F414963

General Info

Members Datasets Scaffolds Average Seq Length
341 244 682 380

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2811994879|2812357636
Length 453
Sequence ATGDAGGTTGDPARATDDAGQVKDAANQVTRAVGRATGAVDEETDAVDDVTDAVGTATGAADEMTGAVDEVTGAVGQSDVGAGDGTRAVRAGLPDPVKHEPTLPGPVFAAHFHLPGEPTGPYTYGRDENPTWTLLERAVGELEAPGQDGAETLVFASGMAAISAVLFSQLRTGDMCVLPDDGYQALPLVRAQLEAYGIEVRTAPTGGDAQLDVLDGARLLWIETPSNPGLDVCDIRRLAEAAHARGALVAVDNTLATPLGQRPLELGADFAVASGTKQLTGHGDVLLGYVVGRNAEAMAAVRRWRKIVGAIPGPMEAWLAHRSIATLQMRVDRQSATALAVAEALRERPEVTGLRYPGLPDDPSHEIAARQMRRFGCVVSFTLPTRERADRFLDALRLVDDATSFGGVRSTAERRGRWGGDAVPEGFIRLSVGAEDPEDLVADVLRALDASGA

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
16 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
17 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
24 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
25 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
26 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
37 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
38 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
39 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
42 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
43 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
44 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
45 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
46 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
47 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
50 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
51 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
52 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
53 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
54 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
55 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
56 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
57 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
58 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
59 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
60 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
61 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
62 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
63 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
64 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
65 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
66 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
67 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
68 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
69 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
70 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
71 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
72 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
73 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
74 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
75 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
76 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
77 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
78 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
79 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
80 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
81 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
82 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
85 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
86 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
87 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
88 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
89 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
90 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
91 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
94 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
95 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
96 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
97 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
98 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
99 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
100 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
101 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
109 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
110 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
111 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
112 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
113 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
114 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
115 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
116 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
117 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
118 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
119 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
120 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
121 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
122 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
123 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
126 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
127 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
128 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
129 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
130 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
131 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
132 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
133 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
134 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
135 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
136 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
137 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
138 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
159 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
160 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
161 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
162 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
163 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
164 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
165 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
166 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
167 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
168 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
169 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
170 2643221647 Streptomyces sp. Root369 Isolate Unclassified
171 2643221670 Streptomyces sp. Root431 Isolate Unclassified
172 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
173 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
174 2643221714 Streptomyces sp. Root264 Isolate Unclassified
175 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
176 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
177 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
178 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
179 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
180 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
181 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
182 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
183 2808606448 Streptomyces sp. 193411 Isolate Unclassified
184 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
185 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
186 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
187 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
188 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
189 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
190 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
191 2862574272 Streptomyces sp. AcE210 Isolate Nodule
192 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
193 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
194 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
195 2867428634 Streptomyces sp. RP5T Isolate Unclassified
196 2867475112 Streptomyces sp. TM32 Isolate Unclassified
197 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
198 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
199 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
200 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
201 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
202 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
203 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
204 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
205 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
206 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
207 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
208 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
209 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
210 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
211 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
212 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
213 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
214 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
215 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
216 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
217 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
218 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
219 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
220 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
221 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
222 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
223 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
224 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
225 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
226 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
227 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
228 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
229 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
230 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
231 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
232 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
233 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
234 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
235 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
236 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
237 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
238 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
239 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
240 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
241 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
242 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
243 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
244 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.66
Metatranscriptomes 0.29
Isolates 24.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.23
Nodule 1.17
Rhizoplane 4.4
Rhizosphere 71.55
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10004358 3300001989 Bacteria 5421
2 JGI24737J22298_10030730 3300001990 Bacteria 1679
3 JGI24735J21928_10029870 3300002067 Bacteria 1621
4 rootH1_10001932 3300003323 Bacteria 7615
5 Ga0006562J51391_1133504 3300003578 Bacteria 2970
6 Ga0070683_100154228 3300005329 Bacteria 2178
7 Ga0070682_100012454 3300005337 Bacteria 4879
8 Ga0070682_100036115 3300005337 Bacteria 3020
9 Ga0070682_100209569 3300005337 Bacteria 1380
10 Ga0068868_100386921 3300005338 Bacteria 1204
11 Ga0070661_100188738 3300005344 Bacteria 1571
12 Ga0070714_100022482 3300005435 Bacteria 5171
13 Ga0070684_100116657 3300005535 Bacteria 2398
14 Ga0070672_100139961 3300005543 Bacteria 1995
15 Ga0081455_10057385 3300005937 Bacteria 3300
16 Ga0075363_100000647 3300006048 Bacteria 11554
17 Ga0075367_10000477 3300006178 Bacteria 14983
18 Ga0099826_10064850 3300006948 Bacteria 2351
19 Ga0105245_10019221 3300009098 Bacteria 5982
20 Ga0105245_10075208 3300009098 Bacteria 3075
21 Ga0105245_10170771 3300009098 Bacteria 2071
22 Ga0105243_10017323 3300009148 Bacteria 5447
23 Ga0105242_10082505 3300009176 Bacteria 2690
24 Ga0105248_10091565 3300009177 Bacteria 3424
25 Ga0105238_10285496 3300009551 Bacteria 1632
26 Ga0105246_10000301 3300011119 Bacteria 26083
27 Ga0105246_10198848 3300011119 Bacteria 1557
28 Ga0105246_10245006 3300011119 Bacteria 1419
29 Ga0182007_10001310 3300015262 Bacteria 13457
30 Ga0183367_1008 3300015688 Bacteria 490626
31 Ga0207426_1001179 3300025302 Bacteria 23362
32 Ga0207426_1002340 3300025302 Bacteria 12377
33 Ga0207426_1040323 3300025302 Bacteria 1455
34 Ga0207696_1014495 3300025711 Bacteria 2701
35 Ga0207647_10045920 3300025904 Bacteria 2723
36 Ga0207687_10145581 3300025927 Bacteria 1802
37 Ga0207664_10042789 3300025929 Bacteria 3538
38 Ga0207644_10182477 3300025931 Bacteria 1646
39 Ga0207691_10093185 3300025940 Bacteria 2698
40 Ga0207639_10095189 3300026041 Bacteria 2393
41 Ga0207678_10006636 3300026067 Bacteria 10259
42 Ga0207678_10140273 3300026067 Bacteria 2063
43 Ga0209371_1008285 3300027312 Bacteria 3480
44 Ga0268266_10340292 3300028379 Bacteria 1408
45 Ga0307515_10102156 3300028794 Bacteria 3452
46 Ga0307515_10104885 3300028794 Bacteria 3371
47 Ga0268256_1003874 3300030500 Bacteria 6512
48 Ga0307511_10000329 3300030521 Bacteria 50299
49 Ga0307512_10004248 3300030522 Bacteria 15835
50 Ga0307512_10145252 3300030522 Bacteria 1437
51 Ga0307513_10001562 3300031456 Bacteria 32853
52 Ga0307513_10050940 3300031456 Bacteria 4471
53 Ga0307509_10009843 3300031507 Bacteria 11832
54 Ga0307509_10219175 3300031507 Bacteria 1718
55 Ga0307508_10003864 3300031616 Bacteria 14909
56 Ga0307508_10022395 3300031616 Bacteria 5743
57 Ga0307508_10023874 3300031616 Bacteria 5550
58 Ga0307508_10086481 3300031616 Bacteria 2718
59 Ga0307514_10092832 3300031649 Bacteria 2194
60 Ga0307514_10188114 3300031649 Bacteria 1319
61 Ga0307516_10005023 3300031730 Bacteria 16020
62 Ga0307516_10090898 3300031730 Bacteria 2881
63 Ga0307516_10178471 3300031730 Bacteria 1859
64 Ga0307518_10122090 3300031838 Bacteria 1842
65 Ga0307518_10194538 3300031838 Bacteria 1355
66 Ga0307507_10011318 3300033179 Bacteria 11290
67 Ga0307507_10013995 3300033179 Bacteria 9638
68 Ga0307510_10009997 3300033180 Bacteria 11274
69 Ga0307510_10047304 3300033180 Bacteria 4612
70 Ga0307510_10057435 3300033180 Bacteria 4039
71 Ga0307510_10185839 3300033180 Bacteria 1633
72 Ga0395898_0005372 3300037466 Bacteria 13848
73 Ga0395898_0010354 3300037466 Bacteria 9753
74 Ga0436364_0796641 3300037853 Bacteria 22493
75 Ga0395901_0017972 3300038443 Bacteria 7217
76 Ga0436363_0840879 3300039450 Bacteria 2476
77 Ga0439436_0000353 3300041404 Bacteria 11381
78 Ga0439436_0011776 3300041404 Bacteria 2654
79 Ga0439439_0002365 3300041406 Bacteria 3995
80 Ga0439439_0018373 3300041406 Bacteria 1726
81 Ga0439465_0015857 3300041413 Bacteria 2350
82 Ga0451853_0314754 3300041512 Bacteria 1830
83 Ga0451853_0610575 3300041512 Bacteria 2386
84 Ga0451853_1296431 3300041512 Bacteria 3106
85 Ga0451853_3472216 3300041512 Bacteria 1469
86 Ga0439433_0001489 3300041999 Bacteria 4834
87 Ga0439448_0004266 3300042005 Bacteria 4031
88 Ga0439449_0008421 3300042007 Bacteria 3919
89 Ga0439449_0029282 3300042007 Bacteria 2052
90 Ga0439455_0001021 3300042012 Bacteria 4411
91 Ga0439457_000052 3300042014 Bacteria 24278
92 Ga0439457_001432 3300042014 Bacteria 7181
93 Ga0450894_000007 3300042131 Bacteria 27540
94 Ga0450903_000241 3300042138 Bacteria 12192
95 Ga0439434_0004205 3300042435 Bacteria 4203
96 Ga0466972_0001531 3300044658 Bacteria 11270
97 Ga0466972_0003711 3300044658 Bacteria 7598
98 Ga0466965_0000511 3300044683 Bacteria 13810
99 Ga0466966_0008614 3300044684 Bacteria 6752
100 Ga0466961_0000939 3300044693 Bacteria 18028
101 Ga0466961_0003685 3300044693 Bacteria 9561
102 Ga0466964_0003258 3300044706 Bacteria 5907
103 Ga0466971_0004269 3300044719 Bacteria 6161
104 Ga0466968_0001222 3300044735 Bacteria 9090
105 Ga0466970_0000723 3300044765 Bacteria 16143
106 Ga0466970_0076765 3300044765 Bacteria 1800
107 Ga0466957_0000165 3300044842 Bacteria 29339
108 Ga0466960_0003998 3300044901 Bacteria 5732
109 Ga0466959_0009918 3300045049 Bacteria 6789
110 Ga0466958_0000098 3300045836 Bacteria 27382
111 Ga0466967_0016816 3300045976 Bacteria 5782
112 Ga0495592_0009168 3300046454 Bacteria 7447
113 Ga0495592_0015789 3300046454 Bacteria 5729
114 Ga0495603_0000397 3300046455 Bacteria 23889
115 Ga0495603_0016832 3300046455 Bacteria 4423
116 Ga0495590_0012527 3300046457 Bacteria 3146
117 Ga0495629_0006220 3300046459 Bacteria 8860
118 Ga0495629_0074139 3300046459 Bacteria 2376
119 Ga0495629_0135964 3300046459 Bacteria 1711
120 Ga0495629_0235157 3300046459 Bacteria 1262
121 Ga0495638_0057915 3300046460 Bacteria 2402
122 Ga0495641_0021422 3300046461 Bacteria 3253
123 Ga0495651_0019669 3300046462 Bacteria 5234
124 Ga0495651_0038038 3300046462 Bacteria 3747
125 Ga0495582_0111599 3300046473 Bacteria 1536
126 Ga0495582_0122237 3300046473 Bacteria 1467
127 Ga0495582_0184775 3300046473 Bacteria 1188
128 Ga0495639_0073677 3300046475 Bacteria 1581
129 Ga0495662_0001388 3300046476 Bacteria 12004
130 Ga0495662_0007710 3300046476 Bacteria 5300
131 Ga0495664_0076475 3300046477 Bacteria 2003
132 Ga0495594_0034736 3300046499 Bacteria 2744
133 Ga0495596_0009299 3300046500 Bacteria 4327
134 Ga0495607_0015362 3300046501 Bacteria 4965
135 Ga0495583_0022505 3300046506 Bacteria 3213
136 Ga0495606_0005611 3300046507 Bacteria 11927
137 Ga0495618_0130894 3300046514 Bacteria 1605
138 Ga0495620_0002474 3300046515 Bacteria 10711
139 Ga0495630_0037382 3300046517 Bacteria 3630
140 Ga0495630_0107050 3300046517 Bacteria 2118
141 Ga0495632_0047246 3300046519 Bacteria 2136
142 Ga0495648_0045129 3300046524 Bacteria 2744
143 Ga0495666_0074848 3300046526 Bacteria 1605
144 Ga0495652_0005385 3300046529 Bacteria 12060
145 Ga0495654_0030817 3300046530 Bacteria 2726
146 Ga0495587_0003421 3300046536 Bacteria 10585
147 Ga0495587_0034969 3300046536 Bacteria 3028
148 Ga0495622_0038924 3300046557 Bacteria 2213
149 Ga0495622_0096438 3300046557 Bacteria 1357
150 Ga0495668_0025534 3300046616 Bacteria 3356
151 Ga0495668_0030807 3300046616 Bacteria 3025
152 Ga0495634_0002809 3300046642 Bacteria 14306
153 Ga0495611_0012535 3300046648 Bacteria 3604
154 Ga0495625_0007788 3300046660 Bacteria 9245
155 Ga0495625_0052591 3300046660 Bacteria 2916
156 Ga0495635_0005445 3300046663 Bacteria 8853
157 Ga0495635_0080348 3300046663 Bacteria 2231
158 Ga0495661_0066688 3300046665 Bacteria 2117
159 Ga0495588_0005175 3300046674 Bacteria 5795
160 Ga0495588_0013867 3300046674 Bacteria 3847
161 Ga0495588_0104761 3300046674 Bacteria 1488
162 Ga0495657_0001872 3300046675 Bacteria 17916
163 Ga0495657_0003851 3300046675 Bacteria 12100
164 Ga0495658_0025555 3300046683 Bacteria 3157
165 Ga0495613_0001140 3300046689 Bacteria 20239
166 Ga0495613_0017607 3300046689 Bacteria 5320
167 Ga0495613_0036051 3300046689 Bacteria 3667
168 Ga0495613_0060558 3300046689 Bacteria 2772
169 Ga0495624_0038803 3300046690 Bacteria 3057
170 Ga0495671_0018903 3300046692 Bacteria 3650
171 Ga0495671_0068310 3300046692 Bacteria 1747
172 Ga0495649_0004931 3300046694 Bacteria 8606
173 Ga0495649_0131479 3300046694 Bacteria 1320
174 Ga0495589_0008335 3300046794 Bacteria 5415
175 Ga0495589_0016386 3300046794 Bacteria 3810
176 Ga0495589_0030826 3300046794 Bacteria 2700
177 Ga0495600_0114842 3300046809 Bacteria 1753
178 Ga0495600_0135754 3300046809 Bacteria 1598
179 Ga0495581_0001829 3300047315 Bacteria 11913
180 Ga0495581_0005490 3300047315 Bacteria 7340
181 Ga0495581_0156647 3300047315 Bacteria 1331
182 Ga0495604_0003973 3300047317 Bacteria 11765
183 Ga0495604_0030095 3300047317 Bacteria 4315
184 Ga0495636_0029361 3300047318 Bacteria 2244
185 Ga0495674_0061546 3300047319 Bacteria 3271
186 Ga0495676_0011291 3300047321 Bacteria 8070
187 Ga0495676_0029079 3300047321 Bacteria 4708
188 Ga0495680_0008925 3300047322 Bacteria 9061
189 Ga0495687_002121 3300047443 Bacteria 16604
190 Ga0495687_002277 3300047443 Bacteria 15727
191 Ga0495687_013229 3300047443 Bacteria 4318
192 Ga0495687_039125 3300047443 Bacteria 2100
193 Ga0495675_0003276 3300047444 Bacteria 9735
194 Ga0495675_0083381 3300047444 Bacteria 2012
195 Ga0495685_001906 3300047447 Bacteria 6442
196 Ga0495685_001952 3300047447 Bacteria 6392
197 Ga0495685_021440 3300047447 Bacteria 2222
198 Ga0495681_0002640 3300047470 Bacteria 12722
199 Ga0495593_0015043 3300047673 Bacteria 4395
200 Ga0495593_0016795 3300047673 Bacteria 4122
201 Ga0495602_0227272 3300048088 Bacteria 1404
202 Ga0495614_0011242 3300048089 Bacteria 3938
203 Ga0495614_0014746 3300048089 Bacteria 3418
204 Ga0495626_0006802 3300048091 Bacteria 6463
205 Ga0496101_0047807 3300048904 Bacteria 3073
206 Ga0496101_0334990 3300048904 Bacteria 1188
207 Ga0496108_0006239 3300048911 Bacteria 9651
208 Ga0496108_0027618 3300048911 Bacteria 4690
209 Ga0496108_0142496 3300048911 Bacteria 2065
210 Ga0496109_0017010 3300048912 Bacteria 6365
211 Ga0496109_0047123 3300048912 Bacteria 3918
212 Ga0496110_0043171 3300048913 Bacteria 3937
213 Ga0496110_0065122 3300048913 Bacteria 3222
214 Ga0496112_0001718 3300048915 Bacteria 17115
215 Ga0496112_0069976 3300048915 Bacteria 3467
216 Ga0496113_0023195 3300048916 Bacteria 4400
217 Ga0496114_0097801 3300048917 Bacteria 2501
218 Ga0496114_0116680 3300048917 Bacteria 2292
219 Ga0496126_0051856 3300048929 Bacteria 3733
220 Ga0501033_0002140 3300049570 Bacteria 17092
221 Ga0501033_0036313 3300049570 Bacteria 3692
222 Ga0501034_0003595 3300049571 Bacteria 17603
223 Ga0501034_0035975 3300049571 Bacteria 5020
224 Ga0501036_0001328 3300049572 Bacteria 18982
225 Ga0501036_0003205 3300049572 Bacteria 13057
226 Ga0501037_0010613 3300049573 Bacteria 6767
227 Ga0501037_0086863 3300049573 Bacteria 2264
228 Ga0501038_0005293 3300049574 Bacteria 11997
229 Ga0501038_0093525 3300049574 Bacteria 2515
230 Ga0501038_0147780 3300049574 Bacteria 1918
231 Ga0501039_0016899 3300049575 Bacteria 5593
232 Ga0501039_0352203 3300049575 Bacteria 1157
233 Ga0501043_0003883 3300049579 Bacteria 12270
234 Ga0501043_0004711 3300049579 Bacteria 11058
235 Ga0501043_0156383 3300049579 Bacteria 1783
236 Ga0501046_0179569 3300049580 Bacteria 1583
237 Ga0501047_0030207 3300049581 Bacteria 5225
238 Ga0501047_0047730 3300049581 Bacteria 4136
239 Ga0501047_0129044 3300049581 Bacteria 2408
240 Ga0501048_0005930 3300049582 Bacteria 9297
241 Ga0501074_0026059 3300049590 Bacteria 4240
242 Ga0501257_021597 3300049686 Bacteria 1519
243 Ga0501080_0059716 3300049742 Bacteria 3549
244 Ga0501035_0003497 3300049822 Bacteria 15014
245 Ga0501035_0088478 3300049822 Bacteria 2729
246 Ga0501044_0001603 3300049823 Bacteria 26463
247 Ga0501044_0003731 3300049823 Bacteria 17108
248 Ga0501044_0010232 3300049823 Bacteria 10185
249 Ga0501044_0061757 3300049823 Bacteria 3832
250 Ga0501045_0122236 3300049824 Bacteria 1933
251 nmdc:mga03n38_17658_c1 3300050490 Bacteria 2799
252 nmdc:mga06z11_3304_c1 3300050494 Bacteria 6240
253 Ga0495619_0138938 3300053085 Bacteria 1672
254 Ga0500640_001269 3300053095 Bacteria 7497
255 Ga0500553_053928 3300053101 Bacteria 1917
256 Ga0500560_007253 3300053107 Bacteria 2598
257 Ga0500572_001385 3300053111 Bacteria 6683
258 Ga0466962_0000132 3300061719 Bacteria 30670
259 Ga0466962_0038082 3300061719 Bacteria 2303
260 2812357636 2811994879 Bacteria 9313447
261 2547406075 2547132111 Bacteria 8013147
262 2554257534 2554235005 Bacteria 6457341
263 2585310851 2582581313 Bacteria 10042643
264 2616700344 2616644814 Bacteria 11555299
265 2616702160 2616644814 Bacteria 11555299
266 2643947896 2643221587 Bacteria 7586415
267 2644262891 2643221647 Bacteria 10741251
268 2644390666 2643221670 Bacteria 6497041
269 2644433762 2643221677 Bacteria 7584031
270 2644443098 2643221678 Bacteria 9540101
271 2644627094 2643221714 Bacteria 9015452
272 2784589018 2784132148 Bacteria 8627943
273 2785342831 2784746763 Bacteria 9783172
274 2785369972 2784746768 Bacteria 10036182
275 2786671043 2786546132 Bacteria 10419719
276 2793979132 2791355406 Bacteria 11364898
277 2804846368 2802429296 Bacteria 7227771
278 2808842463 2808606359 Bacteria 9866990
279 2808920974 2808606375 Bacteria 9466072
280 2809232619 2808606448 Bacteria 8656184
281 2812480156 2811994917 Bacteria 7761064
282 2852637286 2852635781 Bacteria 8251373
283 2862178959 2862178590 Bacteria 8583590
284 2862286069 2862281513 Bacteria 9621493
285 2862291372 2862290372 Bacteria 7471434
286 2862390472 2862382967 Bacteria 10317375
287 2862508126 2862507626 Bacteria 9425308
288 2862578848 2862574272 Bacteria 10567477
289 2862709543 2862705112 Bacteria 6563286
290 2863412719 2863404153 Bacteria 9672205
291 2867347546 2867346516 Bacteria 7608576
292 2867436438 2867428634 Bacteria 9590268
293 2867480416 2867475112 Bacteria 6909112
294 2877680656 2877676314 Bacteria 9512378
295 2912719372 2912715099 Bacteria 9460473
296 2912731415 2912723979 Bacteria 8557534
297 2912761298 2912757875 Bacteria 7940295
298 2918505158 2918501144 Bacteria 8668083
299 2919471872 2919468124 Bacteria 9133025
300 2935390809 2935390628 Bacteria 7043367
301 2939587200 2939582691 Bacteria 7088898
302 2946068220 2946064051 Bacteria 8957905
303 2946076355 2946072368 Bacteria 8999607
304 2947228703 2947224130 Bacteria 9938529
305 2954006818 2954002825 Bacteria 9173742
306 2954385784 2954380949 Bacteria 10050426
307 2954677372 2954673503 Bacteria 9685905
308 2954686781 2954682443 Bacteria 9862841
309 2954696430 2954691527 Bacteria 10720516
310 2954705847 2954701450 Bacteria 10834262
311 2954715786 2954711539 Bacteria 10867210
312 2954725723 2954721474 Bacteria 10456478
313 2954736077 2954731030 Bacteria 10243860
314 2954744677 2954740390 Bacteria 10229294
315 2954754937 2954749733 Bacteria 10366972
316 2954763644 2954759201 Bacteria 9358192
317 2990049951 2990044586 Bacteria 6603797
318 2990067702 2990059506 Bacteria 9321252
319 2990092130 2990088156 Bacteria 6657676
320 2997459054 2997451912 Bacteria 8492419
321 2997604684 2997600082 Bacteria 9896405
322 3006399602 3006393351 Bacteria 6615579
323 3006425742 3006425503 Bacteria 6491253
324 3006488467 3006486233 Bacteria 8157040
325 3006499400 3006493962 Bacteria 8825450
326 8008485962 8008485437 Bacteria 7198341
327 8008566828 8008558824 Bacteria 10610750
328 8008578517 8008574985 Bacteria 7815457
329 8023630506 8023623736 Bacteria 8593882
330 8025419880 8025413630 Bacteria 7014048
331 8025482615 8025478263 Bacteria 8209203
332 8025525278 8025524527 Bacteria 7197316
333 8047897598 8047893842 Bacteria 11723082
334 8048129635 8048127548 Bacteria 11053136
335 8048361272 8048356638 Bacteria 11044339
336 8048374585 8048369669 Bacteria 11666822
337 8048383637 8048379754 Bacteria 11877923
338 8048411518 8048406513 Bacteria 8936924
339 8053950902 8053945823 Bacteria 8962862
340 8054167422 8054160619 Bacteria 7783213
341 8056838055 8056829672 Bacteria 9045328
342 JGI24739J22299_10004358
343 JGI24737J22298_10030730
344 JGI24735J21928_10029870
345 rootH1_10001932
346 Ga0006562J51391_1133504
347 Ga0070683_100154228
348 Ga0070682_100012454
349 Ga0070682_100036115
350 Ga0070682_100209569
351 Ga0068868_100386921
352 Ga0070661_100188738
353 Ga0070714_100022482
354 Ga0070684_100116657
355 Ga0070672_100139961
356 Ga0081455_10057385
357 Ga0075363_100000647
358 Ga0075367_10000477
359 Ga0099826_10064850
360 Ga0105245_10019221
361 Ga0105245_10075208
362 Ga0105245_10170771
363 Ga0105243_10017323
364 Ga0105242_10082505
365 Ga0105248_10091565
366 Ga0105238_10285496
367 Ga0105246_10000301
368 Ga0105246_10198848
369 Ga0105246_10245006
370 Ga0182007_10001310
371 Ga0183367_1008
372 Ga0207426_1001179
373 Ga0207426_1002340
374 Ga0207426_1040323
375 Ga0207696_1014495
376 Ga0207647_10045920
377 Ga0207687_10145581
378 Ga0207664_10042789
379 Ga0207644_10182477
380 Ga0207691_10093185
381 Ga0207639_10095189
382 Ga0207678_10006636
383 Ga0207678_10140273
384 Ga0209371_1008285
385 Ga0268266_10340292
386 Ga0307515_10102156
387 Ga0307515_10104885
388 Ga0268256_1003874
389 Ga0307511_10000329
390 Ga0307512_10004248
391 Ga0307512_10145252
392 Ga0307513_10001562
393 Ga0307513_10050940
394 Ga0307509_10009843
395 Ga0307509_10219175
396 Ga0307508_10003864
397 Ga0307508_10022395
398 Ga0307508_10023874
399 Ga0307508_10086481
400 Ga0307514_10092832
401 Ga0307514_10188114
402 Ga0307516_10005023
403 Ga0307516_10090898
404 Ga0307516_10178471
405 Ga0307518_10122090
406 Ga0307518_10194538
407 Ga0307507_10011318
408 Ga0307507_10013995
409 Ga0307510_10009997
410 Ga0307510_10047304
411 Ga0307510_10057435
412 Ga0307510_10185839
413 Ga0395898_0005372
414 Ga0395898_0010354
415 Ga0436364_0796641
416 Ga0395901_0017972
417 Ga0436363_0840879
418 Ga0439436_0000353
419 Ga0439436_0011776
420 Ga0439439_0002365
421 Ga0439439_0018373
422 Ga0439465_0015857
423 Ga0451853_0314754
424 Ga0451853_0610575
425 Ga0451853_1296431
426 Ga0451853_3472216
427 Ga0439433_0001489
428 Ga0439448_0004266
429 Ga0439449_0008421
430 Ga0439449_0029282
431 Ga0439455_0001021
432 Ga0439457_000052
433 Ga0439457_001432
434 Ga0450894_000007
435 Ga0450903_000241
436 Ga0439434_0004205
437 Ga0466972_0001531
438 Ga0466972_0003711
439 Ga0466965_0000511
440 Ga0466966_0008614
441 Ga0466961_0000939
442 Ga0466961_0003685
443 Ga0466964_0003258
444 Ga0466971_0004269
445 Ga0466968_0001222
446 Ga0466970_0000723
447 Ga0466970_0076765
448 Ga0466957_0000165
449 Ga0466960_0003998
450 Ga0466959_0009918
451 Ga0466958_0000098
452 Ga0466967_0016816
453 Ga0495592_0009168
454 Ga0495592_0015789
455 Ga0495603_0000397
456 Ga0495603_0016832
457 Ga0495590_0012527
458 Ga0495629_0006220
459 Ga0495629_0074139
460 Ga0495629_0135964
461 Ga0495629_0235157
462 Ga0495638_0057915
463 Ga0495641_0021422
464 Ga0495651_0019669
465 Ga0495651_0038038
466 Ga0495582_0111599
467 Ga0495582_0122237
468 Ga0495582_0184775
469 Ga0495639_0073677
470 Ga0495662_0001388
471 Ga0495662_0007710
472 Ga0495664_0076475
473 Ga0495594_0034736
474 Ga0495596_0009299
475 Ga0495607_0015362
476 Ga0495583_0022505
477 Ga0495606_0005611
478 Ga0495618_0130894
479 Ga0495620_0002474
480 Ga0495630_0037382
481 Ga0495630_0107050
482 Ga0495632_0047246
483 Ga0495648_0045129
484 Ga0495666_0074848
485 Ga0495652_0005385
486 Ga0495654_0030817
487 Ga0495587_0003421
488 Ga0495587_0034969
489 Ga0495622_0038924
490 Ga0495622_0096438
491 Ga0495668_0025534
492 Ga0495668_0030807
493 Ga0495634_0002809
494 Ga0495611_0012535
495 Ga0495625_0007788
496 Ga0495625_0052591
497 Ga0495635_0005445
498 Ga0495635_0080348
499 Ga0495661_0066688
500 Ga0495588_0005175
501 Ga0495588_0013867
502 Ga0495588_0104761
503 Ga0495657_0001872
504 Ga0495657_0003851
505 Ga0495658_0025555
506 Ga0495613_0001140
507 Ga0495613_0017607
508 Ga0495613_0036051
509 Ga0495613_0060558
510 Ga0495624_0038803
511 Ga0495671_0018903
512 Ga0495671_0068310
513 Ga0495649_0004931
514 Ga0495649_0131479
515 Ga0495589_0008335
516 Ga0495589_0016386
517 Ga0495589_0030826
518 Ga0495600_0114842
519 Ga0495600_0135754
520 Ga0495581_0001829
521 Ga0495581_0005490
522 Ga0495581_0156647
523 Ga0495604_0003973
524 Ga0495604_0030095
525 Ga0495636_0029361
526 Ga0495674_0061546
527 Ga0495676_0011291
528 Ga0495676_0029079
529 Ga0495680_0008925
530 Ga0495687_002121
531 Ga0495687_002277
532 Ga0495687_013229
533 Ga0495687_039125
534 Ga0495675_0003276
535 Ga0495675_0083381
536 Ga0495685_001906
537 Ga0495685_001952
538 Ga0495685_021440
539 Ga0495681_0002640
540 Ga0495593_0015043
541 Ga0495593_0016795
542 Ga0495602_0227272
543 Ga0495614_0011242
544 Ga0495614_0014746
545 Ga0495626_0006802
546 Ga0496101_0047807
547 Ga0496101_0334990
548 Ga0496108_0006239
549 Ga0496108_0027618
550 Ga0496108_0142496
551 Ga0496109_0017010
552 Ga0496109_0047123
553 Ga0496110_0043171
554 Ga0496110_0065122
555 Ga0496112_0001718
556 Ga0496112_0069976
557 Ga0496113_0023195
558 Ga0496114_0097801
559 Ga0496114_0116680
560 Ga0496126_0051856
561 Ga0501033_0002140
562 Ga0501033_0036313
563 Ga0501034_0003595
564 Ga0501034_0035975
565 Ga0501036_0001328
566 Ga0501036_0003205
567 Ga0501037_0010613
568 Ga0501037_0086863
569 Ga0501038_0005293
570 Ga0501038_0093525
571 Ga0501038_0147780
572 Ga0501039_0016899
573 Ga0501039_0352203
574 Ga0501043_0003883
575 Ga0501043_0004711
576 Ga0501043_0156383
577 Ga0501046_0179569
578 Ga0501047_0030207
579 Ga0501047_0047730
580 Ga0501047_0129044
581 Ga0501048_0005930
582 Ga0501074_0026059
583 Ga0501257_021597
584 Ga0501080_0059716
585 Ga0501035_0003497
586 Ga0501035_0088478
587 Ga0501044_0001603
588 Ga0501044_0003731
589 Ga0501044_0010232
590 Ga0501044_0061757
591 Ga0501045_0122236
592 nmdc:mga03n38_17658_c1
593 nmdc:mga06z11_3304_c1
594 Ga0495619_0138938
595 Ga0500640_001269
596 Ga0500553_053928
597 Ga0500560_007253
598 Ga0500572_001385
599 Ga0466962_0000132
600 Ga0466962_0038082
601 2812357636
602 2547406075
603 2554257534
604 2585310851
605 2616700344
606 2616702160
607 2643947896
608 2644262891
609 2644390666
610 2644433762
611 2644443098
612 2644627094
613 2784589018
614 2785342831
615 2785369972
616 2786671043
617 2793979132
618 2804846368
619 2808842463
620 2808920974
621 2809232619
622 2812480156
623 2852637286
624 2862178959
625 2862286069
626 2862291372
627 2862390472
628 2862508126
629 2862578848
630 2862709543
631 2863412719
632 2867347546
633 2867436438
634 2867480416
635 2877680656
636 2912719372
637 2912731415
638 2912761298
639 2918505158
640 2919471872
641 2935390809
642 2939587200
643 2946068220
644 2946076355
645 2947228703
646 2954006818
647 2954385784
648 2954677372
649 2954686781
650 2954696430
651 2954705847
652 2954715786
653 2954725723
654 2954736077
655 2954744677
656 2954754937
657 2954763644
658 2990049951
659 2990067702
660 2990092130
661 2997459054
662 2997604684
663 3006399602
664 3006425742
665 3006488467
666 3006499400
667 8008485962
668 8008566828
669 8008578517
670 8023630506
671 8025419880
672 8025482615
673 8025525278
674 8047897598
675 8048129635
676 8048361272
677 8048374585
678 8048383637
679 8048411518
680 8053950902
681 8054167422
682 8056838055

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01053

Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

96

449

0.93

PF00266

Aminotran_5

Aminotransferase class-V

146

304

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e6g-assembly1.cif.gz_B crystal structure of xometc, a cystathionine c-lyase-like protein from xanthomonas oryzae pv.oryzae 0.9304 57 376
4l0o-assembly3.cif.gz_G-3 structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9299 12 379
3e6g-assembly1.cif.gz_D crystal structure of xometc, a cystathionine c-lyase-like protein from xanthomonas oryzae pv.oryzae 0.9296 57 376
4l0o-assembly2.cif.gz_E structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9288 15 379
4l0o-assembly2.cif.gz_M-2 structure determination of cystathionine gamma-synthase from helicobacter pylori 0.9284 12 379
ID Description Score Start End Superfamily
2nmpB02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.954 259 381 3.90.1150.10
3ri6B02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9467 260 378 3.90.1150.10
af_P32929_263_402_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9416 259 381 3.90.1150.10
af_Q2G0V3_247_380_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9409 259 379 3.90.1150.10
af_O02215_318_451_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9387 259 379 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A6B2XKT0-F1-model_v4 Cystathionine gamma-lyase (EC 4.4.1.1) 0.972 115 302 GO:0004123
GO:0005737
GO:0019343
GO:0019346
GO:0030170
GO:0044540
GO:0080146
AF-A0A087TV62-F1-model_v4 cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-cystathionase) 0.9655 160 341 GO:0004123
GO:0005737
GO:0019343
GO:0019346
GO:0030170
GO:0044540
GO:0080146
AF-A0A2S8LLW9-F1-model_v4 deleted 0.9644 142 378
AF-A0A1S2PGI3-F1-model_v4 Cystathionine gamma-lyase 0.9641 10 383 GO:0004123
GO:0005737
GO:0019343
GO:0019346
GO:0030170
AF-T0JSG8-F1-model_v4 cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-cystathionase) 0.9632 162 313 GO:0003962
GO:0004123
GO:0005737
GO:0019343
GO:0019346
GO:0030170

Map