_100147973 420
26 3300044673 Ga0453683_0000032 Ga0453683_0000032_1871_3178 422
27 3300044712 Ga0453684_0091420 Ga0453684_0091420_1910_3217 422
28 3300044712 Ga0453684_0091421 Ga0453684_0091421_540_1847 422
29 3300045051 Ga0451576_0049378 Ga0451576_0049378_2137_3444 422
30 3300045051 Ga0451576_0050192 Ga0451576_0050192_1593_2900 422
31 3300042876 Ga0451577_0053529 Ga0451577_0053529_365_1720 426
32 3300042876 Ga0451577_0054835 Ga0451577_0054835_1669_3024 426
33 3300042876 Ga0451577_0109438 Ga0451577_0109438_542_1900 426
34 3300044712 Ga0453684_0201051 Ga0453684_0201051_631_1989 426
35 3300045051 Ga0451576_0126315 Ga0451576_0126315_908_2263 426
36 3300005843 Ga0068860_100057443 Ga0068860_1000574433 427
37 3300028381 Ga0268264_10039110 Ga0268264_100391103 427
38 iso_pu_bacteria 2890804823 2890807088 428
39 3300005834 Ga0068851_10000057 Ga0068851_100000578 429
40 3300025321 Ga0207656_10000048 Ga0207656_1000004841 429
41 3300044712 Ga0453684_0043918 Ga0453684_0043918_3838_5178 429
42 iso_pu_bacteria 2522125168 2522549155 429
43 iso_pu_bacteria 2911138879 2911139683 429
44 iso_pu_bacteria 2910245624 2910246231 430
45 3300009094 Ga0111539_10149423 Ga0111539_101494233 431
46 3300014326 Ga0157380_10000314 Ga0157380_100003149 431
47 3300031711 Ga0265314_10009334 Ga0265314_100093347 431
48 3300031731 Ga0307405_10058318 Ga0307405_100583183 431
49 3300032002 Ga0307416_100000457 Ga0307416_1000004578 431
50 3300053156 Ga0500622_0000895 Ga0500622_0000895_9382_10740 431
51 3300003794 Ga0055531_10000868 Ga0055531_1000086812 432
52 3300025304 Ga0209257_1000006 Ga0209257_1000006715 432
53 3300038443 Ga0395901_0000921 Ga0395901_0000921_26133_27470 432
54 3300053153 Ga0500616_0061962 Ga0500616_0061962_348_1685 432
55 3300005262 Ga0065165_1000176 Ga0065165_100017695 433
56 3300025292 Ga0209676_1000485 Ga0209676_100048559 433
57 3300025298 Ga0209050_1035231 Ga0209050_10352311 433
58 3300031731 Ga0307405_10019142 Ga0307405_100191422 433
59 3300049531 Ga0501315_003371 Ga0501315_003371_158_1498 433
60 3300013104 Ga0157370_10060967 Ga0157370_100609673 434
61 3300031548 Ga0307408_100000396 Ga0307408_10000039624 434
62 3300042876 Ga0451577_0000435 Ga0451577_0000435_62332_63675 434
63 3300042876 Ga0451577_0120114 Ga0451577_0120114_864_2204 434
64 3300003320 rootH2_10012611 rootH2_100126116 435
65 3300046660 Ga0495625_0071270 Ga0495625_0071270_959_2308 435
66 3300049671 Ga0501238_003536 Ga0501238_003536_106_1458 435
67 3300049761 Ga0501264_000950 Ga0501264_000950_963_2315 435
68 iso_pu_bacteria 2585427687 2586206984 435
69 iso_pu_bacteria 2599185184 2599481422 435
70 iso_pu_bacteria 2738541302 2738854592 435
71 iso_pu_bacteria 2739367651 2739587103 435
72 iso_pu_bacteria 2739367656 2739615201 435
73 iso_pu_bacteria 2739367663 2739645673 435
74 iso_pu_bacteria 2818991437 2819547568 435
75 iso_pu_bacteria 2842722452 2842726581 435
76 iso_pu_bacteria 2842909656 2842911425 435
77 iso_pu_bacteria 2849281842 2849284229 435
78 iso_pu_bacteria 2904445276 2904449004 435
79 iso_pu_bacteria 2928078545 2928083283 435
80 iso_pu_bacteria 2928147474 2928152745 435
81 iso_pu_bacteria 2932082852 2932088293 435
82 iso_pu_bacteria 2945997725 2946003118 435
83 iso_pu_bacteria 2954016120 2954019977 435
84 3300003323 rootH1_10027403 rootH1_1002740321 436
85 3300014326 Ga0157380_10000001 Ga0157380_1000000157 436
86 3300031548 Ga0307408_100028499 Ga0307408_1000284993 436
87 3300044712 Ga0453684_0086754 Ga0453684_0086754_21_1385 436
88 3300045051 Ga0451576_0000002 Ga0451576_0000002_74970_76316 436
89 3300049670 Ga0501236_000548 Ga0501236_000548_2796_4148 436
90 iso_pu_bacteria 2738543023 2739304129 436
91 iso_pu_bacteria 2852627209 2852630699 436
92 iso_pu_bacteria 2919186247 2919190656 436
93 iso_pu_bacteria 2939664404 2939669134 436
94 iso_pu_bacteria 2977232053 2977234015 436
95 3300003316 rootH1_10004943 rootH1_100049435 437
96 3300003320 rootH2_10056807 rootH2_100568072 437
97 3300003320 rootH2_10172198 rootH2_101721982 437
98 3300003322 rootL2_10184165 rootL2_101841655 437
99 3300003323 rootH1_10128349 rootH1_101283491 437
100 3300005262 Ga0065165_1001313 Ga0065165_100131312 437
101 3300005614 Ga0068856_100007465 Ga0068856_1000074653 437
102 3300025298 Ga0209050_1004236 Ga0209050_10042362 437
103 3300025945 Ga0207679_10085714 Ga0207679_100857143 437
104 3300026078 Ga0207702_10084771 Ga0207702_100847713 437
105 3300028794 Ga0307515_10000003 Ga0307515_10000003709 437
106 3300046460 Ga0495638_0000026 Ga0495638_0000026_156741_158105 437
107 3300047472 Ga0495686_0006807 Ga0495686_0006807_4211_5614 437
108 3300049674 Ga0501242_003786 Ga0501242_003786_136_1488 437
109 3300049686 Ga0501257_000642 Ga0501257_000642_4421_5773 437
110 3300053151 Ga0500604_0002355 Ga0500604_0002355_936_2294 437
111 3300053153 Ga0500616_0000043 Ga0500616_0000043_267031_268461 437
112 3300053153 Ga0500616_0025459 Ga0500616_0025459_90_1448 437
113 3300053156 Ga0500622_0000163 Ga0500622_0000163_14820_16178 437
114 3300053156 Ga0500622_0003011 Ga0500622_0003011_3796_5154 437
115 iso_pu_bacteria 2738541283 2738756037 437
116 iso_pu_bacteria 2738541284 2738763339 437
117 iso_pu_bacteria 2775506987 2776616056 437
118 iso_pu_bacteria 2852623160 2852627066 437
119 iso_pu_bacteria 2857627736 2857627834 437
120 iso_pu_bacteria 2884933994 2884935200 437
121 iso_pu_bacteria 2902048731 2902050047 437
122 iso_pu_bacteria 2919437846 2919443057 437
123 3300044712 Ga0453684_0280631 Ga0453684_0280631_400_1758 438
124 3300046506 Ga0495583_0075335 Ga0495583_0075335_89_1444 438
125 3300046665 Ga0495661_0002833 Ga0495661_0002833_2983_4338 438
126 3300046665 Ga0495661_0057828 Ga0495661_0057828_61_1416 438
127 3300001989 JGI24739J22299_10019994 JGI24739J22299_100199942 439
128 3300001990 JGI24737J22298_10000060 JGI24737J22298_1000006016 439
129 3300002067 JGI24735J21928_10000032 JGI24735J21928_1000003236 439
130 3300002773 JGI25152J39213_1000064 JGI25152J39213_100006439 439
131 3300002774 JGI25150J39212_1000004 JGI25150J39212_1000004120 439
132 3300003187 JGI25151J46595_10000002 JGI25151J46595_10000002505 439
133 3300003215 JGI25153J46596_10000037 JGI25153J46596_10000037123 439
134 3300003320 rootH2_10009361 rootH2_100093617 439
135 3300003781 Ga0055536_1000006 Ga0055536_100000676 439
136 3300004799 Ga0058863_10008894 Ga0058863_100088946 439
137 3300004800 Ga0058861_11827112 Ga0058861_118271126 439
138 3300004803 Ga0058862_10143705 Ga0058862_101437057 439
139 3300005288 Ga0065714_10065068 Ga0065714_100650689 439
140 3300005288 Ga0065714_10065706 Ga0065714_100657063 439
141 3300005288 Ga0065714_10100956 Ga0065714_101009561 439
142 3300005336 Ga0070680_100005673 Ga0070680_1000056734 439
143 3300005458 Ga0070681_10019337 Ga0070681_100193377 439
144 3300005563 Ga0068855_100032317 Ga0068855_1000323177 439
145 3300006195 Ga0075366_10000556 Ga0075366_100005564 439
146 3300009036 Ga0105244_10008757 Ga0105244_100087574 439
147 3300009093 Ga0105240_10002021 Ga0105240_100020215 439
148 3300009093 Ga0105240_10084083 Ga0105240_100840833 439
149 3300009545 Ga0105237_10003766 Ga0105237_1000376618 439
150 3300010375 Ga0105239_10020179 Ga0105239_100201797 439
151 3300013102 Ga0157371_10000027 Ga0157371_100000279 439
152 3300013104 Ga0157370_10003748 Ga0157370_1000374813 439
153 3300013105 Ga0157369_10000053 Ga0157369_10000053150 439
154 3300013306 Ga0163162_10000078 Ga0163162_1000007843 439
155 3300013306 Ga0163162_10001704 Ga0163162_1000170412 439
156 3300013307 Ga0157372_10002381 Ga0157372_1000238117 439
157 3300014497 Ga0182008_10000336 Ga0182008_100003364 439
158 3300015261 Ga0182006_1001934 Ga0182006_10019345 439
159 3300015261 Ga0182006_1002073 Ga0182006_10020733 439
160 3300015262 Ga0182007_10000005 Ga0182007_10000005265 439
161 3300015682 Ga0183373_1007 Ga0183373_1007212 439
162 3300017792 Ga0163161_10022159 Ga0163161_100221593 439
163 3300020077 Ga0206351_10407532 Ga0206351_104075321 439
164 3300025245 Ga0207425_1000003 Ga0207425_1000003341 439
165 3300025258 Ga0209129_1000022 Ga0209129_1000022341 439
166 3300025292 Ga0209676_1000039 Ga0209676_1000039171 439
167 3300025294 Ga0209025_1000007 Ga0209025_1000007340 439
168 3300025297 Ga0209758_1000012 Ga0209758_1000012341 439
169 3300025298 Ga0209050_1000033 Ga0209050_1000033278 439
170 3300025728 Ga0207655_1022845 Ga0207655_10228453 439
171 3300025911 Ga0207654_10017176 Ga0207654_100171764 439
172 3300025912 Ga0207707_10013779 Ga0207707_100137794 439
173 3300025913 Ga0207695_10000142 Ga0207695_1000014286 439
174 3300025913 Ga0207695_10082084 Ga0207695_100820841 439
175 3300025914 Ga0207671_10000110 Ga0207671_1000011066 439
176 3300025914 Ga0207671_10022720 Ga0207671_100227205 439
177 3300025921 Ga0207652_10003461 Ga0207652_100034616 439
178 3300025949 Ga0207667_10098100 Ga0207667_100981001 439
179 3300028794 Ga0307515_10000001 Ga0307515_100000011386 439
180 3300031903 Ga0307407_10000001 Ga0307407_10000001202 439
181 3300031995 Ga0307409_100080694 Ga0307409_1000806943 439
182 3300032002 Ga0307416_100000008 Ga0307416_100000008187 439
183 3300032004 Ga0307414_10002491 Ga0307414_100024915 439
184 3300033179 Ga0307507_10000099 Ga0307507_1000009972 439
185 3300037312 Ga0395899_0000027 Ga0395899_0000027_119458_120816 439
186 3300042435 Ga0439434_0007986 Ga0439434_0007986_1419_2777 439
187 3300046453 Ga0495627_020755 Ga0495627_020755_334_1701 439
188 3300046471 Ga0495650_0000231 Ga0495650_0000231_38973_40331 439
189 3300046492 Ga0495585_0000037 Ga0495585_0000037_43445_44803 439
190 3300046506 Ga0495583_0019511 Ga0495583_0019511_641_1999 439
191 3300046507 Ga0495606_0000060 Ga0495606_0000060_53433_54791 439
192 3300046512 Ga0495610_0000129 Ga0495610_0000129_75095_76462 439
193 3300046512 Ga0495610_0000751 Ga0495610_0000751_28799_30157 439
194 3300046512 Ga0495610_0004381 Ga0495610_0004381_433_1800 439
195 3300046513 Ga0495616_0002278 Ga0495616_0002278_1812_3170 439
196 3300046513 Ga0495616_0010131 Ga0495616_0010131_2977_4335 439
197 3300046520 Ga0495637_0023168 Ga0495637_0023168_54_1412 439
198 3300046538 Ga0495609_0015197 Ga0495609_0015197_1762_3120 439
199 3300046558 Ga0495633_0004451 Ga0495633_0004451_379_1737 439
200 3300046558 Ga0495633_0005395 Ga0495633_0005395_2119_3486 439
201 3300046660 Ga0495625_0000191 Ga0495625_0000191_54192_55550 439
202 3300046660 Ga0495625_0071948 Ga0495625_0071948_932_2290 439
203 3300046694 Ga0495649_0000061 Ga0495649_0000061_41814_43172 439
204 3300046810 Ga0495660_0022764 Ga0495660_0022764_309_1664 439
205 3300047320 Ga0495672_0025765 Ga0495672_0025765_1196_2551 439
206 3300047469 Ga0495673_0011433 Ga0495673_0011433_1337_2695 439
207 3300049459 Ga0495678_017094 Ga0495678_017094_818_2176 439
208 3300049571 Ga0501034_0000002 Ga0501034_0000002_308456_309811 439
209 3300050493 nmdc:mga0k408_1014_c1 nmdc:mga0k408_1014_c1_606_1964 439
210 3300053125 Ga0500618_000016 Ga0500618_000016_12999_14357 439
211 3300053153 Ga0500616_0002606 Ga0500616_0002606_1266_2633 439
212 3300005288 Ga0065714_10006750 Ga0065714_100067501 440
213 3300005530 Ga0070679_100019798 Ga0070679_1000197989 440
214 3300005563 Ga0068855_100000049 Ga0068855_100000049134 440
215 3300005563 Ga0068855_100000155 Ga0068855_10000015577 440
216 3300005614 Ga0068856_100001430 Ga0068856_1000014303 440
217 3300006195 Ga0075366_10000135 Ga0075366_1000013517 440
218 3300013100 Ga0157373_10001842 Ga0157373_100018425 440
219 3300013306 Ga0163162_10157883 Ga0163162_101578833 440
220 3300013307 Ga0157372_10025844 Ga0157372_100258443 440
221 3300025921 Ga0207652_10045181 Ga0207652_100451812 440
222 3300025949 Ga0207667_10000015 Ga0207667_10000015384 440
223 3300025949 Ga0207667_10012483 Ga0207667_100124838 440
224 3300026078 Ga0207702_10002682 Ga0207702_100026823 440
225 3300028794 Ga0307515_10001436 Ga0307515_100014361 440
226 3300031731 Ga0307405_10056208 Ga0307405_100562083 440
227 3300032004 Ga0307414_10000470 Ga0307414_1000047016 440
228 3300046471 Ga0495650_0021584 Ga0495650_0021584_1302_2663 440
229 3300046492 Ga0495585_0001133 Ga0495585_0001133_3568_4929 440
230 3300046507 Ga0495606_0015512 Ga0495606_0015512_2270_3631 440
231 3300046538 Ga0495609_0004430 Ga0495609_0004430_174_1535 440
232 3300046558 Ga0495633_0000015 Ga0495633_0000015_116078_117439 440
233 3300046616 Ga0495668_0000041 Ga0495668_0000041_59156_60517 440
234 3300046660 Ga0495625_0001074 Ga0495625_0001074_9016_10377 440
235 3300046660 Ga0495625_0005576 Ga0495625_0005576_1333_2694 440
236 3300047472 Ga0495686_0000679 Ga0495686_0000679_38713_40074 440
237 3300050493 nmdc:mga0k408_31_c1 nmdc:mga0k408_31_c1_51253_52614 440
238 3300053161 Ga0500634_0055997 Ga0500634_0055997_447_1808 440
239 3300001904 JGI24736J21556_1003634 JGI24736J21556_10036344 441
240 3300003214 JGI25165J46597_1000742 JGI25165J46597_10007421 441
241 3300003323 rootH1_10012646 rootH1_1001264658 441
242 3300003323 rootH1_10037602 rootH1_100376027 441
243 3300005288 Ga0065714_10003510 Ga0065714_100035107 441
244 3300005288 Ga0065714_10013705 Ga0065714_100137052 441
245 3300005289 Ga0065704_10000273 Ga0065704_1000027331 441
246 3300005289 Ga0065704_10090701 Ga0065704_100907012 441
247 3300005327 Ga0070658_10000008 Ga0070658_10000008196 441
248 3300005339 Ga0070660_100004582 Ga0070660_1000045823 441
249 3300005339 Ga0070660_100008013 Ga0070660_1000080136 441
250 3300005455 Ga0070663_100030150 Ga0070663_1000301504 441
251 3300005457 Ga0070662_100000090 Ga0070662_10000009038 441
252 3300005539 Ga0068853_100214069 Ga0068853_1002140692 441
253 3300005548 Ga0070665_100000118 Ga0070665_100000118110 441
254 3300005578 Ga0068854_100163732 Ga0068854_1001637321 441
255 3300005614 Ga0068856_100007533 Ga0068856_1000075339 441
256 3300006881 Ga0068865_100002736 Ga0068865_1000027369 441
257 3300009093 Ga0105240_10054425 Ga0105240_100544257 441
258 3300009098 Ga0105245_10072888 Ga0105245_100728882 441
259 3300009174 Ga0105241_10000804 Ga0105241_1000080416 441
260 3300009545 Ga0105237_10000394 Ga0105237_100003943 441
261 3300009545 Ga0105237_10001504 Ga0105237_100015049 441
262 3300009545 Ga0105237_10010052 Ga0105237_1001005210 441
263 3300009551 Ga0105238_10040227 Ga0105238_100402271 441
264 3300010375 Ga0105239_10000049 Ga0105239_10000049150 441
265 3300010375 Ga0105239_10000166 Ga0105239_1000016638 441
266 3300010375 Ga0105239_10017420 Ga0105239_100174208 441
267 3300010375 Ga0105239_10247045 Ga0105239_102470451 441
268 3300013100 Ga0157373_10000086 Ga0157373_1000008630 441
269 3300013100 Ga0157373_10008022 Ga0157373_100080228 441
270 3300013102 Ga0157371_10007301 Ga0157371_100073017 441
271 3300013102 Ga0157371_10011057 Ga0157371_100110573 441
272 3300013104 Ga0157370_10002773 Ga0157370_1000277316 441
273 3300013105 Ga0157369_10003605 Ga0157369_100036056 441
274 3300013296 Ga0157374_10000301 Ga0157374_1000030124 441
275 3300013296 Ga0157374_10040216 Ga0157374_100402162 441
276 3300013306 Ga0163162_10000012 Ga0163162_10000012120 441
277 3300013307 Ga0157372_10000039 Ga0157372_1000003932 441
278 3300014497 Ga0182008_10000020 Ga0182008_10000020104 441
279 3300014497 Ga0182008_10000053 Ga0182008_1000005345 441
280 3300014497 Ga0182008_10009526 Ga0182008_100095263 441
281 3300014497 Ga0182008_10059651 Ga0182008_100596512 441
282 3300015261 Ga0182006_1001480 Ga0182006_10014807 441
283 3300015262 Ga0182007_10020801 Ga0182007_100208011 441
284 3300015262 Ga0182007_10024589 Ga0182007_100245892 441
285 3300017792 Ga0163161_10069997 Ga0163161_100699972 441
286 3300025231 Ga0207427_100122 Ga0207427_10012240 441
287 3300025233 Ga0209437_100048 Ga0209437_100048256 441
288 3300025233 Ga0209437_100102 Ga0209437_100102149 441
289 3300025261 Ga0209233_1000029 Ga0209233_1000029120 441
290 3300025904 Ga0207647_10000018 Ga0207647_1000001894 441
291 3300025909 Ga0207705_10000026 Ga0207705_10000026197 441
292 3300025911 Ga0207654_10001026 Ga0207654_1000102612 441
293 3300025913 Ga0207695_10014909 Ga0207695_100149097 441
294 3300025913 Ga0207695_10015835 Ga0207695_1001583510 441
295 3300025914 Ga0207671_10001102 Ga0207671_1000110213 441
296 3300025914 Ga0207671_10001959 Ga0207671_1000195922 441
297 3300025914 Ga0207671_10019924 Ga0207671_100199242 441
298 3300025919 Ga0207657_10023154 Ga0207657_100231546 441
299 3300025927 Ga0207687_10040078 Ga0207687_100400785 441
300 3300025933 Ga0207706_10005255 Ga0207706_100052559 441
301 3300025938 Ga0207704_10000047 Ga0207704_1000004742 441
302 3300025949 Ga0207667_10026801 Ga0207667_100268015 441
303 3300025949 Ga0207667_10064910 Ga0207667_100649106 441
304 3300025949 Ga0207667_10286904 Ga0207667_102869042 441
305 3300026067 Ga0207678_10047328 Ga0207678_100473282 441
306 3300026078 Ga0207702_10019319 Ga0207702_100193192 441
307 3300026078 Ga0207702_10069316 Ga0207702_100693163 441
308 3300026142 Ga0207698_10010495 Ga0207698_100104955 441
309 3300028379 Ga0268266_10000121 Ga0268266_1000012146 441
310 3300028786 Ga0307517_10000198 Ga0307517_1000019844 441
311 3300028794 Ga0307515_10154315 Ga0307515_101543152 441
312 3300031548 Ga0307408_100000464 Ga0307408_10000046415 441
313 3300031548 Ga0307408_100000560 Ga0307408_1000005607 441
314 3300031548 Ga0307408_100001326 Ga0307408_10000132611 441
315 3300031911 Ga0307412_10000001 Ga0307412_10000001296 441
316 3300032004 Ga0307414_10000414 Ga0307414_1000041424 441
317 3300032004 Ga0307414_10017713 Ga0307414_100177135 441
318 3300032126 Ga0307415_100096313 Ga0307415_1000963133 441
319 3300033180 Ga0307510_10005580 Ga0307510_100055803 441
320 3300037312 Ga0395899_0000024 Ga0395899_0000024_322388_323752 441
321 3300037312 Ga0395899_0019564 Ga0395899_0019564_534_1901 441
322 3300037418 Ga0395900_0001518 Ga0395900_0001518_17550_18914 441
323 3300037418 Ga0395900_0006443 Ga0395900_0006443_10854_12221 441
324 3300037471 Ga0395905_0000327 Ga0395905_0000327_22257_23624 441
325 3300038443 Ga0395901_0008911 Ga0395901_0008911_2313_3680 441
326 3300042014 Ga0439457_009459 Ga0439457_009459_472_1839 441
327 3300042014 Ga0439457_010721 Ga0439457_010721_488_1858 441
328 3300044656 Ga0466969_0013019 Ga0466969_0013019_20_1384 441
329 3300046462 Ga0495651_0163613 Ga0495651_0163613_174_1538 441
330 3300046518 Ga0495631_0001037 Ga0495631_0001037_7491_8852 441
331 3300046523 Ga0495644_0010092 Ga0495644_0010092_2167_3531 441
332 3300046529 Ga0495652_0134095 Ga0495652_0134095_114_1478 441
333 3300046538 Ga0495609_0015664 Ga0495609_0015664_475_1842 441
334 3300046660 Ga0495625_0112808 Ga0495625_0112808_126_1490 441
335 3300047323 Ga0495683_0015934 Ga0495683_0015934_2414_3775 441
336 3300047443 Ga0495687_000570 Ga0495687_000570_26990_28351 441
337 3300048918 Ga0496115_0096387 Ga0496115_0096387_286_1662 441
338 3300048925 Ga0496122_0010569 Ga0496122_0010569_3132_4496 441
339 3300048926 Ga0496123_0000777 Ga0496123_0000777_5200_6564 441
340 3300049758 Ga0501241_006710 Ga0501241_006710_196_1563 441
341 3300053093 Ga0500651_0000058 Ga0500651_0000058_35017_36384 441
342 3300053122 Ga0500608_000440 Ga0500608_000440_9544_10905 441
343 3300053156 Ga0500622_0010132 Ga0500622_0010132_106_1470 441

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01512

Complex1_51K

Respiratory-chain NADH dehydrogenase 51 Kd subunit

68

240

0.97

PF10589

NADH_4Fe-4S

NADH-ubiquinone oxidoreductase-F iron-sulfur binding region

363

447

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
7p61-assembly1.cif.gz_F complex i from e. coli, ddm-purified, with nadh, resting state 0.906 17 413
6vw7-assembly1.cif.gz_B formate dehydrogenase fdsabg subcomplex fdsbg from c. necator - nadh bound 0.903 2 410
8oh5-assembly1.cif.gz_B cryo-em structure of the electron bifurcating transhydrogenase stnabc complex from sporomusa ovata (state 2) 0.9007 2 413
6g2j-assembly1.cif.gz_F mouse mitochondrial complex i in the active state 0.8992 4 418
7p8n-assembly1.cif.gz_b tmhydabc- t. maritima hydrogenase with bridge closed 0.8984 2 414
ID Description Score Start End Superfamily
2fugA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NADH-ubiquinone oxidoreductase 51kDa subunit 0.8809 50 227 3.40.50.11540
2fugA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NADH-ubiquinone oxidoreductase 51kDa subunit 0.8717 50 227 3.40.50.11540
af_P9WIV7_336_431_1.20.1440.230 Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.8525 325 414 1.20.1440.230
af_O94500_78_261_3.40.50.11540 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NADH-ubiquinone oxidoreductase 51kDa subunit 0.8412 50 226 3.40.50.11540
af_A1ZAW7_585_680_1.20.1440.230 Mainly Alpha;Up-down Bundle;de novo design (two linked rop proteins);NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.836 326 418 1.20.1440.230
ID Description Score Start End GO Terms
AF-A0A7X9KPD5-F1-model_v4 NADH-quinone oxidoreductase subunit F (EC 1.6.5.11) 0.9853 1 161 GO:0016491
GO:0046872
GO:0051539
AF-A0A7X9KPD5-F1-model_v4 NADH-quinone oxidoreductase subunit F (EC 1.6.5.11) 0.9792 1 161 GO:0016491
GO:0046872
GO:0051539
AF-A0A6B3C9I9-F1-model_v4 NADH-quinone oxidoreductase subunit F (EC 1.6.5.11) 0.9665 9 142 GO:0016491
GO:0046872
GO:0048038
GO:0051539
AF-A0A3N9NRM1-F1-model_v4 NADH-quinone oxidoreductase subunit F (EC 1.6.5.11) 0.964 17 148 GO:0016491
GO:0046872
GO:0048038
GO:0051539
AF-A0A4Q3Q8W7-F1-model_v4 deleted 0.9635 1 171

Feature Viewer

pLDDT pTM Quality
84.81 0.88 High
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Predicted Structure (AlphaFold2)

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