F415183

General Info

Members Datasets Scaffolds Average Seq Length
342 207 341 216

Family's Representative Sequence

Representative Sequence 3300025913|Ga0207695_10221303|Ga0207695_102213032
Length 252
Sequence MDLIDAAPYSVLGSTAALWYHAVPLSRETGISMSGRPQEERDEISVRGRILEAAFASFMKNGYAATSTAEIAARARVSKREIYALIGNKQQMLVACISERARRLQVTGDLPVPRDREAFARVLASFGRQLVREISDPTVVAVYRLAIAEAVQAREVAQALHSIGRQTSQSALGNIMAQALESGLLKGSPAECAEQFSGLLWGNLMIGLLLGVARRPTPQEIAARADQATAAFLQLHPMPAATMGRSRRRPRP

Samples

Sample ID Description Type Environment
1 2842482326 Rhizobium lusitanum SEMIA 4060 Isolate Nodule
2 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
15 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
23 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
24 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
25 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
26 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
40 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
44 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
52 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
53 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
54 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
59 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
60 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
72 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
75 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
76 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
77 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
78 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
79 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
83 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
85 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
86 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
87 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
88 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
89 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
133 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
134 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
135 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
136 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
137 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
138 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
139 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
142 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
143 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
144 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
145 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
146 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
147 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
148 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
149 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
150 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
151 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
154 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
155 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
156 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
157 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
158 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
161 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
162 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
167 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
187 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
188 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
189 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
190 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
191 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
192 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
193 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
198 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
199 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
200 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
201 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
202 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
203 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
204 3300053115 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 endosphere Metagenome Endosphere
205 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
206 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
207 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.71
Metatranscriptomes 0
Isolates 0.29

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.63
Nodule 0.29
Rhizoplane 5.26
Rhizosphere 89.77
Stem 0
Stem Tuber 0
Unclassified 2.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25157J39369_1000556 3300002741 Bacteria 22314
2 JGI25165J46597_1000672 3300003214 Bacteria 27585
3 rootH1_10080614 3300003316 Unclassified 1545
4 rootL2_10137193 3300003322 Unclassified 4718
5 rootH1_10085478 3300003323 Bacteria 6201
6 Ga0070658_10024419 3300005327 Bacteria 4849
7 Ga0070676_10039404 3300005328 Bacteria 2732
8 Ga0070683_100019062 3300005329 Bacteria 6087
9 Ga0070680_100144369 3300005336 Bacteria 1996
10 Ga0070680_100347552 3300005336 Bacteria 1261
11 Ga0070682_100050780 3300005337 Bacteria 2591
12 Ga0070682_100055220 3300005337 Bacteria 2494
13 Ga0068868_100018542 3300005338 Bacteria 5204
14 Ga0070660_100000161 3300005339 Bacteria 43884
15 Ga0070660_100058012 3300005339 Bacteria 3001
16 Ga0070691_10300760 3300005341 Bacteria 876
17 Ga0070661_100002317 3300005344 Bacteria 13077
18 Ga0070661_100116613 3300005344 Bacteria 1997
19 Ga0070661_100269978 3300005344 Bacteria 1317
20 Ga0070668_100082981 3300005347 Bacteria 2515
21 Ga0070669_100132065 3300005353 Bacteria 1917
22 Ga0070671_100020187 3300005355 Bacteria 5430
23 Ga0070673_100022669 3300005364 Bacteria 4574
24 Ga0070659_100001591 3300005366 Bacteria 16357
25 Ga0070659_100005235 3300005366 Bacteria 9304
26 Ga0070659_100040553 3300005366 Bacteria 3639
27 Ga0070659_100044191 3300005366 Bacteria 3487
28 Ga0070667_100286272 3300005367 Bacteria 1481
29 Ga0070667_100334759 3300005367 Bacteria 1368
30 Ga0070667_100471962 3300005367 Bacteria 1148
31 Ga0070709_10064586 3300005434 Bacteria 2341
32 Ga0070714_100000735 3300005435 Bacteria 23207
33 Ga0070714_100670471 3300005435 Bacteria 999
34 Ga0070714_100832098 3300005435 Bacteria 895
35 Ga0070713_100001236 3300005436 Bacteria 16338
36 Ga0070713_100054962 3300005436 Unclassified 3306
37 Ga0070713_100251906 3300005436 Bacteria 1611
38 Ga0070713_100279828 3300005436 Bacteria 1530
39 Ga0070713_100361931 3300005436 Bacteria 1348
40 Ga0070710_10504455 3300005437 Bacteria 829
41 Ga0070711_100156724 3300005439 Bacteria 1722
42 Ga0070711_100238922 3300005439 Bacteria 1420
43 Ga0070708_100011597 3300005445 Bacteria 7174
44 Ga0070708_100024887 3300005445 Bacteria 5114
45 Ga0070663_100006990 3300005455 Bacteria 6835
46 Ga0070678_100067637 3300005456 Bacteria 2660
47 Ga0070662_100000149 3300005457 Bacteria 39863
48 Ga0070662_100295723 3300005457 Bacteria 1314
49 Ga0070681_10212743 3300005458 Bacteria 1849
50 Ga0070706_100402332 3300005467 Bacteria 1274
51 Ga0070698_100037251 3300005471 Bacteria 5016
52 Ga0070699_100635283 3300005518 Bacteria 974
53 Ga0070679_100135731 3300005530 Bacteria 2442
54 Ga0070679_100352887 3300005530 Unclassified 1418
55 Ga0070684_100060276 3300005535 Bacteria 3318
56 Ga0070684_100170063 3300005535 Bacteria 1979
57 Ga0070697_100158282 3300005536 Bacteria 1913
58 Ga0070697_100399467 3300005536 Bacteria 1192
59 Ga0068853_100029719 3300005539 Bacteria 4610
60 Ga0068853_100258558 3300005539 Bacteria 1600
61 Ga0068853_100470993 3300005539 Bacteria 1183
62 Ga0068853_100493083 3300005539 Bacteria 1156
63 Ga0068853_100505027 3300005539 Unclassified 1142
64 Ga0070696_100125704 3300005546 Bacteria 1860
65 Ga0070665_100849331 3300005548 Bacteria 926
66 Ga0068855_100000814 3300005563 Bacteria 38635
67 Ga0068855_100051483 3300005563 Bacteria 4850
68 Ga0068855_100058097 3300005563 Bacteria 4532
69 Ga0068855_100174200 3300005563 Bacteria 2435
70 Ga0068855_100434348 3300005563 Bacteria 1435
71 Ga0070664_100000371 3300005564 Bacteria 33275
72 Ga0068854_100059004 3300005578 Bacteria 2772
73 Ga0068854_100107350 3300005578 Bacteria 2101
74 Ga0068856_100000381 3300005614 Bacteria 48540
75 Ga0068856_100145602 3300005614 Bacteria 2377
76 Ga0068856_100239942 3300005614 Bacteria 1828
77 Ga0068852_100020708 3300005616 Bacteria 5233
78 Ga0068852_100065535 3300005616 Bacteria 3169
79 Ga0068852_100119712 3300005616 Bacteria 2408
80 Ga0068852_100533062 3300005616 Unclassified 1173
81 Ga0068851_10085671 3300005834 Bacteria 1652
82 Ga0068863_100037070 3300005841 Bacteria 4643
83 Ga0068858_100002763 3300005842 Bacteria 17639
84 Ga0068860_100110653 3300005843 Bacteria 2626
85 Ga0068862_100168260 3300005844 Bacteria 1961
86 Ga0081539_10005474 3300005985 Bacteria 12920
87 Ga0070717_10424181 3300006028 Bacteria 1196
88 Ga0070717_10782808 3300006028 Bacteria 868
89 Ga0070715_10271804 3300006163 Bacteria 895
90 Ga0070716_100018190 3300006173 Bacteria 3657
91 Ga0070716_100019706 3300006173 Bacteria 3529
92 Ga0070716_100152685 3300006173 Bacteria 1487
93 Ga0070712_100005186 3300006175 Bacteria 8059
94 Ga0070712_100070130 3300006175 Bacteria 2503
95 Ga0097621_100010830 3300006237 Bacteria 6690
96 Ga0097621_100537370 3300006237 Bacteria 1063
97 Ga0068871_100017153 3300006358 Bacteria 5472
98 Ga0075428_100326834 3300006844 Bacteria 1648
99 Ga0075430_100040705 3300006846 Bacteria 3933
100 Ga0075430_100061899 3300006846 Bacteria 3144
101 Ga0075430_100360415 3300006846 Bacteria 1201
102 Ga0075431_100078884 3300006847 Bacteria 3399
103 Ga0075431_100177499 3300006847 Bacteria 2187
104 Ga0075429_100134990 3300006880 Bacteria 2159
105 Ga0075435_100845021 3300007076 Bacteria 798
106 Ga0105240_10000685 3300009093 Bacteria 62397
107 Ga0105240_10014259 3300009093 Bacteria 10856
108 Ga0105240_10051004 3300009093 Bacteria 5211
109 Ga0105240_10157086 3300009093 Bacteria 2704
110 Ga0105240_10162978 3300009093 Plasmid 2647
111 Ga0105240_10166278 3300009093 Bacteria 2616
112 Ga0105240_10271582 3300009093 Bacteria 1952
113 Ga0105247_10047868 3300009101 Bacteria 2626
114 Ga0105247_10076003 3300009101 Bacteria 2108
115 Ga0105241_10091973 3300009174 Bacteria 2395
116 Ga0105242_10678933 3300009176 Bacteria 1005
117 Ga0105237_10074726 3300009545 Unclassified 3381
118 Ga0105237_10107428 3300009545 Bacteria 2783
119 Ga0105237_10246886 3300009545 Bacteria 1787
120 Ga0105238_10058626 3300009551 Bacteria 3858
121 Ga0105238_10095427 3300009551 Bacteria 2961
122 Ga0105238_10103673 3300009551 Bacteria 2826
123 Ga0105238_10222720 3300009551 Bacteria 1863
124 Ga0105249_10399777 3300009553 Bacteria 1404
125 Ga0105239_10311592 3300010375 Bacteria 1774
126 Ga0105239_10401834 3300010375 Bacteria 1550
127 Ga0157373_10000246 3300013100 Bacteria 44392
128 Ga0157373_10067329 3300013100 Bacteria 2532
129 Ga0157371_10000403 3300013102 Bacteria 54162
130 Ga0157371_10319561 3300013102 Unclassified 1126
131 Ga0157370_10090765 3300013104 Unclassified 2868
132 Ga0157370_10524494 3300013104 Bacteria 1087
133 Ga0157369_10005605 3300013105 Bacteria 14579
134 Ga0157369_10006290 3300013105 Bacteria 13784
135 Ga0157369_10076976 3300013105 Bacteria 3576
136 Ga0157369_10159696 3300013105 Bacteria 2379
137 Ga0157369_10494072 3300013105 Bacteria 1266
138 Ga0157374_10350909 3300013296 Bacteria 1466
139 Ga0157378_10491867 3300013297 Bacteria 1224
140 Ga0157378_10557503 3300013297 Bacteria 1152
141 Ga0157378_10939840 3300013297 Unclassified 897
142 Ga0163162_10050896 3300013306 Bacteria 4154
143 Ga0163162_10163363 3300013306 Bacteria 2350
144 Ga0157372_10002109 3300013307 Bacteria 21612
145 Ga0157372_10003956 3300013307 Bacteria 15913
146 Ga0157372_10032306 3300013307 Bacteria 5738
147 Ga0157375_10025905 3300013308 Bacteria 5457
148 Ga0157375_10039138 3300013308 Bacteria 4561
149 Ga0157379_10015985 3300014968 Bacteria 6597
150 Ga0157376_10003549 3300014969 Bacteria 10752
151 Ga0157376_10209671 3300014969 Bacteria 1798
152 Ga0213872_10102304 3300021361 Bacteria 1276
153 Ga0209674_100984 3300025226 Bacteria 8793
154 Ga0207427_104103 3300025231 Bacteria 2616
155 Ga0209437_100023 3300025233 Bacteria 614195
156 Ga0209026_1000017 3300025250 Bacteria 385214
157 Ga0209759_1006403 3300025256 Bacteria 3960
158 Ga0209233_1000062 3300025261 Bacteria 399685
159 Ga0209233_1003415 3300025261 Bacteria 5598
160 Ga0207656_10037732 3300025321 Bacteria 2035
161 Ga0207710_10098023 3300025900 Bacteria 1380
162 Ga0207710_10202394 3300025900 Bacteria 981
163 Ga0207647_10115136 3300025904 Bacteria 1588
164 Ga0207699_10006794 3300025906 Bacteria 5563
165 Ga0207699_10767200 3300025906 Bacteria 708
166 Ga0207645_10248273 3300025907 Bacteria 1177
167 Ga0207705_10245722 3300025909 Bacteria 1364
168 Ga0207684_10140333 3300025910 Bacteria 2077
169 Ga0207707_10221649 3300025912 Bacteria 1646
170 Ga0207707_10301198 3300025912 Unclassified 1386
171 Ga0207695_10000007 3300025913 Bacteria 1092551
172 Ga0207695_10017916 3300025913 Bacteria 8203
173 Ga0207695_10156932 3300025913 Unclassified 2210
174 Ga0207695_10178947 3300025913 Bacteria 2042
175 Ga0207695_10221303 3300025913 Bacteria 1800
176 Ga0207695_10495055 3300025913 Bacteria 1104
177 Ga0207671_10024168 3300025914 Bacteria 4573
178 Ga0207671_10068937 3300025914 Unclassified 2636
179 Ga0207693_10010063 3300025915 Bacteria 7682
180 Ga0207693_10142338 3300025915 Bacteria 1885
181 Ga0207663_10140239 3300025916 Bacteria 1683
182 Ga0207663_10537264 3300025916 Bacteria 912
183 Ga0207660_10260086 3300025917 Bacteria 1372
184 Ga0207660_10478931 3300025917 Bacteria 1008
185 Ga0207657_10021836 3300025919 Bacteria 6011
186 Ga0207657_10057967 3300025919 Bacteria 3335
187 Ga0207649_10048608 3300025920 Bacteria 2617
188 Ga0207649_10063757 3300025920 Bacteria 2328
189 Ga0207649_10290242 3300025920 Bacteria 1192
190 Ga0207649_10465995 3300025920 Bacteria 956
191 Ga0207652_10170241 3300025921 Bacteria 1954
192 Ga0207652_10236693 3300025921 Bacteria 1646
193 Ga0207652_10272128 3300025921 Bacteria 1528
194 Ga0207646_10389681 3300025922 Bacteria 1259
195 Ga0207681_10138349 3300025923 Bacteria 1810
196 Ga0207694_10079151 3300025924 Bacteria 2577
197 Ga0207694_10116518 3300025924 Bacteria 2129
198 Ga0207659_10064978 3300025926 Bacteria 2643
199 Ga0207700_10004249 3300025928 Bacteria 8417
200 Ga0207700_10152836 3300025928 Bacteria 1909
201 Ga0207700_10155585 3300025928 Bacteria 1894
202 Ga0207700_10370378 3300025928 Bacteria 1251
203 Ga0207664_10004402 3300025929 Bacteria 9539
204 Ga0207664_10007477 3300025929 Bacteria 7575
205 Ga0207664_10076532 3300025929 Bacteria 2709
206 Ga0207664_10802416 3300025929 Bacteria 847
207 Ga0207644_10006869 3300025931 Bacteria 7414
208 Ga0207690_10001326 3300025932 Bacteria 15559
209 Ga0207690_10019896 3300025932 Bacteria 4139
210 Ga0207690_10703011 3300025932 Unclassified 831
211 Ga0207706_10000002 3300025933 Bacteria 360309
212 Ga0207665_10025695 3300025939 Bacteria 3886
213 Ga0207665_10121877 3300025939 Bacteria 1843
214 Ga0207689_10003989 3300025942 Bacteria 13424
215 Ga0207689_10209106 3300025942 Bacteria 1612
216 Ga0207661_10027971 3300025944 Bacteria 4313
217 Ga0207679_10001031 3300025945 Bacteria 17798
218 Ga0207667_10000429 3300025949 Bacteria 56506
219 Ga0207667_10000771 3300025949 Bacteria 41653
220 Ga0207667_10053808 3300025949 Bacteria 4234
221 Ga0207667_10151832 3300025949 Bacteria 2384
222 Ga0207667_10303124 3300025949 Bacteria 1632
223 Ga0207667_10654290 3300025949 Bacteria 1056
224 Ga0207651_10200899 3300025960 Bacteria 1597
225 Ga0207712_10249605 3300025961 Bacteria 1433
226 Ga0207640_10036653 3300025981 Bacteria 3080
227 Ga0207640_10102724 3300025981 Bacteria 2008
228 Ga0207658_10405334 3300025986 Bacteria 1199
229 Ga0207677_10066241 3300026023 Bacteria 2524
230 Ga0207639_10001521 3300026041 Bacteria 15579
231 Ga0207639_10503876 3300026041 Bacteria 1106
232 Ga0207639_10702430 3300026041 Bacteria 938
233 Ga0207678_10007356 3300026067 Bacteria 9750
234 Ga0207702_10000925 3300026078 Bacteria 30287
235 Ga0207702_10173673 3300026078 Bacteria 1978
236 Ga0207702_10273498 3300026078 Bacteria 1594
237 Ga0207702_10634922 3300026078 Bacteria 1050
238 Ga0207702_10800487 3300026078 Bacteria 931
239 Ga0207641_10026547 3300026088 Bacteria 4781
240 Ga0207698_10009472 3300026142 Bacteria 6214
241 Ga0207698_10137246 3300026142 Bacteria 2100
242 Ga0207698_10501275 3300026142 Bacteria 1181
243 Ga0209588_1021586 3300027671 Bacteria 2024
244 Ga0268265_10079789 3300028380 Bacteria 2579
245 Ga0268264_10101390 3300028381 Bacteria 2502
246 Ga0268264_10650989 3300028381 Bacteria 1043
247 Ga0307517_10242175 3300028786 Bacteria 1069
248 Ga0373943_0045695 3300035170 Bacteria 2135
249 Ga0373931_0017137 3300035691 Bacteria 3577
250 Ga0373927_0048671 3300035695 Bacteria 2742
251 Ga0373947_0153183 3300035725 Bacteria 1486
252 Ga0395900_0973435 3300037418 Bacteria 769
253 Ga0395898_0045323 3300037466 Bacteria 4323
254 Ga0395898_0148776 3300037466 Bacteria 2241
255 Ga0395898_0576886 3300037466 Bacteria 1067
256 Ga0395905_0035148 3300037471 Bacteria 4705
257 Ga0395905_0079067 3300037471 Bacteria 3082
258 Ga0395905_0160675 3300037471 Unclassified 2112
259 Ga0395901_0015978 3300038443 Bacteria 7648
260 Ga0436361_0722545 3300039447 Unclassified 1950
261 Ga0436362_0809161 3300039453 Bacteria 1832
262 Ga0466961_0198314 3300044693 Bacteria 1242
263 Ga0466961_0498219 3300044693 Unclassified 736
264 Ga0466957_0058423 3300044842 Bacteria 2363
265 Ga0466960_0106995 3300044901 Bacteria 1448
266 Ga0466959_0060760 3300045049 Unclassified 2749
267 Ga0466959_0239477 3300045049 Bacteria 1254
268 Ga0495603_0110432 3300046455 Bacteria 1604
269 Ga0495651_0002843 3300046462 Bacteria 13408
270 Ga0495580_0101769 3300046472 Bacteria 1998
271 Ga0495580_0319948 3300046472 Bacteria 1054
272 Ga0495594_0375500 3300046499 Bacteria 809
273 Ga0495608_0393049 3300046511 Bacteria 849
274 Ga0495645_0341853 3300046543 Bacteria 966
275 Ga0495667_0004415 3300046559 Bacteria 9487
276 Ga0495658_0411247 3300046683 Bacteria 863
277 Ga0495669_0137289 3300046684 Bacteria 1153
278 Ga0495600_0037004 3300046809 Bacteria 3172
279 Ga0495581_0066110 3300047315 Bacteria 2091
280 Ga0495676_0183888 3300047321 Bacteria 1463
281 Ga0495680_0004916 3300047322 Bacteria 12652
282 Ga0495675_0031613 3300047444 Bacteria 3379
283 Ga0496100_0313282 3300048903 Bacteria 1177
284 Ga0496101_0000225 3300048904 Bacteria 42158
285 Ga0496101_0176338 3300048904 Bacteria 1644
286 Ga0496102_0001634 3300048905 Bacteria 19759
287 Ga0496102_0701149 3300048905 Bacteria 935
288 Ga0496103_0007958 3300048906 Bacteria 6299
289 Ga0496104_0034480 3300048907 Bacteria 4720
290 Ga0496104_0097553 3300048907 Bacteria 2813
291 Ga0496106_0000479 3300048909 Bacteria 28403
292 Ga0496106_0014532 3300048909 Bacteria 5817
293 Ga0496107_0012079 3300048910 Bacteria 6023
294 Ga0496107_0023196 3300048910 Bacteria 4387
295 Ga0496111_0627956 3300048914 Bacteria 785
296 Ga0496113_0325837 3300048916 Bacteria 1232
297 Ga0496114_0000508 3300048917 Bacteria 28503
298 Ga0496114_0303781 3300048917 Unclassified 1409
299 Ga0496115_0039674 3300048918 Bacteria 3741
300 Ga0496115_0555407 3300048918 Bacteria 917
301 Ga0501031_0024948 3300049568 Bacteria 3899
302 Ga0501032_0023846 3300049569 Bacteria 4225
303 Ga0501033_0025859 3300049570 Bacteria 4419
304 Ga0501034_0032202 3300049571 Bacteria 5326
305 Ga0501036_0001755 3300049572 Bacteria 16850
306 Ga0501037_0008352 3300049573 Bacteria 7588
307 Ga0501038_0004814 3300049574 Bacteria 12537
308 Ga0501039_0021582 3300049575 Bacteria 4939
309 Ga0501040_0355916 3300049576 Unclassified 1049
310 Ga0501042_0025059 3300049578 Bacteria 4188
311 Ga0501043_0050626 3300049579 Bacteria 3264
312 Ga0501046_0048004 3300049580 Bacteria 3382
313 Ga0501047_0146640 3300049581 Bacteria 2236
314 Ga0501048_0050279 3300049582 Bacteria 2968
315 Ga0501067_0002372 3300049583 Bacteria 10429
316 Ga0501068_0015240 3300049584 Bacteria 4411
317 Ga0501070_0084103 3300049586 Bacteria 2634
318 Ga0501073_0101243 3300049589 Bacteria 2000
319 Ga0501074_0005703 3300049590 Bacteria 8974
320 Ga0501079_0023738 3300049741 Bacteria 4705
321 Ga0501080_0019376 3300049742 Bacteria 6304
322 Ga0501083_0036993 3300049744 Bacteria 3326
323 Ga0501035_0059066 3300049822 Bacteria 3415
324 Ga0501044_0036317 3300049823 Bacteria 5155
325 Ga0501045_0039792 3300049824 Bacteria 3421
326 nmdc:mga05p37_158552_c1 3300050507 Bacteria 2764
327 nmdc:mga09592_129122_c1 3300050508 Bacteria 2174
328 nmdc:mga09592_43404_c1 3300050508 Bacteria 3785
329 nmdc:mga0qj67_10627_c1 3300050509 Bacteria 6879
330 nmdc:mga0qj67_14367_c1 3300050509 Bacteria 5987
331 nmdc:mga0qj67_524816_c1 3300050509 Bacteria 951
332 nmdc:mga06r32_32819_c1 3300050510 Bacteria 4888
333 nmdc:mga06r32_62663_c1 3300050510 Bacteria 3583
334 nmdc:mga0rr50_265575_c1 3300050513 Bacteria 1429
335 nmdc:mga0rr50_709629_c1 3300050513 Bacteria 858
336 nmdc:mga08x19_86750_c1 3300050514 Bacteria 2061
337 Ga0500556_0114244 3300053104 Bacteria 1049
338 Ga0500591_185167 3300053115 Bacteria 746
339 Ga0500639_192095 3300053163 Bacteria 888
340 Ga0501084_0046533 3300054114 Bacteria 3634
341 Ga0501082_0007959 3300060353 Bacteria 9152

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005327 Ga0070658_10024419 Ga0070658_100244197 199
2 3300005339 Ga0070660_100058012 Ga0070660_1000580122 199
3 3300005344 Ga0070661_100269978 Ga0070661_1002699782 199
4 3300005366 Ga0070659_100044191 Ga0070659_1000441914 199
5 3300005539 Ga0068853_100470993 Ga0068853_1004709932 199
6 3300005563 Ga0068855_100434348 Ga0068855_1004343482 199
7 3300005614 Ga0068856_100239942 Ga0068856_1002399422 199
8 3300005616 Ga0068852_100020708 Ga0068852_1000207083 199
9 3300009093 Ga0105240_10014259 Ga0105240_100142595 199
10 3300009551 Ga0105238_10103673 Ga0105238_101036734 199
11 3300013105 Ga0157369_10006290 Ga0157369_100062903 199
12 3300013307 Ga0157372_10003956 Ga0157372_100039568 199
13 3300025919 Ga0207657_10057967 Ga0207657_100579675 199
14 3300025920 Ga0207649_10465995 Ga0207649_104659952 199
15 3300025924 Ga0207694_10116518 Ga0207694_101165182 199
16 3300025929 Ga0207664_10076532 Ga0207664_100765322 199
17 3300025949 Ga0207667_10151832 Ga0207667_101518322 199
18 3300026041 Ga0207639_10702430 Ga0207639_107024301 199
19 3300026078 Ga0207702_10273498 Ga0207702_102734982 199
20 3300026142 Ga0207698_10009472 Ga0207698_100094724 199
21 3300044842 Ga0466957_0058423 Ga0466957_0058423_1634_2236 199
22 3300044693 Ga0466961_0198314 Ga0466961_0198314_189_791 200
23 3300045049 Ga0466959_0239477 Ga0466959_0239477_430_1032 200
24 3300009093 Ga0105240_10271582 Ga0105240_102715821 201
25 3300009545 Ga0105237_10246886 Ga0105237_102468861 201
26 3300009551 Ga0105238_10222720 Ga0105238_102227201 201
27 3300025909 Ga0207705_10245722 Ga0207705_102457221 202
28 3300053104 Ga0500556_0114244 Ga0500556_0114244_46_705 203
29 3300050507 nmdc:mga05p37_158552_c1 nmdc:mga05p37_158552_c1_1406_2020 204
30 3300050508 nmdc:mga09592_43404_c1 nmdc:mga09592_43404_c1_2001_2615 204
31 3300050509 nmdc:mga0qj67_10627_c1 nmdc:mga0qj67_10627_c1_3851_4465 204
32 3300050510 nmdc:mga06r32_62663_c1 nmdc:mga06r32_62663_c1_1360_1974 204
33 3300044901 Ga0466960_0106995 Ga0466960_0106995_394_1014 205
34 3300005328 Ga0070676_10039404 Ga0070676_100394042 209
35 3300005336 Ga0070680_100347552 Ga0070680_1003475521 209
36 3300005339 Ga0070660_100000161 Ga0070660_10000016131 209
37 3300005344 Ga0070661_100002317 Ga0070661_10000231713 209
38 3300005347 Ga0070668_100082981 Ga0070668_1000829812 209
39 3300005353 Ga0070669_100132065 Ga0070669_1001320652 209
40 3300005355 Ga0070671_100020187 Ga0070671_1000201873 209
41 3300005364 Ga0070673_100022669 Ga0070673_1000226695 209
42 3300005366 Ga0070659_100001591 Ga0070659_10000159114 209
43 3300005367 Ga0070667_100286272 Ga0070667_1002862722 209
44 3300005455 Ga0070663_100006990 Ga0070663_1000069907 209
45 3300005456 Ga0070678_100067637 Ga0070678_1000676372 209
46 3300005457 Ga0070662_100000149 Ga0070662_10000014932 209
47 3300005539 Ga0068853_100029719 Ga0068853_1000297192 209
48 3300005563 Ga0068855_100000814 Ga0068855_1000008149 209
49 3300005564 Ga0070664_100000371 Ga0070664_10000037115 209
50 3300005578 Ga0068854_100059004 Ga0068854_1000590042 209
51 3300005614 Ga0068856_100000381 Ga0068856_10000038116 209
52 3300009545 Ga0105237_10107428 Ga0105237_101074282 209
53 3300010375 Ga0105239_10311592 Ga0105239_103115921 209
54 3300013100 Ga0157373_10000246 Ga0157373_1000024614 209
55 3300013102 Ga0157371_10000403 Ga0157371_1000040322 209
56 3300013105 Ga0157369_10159696 Ga0157369_101596962 209
57 3300013297 Ga0157378_10557503 Ga0157378_105575032 209
58 3300013307 Ga0157372_10002109 Ga0157372_100021094 209
59 3300013308 Ga0157375_10025905 Ga0157375_100259053 209
60 3300014969 Ga0157376_10209671 Ga0157376_102096714 209
61 3300025907 Ga0207645_10248273 Ga0207645_102482732 209
62 3300025919 Ga0207657_10021836 Ga0207657_100218362 209
63 3300025920 Ga0207649_10063757 Ga0207649_100637573 209
64 3300025923 Ga0207681_10138349 Ga0207681_101383493 209
65 3300025926 Ga0207659_10064978 Ga0207659_100649783 209
66 3300025931 Ga0207644_10006869 Ga0207644_100068693 209
67 3300025932 Ga0207690_10001326 Ga0207690_100013263 209
68 3300025933 Ga0207706_10000002 Ga0207706_10000002108 209
69 3300025945 Ga0207679_10001031 Ga0207679_100010312 209
70 3300025949 Ga0207667_10000771 Ga0207667_1000077134 209
71 3300025960 Ga0207651_10200899 Ga0207651_102008992 209
72 3300025981 Ga0207640_10036653 Ga0207640_100366533 209
73 3300025986 Ga0207658_10405334 Ga0207658_104053342 209
74 3300026041 Ga0207639_10001521 Ga0207639_100015213 209
75 3300026067 Ga0207678_10007356 Ga0207678_100073568 209
76 3300026078 Ga0207702_10000925 Ga0207702_100009252 209
77 3300037418 Ga0395900_0973435 Ga0395900_0973435_86_727 209
78 3300048903 Ga0496100_0313282 Ga0496100_0313282_125_754 209
79 3300048904 Ga0496101_0176338 Ga0496101_0176338_970_1599 209
80 3300048909 Ga0496106_0000479 Ga0496106_0000479_5500_6129 209
81 3300048910 Ga0496107_0012079 Ga0496107_0012079_3807_4436 209
82 3300005435 Ga0070714_100000735 Ga0070714_1000007357 210
83 3300005518 Ga0070699_100635283 Ga0070699_1006352831 210
84 3300009101 Ga0105247_10047868 Ga0105247_100478684 210
85 3300009174 Ga0105241_10091973 Ga0105241_100919732 210
86 3300014968 Ga0157379_10015985 Ga0157379_100159852 210
87 3300025929 Ga0207664_10007477 Ga0207664_100074777 210
88 3300035691 Ga0373931_0017137 Ga0373931_0017137_1649_2290 210
89 3300046684 Ga0495669_0137289 Ga0495669_0137289_424_1065 210
90 3300048905 Ga0496102_0001634 Ga0496102_0001634_9368_10009 210
91 3300048906 Ga0496103_0007958 Ga0496103_0007958_756_1397 210
92 3300048907 Ga0496104_0034480 Ga0496104_0034480_3936_4577 210
93 3300048909 Ga0496106_0014532 Ga0496106_0014532_1427_2068 210
94 3300048910 Ga0496107_0023196 Ga0496107_0023196_499_1140 210
95 3300048918 Ga0496115_0555407 Ga0496115_0555407_21_662 210
96 3300053115 Ga0500591_185167 Ga0500591_185167_93_728 210
97 3300053163 Ga0500639_192095 Ga0500639_192095_132_767 210
98 3300005985 Ga0081539_10005474 Ga0081539_100054746 211
99 3300009553 Ga0105249_10399777 Ga0105249_103997772 211
100 3300013297 Ga0157378_10939840 Ga0157378_109398401 211
101 3300025921 Ga0207652_10272128 Ga0207652_102721282 211
102 3300044693 Ga0466961_0498219 Ga0466961_0498219_33_671 211
103 3300045049 Ga0466959_0060760 Ga0466959_0060760_1071_1709 211
104 3300005337 Ga0070682_100050780 Ga0070682_1000507802 212
105 3300005366 Ga0070659_100005235 Ga0070659_1000052358 212
106 3300005366 Ga0070659_100040553 Ga0070659_1000405532 212
107 3300005458 Ga0070681_10212743 Ga0070681_102127432 212
108 3300005530 Ga0070679_100135731 Ga0070679_1001357312 212
109 3300005535 Ga0070684_100170063 Ga0070684_1001700632 212
110 3300005539 Ga0068853_100505027 Ga0068853_1005050272 212
111 3300005563 Ga0068855_100058097 Ga0068855_1000580974 212
112 3300005563 Ga0068855_100174200 Ga0068855_1001742002 212
113 3300005616 Ga0068852_100119712 Ga0068852_1001197122 212
114 3300009093 Ga0105240_10051004 Ga0105240_100510045 212
115 3300013102 Ga0157371_10319561 Ga0157371_103195612 212
116 3300013104 Ga0157370_10524494 Ga0157370_105244941 212
117 3300013105 Ga0157369_10005605 Ga0157369_100056052 212
118 3300013307 Ga0157372_10032306 Ga0157372_100323064 212
119 3300025912 Ga0207707_10221649 Ga0207707_102216492 212
120 3300025920 Ga0207649_10290242 Ga0207649_102902421 212
121 3300025921 Ga0207652_10236693 Ga0207652_102366932 212
122 3300025924 Ga0207694_10079151 Ga0207694_100791513 212
123 3300025932 Ga0207690_10019896 Ga0207690_100198962 212
124 3300025932 Ga0207690_10703011 Ga0207690_107030111 212
125 3300025949 Ga0207667_10053808 Ga0207667_100538083 212
126 3300025949 Ga0207667_10303124 Ga0207667_103031242 212
127 3300026142 Ga0207698_10137246 Ga0207698_101372463 212
128 3300037466 Ga0395898_0045323 Ga0395898_0045323_1061_1867 212
129 3300046462 Ga0495651_0002843 Ga0495651_0002843_8675_9319 212
130 3300046511 Ga0495608_0393049 Ga0495608_0393049_82_726 212
131 3300046543 Ga0495645_0341853 Ga0495645_0341853_101_745 212
132 3300046559 Ga0495667_0004415 Ga0495667_0004415_5729_6373 212
133 3300046809 Ga0495600_0037004 Ga0495600_0037004_940_1584 212
134 3300047322 Ga0495680_0004916 Ga0495680_0004916_3342_3986 212
135 3300047444 Ga0495675_0031613 Ga0495675_0031613_1523_2167 212
136 3300049568 Ga0501031_0024948 Ga0501031_0024948_1399_2055 212
137 3300049569 Ga0501032_0023846 Ga0501032_0023846_1878_2534 212
138 3300049570 Ga0501033_0025859 Ga0501033_0025859_1368_2024 212
139 3300049571 Ga0501034_0032202 Ga0501034_0032202_1460_2116 212
140 3300049572 Ga0501036_0001755 Ga0501036_0001755_15381_16037 212
141 3300049573 Ga0501037_0008352 Ga0501037_0008352_980_1636 212
142 3300049574 Ga0501038_0004814 Ga0501038_0004814_1777_2433 212
143 3300049575 Ga0501039_0021582 Ga0501039_0021582_1386_2042 212
144 3300049576 Ga0501040_0355916 Ga0501040_0355916_159_815 212
145 3300049578 Ga0501042_0025059 Ga0501042_0025059_1533_2189 212
146 3300049579 Ga0501043_0050626 Ga0501043_0050626_439_1095 212
147 3300049580 Ga0501046_0048004 Ga0501046_0048004_1182_1838 212
148 3300049581 Ga0501047_0146640 Ga0501047_0146640_800_1456 212
149 3300049582 Ga0501048_0050279 Ga0501048_0050279_917_1573 212
150 3300049583 Ga0501067_0002372 Ga0501067_0002372_3787_4443 212
151 3300049584 Ga0501068_0015240 Ga0501068_0015240_3363_4019 212
152 3300049586 Ga0501070_0084103 Ga0501070_0084103_980_1636 212
153 3300049589 Ga0501073_0101243 Ga0501073_0101243_122_778 212
154 3300049590 Ga0501074_0005703 Ga0501074_0005703_6238_6894 212
155 3300049741 Ga0501079_0023738 Ga0501079_0023738_4031_4687 212
156 3300049742 Ga0501080_0019376 Ga0501080_0019376_5527_6183 212
157 3300049744 Ga0501083_0036993 Ga0501083_0036993_894_1550 212
158 3300049822 Ga0501035_0059066 Ga0501035_0059066_1397_2053 212
159 3300049823 Ga0501044_0036317 Ga0501044_0036317_2104_2760 212
160 3300049824 Ga0501045_0039792 Ga0501045_0039792_1239_1895 212
161 3300054114 Ga0501084_0046533 Ga0501084_0046533_2072_2728 212
162 3300060353 Ga0501082_0007959 Ga0501082_0007959_1769_2425 212
163 iso_pu_bacteria 2842482326 2842485722 212
164 3300006163 Ga0070715_10271804 Ga0070715_102718041 213
165 3300006173 Ga0070716_100019706 Ga0070716_1000197063 213
166 3300009093 Ga0105240_10000685 Ga0105240_100006853 213
167 3300009093 Ga0105240_10157086 Ga0105240_101570864 213
168 3300009551 Ga0105238_10095427 Ga0105238_100954273 213
169 3300010375 Ga0105239_10401834 Ga0105239_104018342 213
170 3300025261 Ga0209233_1003415 Ga0209233_10034155 213
171 3300025913 Ga0207695_10000007 Ga0207695_10000007385 213
172 3300025913 Ga0207695_10495055 Ga0207695_104950552 213
173 3300025914 Ga0207671_10024168 Ga0207671_100241683 213
174 3300025921 Ga0207652_10170241 Ga0207652_101702413 213
175 3300025939 Ga0207665_10121877 Ga0207665_101218772 213
176 3300025961 Ga0207712_10249605 Ga0207712_102496052 213
177 3300028381 Ga0268264_10650989 Ga0268264_106509892 213
178 3300037471 Ga0395905_0035148 Ga0395905_0035148_2400_3041 213
179 3300050513 nmdc:mga0rr50_265575_c1 nmdc:mga0rr50_265575_c1_346_987 213
180 3300003316 rootH1_10080614 rootH1_100806142 214
181 3300003322 rootL2_10137193 rootL2_101371932 214
182 3300003323 rootH1_10085478 rootH1_100854782 214
183 3300005437 Ga0070710_10504455 Ga0070710_105044551 214
184 3300005439 Ga0070711_100156724 Ga0070711_1001567242 214
185 3300005445 Ga0070708_100024887 Ga0070708_1000248872 214
186 3300005467 Ga0070706_100402332 Ga0070706_1004023321 214
187 3300005536 Ga0070697_100399467 Ga0070697_1003994672 214
188 3300006173 Ga0070716_100152685 Ga0070716_1001526853 214
189 3300006175 Ga0070712_100005186 Ga0070712_1000051867 214
190 3300006844 Ga0075428_100326834 Ga0075428_1003268342 214
191 3300006846 Ga0075430_100040705 Ga0075430_1000407053 214
192 3300006846 Ga0075430_100061899 Ga0075430_1000618993 214
193 3300006846 Ga0075430_100360415 Ga0075430_1003604152 214
194 3300006847 Ga0075431_100078884 Ga0075431_1000788842 214
195 3300006847 Ga0075431_100177499 Ga0075431_1001774993 214
196 3300006880 Ga0075429_100134990 Ga0075429_1001349903 214
197 3300025910 Ga0207684_10140333 Ga0207684_101403331 214
198 3300025915 Ga0207693_10010063 Ga0207693_100100637 214
199 3300025916 Ga0207663_10537264 Ga0207663_105372641 214
200 3300025922 Ga0207646_10389681 Ga0207646_103896812 214
201 3300025928 Ga0207700_10155585 Ga0207700_101555852 214
202 3300027671 Ga0209588_1021586 Ga0209588_10215862 214
203 3300046499 Ga0495594_0375500 Ga0495594_0375500_93_770 214
204 3300050508 nmdc:mga09592_129122_c1 nmdc:mga09592_129122_c1_1158_1802 214
205 3300050509 nmdc:mga0qj67_14367_c1 nmdc:mga0qj67_14367_c1_3630_4274 214
206 3300050509 nmdc:mga0qj67_524816_c1 nmdc:mga0qj67_524816_c1_251_895 214
207 3300050510 nmdc:mga06r32_32819_c1 nmdc:mga06r32_32819_c1_502_1146 214
208 3300050514 nmdc:mga08x19_86750_c1 nmdc:mga08x19_86750_c1_893_1624 214
209 3300005436 Ga0070713_100361931 Ga0070713_1003619312 215
210 3300005439 Ga0070711_100238922 Ga0070711_1002389221 215
211 3300005445 Ga0070708_100011597 Ga0070708_1000115974 215
212 3300005471 Ga0070698_100037251 Ga0070698_1000372512 215
213 3300005536 Ga0070697_100158282 Ga0070697_1001582822 215
214 3300006028 Ga0070717_10424181 Ga0070717_104241812 215
215 3300006175 Ga0070712_100070130 Ga0070712_1000701304 215
216 3300006237 Ga0097621_100537370 Ga0097621_1005373701 215
217 3300007076 Ga0075435_100845021 Ga0075435_1008450211 215
218 3300013296 Ga0157374_10350909 Ga0157374_103509092 215
219 3300014969 Ga0157376_10003549 Ga0157376_100035498 215
220 3300025900 Ga0207710_10098023 Ga0207710_100980232 215
221 3300025906 Ga0207699_10767200 Ga0207699_107672001 215
222 3300025915 Ga0207693_10142338 Ga0207693_101423381 215
223 3300025916 Ga0207663_10140239 Ga0207663_101402391 215
224 3300025929 Ga0207664_10802416 Ga0207664_108024161 215
225 3300025942 Ga0207689_10209106 Ga0207689_102091061 215
226 3300046472 Ga0495580_0319948 Ga0495580_0319948_281_1012 215
227 3300048917 Ga0496114_0303781 Ga0496114_0303781_566_1213 215
228 3300048918 Ga0496115_0039674 Ga0496115_0039674_2993_3640 215
229 3300050513 nmdc:mga0rr50_709629_c1 nmdc:mga0rr50_709629_c1_86_754 215
230 3300003214 JGI25165J46597_1000672 JGI25165J46597_100067222 216
231 3300005329 Ga0070683_100019062 Ga0070683_1000190624 216
232 3300005336 Ga0070680_100144369 Ga0070680_1001443692 216
233 3300005337 Ga0070682_100055220 Ga0070682_1000552203 216
234 3300005341 Ga0070691_10300760 Ga0070691_103007601 216
235 3300005344 Ga0070661_100116613 Ga0070661_1001166133 216
236 3300005435 Ga0070714_100670471 Ga0070714_1006704712 216
237 3300005436 Ga0070713_100054962 Ga0070713_1000549624 216
238 3300005535 Ga0070684_100060276 Ga0070684_1000602763 216
239 3300005539 Ga0068853_100493083 Ga0068853_1004930832 216
240 3300005546 Ga0070696_100125704 Ga0070696_1001257042 216
241 3300005548 Ga0070665_100849331 Ga0070665_1008493312 216
242 3300005578 Ga0068854_100107350 Ga0068854_1001073504 216
243 3300005834 Ga0068851_10085671 Ga0068851_100856713 216
244 3300006237 Ga0097621_100010830 Ga0097621_1000108302 216
245 3300006358 Ga0068871_100017153 Ga0068871_1000171534 216
246 3300009176 Ga0105242_10678933 Ga0105242_106789332 216
247 3300013100 Ga0157373_10067329 Ga0157373_100673293 216
248 3300013105 Ga0157369_10494072 Ga0157369_104940722 216
249 3300025231 Ga0207427_104103 Ga0207427_1041032 216
250 3300025233 Ga0209437_100023 Ga0209437_100023333 216
251 3300025261 Ga0209233_1000062 Ga0209233_1000062142 216
252 3300025913 Ga0207695_10017916 Ga0207695_100179167 216
253 3300025917 Ga0207660_10260086 Ga0207660_102600862 216
254 3300025920 Ga0207649_10048608 Ga0207649_100486082 216
255 3300025928 Ga0207700_10152836 Ga0207700_101528363 216
256 3300025944 Ga0207661_10027971 Ga0207661_100279716 216
257 3300025981 Ga0207640_10102724 Ga0207640_101027242 216
258 3300026041 Ga0207639_10503876 Ga0207639_105038762 216
259 3300026078 Ga0207702_10634922 Ga0207702_106349221 216
260 3300026078 Ga0207702_10800487 Ga0207702_108004872 216
261 3300028786 Ga0307517_10242175 Ga0307517_102421751 216
262 3300037466 Ga0395898_0576886 Ga0395898_0576886_199_849 216
263 3300037471 Ga0395905_0079067 Ga0395905_0079067_1143_1793 216
264 3300048904 Ga0496101_0000225 Ga0496101_0000225_29644_30309 216
265 3300048905 Ga0496102_0701149 Ga0496102_0701149_146_811 216
266 3300048907 Ga0496104_0097553 Ga0496104_0097553_33_698 216
267 3300048916 Ga0496113_0325837 Ga0496113_0325837_381_1052 216
268 3300048917 Ga0496114_0000508 Ga0496114_0000508_17328_17993 216
269 3300002741 JGI25157J39369_1000556 JGI25157J39369_10005563 217
270 3300005338 Ga0068868_100018542 Ga0068868_1000185425 217
271 3300005367 Ga0070667_100334759 Ga0070667_1003347593 217
272 3300005367 Ga0070667_100471962 Ga0070667_1004719621 217
273 3300005434 Ga0070709_10064586 Ga0070709_100645863 217
274 3300005435 Ga0070714_100832098 Ga0070714_1008320981 217
275 3300005436 Ga0070713_100001236 Ga0070713_1000012363 217
276 3300005436 Ga0070713_100251906 Ga0070713_1002519062 217
277 3300005436 Ga0070713_100279828 Ga0070713_1002798282 217
278 3300005457 Ga0070662_100295723 Ga0070662_1002957232 217
279 3300005530 Ga0070679_100352887 Ga0070679_1003528872 217
280 3300005539 Ga0068853_100258558 Ga0068853_1002585583 217
281 3300005563 Ga0068855_100051483 Ga0068855_1000514832 217
282 3300005614 Ga0068856_100145602 Ga0068856_1001456023 217
283 3300005616 Ga0068852_100065535 Ga0068852_1000655354 217
284 3300005616 Ga0068852_100533062 Ga0068852_1005330622 217
285 3300005841 Ga0068863_100037070 Ga0068863_1000370704 217
286 3300005842 Ga0068858_100002763 Ga0068858_10000276313 217
287 3300005843 Ga0068860_100110653 Ga0068860_1001106532 217
288 3300005844 Ga0068862_100168260 Ga0068862_1001682601 217
289 3300006028 Ga0070717_10782808 Ga0070717_107828082 217
290 3300006173 Ga0070716_100018190 Ga0070716_1000181902 217
291 3300009093 Ga0105240_10162978 Ga0105240_101629783 217
292 3300009093 Ga0105240_10166278 Ga0105240_101662783 217
293 3300009101 Ga0105247_10076003 Ga0105247_100760032 217
294 3300009545 Ga0105237_10074726 Ga0105237_100747264 217
295 3300009551 Ga0105238_10058626 Ga0105238_100586262 217
296 3300013104 Ga0157370_10090765 Ga0157370_100907654 217
297 3300013105 Ga0157369_10076976 Ga0157369_100769764 217
298 3300013297 Ga0157378_10491867 Ga0157378_104918671 217
299 3300013306 Ga0163162_10050896 Ga0163162_100508965 217
300 3300013306 Ga0163162_10163363 Ga0163162_101633633 217
301 3300013308 Ga0157375_10039138 Ga0157375_100391386 217
302 3300021361 Ga0213872_10102304 Ga0213872_101023042 217
303 3300025226 Ga0209674_100984 Ga0209674_1009846 217
304 3300025250 Ga0209026_1000017 Ga0209026_1000017259 217
305 3300025256 Ga0209759_1006403 Ga0209759_10064032 217
306 3300025321 Ga0207656_10037732 Ga0207656_100377322 217
307 3300025900 Ga0207710_10202394 Ga0207710_102023941 217
308 3300025904 Ga0207647_10115136 Ga0207647_101151361 217
309 3300025906 Ga0207699_10006794 Ga0207699_100067945 217
310 3300025912 Ga0207707_10301198 Ga0207707_103011982 217
311 3300025913 Ga0207695_10156932 Ga0207695_101569323 217
312 3300025913 Ga0207695_10178947 Ga0207695_101789473 217
313 3300025913 Ga0207695_10221303 Ga0207695_102213032 217
314 3300025914 Ga0207671_10068937 Ga0207671_100689372 217
315 3300025917 Ga0207660_10478931 Ga0207660_104789311 217
316 3300025928 Ga0207700_10004249 Ga0207700_100042495 217
317 3300025928 Ga0207700_10370378 Ga0207700_103703781 217
318 3300025929 Ga0207664_10004402 Ga0207664_100044027 217
319 3300025939 Ga0207665_10025695 Ga0207665_100256955 217
320 3300025942 Ga0207689_10003989 Ga0207689_1000398913 217
321 3300025949 Ga0207667_10000429 Ga0207667_1000042953 217
322 3300025949 Ga0207667_10654290 Ga0207667_106542901 217
323 3300026023 Ga0207677_10066241 Ga0207677_100662412 217
324 3300026078 Ga0207702_10173673 Ga0207702_101736733 217
325 3300026088 Ga0207641_10026547 Ga0207641_100265471 217
326 3300026142 Ga0207698_10501275 Ga0207698_105012751 217
327 3300028380 Ga0268265_10079789 Ga0268265_100797892 217
328 3300028381 Ga0268264_10101390 Ga0268264_101013902 217
329 3300035170 Ga0373943_0045695 Ga0373943_0045695_281_934 217
330 3300035695 Ga0373927_0048671 Ga0373927_0048671_944_1597 217
331 3300035725 Ga0373947_0153183 Ga0373947_0153183_192_845 217
332 3300037466 Ga0395898_0148776 Ga0395898_0148776_599_1267 217
333 3300037471 Ga0395905_0160675 Ga0395905_0160675_1287_1955 217
334 3300038443 Ga0395901_0015978 Ga0395901_0015978_168_836 217
335 3300039447 Ga0436361_0722545 Ga0436361_0722545_875_1612 217
336 3300039453 Ga0436362_0809161 Ga0436362_0809161_106_816 217
337 3300046455 Ga0495603_0110432 Ga0495603_0110432_16_669 217
338 3300046472 Ga0495580_0101769 Ga0495580_0101769_1168_1821 217
339 3300046683 Ga0495658_0411247 Ga0495658_0411247_23_676 217
340 3300047315 Ga0495581_0066110 Ga0495581_0066110_1088_1741 217
341 3300047321 Ga0495676_0183888 Ga0495676_0183888_348_1001 217
342 3300048914 Ga0496111_0627956 Ga0496111_0627956_106_762 217

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

50

96

0.98

PF14246

TetR_C_7

AefR-like transcriptional repressor, C-terminal domain

121

236

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
6g8g-assembly1.cif.gz_A flavonoid-responsive regulator frra in complex with genistein 0.8393 17 210
3c2b-assembly1.cif.gz_B crystal structure of tetr transcriptional regulator from agrobacterium tumefaciens 0.8352 20 216
6g8g-assembly1.cif.gz_A flavonoid-responsive regulator frra in complex with genistein 0.8239 17 210
3cwr-assembly3.cif.gz_B crystal structure of transcriptional regulator of tetr family (yp_425770.1) from rhodospirillum rubrum atcc 11170 at 1.50 a resolution 0.8128 17 205
3c2b-assembly1.cif.gz_B crystal structure of tetr transcriptional regulator from agrobacterium tumefaciens 0.8115 20 216
ID Description Score Start End Superfamily
3mvpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9762 15 58 1.10.10.60
2of7A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9729 12 58 1.10.10.60
2wv1B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9661 17 61 1.10.10.60
4xk4B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9656 18 68 1.10.10.60
4xk4D01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9654 18 68 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7I8BUF0-F1-model_v4 TetR family transcriptional regulator 0.9713 1 210 GO:0000976
GO:0003700
AF-A0A7I8BUF0-F1-model_v4 TetR family transcriptional regulator 0.9577 1 210 GO:0000976
GO:0003700
AF-A0A7C3KWE1-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9524 7 213 GO:0000976
GO:0003700
AF-A0A0P6WAX2-F1-model_v4 HTH tetR-type domain-containing protein 0.9232 19 207 GO:0000976
GO:0003700
AF-A0A4Q0QWV9-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9197 7 212 GO:0000976
GO:0003700

Feature Viewer

pLDDT pTM Quality
89.7 0.81 High
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Predicted Structure (AlphaFold2)

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