F414911

General Info

Members Datasets Scaffolds Average Seq Length
341 237 682 411

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0003733|Ga0501032_0003733_7356_8639
Length 409
Sequence MSSPTLLPTSAARTPADADAPEPGDAQLDTADELLSLLHTSTTESRPDEQLEALTLAVAADLPVLLWGEPGIGKTAALTQLAASLDLPLTTVIASVHEPTDFSGLPIVGEDPEERGVPMAPPRWAVELVRAGRGLLFLDELSTATPAVQAALLRVVLERRVGTLRLPPGVRIVAAANPSASAADGWELSPPLANRFVHLHWVHDRDVVVRGLGGVWPRPELPRLAPALLADAVAFAQRAVCGFLAARPTLIHRLPNTETRRFGTAASVSREVLALLVRGAVGDGPGLELLAHLDRMDLPDPETLLADPAAAELPARGDLRQATLDAVVAAVGARPERARWEAAWAVLVRALETGAPDLLVAPAGALAALRRDEWEVPEAVERLVGVVGLAKRTDRSVQRALKAGAGAQR

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
13 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
16 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
17 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
24 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
25 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
26 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
27 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
33 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
34 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
35 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
36 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
37 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
38 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
39 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
40 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
41 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
42 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
43 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
44 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
45 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
46 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
47 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
48 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
49 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
50 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
51 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
52 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
53 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
56 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
57 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
58 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
62 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
63 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
64 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
65 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
66 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
67 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
68 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
72 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
73 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
74 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
75 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
78 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
79 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
85 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
86 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
87 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
88 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
89 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
90 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
91 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
92 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
93 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
94 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
95 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
96 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
97 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
100 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
101 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
102 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
103 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
104 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
107 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
110 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
111 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
112 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
113 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
116 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
120 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
121 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
122 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
123 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
131 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
138 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
139 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
140 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
143 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
144 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
145 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
147 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
151 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
152 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
153 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
154 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
155 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
156 2508501039 Frankia saprophytica CN3 Isolate Nodule
157 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
158 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
159 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
160 2547132424 Nocardia nova SH22a Isolate Unclassified
161 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
162 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
163 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
164 2643221548 Streptomyces sp. Root55 Isolate Unclassified
165 2643221578 Streptomyces sp. Root63 Isolate Unclassified
166 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
167 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
168 2643221647 Streptomyces sp. Root369 Isolate Unclassified
169 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
170 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
171 2643221692 Nocardia sp. Root136 Isolate Unclassified
172 2643221714 Streptomyces sp. Root264 Isolate Unclassified
173 2671180195 Frankia sp. CcI49 Isolate Nodule
174 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
175 2687453737 Frankia sp. BMG5.36 Isolate Nodule
176 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
177 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
178 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
179 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
180 2773857922 Frankia sp. CcI49 Isolate Nodule
181 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
182 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
183 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
184 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
185 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
186 2808606448 Streptomyces sp. 193411 Isolate Unclassified
187 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
188 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
189 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
190 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
191 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
192 2855683550 Micromonospora sp. RP3T Isolate Unclassified
193 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
194 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
195 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
196 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
197 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
198 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
199 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
200 2867428634 Streptomyces sp. RP5T Isolate Unclassified
201 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
202 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
203 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
204 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
205 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
206 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
207 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
208 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
209 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
210 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
211 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
212 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
213 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
214 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
215 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
216 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
217 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
218 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
219 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
220 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
221 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
222 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
223 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
224 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
225 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
226 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
227 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
228 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
229 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
230 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
231 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
232 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
233 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
234 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
235 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
236 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere
237 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.95
Metatranscriptomes 0
Isolates 24.05

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.76
Nodule 1.76
Rhizoplane 0.88
Rhizosphere 76.54
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0003733 3300049569 Bacteria 11552
2 JGI25406J46586_10004545 3300003203 Bacteria 6458
3 JGI25153J46596_10032455 3300003215 Bacteria 1741
4 rootH1_10005680 3300003316 Bacteria 11142
5 rootH2_10097055 3300003320 Bacteria 4272
6 rootL2_10027485 3300003322 Bacteria 3288
7 Ga0070714_100014433 3300005435 Bacteria 6345
8 Ga0070713_100417707 3300005436 Bacteria 1255
9 Ga0070710_10001327 3300005437 Bacteria 11669
10 Ga0070679_100077509 3300005530 Bacteria 3313
11 Ga0068853_100013584 3300005539 Bacteria 6652
12 Ga0081539_10000186 3300005985 Bacteria 147547
13 Ga0075367_10000942 3300006178 Bacteria 11826
14 Ga0075428_100000113 3300006844 Bacteria 68966
15 Ga0105238_10177749 3300009551 Bacteria 2105
16 Ga0183367_1001 3300015688 Bacteria 1225545
17 Ga0207692_10009882 3300025898 Bacteria 3999
18 Ga0207694_10019239 3300025924 Bacteria 5162
19 Ga0207664_10015394 3300025929 Bacteria 5550
20 Ga0207665_10187241 3300025939 Bacteria 1502
21 Ga0207678_10054050 3300026067 Bacteria 3459
22 Ga0207674_10115908 3300026116 Bacteria 2651
23 Ga0307517_10015699 3300028786 Bacteria 10033
24 Ga0307515_10000294 3300028794 Bacteria 123065
25 Ga0307515_10001023 3300028794 Bacteria 63806
26 Ga0307515_10077661 3300028794 Bacteria 4382
27 Ga0307511_10001886 3300030521 Bacteria 22019
28 Ga0307512_10001730 3300030522 Bacteria 29786
29 Ga0307512_10007240 3300030522 Bacteria 11040
30 Ga0307512_10020565 3300030522 Bacteria 5967
31 Ga0307512_10065254 3300030522 Bacteria 2762
32 Ga0314311_1216453 3300030733 Bacteria 2045
33 Ga0307513_10081133 3300031456 Bacteria 3343
34 Ga0307509_10034816 3300031507 Bacteria 5532
35 Ga0307509_10040231 3300031507 Bacteria 5085
36 Ga0307508_10010934 3300031616 Bacteria 8301
37 Ga0307508_10020059 3300031616 Bacteria 6071
38 Ga0307508_10066877 3300031616 Bacteria 3162
39 Ga0307514_10017125 3300031649 Bacteria 5965
40 Ga0307514_10172792 3300031649 Bacteria 1408
41 Ga0307516_10000167 3300031730 Bacteria 83099
42 Ga0307516_10005877 3300031730 Bacteria 14523
43 Ga0307516_10021233 3300031730 Bacteria 6689
44 Ga0307413_10026704 3300031824 Bacteria 3187
45 Ga0307413_10047264 3300031824 Bacteria 2565
46 Ga0307518_10048864 3300031838 Bacteria 3075
47 Ga0307409_100013395 3300031995 Bacteria 5276
48 Ga0307416_100007360 3300032002 Bacteria 6993
49 Ga0307415_100041335 3300032126 Bacteria 3061
50 Ga0307415_100071275 3300032126 Bacteria 2443
51 Ga0307415_100071655 3300032126 Bacteria 2438
52 Ga0307415_100095886 3300032126 Bacteria 2161
53 Ga0307507_10024380 3300033179 Bacteria 6597
54 Ga0307507_10046978 3300033179 Bacteria 4224
55 Ga0307510_10024619 3300033180 Bacteria 6951
56 Ga0307510_10031857 3300033180 Bacteria 5946
57 Ga0307510_10087209 3300033180 Bacteria 2988
58 Ga0395898_0000852 3300037466 Bacteria 50067
59 Ga0439439_0003201 3300041406 Bacteria 3587
60 Ga0439449_0008996 3300042007 Bacteria 3788
61 Ga0439455_0008245 3300042012 Bacteria 2229
62 Ga0439457_000503 3300042014 Bacteria 11321
63 Ga0439457_004447 3300042014 Bacteria 3648
64 Ga0450894_000094 3300042131 Bacteria 14685
65 Ga0450903_000055 3300042138 Bacteria 23409
66 Ga0439458_0007170 3300042157 Bacteria 2479
67 Ga0466969_0038998 3300044656 Bacteria 2388
68 Ga0466972_0009256 3300044658 Bacteria 4948
69 Ga0466965_0000580 3300044683 Bacteria 13278
70 Ga0466966_0007980 3300044684 Bacteria 7015
71 Ga0466966_0041288 3300044684 Bacteria 2964
72 Ga0466961_0011617 3300044693 Bacteria 5628
73 Ga0466963_0003803 3300044694 Bacteria 8703
74 Ga0466971_0002903 3300044719 Bacteria 7271
75 Ga0466970_0005718 3300044765 Bacteria 6176
76 Ga0466970_0143543 3300044765 Bacteria 1316
77 Ga0466957_0006101 3300044842 Bacteria 6802
78 Ga0466960_0044434 3300044901 Bacteria 2118
79 Ga0466959_0007952 3300045049 Bacteria 7468
80 Ga0466959_0041110 3300045049 Bacteria 3413
81 Ga0466958_0035599 3300045836 Bacteria 2974
82 Ga0466967_0009949 3300045976 Bacteria 7100
83 Ga0466967_0031534 3300045976 Bacteria 4463
84 Ga0495592_0003753 3300046454 Bacteria 10963
85 Ga0495603_0001007 3300046455 Bacteria 16266
86 Ga0495629_0005278 3300046459 Bacteria 9657
87 Ga0495629_0008125 3300046459 Bacteria 7722
88 Ga0495629_0012408 3300046459 Bacteria 6171
89 Ga0495629_0039494 3300046459 Bacteria 3321
90 Ga0495629_0055730 3300046459 Bacteria 2764
91 Ga0495629_0056126 3300046459 Bacteria 2754
92 Ga0495651_0008007 3300046462 Bacteria 8103
93 Ga0495651_0127952 3300046462 Bacteria 1858
94 Ga0495580_0034248 3300046472 Bacteria 3657
95 Ga0495582_0062428 3300046473 Bacteria 2058
96 Ga0495605_0012829 3300046474 Bacteria 4637
97 Ga0495639_0011975 3300046475 Bacteria 3740
98 Ga0495662_0000988 3300046476 Bacteria 13915
99 Ga0495662_0001608 3300046476 Bacteria 11226
100 Ga0495662_0002223 3300046476 Bacteria 9790
101 Ga0495662_0005614 3300046476 Bacteria 6273
102 Ga0495662_0011354 3300046476 Bacteria 4354
103 Ga0495664_0001446 3300046477 Bacteria 12587
104 Ga0495664_0002524 3300046477 Bacteria 9830
105 Ga0495585_0003900 3300046492 Bacteria 9902
106 Ga0495585_0014730 3300046492 Bacteria 4549
107 Ga0495585_0060528 3300046492 Bacteria 2083
108 Ga0495594_0007836 3300046499 Bacteria 5492
109 Ga0495594_0009636 3300046499 Bacteria 4993
110 Ga0495594_0128568 3300046499 Bacteria 1434
111 Ga0495596_0048186 3300046500 Bacteria 1671
112 Ga0495607_0072862 3300046501 Bacteria 1911
113 Ga0495583_0016750 3300046506 Bacteria 3924
114 Ga0495583_0063399 3300046506 Bacteria 1642
115 Ga0495606_0024504 3300046507 Bacteria 4346
116 Ga0495608_0020421 3300046511 Bacteria 4552
117 Ga0495608_0097055 3300046511 Bacteria 1903
118 Ga0495610_0030764 3300046512 Bacteria 2808
119 Ga0495616_0008558 3300046513 Bacteria 6048
120 Ga0495618_0016464 3300046514 Bacteria 4523
121 Ga0495620_0029604 3300046515 Bacteria 2531
122 Ga0495630_0009389 3300046517 Bacteria 7028
123 Ga0495631_0010120 3300046518 Bacteria 4682
124 Ga0495632_0021881 3300046519 Bacteria 3437
125 Ga0495643_0012712 3300046522 Bacteria 5067
126 Ga0495648_0050161 3300046524 Bacteria 2553
127 Ga0495666_0049544 3300046526 Bacteria 2020
128 Ga0495666_0071391 3300046526 Bacteria 1650
129 Ga0495652_0035903 3300046529 Bacteria 4312
130 Ga0495652_0149734 3300046529 Bacteria 1825
131 Ga0495652_0234161 3300046529 Bacteria 1371
132 Ga0495665_0014162 3300046531 Bacteria 4305
133 Ga0495640_0064522 3300046533 Bacteria 2475
134 Ga0495640_0082107 3300046533 Bacteria 2142
135 Ga0495587_0006054 3300046536 Bacteria 7890
136 Ga0495609_0028851 3300046538 Bacteria 2529
137 Ga0495645_0037210 3300046543 Bacteria 3546
138 Ga0495633_0030170 3300046558 Bacteria 2635
139 Ga0495667_0029854 3300046559 Bacteria 3667
140 Ga0495656_0064531 3300046615 Bacteria 1608
141 Ga0495634_0016455 3300046642 Bacteria 5290
142 Ga0495634_0120979 3300046642 Bacteria 1676
143 Ga0495625_0001174 3300046660 Bacteria 33644
144 Ga0495635_0014938 3300046663 Bacteria 5431
145 Ga0495635_0017458 3300046663 Bacteria 5012
146 Ga0495588_0001845 3300046674 Bacteria 9031
147 Ga0495588_0099559 3300046674 Bacteria 1527
148 Ga0495657_0001939 3300046675 Bacteria 17648
149 Ga0495657_0004659 3300046675 Bacteria 10938
150 Ga0495599_0026052 3300046678 Bacteria 3663
151 Ga0495623_0020608 3300046679 Bacteria 4261
152 Ga0495646_0057670 3300046680 Bacteria 2323
153 Ga0495613_0001614 3300046689 Bacteria 17154
154 Ga0495613_0005318 3300046689 Bacteria 9672
155 Ga0495613_0005590 3300046689 Bacteria 9437
156 Ga0495613_0009294 3300046689 Bacteria 7293
157 Ga0495613_0021405 3300046689 Bacteria 4820
158 Ga0495649_0019626 3300046694 Bacteria 3797
159 Ga0495589_0010704 3300046794 Bacteria 4768
160 Ga0495589_0018221 3300046794 Bacteria 3602
161 Ga0495589_0027897 3300046794 Bacteria 2853
162 Ga0495589_0043352 3300046794 Bacteria 2239
163 Ga0495581_0013557 3300047315 Bacteria 4727
164 Ga0495581_0016337 3300047315 Bacteria 4317
165 Ga0495581_0030340 3300047315 Bacteria 3133
166 Ga0495604_0000463 3300047317 Bacteria 36017
167 Ga0495604_0004076 3300047317 Bacteria 11614
168 Ga0495604_0021384 3300047317 Bacteria 5165
169 Ga0495604_0025458 3300047317 Bacteria 4715
170 Ga0495636_0004318 3300047318 Bacteria 5579
171 Ga0495636_0005984 3300047318 Bacteria 4776
172 Ga0495676_0009907 3300047321 Bacteria 8655
173 Ga0495676_0019531 3300047321 Bacteria 5959
174 Ga0495676_0032744 3300047321 Bacteria 4384
175 Ga0495676_0039512 3300047321 Bacteria 3907
176 Ga0495676_0094999 3300047321 Bacteria 2219
177 Ga0495683_0076464 3300047323 Bacteria 1638
178 Ga0495687_001642 3300047443 Bacteria 20129
179 Ga0495687_003053 3300047443 Bacteria 12559
180 Ga0495675_0007633 3300047444 Bacteria 6670
181 Ga0495675_0009883 3300047444 Bacteria 5947
182 Ga0495675_0013979 3300047444 Bacteria 5076
183 Ga0495685_004669 3300047447 Bacteria 4443
184 Ga0495685_023715 3300047447 Bacteria 2112
185 Ga0495681_0006773 3300047470 Bacteria 7456
186 Ga0495681_0020500 3300047470 Bacteria 3586
187 Ga0495681_0040841 3300047470 Bacteria 2256
188 Ga0495593_0001223 3300047673 Bacteria 15018
189 Ga0495593_0015162 3300047673 Bacteria 4374
190 Ga0495602_0037919 3300048088 Bacteria 4463
191 Ga0495614_0003926 3300048089 Bacteria 6677
192 Ga0495614_0039366 3300048089 Bacteria 2028
193 Ga0495614_0044411 3300048089 Bacteria 1906
194 Ga0495626_0000075 3300048091 Bacteria 132098
195 Ga0496109_0007455 3300048912 Bacteria 9263
196 Ga0496110_0273773 3300048913 Bacteria 1537
197 Ga0496112_0284013 3300048915 Bacteria 1602
198 Ga0496126_0020050 3300048929 Bacteria 6566
199 Ga0501031_0018210 3300049568 Bacteria 4571
200 Ga0501031_0025127 3300049568 Bacteria 3885
201 Ga0501032_0001869 3300049569 Bacteria 16653
202 Ga0501032_0027443 3300049569 Bacteria 3912
203 Ga0501033_0004571 3300049570 Bacteria 11087
204 Ga0501034_0003558 3300049571 Bacteria 17705
205 Ga0501034_0031248 3300049571 Bacteria 5410
206 Ga0501034_0086714 3300049571 Bacteria 3131
207 Ga0501034_0088772 3300049571 Bacteria 3089
208 Ga0501034_0089088 3300049571 Bacteria 3083
209 Ga0501036_0004814 3300049572 Bacteria 10914
210 Ga0501036_0148422 3300049572 Bacteria 1978
211 Ga0501037_0003166 3300049573 Bacteria 11949
212 Ga0501037_0027647 3300049573 Bacteria 4191
213 Ga0501037_0028372 3300049573 Bacteria 4134
214 Ga0501038_0000246 3300049574 Bacteria 45848
215 Ga0501038_0014445 3300049574 Bacteria 7197
216 Ga0501038_0068776 3300049574 Bacteria 3010
217 Ga0501039_0060355 3300049575 Bacteria 2937
218 Ga0501039_0194971 3300049575 Bacteria 1592
219 Ga0501042_0029100 3300049578 Bacteria 3896
220 Ga0501043_0004495 3300049579 Bacteria 11329
221 Ga0501043_0021453 3300049579 Bacteria 5064
222 Ga0501043_0022266 3300049579 Bacteria 4971
223 Ga0501046_0007718 3300049580 Bacteria 9432
224 Ga0501046_0108014 3300049580 Bacteria 2128
225 Ga0501047_0008296 3300049581 Bacteria 9805
226 Ga0501047_0040663 3300049581 Bacteria 4496
227 Ga0501047_0049148 3300049581 Bacteria 4072
228 Ga0501047_0065026 3300049581 Bacteria 3517
229 Ga0501047_0143540 3300049581 Bacteria 2265
230 Ga0501048_0053126 3300049582 Bacteria 2882
231 Ga0501068_0010215 3300049584 Bacteria 5269
232 Ga0501069_0022825 3300049585 Bacteria 3407
233 Ga0501069_0111566 3300049585 Bacteria 1558
234 Ga0501070_0026960 3300049586 Bacteria 4818
235 Ga0501072_0118797 3300049588 Bacteria 2106
236 Ga0501074_0042910 3300049590 Bacteria 3272
237 Ga0501079_0004106 3300049741 Bacteria 10773
238 Ga0501080_0206013 3300049742 Bacteria 1804
239 Ga0501083_0002699 3300049744 Bacteria 12235
240 Ga0501035_0000169 3300049822 Bacteria 80050
241 Ga0501035_0006688 3300049822 Bacteria 10772
242 Ga0501035_0049943 3300049822 Bacteria 3749
243 Ga0501035_0051259 3300049822 Bacteria 3695
244 Ga0501035_0099243 3300049822 Bacteria 2556
245 Ga0501044_0000257 3300049823 Bacteria 67206
246 Ga0501044_0001425 3300049823 Bacteria 28056
247 Ga0501044_0030580 3300049823 Bacteria 5673
248 Ga0501044_0051871 3300049823 Bacteria 4229
249 Ga0501044_0386694 3300049823 Bacteria 1313
250 nmdc:mga06z11_2659_c1 3300050494 Bacteria 6851
251 nmdc:mga06r32_223646_c1 3300050510 Bacteria 1870
252 Ga0495601_0064079 3300053077 Bacteria 2336
253 Ga0495619_0028247 3300053085 Bacteria 3618
254 Ga0500561_0000718 3300053137 Bacteria 5264
255 Ga0500573_0051274 3300053140 Bacteria 2373
256 Ga0500633_0002506 3300053160 Bacteria 3796
257 Ga0501082_0005118 3300060353 Bacteria 11417
258 Ga0466962_0010185 3300061719 Bacteria 4515
259 Ga0466962_0033367 3300061719 Bacteria 2462
260 2508677593 2508501039 Bacteria 9978592
261 2515721645 2515154129 Bacteria 5584369
262 2516085920 2515154202 Bacteria 5471270
263 2547405720 2547132111 Bacteria 8013147
264 2548696976 2547132424 Bacteria 8348532
265 2585306575 2582581313 Bacteria 10042643
266 2585314007 2582581314 Bacteria 11452267
267 2616699034 2616644814 Bacteria 11555299
268 2643762151 2643221548 Bacteria 8053412
269 2643901848 2643221578 Bacteria 9213798
270 2644016079 2643221601 Bacteria 7493239
271 2644179563 2643221631 Bacteria 8168043
272 2644263426 2643221647 Bacteria 10741251
273 2644407994 2643221673 Bacteria 9196637
274 2644459071 2643221682 Bacteria 6743283
275 2644512635 2643221692 Bacteria 7282860
276 2644632319 2643221714 Bacteria 9015452
277 2671837953 2671180195 Bacteria 9757215
278 2676490130 2675903060 Bacteria 10051191
279 2689961854 2687453737 Bacteria 11203906
280 2739203679 2738543005 Bacteria 5278128
281 2753072796 2751185734 Bacteria 8863695
282 2753264631 2751185782 Bacteria 11227053
283 2768642193 2767802112 Bacteria 6465194
284 2774856109 2773857922 Bacteria 9757215
285 2784586565 2784132148 Bacteria 8627943
286 2785346396 2784746763 Bacteria 9783172
287 2785366669 2784746768 Bacteria 10036182
288 2786667743 2786546132 Bacteria 10419719
289 2808918002 2808606375 Bacteria 9466072
290 2809230079 2808606448 Bacteria 8656184
291 2812357421 2811994879 Bacteria 9313447
292 2812483185 2811994917 Bacteria 7761064
293 2819697610 2818991463 Bacteria 7948711
294 2819745387 2818991472 Bacteria 10089953
295 2832006327 2832004796 Bacteria 6538017
296 2855683572 2855683550 Bacteria 7134265
297 2858907049 2858902515 Bacteria 7086037
298 2861526180 2861520306 Bacteria 8348283
299 2862284030 2862281513 Bacteria 9621493
300 2862391767 2862382967 Bacteria 10317375
301 2863407967 2863404153 Bacteria 9672205
302 2866067086 2866065130 Bacteria 6518152
303 2867325194 2867319477 Bacteria 7069771
304 2867437170 2867428634 Bacteria 9590268
305 2870723302 2870721527 Bacteria 9689237
306 2873158629 2873151551 Bacteria 8625867
307 2877683880 2877676314 Bacteria 9512378
308 2884694048 2884693830 Bacteria 11273186
309 2895448117 2895442618 Bacteria 11027144
310 2912724124 2912723979 Bacteria 8557534
311 2918508546 2918501144 Bacteria 8668083
312 2919472317 2919468124 Bacteria 9133025
313 2946046733 2946045630 Bacteria 8527308
314 2946068439 2946064051 Bacteria 8957905
315 2946077815 2946072368 Bacteria 8999607
316 2947228476 2947224130 Bacteria 9938529
317 2954389162 2954380949 Bacteria 10050426
318 2954673883 2954673503 Bacteria 9685905
319 2954690108 2954682443 Bacteria 9862841
320 2954699914 2954691527 Bacteria 10720516
321 2954702285 2954701450 Bacteria 10834262
322 2954718789 2954711539 Bacteria 10867210
323 2954728759 2954721474 Bacteria 10456478
324 2954733051 2954731030 Bacteria 10243860
325 2954747657 2954740390 Bacteria 10229294
326 2954751932 2954749733 Bacteria 10366972
327 2954766781 2954759201 Bacteria 9358192
328 2966600314 2966598605 Bacteria 7676064
329 2995471510 2995463766 Bacteria 8577691
330 2997455639 2997451912 Bacteria 8492419
331 2997601339 2997600082 Bacteria 9896405
332 3006393553 3006393351 Bacteria 6615579
333 3006494195 3006493962 Bacteria 8825450
334 8001783410 8001781756 Bacteria 9586736
335 8008560697 8008558824 Bacteria 10610750
336 8008581781 8008574985 Bacteria 7815457
337 8023631338 8023623736 Bacteria 8593882
338 8025531938 8025530807 Bacteria 8495698
339 8048407331 8048406513 Bacteria 8936924
340 8056830907 8056829672 Bacteria 9045328
341 8057573247 8057568493 Bacteria 7221719
342 Ga0501032_0003733
343 JGI25406J46586_10004545
344 JGI25153J46596_10032455
345 rootH1_10005680
346 rootH2_10097055
347 rootL2_10027485
348 Ga0070714_100014433
349 Ga0070713_100417707
350 Ga0070710_10001327
351 Ga0070679_100077509
352 Ga0068853_100013584
353 Ga0081539_10000186
354 Ga0075367_10000942
355 Ga0075428_100000113
356 Ga0105238_10177749
357 Ga0183367_1001
358 Ga0207692_10009882
359 Ga0207694_10019239
360 Ga0207664_10015394
361 Ga0207665_10187241
362 Ga0207678_10054050
363 Ga0207674_10115908
364 Ga0307517_10015699
365 Ga0307515_10000294
366 Ga0307515_10001023
367 Ga0307515_10077661
368 Ga0307511_10001886
369 Ga0307512_10001730
370 Ga0307512_10007240
371 Ga0307512_10020565
372 Ga0307512_10065254
373 Ga0314311_1216453
374 Ga0307513_10081133
375 Ga0307509_10034816
376 Ga0307509_10040231
377 Ga0307508_10010934
378 Ga0307508_10020059
379 Ga0307508_10066877
380 Ga0307514_10017125
381 Ga0307514_10172792
382 Ga0307516_10000167
383 Ga0307516_10005877
384 Ga0307516_10021233
385 Ga0307413_10026704
386 Ga0307413_10047264
387 Ga0307518_10048864
388 Ga0307409_100013395
389 Ga0307416_100007360
390 Ga0307415_100041335
391 Ga0307415_100071275
392 Ga0307415_100071655
393 Ga0307415_100095886
394 Ga0307507_10024380
395 Ga0307507_10046978
396 Ga0307510_10024619
397 Ga0307510_10031857
398 Ga0307510_10087209
399 Ga0395898_0000852
400 Ga0439439_0003201
401 Ga0439449_0008996
402 Ga0439455_0008245
403 Ga0439457_000503
404 Ga0439457_004447
405 Ga0450894_000094
406 Ga0450903_000055
407 Ga0439458_0007170
408 Ga0466969_0038998
409 Ga0466972_0009256
410 Ga0466965_0000580
411 Ga0466966_0007980
412 Ga0466966_0041288
413 Ga0466961_0011617
414 Ga0466963_0003803
415 Ga0466971_0002903
416 Ga0466970_0005718
417 Ga0466970_0143543
418 Ga0466957_0006101
419 Ga0466960_0044434
420 Ga0466959_0007952
421 Ga0466959_0041110
422 Ga0466958_0035599
423 Ga0466967_0009949
424 Ga0466967_0031534
425 Ga0495592_0003753
426 Ga0495603_0001007
427 Ga0495629_0005278
428 Ga0495629_0008125
429 Ga0495629_0012408
430 Ga0495629_0039494
431 Ga0495629_0055730
432 Ga0495629_0056126
433 Ga0495651_0008007
434 Ga0495651_0127952
435 Ga0495580_0034248
436 Ga0495582_0062428
437 Ga0495605_0012829
438 Ga0495639_0011975
439 Ga0495662_0000988
440 Ga0495662_0001608
441 Ga0495662_0002223
442 Ga0495662_0005614
443 Ga0495662_0011354
444 Ga0495664_0001446
445 Ga0495664_0002524
446 Ga0495585_0003900
447 Ga0495585_0014730
448 Ga0495585_0060528
449 Ga0495594_0007836
450 Ga0495594_0009636
451 Ga0495594_0128568
452 Ga0495596_0048186
453 Ga0495607_0072862
454 Ga0495583_0016750
455 Ga0495583_0063399
456 Ga0495606_0024504
457 Ga0495608_0020421
458 Ga0495608_0097055
459 Ga0495610_0030764
460 Ga0495616_0008558
461 Ga0495618_0016464
462 Ga0495620_0029604
463 Ga0495630_0009389
464 Ga0495631_0010120
465 Ga0495632_0021881
466 Ga0495643_0012712
467 Ga0495648_0050161
468 Ga0495666_0049544
469 Ga0495666_0071391
470 Ga0495652_0035903
471 Ga0495652_0149734
472 Ga0495652_0234161
473 Ga0495665_0014162
474 Ga0495640_0064522
475 Ga0495640_0082107
476 Ga0495587_0006054
477 Ga0495609_0028851
478 Ga0495645_0037210
479 Ga0495633_0030170
480 Ga0495667_0029854
481 Ga0495656_0064531
482 Ga0495634_0016455
483 Ga0495634_0120979
484 Ga0495625_0001174
485 Ga0495635_0014938
486 Ga0495635_0017458
487 Ga0495588_0001845
488 Ga0495588_0099559
489 Ga0495657_0001939
490 Ga0495657_0004659
491 Ga0495599_0026052
492 Ga0495623_0020608
493 Ga0495646_0057670
494 Ga0495613_0001614
495 Ga0495613_0005318
496 Ga0495613_0005590
497 Ga0495613_0009294
498 Ga0495613_0021405
499 Ga0495649_0019626
500 Ga0495589_0010704
501 Ga0495589_0018221
502 Ga0495589_0027897
503 Ga0495589_0043352
504 Ga0495581_0013557
505 Ga0495581_0016337
506 Ga0495581_0030340
507 Ga0495604_0000463
508 Ga0495604_0004076
509 Ga0495604_0021384
510 Ga0495604_0025458
511 Ga0495636_0004318
512 Ga0495636_0005984
513 Ga0495676_0009907
514 Ga0495676_0019531
515 Ga0495676_0032744
516 Ga0495676_0039512
517 Ga0495676_0094999
518 Ga0495683_0076464
519 Ga0495687_001642
520 Ga0495687_003053
521 Ga0495675_0007633
522 Ga0495675_0009883
523 Ga0495675_0013979
524 Ga0495685_004669
525 Ga0495685_023715
526 Ga0495681_0006773
527 Ga0495681_0020500
528 Ga0495681_0040841
529 Ga0495593_0001223
530 Ga0495593_0015162
531 Ga0495602_0037919
532 Ga0495614_0003926
533 Ga0495614_0039366
534 Ga0495614_0044411
535 Ga0495626_0000075
536 Ga0496109_0007455
537 Ga0496110_0273773
538 Ga0496112_0284013
539 Ga0496126_0020050
540 Ga0501031_0018210
541 Ga0501031_0025127
542 Ga0501032_0001869
543 Ga0501032_0027443
544 Ga0501033_0004571
545 Ga0501034_0003558
546 Ga0501034_0031248
547 Ga0501034_0086714
548 Ga0501034_0088772
549 Ga0501034_0089088
550 Ga0501036_0004814
551 Ga0501036_0148422
552 Ga0501037_0003166
553 Ga0501037_0027647
554 Ga0501037_0028372
555 Ga0501038_0000246
556 Ga0501038_0014445
557 Ga0501038_0068776
558 Ga0501039_0060355
559 Ga0501039_0194971
560 Ga0501042_0029100
561 Ga0501043_0004495
562 Ga0501043_0021453
563 Ga0501043_0022266
564 Ga0501046_0007718
565 Ga0501046_0108014
566 Ga0501047_0008296
567 Ga0501047_0040663
568 Ga0501047_0049148
569 Ga0501047_0065026
570 Ga0501047_0143540
571 Ga0501048_0053126
572 Ga0501068_0010215
573 Ga0501069_0022825
574 Ga0501069_0111566
575 Ga0501070_0026960
576 Ga0501072_0118797
577 Ga0501074_0042910
578 Ga0501079_0004106
579 Ga0501080_0206013
580 Ga0501083_0002699
581 Ga0501035_0000169
582 Ga0501035_0006688
583 Ga0501035_0049943
584 Ga0501035_0051259
585 Ga0501035_0099243
586 Ga0501044_0000257
587 Ga0501044_0001425
588 Ga0501044_0030580
589 Ga0501044_0051871
590 Ga0501044_0386694
591 nmdc:mga06z11_2659_c1
592 nmdc:mga06r32_223646_c1
593 Ga0495601_0064079
594 Ga0495619_0028247
595 Ga0500561_0000718
596 Ga0500573_0051274
597 Ga0500633_0002506
598 Ga0501082_0005118
599 Ga0466962_0010185
600 Ga0466962_0033367
601 2508677593
602 2515721645
603 2516085920
604 2547405720
605 2548696976
606 2585306575
607 2585314007
608 2616699034
609 2643762151
610 2643901848
611 2644016079
612 2644179563
613 2644263426
614 2644407994
615 2644459071
616 2644512635
617 2644632319
618 2671837953
619 2676490130
620 2689961854
621 2739203679
622 2753072796
623 2753264631
624 2768642193
625 2774856109
626 2784586565
627 2785346396
628 2785366669
629 2786667743
630 2808918002
631 2809230079
632 2812357421
633 2812483185
634 2819697610
635 2819745387
636 2832006327
637 2855683572
638 2858907049
639 2861526180
640 2862284030
641 2862391767
642 2863407967
643 2866067086
644 2867325194
645 2867437170
646 2870723302
647 2873158629
648 2877683880
649 2884694048
650 2895448117
651 2912724124
652 2918508546
653 2919472317
654 2946046733
655 2946068439
656 2946077815
657 2947228476
658 2954389162
659 2954673883
660 2954690108
661 2954699914
662 2954702285
663 2954718789
664 2954728759
665 2954733051
666 2954747657
667 2954751932
668 2954766781
669 2966600314
670 2995471510
671 2997455639
672 2997601339
673 3006393553
674 3006494195
675 8001783410
676 8008560697
677 8008581781
678 8023631338
679 8025531938
680 8048407331
681 8056830907
682 8057573247

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

125

184

0.83

PF07728

AAA_5

AAA domain (dynein-related subfamily)

63

196

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
4bs1-assembly1.cif.gz_B-1 mub is an aaaplus atpase that forms helical filaments to control target selection for dna transposition 0.618 34 168
7xbk-assembly1.cif.gz_B structure and mechanism of a mitochondrial aaa+ disaggregase clpb 0.5843 19 167
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.5593 21 289
5j1t-assembly1.cif.gz_A torsinadeltae-lull1 complex, h. sapiens, bound to vhh-bs2 0.5573 42 169
6gen-assembly1.cif.gz_V chromatin remodeller-nucleosome complex at 4.5 a resolution. 0.5556 35 202
ID Description Score Start End Superfamily
af_Q9C0G6_3530_3655_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7516 50 192 3.40.50.300
af_M9PHH0_754_932_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7442 41 200 3.40.50.300
af_Q2G2J8_10_182_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7341 39 202 3.40.50.300
af_Q9NU22_1063_1233_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7291 38 202 3.40.50.300
af_Q650Y8_272_396_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7225 52 192 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A6I5CGU9-F1-model_v4 AAA family ATPase 0.9564 218 296
AF-A0A6I5CKN2-F1-model_v4 AAA family ATPase 0.9293 172 289
AF-A0A6I5CGU9-F1-model_v4 AAA family ATPase 0.9226 218 296
AF-A0A6I5CKN2-F1-model_v4 AAA family ATPase 0.9219 172 289
AF-A0A6G3WLP2-F1-model_v4 Sigma-54 factor interaction domain-containing protein 0.9207 95 370 GO:0005524
GO:0006355

Map