F415746

General Info

Members Datasets Scaffolds Average Seq Length
343 222 687 243

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0015835|Ga0501032_0015835_2057_2866
Length 269
Sequence MSEHAEAFRTQVRRSMSAGFGRRAGGQGRFARISQWMRGGHTDETAVGDGGREDLLLATAAAGLPLAPAAHPVGYRCSCDRVGCPTPARHPVSWAWQTQSTTDRAQVERWARHQPDANFITATGMTHDVLDVPREAGREALDRLLAAGVEVGPVAVTGGGAGTGEGRMMFFTLTRGTPQDEDEWWPCALDCHPETMDEHPGLRWHCRGSYVLVPPAALPGEERVEWVRGPEHPLPDPLSLLEALTDACARHHVGAEDADAFETTWPHGA

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
4 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
10 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
11 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
12 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
13 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
14 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
15 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
16 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
17 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
18 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
19 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
20 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
21 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
33 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
34 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
35 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
36 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
37 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
38 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
39 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
40 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
41 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
42 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
43 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
44 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
47 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
48 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
49 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
50 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
51 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
52 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
53 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
54 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
55 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
56 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
57 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
65 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
66 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
67 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
68 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
71 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
72 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
73 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
74 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
75 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
76 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
77 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
78 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
79 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
85 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
86 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
87 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
93 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
94 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
99 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
100 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
101 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
102 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
103 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
104 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
105 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
106 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
109 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
110 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
111 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
119 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
120 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
121 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
122 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
123 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
124 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
125 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
126 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
127 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
128 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
129 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
130 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
131 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
147 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
148 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
149 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
150 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
151 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
152 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
153 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
154 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
155 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
156 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
157 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
158 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
159 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
160 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
161 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
162 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
163 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
164 2643221548 Streptomyces sp. Root55 Isolate Unclassified
165 2643221647 Streptomyces sp. Root369 Isolate Unclassified
166 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
167 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
168 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
169 2643221714 Streptomyces sp. Root264 Isolate Unclassified
170 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
171 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
172 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
173 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
174 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
175 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
176 2808606448 Streptomyces sp. 193411 Isolate Unclassified
177 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
178 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
179 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
180 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
181 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
182 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
183 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
184 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
185 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
186 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
187 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
188 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
189 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
190 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
191 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
192 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
193 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
194 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
195 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
196 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
197 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
198 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
199 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
200 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
201 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
202 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
203 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
204 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
205 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
206 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
207 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
208 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
209 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
210 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
211 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
212 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
213 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
214 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
215 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
216 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
217 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
218 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
219 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
220 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
221 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
222 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 79.88
Metatranscriptomes 1.17
Isolates 18.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.21
Nodule 0
Rhizoplane 0.87
Rhizosphere 77.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0015835 3300049569 Bacteria 5316
2 JGI24737J22298_10045461 3300001990 Bacteria 1341
3 rootH1_10042282 3300003316 Bacteria 2690
4 rootH1_10042282 3300003323 Bacteria 4467
5 rootH2_10234835 3300003320 Bacteria 1324
6 rootH1_10007857 3300003323 Bacteria 5638
7 rootH1_10007858 3300003323 Bacteria 2941
8 Ga0006562J51391_1020726 3300003578 Bacteria 7060
9 Ga0006562J51391_1020727 3300003578 Bacteria 6150
10 Ga0006562J51391_1020729 3300003578 Bacteria 3460
11 Ga0006562J51391_1020736 3300003578 Bacteria 2660
12 Ga0068853_100725282 3300005539 Bacteria 949
13 Ga0070665_100803833 3300005548 Bacteria 953
14 Ga0075367_10134209 3300006178 Bacteria 1531
15 Ga0105251_10037375 3300009011 Bacteria 2383
16 Ga0105250_10047860 3300009092 Bacteria 1715
17 Ga0105242_10521949 3300009176 Bacteria 1133
18 Ga0105246_10015580 3300011119 Bacteria 4804
19 Ga0157369_10141212 3300013105 Bacteria 2548
20 Ga0157372_10193013 3300013307 Bacteria 2359
21 Ga0182008_10008938 3300014497 Bacteria 5435
22 Ga0182007_10001125 3300015262 Bacteria 14497
23 Ga0183367_1009 3300015688 Bacteria 484598
24 Ga0213875_10005227 3300021388 Bacteria 7006
25 Ga0209758_1003585 3300025297 Bacteria 13890
26 Ga0207713_1107181 3300025735 Bacteria 955
27 Ga0207647_10017831 3300025904 Bacteria 4817
28 Ga0307517_10007511 3300028786 Bacteria 15855
29 Ga0307515_10000140 3300028794 Bacteria 172330
30 Ga0307515_10098202 3300028794 Bacteria 3569
31 Ga0307515_10151398 3300028794 Bacteria 2423
32 Ga0268256_1017055 3300030500 Bacteria 2059
33 Ga0307511_10007606 3300030521 Bacteria 10893
34 Ga0307511_10085921 3300030521 Bacteria 2171
35 Ga0307512_10003329 3300030522 Bacteria 18851
36 Ga0307512_10022006 3300030522 Bacteria 5740
37 Ga0307512_10080692 3300030522 Bacteria 2340
38 Ga0307513_10021940 3300031456 Bacteria 7523
39 Ga0307513_10072130 3300031456 Bacteria 3601
40 Ga0307509_10032631 3300031507 Bacteria 5737
41 Ga0307509_10041240 3300031507 Bacteria 5010
42 Ga0307508_10060890 3300031616 Bacteria 3337
43 Ga0307508_10083849 3300031616 Bacteria 2769
44 Ga0307508_10182946 3300031616 Bacteria 1698
45 Ga0307514_10007394 3300031649 Bacteria 9464
46 Ga0307514_10026678 3300031649 Bacteria 4671
47 Ga0307514_10106598 3300031649 Bacteria 1998
48 Ga0307516_10011652 3300031730 Bacteria 9540
49 Ga0307516_10022381 3300031730 Bacteria 6492
50 Ga0307413_10107874 3300031824 Bacteria 1857
51 Ga0307413_10228461 3300031824 Bacteria 1365
52 Ga0307507_10014616 3300033179 Bacteria 9335
53 Ga0307507_10069583 3300033179 Bacteria 3200
54 Ga0307510_10017702 3300033180 Bacteria 8398
55 Ga0307510_10051881 3300033180 Bacteria 4332
56 Ga0307510_10102314 3300033180 Bacteria 2647
57 Ga0395900_0655433 3300037418 Bacteria 986
58 Ga0395898_0002712 3300037466 Bacteria 20438
59 Ga0395898_0218266 3300037466 Bacteria 1819
60 Ga0395898_0316208 3300037466 Bacteria 1490
61 Ga0395905_0182403 3300037471 Bacteria 1971
62 Ga0436364_0741234 3300037853 Bacteria 23339
63 Ga0439436_0010094 3300041404 Bacteria 2885
64 Ga0439439_0006735 3300041406 Bacteria 2664
65 Ga0451807_1438003 3300041486 Bacteria 1279
66 Ga0451837_1442610 3300041494 Bacteria 1616
67 Ga0451843_0850706 3300041509 Bacteria 1432
68 Ga0451853_1481757 3300041512 Bacteria 4017
69 Ga0439433_0001520 3300041999 Bacteria 4796
70 Ga0439449_0023584 3300042007 Bacteria 2300
71 Ga0439457_000179 3300042014 Bacteria 16490
72 Ga0450900_002474 3300042136 Bacteria 1962
73 Ga0466972_0003092 3300044658 Bacteria 8253
74 Ga0466972_0019181 3300044658 Bacteria 3420
75 Ga0466965_0089680 3300044683 Bacteria 1563
76 Ga0466966_0004861 3300044684 Bacteria 8839
77 Ga0466966_0007317 3300044684 Bacteria 7317
78 Ga0466961_0001432 3300044693 Bacteria 14800
79 Ga0466961_0053407 3300044693 Bacteria 2578
80 Ga0466963_0001072 3300044694 Bacteria 14270
81 Ga0466963_0001200 3300044694 Bacteria 13640
82 Ga0466964_0006695 3300044706 Bacteria 4296
83 Ga0466964_0257134 3300044706 Bacteria 864
84 Ga0466971_0000393 3300044719 Bacteria 16912
85 Ga0466971_0053024 3300044719 Bacteria 1827
86 Ga0466971_0061970 3300044719 Bacteria 1692
87 Ga0466968_0018540 3300044735 Bacteria 2792
88 Ga0466970_0002694 3300044765 Bacteria 8576
89 Ga0466970_0055855 3300044765 Bacteria 2109
90 Ga0466957_0001219 3300044842 Bacteria 13417
91 Ga0466957_0014635 3300044842 Bacteria 4571
92 Ga0466960_0053524 3300044901 Bacteria 1956
93 Ga0466959_0001635 3300045049 Bacteria 13846
94 Ga0466958_0002206 3300045836 Bacteria 9698
95 Ga0466967_0004110 3300045976 Bacteria 9725
96 Ga0466967_0479783 3300045976 Bacteria 1218
97 Ga0495627_044243 3300046453 Bacteria 1359
98 Ga0495603_0001899 3300046455 Bacteria 12336
99 Ga0495603_0002258 3300046455 Bacteria 11318
100 Ga0495603_0004348 3300046455 Bacteria 8451
101 Ga0495603_0005696 3300046455 Bacteria 7446
102 Ga0495603_0013207 3300046455 Bacteria 4991
103 Ga0495603_0037480 3300046455 Bacteria 2909
104 Ga0495603_0041873 3300046455 Bacteria 2738
105 Ga0495629_0000478 3300046459 Bacteria 33581
106 Ga0495629_0002797 3300046459 Bacteria 13304
107 Ga0495629_0003987 3300046459 Bacteria 11102
108 Ga0495629_0021556 3300046459 Bacteria 4598
109 Ga0495629_0028764 3300046459 Bacteria 3945
110 Ga0495629_0072453 3300046459 Bacteria 2404
111 Ga0495638_0131657 3300046460 Bacteria 1468
112 Ga0495651_0006309 3300046462 Bacteria 9069
113 Ga0495651_0064579 3300046462 Bacteria 2797
114 Ga0495580_0294250 3300046472 Bacteria 1106
115 Ga0495582_0019635 3300046473 Bacteria 3696
116 Ga0495582_0089220 3300046473 Bacteria 1718
117 Ga0495605_0025437 3300046474 Bacteria 3084
118 Ga0495605_0073802 3300046474 Bacteria 1606
119 Ga0495639_0008133 3300046475 Bacteria 4505
120 Ga0495662_0002216 3300046476 Bacteria 9801
121 Ga0495662_0014421 3300046476 Bacteria 3843
122 Ga0495662_0035662 3300046476 Bacteria 2400
123 Ga0495664_0002249 3300046477 Bacteria 10340
124 Ga0495594_0001665 3300046499 Bacteria 11553
125 Ga0495594_0008299 3300046499 Bacteria 5346
126 Ga0495594_0016580 3300046499 Bacteria 3884
127 Ga0495596_0086499 3300046500 Bacteria 1217
128 Ga0495607_0057907 3300046501 Bacteria 2218
129 Ga0495607_0117635 3300046501 Bacteria 1400
130 Ga0495606_0007959 3300046507 Bacteria 9329
131 Ga0495616_0157518 3300046513 Bacteria 1023
132 Ga0495618_0031085 3300046514 Bacteria 3338
133 Ga0495618_0355975 3300046514 Bacteria 901
134 Ga0495618_0389040 3300046514 Bacteria 854
135 Ga0495620_0005259 3300046515 Bacteria 7242
136 Ga0495620_0010266 3300046515 Bacteria 4942
137 Ga0495628_0332009 3300046516 Bacteria 1120
138 Ga0495630_0098665 3300046517 Bacteria 2210
139 Ga0495632_0231703 3300046519 Bacteria 833
140 Ga0495643_0019723 3300046522 Bacteria 3897
141 Ga0495648_0067792 3300046524 Bacteria 2085
142 Ga0495648_0082975 3300046524 Bacteria 1817
143 Ga0495642_0083195 3300046528 Bacteria 1350
144 Ga0495642_0103158 3300046528 Bacteria 1215
145 Ga0495642_0217681 3300046528 Bacteria 833
146 Ga0495652_0088561 3300046529 Bacteria 2537
147 Ga0495654_0081883 3300046530 Bacteria 1512
148 Ga0495640_0338199 3300046533 Bacteria 930
149 Ga0495587_0001978 3300046536 Bacteria 13676
150 Ga0495609_0013900 3300046538 Bacteria 3795
151 Ga0495609_0062314 3300046538 Bacteria 1647
152 Ga0495622_0004094 3300046557 Bacteria 6803
153 Ga0495622_0031312 3300046557 Bacteria 2487
154 Ga0495633_0018215 3300046558 Bacteria 3571
155 Ga0495667_0117100 3300046559 Bacteria 1721
156 Ga0495656_0098928 3300046615 Bacteria 1346
157 Ga0495668_0011438 3300046616 Bacteria 5311
158 Ga0495634_0003098 3300046642 Bacteria 13516
159 Ga0495634_0039797 3300046642 Bacteria 3199
160 Ga0495625_0008498 3300046660 Bacteria 8753
161 Ga0495625_0030926 3300046660 Bacteria 3988
162 Ga0495625_0078791 3300046660 Bacteria 2299
163 Ga0495635_0000395 3300046663 Bacteria 27854
164 Ga0495635_0061970 3300046663 Bacteria 2568
165 Ga0495635_0137300 3300046663 Bacteria 1666
166 Ga0495661_0064317 3300046665 Bacteria 2165
167 Ga0495588_0001811 3300046674 Bacteria 9107
168 Ga0495588_0045673 3300046674 Bacteria 2246
169 Ga0495657_0002911 3300046675 Bacteria 14208
170 Ga0495657_0041697 3300046675 Bacteria 3139
171 Ga0495657_0043701 3300046675 Bacteria 3053
172 Ga0495657_0118293 3300046675 Bacteria 1671
173 Ga0495599_0139051 3300046678 Bacteria 1507
174 Ga0495623_0068357 3300046679 Bacteria 2216
175 Ga0495646_0000781 3300046680 Bacteria 17791
176 Ga0495646_0092736 3300046680 Bacteria 1741
177 Ga0495613_0000854 3300046689 Bacteria 23375
178 Ga0495613_0026879 3300046689 Bacteria 4284
179 Ga0495613_0052528 3300046689 Bacteria 3001
180 Ga0495613_0145922 3300046689 Bacteria 1688
181 Ga0495613_0148144 3300046689 Bacteria 1675
182 Ga0495624_0053803 3300046690 Bacteria 2540
183 Ga0495671_0016757 3300046692 Bacteria 3907
184 Ga0495649_0034110 3300046694 Bacteria 2801
185 Ga0495649_0066224 3300046694 Bacteria 1938
186 Ga0495649_0131481 3300046694 Bacteria 1320
187 Ga0495589_0005471 3300046794 Bacteria 6702
188 Ga0495589_0033043 3300046794 Bacteria 2599
189 Ga0495581_0018648 3300047315 Bacteria 4029
190 Ga0495581_0093082 3300047315 Bacteria 1749
191 Ga0495604_0000156 3300047317 Bacteria 59760
192 Ga0495636_0007427 3300047318 Bacteria 4313
193 Ga0495636_0012270 3300047318 Bacteria 3393
194 Ga0495636_0121123 3300047318 Bacteria 1157
195 Ga0495674_0062204 3300047319 Bacteria 3251
196 Ga0495676_0002568 3300047321 Bacteria 16167
197 Ga0495676_0004109 3300047321 Bacteria 13267
198 Ga0495676_0005281 3300047321 Bacteria 11824
199 Ga0495676_0022360 3300047321 Bacteria 5501
200 Ga0495676_0037046 3300047321 Bacteria 4065
201 Ga0495676_0079322 3300047321 Bacteria 2496
202 Ga0495680_0013373 3300047322 Bacteria 7163
203 Ga0495683_0076515 3300047323 Bacteria 1637
204 Ga0495683_0104388 3300047323 Bacteria 1359
205 Ga0495687_001537 3300047443 Bacteria 20988
206 Ga0495687_052607 3300047443 Bacteria 1720
207 Ga0495687_067502 3300047443 Bacteria 1447
208 Ga0495675_0021961 3300047444 Bacteria 4065
209 Ga0495675_0080469 3300047444 Bacteria 2052
210 Ga0495685_002175 3300047447 Bacteria 6091
211 Ga0495685_013198 3300047447 Bacteria 2803
212 Ga0495685_019213 3300047447 Bacteria 2347
213 Ga0495685_079001 3300047447 Bacteria 1096
214 Ga0495681_0001106 3300047470 Bacteria 20474
215 Ga0495681_0142757 3300047470 Bacteria 1010
216 Ga0495684_0301306 3300047471 Bacteria 1151
217 Ga0495686_0022404 3300047472 Bacteria 4181
218 Ga0495686_0062458 3300047472 Bacteria 2310
219 Ga0495686_0119969 3300047472 Bacteria 1569
220 Ga0495686_0177840 3300047472 Bacteria 1234
221 Ga0495593_0009722 3300047673 Bacteria 5580
222 Ga0495593_0039232 3300047673 Bacteria 2554
223 Ga0495602_0023036 3300048088 Bacteria 6079
224 Ga0495614_0000270 3300048089 Bacteria 20242
225 Ga0495614_0005488 3300048089 Bacteria 5717
226 Ga0495626_0025418 3300048091 Bacteria 2897
227 Ga0496109_0055588 3300048912 Bacteria 3611
228 Ga0496110_0082751 3300048913 Bacteria 2863
229 Ga0501033_0007230 3300049570 Bacteria 8661
230 Ga0501033_0007511 3300049570 Bacteria 8481
231 Ga0501033_0046603 3300049570 Bacteria 3223
232 Ga0501034_0007457 3300049571 Bacteria 11641
233 Ga0501034_0042267 3300049571 Bacteria 4614
234 Ga0501034_0045467 3300049571 Bacteria 4436
235 Ga0501034_0244849 3300049571 Bacteria 1738
236 Ga0501036_0001380 3300049572 Bacteria 18652
237 Ga0501036_0056744 3300049572 Bacteria 3318
238 Ga0501036_0097720 3300049572 Bacteria 2482
239 Ga0501037_0129597 3300049573 Bacteria 1809
240 Ga0501037_0146031 3300049573 Bacteria 1692
241 Ga0501038_0004829 3300049574 Bacteria 12520
242 Ga0501038_0043931 3300049574 Bacteria 3884
243 Ga0501038_0065882 3300049574 Bacteria 3086
244 Ga0501039_0008633 3300049575 Bacteria 7764
245 Ga0501039_0210535 3300049575 Bacteria 1529
246 Ga0501043_0006948 3300049579 Bacteria 9020
247 Ga0501043_0025997 3300049579 Bacteria 4592
248 Ga0501046_0104953 3300049580 Bacteria 2165
249 Ga0501047_0040110 3300049581 Bacteria 4528
250 Ga0501047_0045409 3300049581 Bacteria 4248
251 Ga0501047_0052050 3300049581 Bacteria 3957
252 Ga0501047_0343244 3300049581 Bacteria 1330
253 Ga0501047_0417926 3300049581 Bacteria 1173
254 Ga0501048_0026539 3300049582 Bacteria 4217
255 Ga0501048_0293186 3300049582 Bacteria 1157
256 Ga0501069_0186918 3300049585 Bacteria 1198
257 Ga0501070_0001456 3300049586 Bacteria 21167
258 Ga0501074_0002784 3300049590 Bacteria 12232
259 Ga0501035_0001672 3300049822 Bacteria 22429
260 Ga0501035_0015436 3300049822 Bacteria 7045
261 Ga0501035_0038285 3300049822 Bacteria 4343
262 Ga0501035_0069367 3300049822 Bacteria 3125
263 Ga0501044_0000770 3300049823 Bacteria 38854
264 Ga0501044_0004955 3300049823 Bacteria 14890
265 Ga0501044_0026765 3300049823 Bacteria 6102
266 Ga0501044_0206558 3300049823 Bacteria 1920
267 Ga0501045_0111533 3300049824 Bacteria 2028
268 nmdc:mga0yw44_12073_c1 3300050492 Bacteria 3231
269 Ga0495612_0121266 3300053078 Bacteria 1125
270 Ga0500644_0001803 3300053088 Bacteria 5537
271 Ga0500640_015489 3300053095 Bacteria 3194
272 Ga0500553_045866 3300053101 Bacteria 2119
273 Ga0500560_055343 3300053107 Bacteria 1282
274 Ga0500614_053871 3300053123 Bacteria 1064
275 Ga0500573_0046100 3300053140 Bacteria 2512
276 Ga0500624_018682 3300053157 Bacteria 1095
277 Ga0500633_0025830 3300053160 Bacteria 1842
278 Ga0466962_0023972 3300061719 Bacteria 2933
279 Ga0466962_0049119 3300061719 Bacteria 2016
280 2547407701 2547132111 Bacteria 8013147
281 2585300087 2582581312 Bacteria 7308206
282 2585311502 2582581313 Bacteria 10042643
283 2585317980 2582581314 Bacteria 11452267
284 2616694444 2616644814 Bacteria 11555299
285 2616899577 2616644941 Bacteria 8510691
286 2643759456 2643221548 Bacteria 8053412
287 2644267655 2643221647 Bacteria 10741251
288 2644408678 2643221673 Bacteria 9196637
289 2644435953 2643221678 Bacteria 9540101
290 2644463128 2643221682 Bacteria 6743283
291 2644632189 2643221714 Bacteria 9015452
292 2784587551 2784132148 Bacteria 8627943
293 2785368090 2784746768 Bacteria 10036182
294 2786669144 2786546132 Bacteria 10419719
295 2804844588 2802429296 Bacteria 7227771
296 2808840750 2808606359 Bacteria 9866990
297 2808919346 2808606375 Bacteria 9466072
298 2809231115 2808606448 Bacteria 8656184
299 2811847767 2808606982 Bacteria 7791042
300 2812359431 2811994879 Bacteria 9313447
301 2812481575 2811994917 Bacteria 7761064
302 2819693960 2818991463 Bacteria 7948711
303 2852640630 2852635781 Bacteria 8251373
304 2862288517 2862281513 Bacteria 9621493
305 2862295750 2862290372 Bacteria 7471434
306 2862515128 2862507626 Bacteria 9425308
307 2862706906 2862705112 Bacteria 6563286
308 2873156877 2873151551 Bacteria 8625867
309 2877682445 2877676314 Bacteria 9512378
310 2912721473 2912715099 Bacteria 9460473
311 2912725324 2912723979 Bacteria 8557534
312 2912759674 2912757875 Bacteria 7940295
313 2919468299 2919468124 Bacteria 9133025
314 2946051217 2946045630 Bacteria 8527308
315 2946066489 2946064051 Bacteria 8957905
316 2946074734 2946072368 Bacteria 8999607
317 2947230889 2947224130 Bacteria 9938529
318 2954004173 2954002825 Bacteria 9173742
319 2954387652 2954380949 Bacteria 10050426
320 2954675442 2954673503 Bacteria 9685905
321 2954688690 2954682443 Bacteria 9862841
322 2954698461 2954691527 Bacteria 10720516
323 2954703761 2954701450 Bacteria 10834262
324 2954717442 2954711539 Bacteria 10867210
325 2954727397 2954721474 Bacteria 10456478
326 2954734395 2954731030 Bacteria 10243860
327 2954746301 2954740390 Bacteria 10229294
328 2954753278 2954749733 Bacteria 10366972
329 2954765414 2954759201 Bacteria 9358192
330 2966603585 2966598605 Bacteria 7676064
331 2990049569 2990044586 Bacteria 6603797
332 2990091395 2990088156 Bacteria 6657676
333 3006397589 3006393351 Bacteria 6615579
334 3006501991 3006493962 Bacteria 8825450
335 8008491685 8008485437 Bacteria 7198341
336 8008579913 8008574985 Bacteria 7815457
337 8023625421 8023623736 Bacteria 8593882
338 8025416114 8025413630 Bacteria 7014048
339 8025482978 8025478263 Bacteria 8209203
340 8025524741 8025524527 Bacteria 7197316
341 8025533682 8025530807 Bacteria 8495698
342 8056450455 8056447290 Bacteria 7680491
343 8056668796 8056667051 Bacteria 6953971
344 8056836595 8056829672 Bacteria 9045328
345 Ga0501032_0015835
346 JGI24737J22298_10045461
347 rootH1_10042282
348 rootH2_10234835
349 rootH1_10007857
350 rootH1_10007858
351 Ga0006562J51391_1020726
352 Ga0006562J51391_1020727
353 Ga0006562J51391_1020729
354 Ga0006562J51391_1020736
355 Ga0068853_100725282
356 Ga0070665_100803833
357 Ga0075367_10134209
358 Ga0105251_10037375
359 Ga0105250_10047860
360 Ga0105242_10521949
361 Ga0105246_10015580
362 Ga0157369_10141212
363 Ga0157372_10193013
364 Ga0182008_10008938
365 Ga0182007_10001125
366 Ga0183367_1009
367 Ga0213875_10005227
368 Ga0209758_1003585
369 Ga0207713_1107181
370 Ga0207647_10017831
371 Ga0307517_10007511
372 Ga0307515_10000140
373 Ga0307515_10098202
374 Ga0307515_10151398
375 Ga0268256_1017055
376 Ga0307511_10007606
377 Ga0307511_10085921
378 Ga0307512_10003329
379 Ga0307512_10022006
380 Ga0307512_10080692
381 Ga0307513_10021940
382 Ga0307513_10072130
383 Ga0307509_10032631
384 Ga0307509_10041240
385 Ga0307508_10060890
386 Ga0307508_10083849
387 Ga0307508_10182946
388 Ga0307514_10007394
389 Ga0307514_10026678
390 Ga0307514_10106598
391 Ga0307516_10011652
392 Ga0307516_10022381
393 Ga0307413_10107874
394 Ga0307413_10228461
395 Ga0307507_10014616
396 Ga0307507_10069583
397 Ga0307510_10017702
398 Ga0307510_10051881
399 Ga0307510_10102314
400 Ga0395900_0655433
401 Ga0395898_0002712
402 Ga0395898_0218266
403 Ga0395898_0316208
404 Ga0395905_0182403
405 Ga0436364_0741234
406 Ga0439436_0010094
407 Ga0439439_0006735
408 Ga0451807_1438003
409 Ga0451837_1442610
410 Ga0451843_0850706
411 Ga0451853_1481757
412 Ga0439433_0001520
413 Ga0439449_0023584
414 Ga0439457_000179
415 Ga0450900_002474
416 Ga0466972_0003092
417 Ga0466972_0019181
418 Ga0466965_0089680
419 Ga0466966_0004861
420 Ga0466966_0007317
421 Ga0466961_0001432
422 Ga0466961_0053407
423 Ga0466963_0001072
424 Ga0466963_0001200
425 Ga0466964_0006695
426 Ga0466964_0257134
427 Ga0466971_0000393
428 Ga0466971_0053024
429 Ga0466971_0061970
430 Ga0466968_0018540
431 Ga0466970_0002694
432 Ga0466970_0055855
433 Ga0466957_0001219
434 Ga0466957_0014635
435 Ga0466960_0053524
436 Ga0466959_0001635
437 Ga0466958_0002206
438 Ga0466967_0004110
439 Ga0466967_0479783
440 Ga0495627_044243
441 Ga0495603_0001899
442 Ga0495603_0002258
443 Ga0495603_0004348
444 Ga0495603_0005696
445 Ga0495603_0013207
446 Ga0495603_0037480
447 Ga0495603_0041873
448 Ga0495629_0000478
449 Ga0495629_0002797
450 Ga0495629_0003987
451 Ga0495629_0021556
452 Ga0495629_0028764
453 Ga0495629_0072453
454 Ga0495638_0131657
455 Ga0495651_0006309
456 Ga0495651_0064579
457 Ga0495580_0294250
458 Ga0495582_0019635
459 Ga0495582_0089220
460 Ga0495605_0025437
461 Ga0495605_0073802
462 Ga0495639_0008133
463 Ga0495662_0002216
464 Ga0495662_0014421
465 Ga0495662_0035662
466 Ga0495664_0002249
467 Ga0495594_0001665
468 Ga0495594_0008299
469 Ga0495594_0016580
470 Ga0495596_0086499
471 Ga0495607_0057907
472 Ga0495607_0117635
473 Ga0495606_0007959
474 Ga0495616_0157518
475 Ga0495618_0031085
476 Ga0495618_0355975
477 Ga0495618_0389040
478 Ga0495620_0005259
479 Ga0495620_0010266
480 Ga0495628_0332009
481 Ga0495630_0098665
482 Ga0495632_0231703
483 Ga0495643_0019723
484 Ga0495648_0067792
485 Ga0495648_0082975
486 Ga0495642_0083195
487 Ga0495642_0103158
488 Ga0495642_0217681
489 Ga0495652_0088561
490 Ga0495654_0081883
491 Ga0495640_0338199
492 Ga0495587_0001978
493 Ga0495609_0013900
494 Ga0495609_0062314
495 Ga0495622_0004094
496 Ga0495622_0031312
497 Ga0495633_0018215
498 Ga0495667_0117100
499 Ga0495656_0098928
500 Ga0495668_0011438
501 Ga0495634_0003098
502 Ga0495634_0039797
503 Ga0495625_0008498
504 Ga0495625_0030926
505 Ga0495625_0078791
506 Ga0495635_0000395
507 Ga0495635_0061970
508 Ga0495635_0137300
509 Ga0495661_0064317
510 Ga0495588_0001811
511 Ga0495588_0045673
512 Ga0495657_0002911
513 Ga0495657_0041697
514 Ga0495657_0043701
515 Ga0495657_0118293
516 Ga0495599_0139051
517 Ga0495623_0068357
518 Ga0495646_0000781
519 Ga0495646_0092736
520 Ga0495613_0000854
521 Ga0495613_0026879
522 Ga0495613_0052528
523 Ga0495613_0145922
524 Ga0495613_0148144
525 Ga0495624_0053803
526 Ga0495671_0016757
527 Ga0495649_0034110
528 Ga0495649_0066224
529 Ga0495649_0131481
530 Ga0495589_0005471
531 Ga0495589_0033043
532 Ga0495581_0018648
533 Ga0495581_0093082
534 Ga0495604_0000156
535 Ga0495636_0007427
536 Ga0495636_0012270
537 Ga0495636_0121123
538 Ga0495674_0062204
539 Ga0495676_0002568
540 Ga0495676_0004109
541 Ga0495676_0005281
542 Ga0495676_0022360
543 Ga0495676_0037046
544 Ga0495676_0079322
545 Ga0495680_0013373
546 Ga0495683_0076515
547 Ga0495683_0104388
548 Ga0495687_001537
549 Ga0495687_052607
550 Ga0495687_067502
551 Ga0495675_0021961
552 Ga0495675_0080469
553 Ga0495685_002175
554 Ga0495685_013198
555 Ga0495685_019213
556 Ga0495685_079001
557 Ga0495681_0001106
558 Ga0495681_0142757
559 Ga0495684_0301306
560 Ga0495686_0022404
561 Ga0495686_0062458
562 Ga0495686_0119969
563 Ga0495686_0177840
564 Ga0495593_0009722
565 Ga0495593_0039232
566 Ga0495602_0023036
567 Ga0495614_0000270
568 Ga0495614_0005488
569 Ga0495626_0025418
570 Ga0496109_0055588
571 Ga0496110_0082751
572 Ga0501033_0007230
573 Ga0501033_0007511
574 Ga0501033_0046603
575 Ga0501034_0007457
576 Ga0501034_0042267
577 Ga0501034_0045467
578 Ga0501034_0244849
579 Ga0501036_0001380
580 Ga0501036_0056744
581 Ga0501036_0097720
582 Ga0501037_0129597
583 Ga0501037_0146031
584 Ga0501038_0004829
585 Ga0501038_0043931
586 Ga0501038_0065882
587 Ga0501039_0008633
588 Ga0501039_0210535
589 Ga0501043_0006948
590 Ga0501043_0025997
591 Ga0501046_0104953
592 Ga0501047_0040110
593 Ga0501047_0045409
594 Ga0501047_0052050
595 Ga0501047_0343244
596 Ga0501047_0417926
597 Ga0501048_0026539
598 Ga0501048_0293186
599 Ga0501069_0186918
600 Ga0501070_0001456
601 Ga0501074_0002784
602 Ga0501035_0001672
603 Ga0501035_0015436
604 Ga0501035_0038285
605 Ga0501035_0069367
606 Ga0501044_0000770
607 Ga0501044_0004955
608 Ga0501044_0026765
609 Ga0501044_0206558
610 Ga0501045_0111533
611 nmdc:mga0yw44_12073_c1
612 Ga0495612_0121266
613 Ga0500644_0001803
614 Ga0500640_015489
615 Ga0500553_045866
616 Ga0500560_055343
617 Ga0500614_053871
618 Ga0500573_0046100
619 Ga0500624_018682
620 Ga0500633_0025830
621 Ga0466962_0023972
622 Ga0466962_0049119
623 2547407701
624 2585300087
625 2585311502
626 2585317980
627 2616694444
628 2616899577
629 2643759456
630 2644267655
631 2644408678
632 2644435953
633 2644463128
634 2644632189
635 2784587551
636 2785368090
637 2786669144
638 2804844588
639 2808840750
640 2808919346
641 2809231115
642 2811847767
643 2812359431
644 2812481575
645 2819693960
646 2852640630
647 2862288517
648 2862295750
649 2862515128
650 2862706906
651 2873156877
652 2877682445
653 2912721473
654 2912725324
655 2912759674
656 2919468299
657 2946051217
658 2946066489
659 2946074734
660 2947230889
661 2954004173
662 2954387652
663 2954675442
664 2954688690
665 2954698461
666 2954703761
667 2954717442
668 2954727397
669 2954734395
670 2954746301
671 2954753278
672 2954765414
673 2966603585
674 2990049569
675 2990091395
676 3006397589
677 3006501991
678 8008491685
679 8008579913
680 8023625421
681 8025416114
682 8025482978
683 8025524741
684 8025533682
685 8056450455
686 8056668796
687 8056836595

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09250

Prim-Pol

Bifunctional DNA primase/polymerase, N-terminal

56

239

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ro2-assembly1.cif.gz_A bifunctional dna primase/polymerase domain of orf904 from the archaeal plasmid prn1- triple mutant f50m/l107m/l110m manganese soak 0.6197 72 227
1rni-assembly1.cif.gz_A bifunctional dna primase/polymerase domain of orf904 from the archaeal plasmid prn1 0.5951 42 227
1qy7-assembly1.cif.gz_A the structure of the pii protein from the cyanobacteria synechococcus sp. pcc 7942 0.5942 107 139
6yc7-assembly1.cif.gz_C structure of adenylylated c. glutamicum glnk 0.5789 107 147
3m1m-assembly1.cif.gz_A crystal structure of the primase-polymerase from sulfolobus islandicus 0.5568 44 226
ID Description Score Start End Superfamily
1hufA00 Alpha Beta;2-Layer Sandwich;YopH tyrosine phosphatase N-terminal domain;Protein-tyrosine phosphatase, YopH, N-terminal domain 0.5492 105 149 3.30.1570.10
af_I6Y231_655_723_3.40.366.10 Alpha Beta;3-Layer(aba) Sandwich;Malonyl-Coenzyme A Acyl Carrier Protein; domain 2;Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.5472 108 150 3.40.366.10
3ab4J01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.5301 103 147 3.30.70.260
3l7pE00 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.5269 109 147 3.30.70.120
5ae3A04 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.5256 108 155 3.30.70.3450
ID Description Score Start End GO Terms
AF-E2Q1V3-F1-model_v4 Bifunctional DNA primase/polymerase 0.8503 37 230
AF-A0A0L8QUQ9-F1-model_v4 deleted 0.8498 94 207
AF-A0A5C4VX94-F1-model_v4 DNA primase 0.8456 96 222
AF-A0A5C4VX94-F1-model_v4 DNA primase 0.8332 96 222
AF-A0A0L8QUQ9-F1-model_v4 deleted 0.8226 94 207

Map