F414767

General Info

Members Datasets Scaffolds Average Seq Length
341 159 682 243

Family's Representative Sequence

Representative Sequence 3300025921|Ga0207652_10001564|Ga0207652_100015649
Length 282
Sequence MDVIVRLPQVAEPVHADGVTWIVHNFDPSSPERFPWPMREVRLFVEIPLAPGKDLPLPRGAAQHALRVLRLKTGDLVTLFNGDGRQYPSRLVAADPRAARIHVEAAEAPAHESPLRITLIQSLARGEKMDWVIQKATELGATRILPVTSERSEVRLDGARSERRLDHWRAIAIAACEQCGRNVLPEISAPYSLEACLAAHPQAGAEVRWVLHPGGTARMRNIEPAAADVVLAVGPEGGFSDNDLAALRQAGFDALALGPRILRTETAGLAAMAALQAVQGDL

Samples

Sample ID Description Type Environment
1 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
31 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
45 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
48 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
53 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
54 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
55 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
62 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
96 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
97 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
100 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
102 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
103 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
104 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
105 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
106 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
107 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
108 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
109 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
110 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
111 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
112 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
113 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
118 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
119 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
120 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
121 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
124 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
125 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
126 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
130 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
131 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
132 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
133 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
149 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
150 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
151 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
154 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
158 2929297113 Heliophilum fasciatum MTM Isolate Rhizosphere
159 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.6
Metatranscriptomes 3.81
Isolates 0.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.29
Nodule 0.59
Rhizoplane 2.93
Rhizosphere 89.15
Stem 0
Stem Tuber 0
Unclassified 6.45

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207652_10001564 3300025921 Bacteria 20131
2 JGI24741J21665_1000533 3300001915 Bacteria 11627
3 JGI24741J21665_1001442 3300001915 Bacteria 6806
4 JGI24741J21665_1003571 3300001915 Bacteria 3674
5 JGI24740J21852_10002346 3300001979 Bacteria 8615
6 JGI24740J21852_10029457 3300001979 Bacteria 1802
7 rootH1_10108480 3300003316 Bacteria 2707
8 rootH2_10327388 3300003320 Bacteria 1267
9 rootL2_10061109 3300003322 Bacteria 1817
10 rootL2_10256695 3300003322 Bacteria 1243
11 rootH1_10082607 3300003323 Bacteria 2103
12 Ga0065715_10026227 3300005293 Bacteria 3121
13 Ga0065715_10288277 3300005293 Bacteria 1069
14 Ga0070658_10023700 3300005327 Bacteria 4922
15 Ga0070658_10105827 3300005327 Bacteria 2327
16 Ga0070683_100136789 3300005329 Bacteria 2320
17 Ga0070683_100160740 3300005329 Bacteria 2131
18 Ga0070666_10172751 3300005335 Unclassified 1514
19 Ga0070680_100003199 3300005336 Bacteria 12174
20 Ga0070680_100031415 3300005336 Bacteria 4270
21 Ga0070680_100048648 3300005336 Bacteria 3456
22 Ga0070680_100074305 3300005336 Unclassified 2797
23 Ga0070680_100106604 3300005336 Bacteria 2330
24 Ga0070680_100156240 3300005336 Bacteria 1916
25 Ga0070682_100314048 3300005337 Bacteria 1155
26 Ga0070660_100097124 3300005339 Bacteria 2330
27 Ga0070660_100097371 3300005339 Bacteria 2327
28 Ga0070660_100260267 3300005339 Bacteria 1416
29 Ga0070691_10010810 3300005341 Bacteria 4164
30 Ga0070691_10036048 3300005341 Bacteria 2330
31 Ga0070691_10039403 3300005341 Bacteria 2232
32 Ga0070687_100012182 3300005343 Bacteria 3788
33 Ga0070661_100005231 3300005344 Bacteria 8936
34 Ga0070661_100082907 3300005344 Bacteria 2368
35 Ga0070661_100086309 3300005344 Bacteria 2320
36 Ga0070692_10005989 3300005345 Bacteria 5239
37 Ga0070692_10019101 3300005345 Bacteria 3305
38 Ga0070692_10120532 3300005345 Bacteria 1462
39 Ga0070659_100054741 3300005366 Bacteria 3143
40 Ga0070659_100142126 3300005366 Bacteria 1954
41 Ga0070667_100136644 3300005367 Bacteria 2144
42 Ga0070714_100114822 3300005435 Bacteria 2389
43 Ga0070713_100116470 3300005436 Bacteria 2337
44 Ga0070708_100396643 3300005445 Bacteria 1301
45 Ga0070663_100047782 3300005455 Bacteria 3032
46 Ga0070663_100097258 3300005455 Bacteria 2191
47 Ga0070663_100102258 3300005455 Bacteria 2140
48 Ga0070663_100114211 3300005455 Bacteria 2033
49 Ga0070663_100128055 3300005455 Bacteria 1925
50 Ga0070662_100026060 3300005457 Bacteria 4045
51 Ga0070681_10000006 3300005458 Bacteria 169066
52 Ga0070681_10000721 3300005458 Bacteria 27370
53 Ga0070681_10000934 3300005458 Bacteria 24585
54 Ga0070681_10037336 3300005458 Bacteria 4875
55 Ga0070681_10142042 3300005458 Bacteria 2330
56 Ga0070681_10577947 3300005458 Bacteria 1037
57 Ga0070679_100000417 3300005530 Bacteria 36272
58 Ga0070679_100009935 3300005530 Bacteria 9008
59 Ga0070679_100268820 3300005530 Bacteria 1659
60 Ga0070684_100078641 3300005535 Bacteria 2914
61 Ga0070684_100326696 3300005535 Bacteria 1409
62 Ga0068853_100075670 3300005539 Bacteria 2938
63 Ga0068853_100116857 3300005539 Bacteria 2375
64 Ga0070696_100023467 3300005546 Bacteria 4193
65 Ga0070696_100029578 3300005546 Bacteria 3745
66 Ga0070696_100080561 3300005546 Bacteria 2305
67 Ga0070693_100066711 3300005547 Unclassified 2107
68 Ga0070693_100253009 3300005547 Unclassified 1168
69 Ga0070665_100028765 3300005548 Bacteria 5596
70 Ga0070665_100297183 3300005548 Bacteria 1617
71 Ga0068855_100177878 3300005563 Bacteria 2406
72 Ga0068855_100984189 3300005563 Bacteria 887
73 Ga0068857_100023852 3300005577 Bacteria 5385
74 Ga0068857_100126166 3300005577 Bacteria 2306
75 Ga0068854_100006591 3300005578 Bacteria 7394
76 Ga0068854_100006620 3300005578 Bacteria 7382
77 Ga0068854_100264903 3300005578 Bacteria 1377
78 Ga0068856_100151576 3300005614 Bacteria 2327
79 Ga0068852_100128160 3300005616 Bacteria 2333
80 Ga0068852_100298531 3300005616 Bacteria 1558
81 Ga0068851_10019818 3300005834 Bacteria 3251
82 Ga0068863_100003369 3300005841 Bacteria 15775
83 Ga0068858_100002584 3300005842 Bacteria 18233
84 Ga0068858_100185036 3300005842 Bacteria 1967
85 Ga0068858_100356872 3300005842 Unclassified 1401
86 Ga0068860_100001811 3300005843 Bacteria 22738
87 Ga0068862_100030055 3300005844 Bacteria 4578
88 Ga0075429_100627106 3300006880 Bacteria 942
89 Ga0079104_1034508 3300006946 Bacteria 1228
90 Ga0105240_10040649 3300009093 Bacteria 5944
91 Ga0105240_10048978 3300009093 Bacteria 5337
92 Ga0105240_10121429 3300009093 Bacteria 3145
93 Ga0105240_10347488 3300009093 Bacteria 1683
94 Ga0105240_10554005 3300009093 Bacteria 1272
95 Ga0105247_10031789 3300009101 Bacteria 3205
96 Ga0105241_10130442 3300009174 Bacteria 2034
97 Ga0105237_10089379 3300009545 Bacteria 3070
98 Ga0105237_10090860 3300009545 Bacteria 3042
99 Ga0105237_10175078 3300009545 Unclassified 2146
100 Ga0105237_10503332 3300009545 Unclassified 1218
101 Ga0105238_10075879 3300009551 Bacteria 3353
102 Ga0105238_10246939 3300009551 Bacteria 1763
103 Ga0105238_10454990 3300009551 Bacteria 1277
104 Ga0105249_10064321 3300009553 Unclassified 3372
105 Ga0157373_10008828 3300013100 Bacteria 7467
106 Ga0157373_10023488 3300013100 Bacteria 4469
107 Ga0157373_10114787 3300013100 Bacteria 1894
108 Ga0157373_10424480 3300013100 Bacteria 955
109 Ga0157371_10011592 3300013102 Bacteria 6774
110 Ga0157371_10073666 3300013102 Bacteria 2418
111 Ga0157371_10076131 3300013102 Bacteria 2376
112 Ga0157371_10135934 3300013102 Bacteria 1750
113 Ga0157370_10003325 3300013104 Bacteria 18950
114 Ga0157370_10023075 3300013104 Bacteria 6185
115 Ga0157370_10061790 3300013104 Bacteria 3554
116 Ga0157370_10080828 3300013104 Bacteria 3060
117 Ga0157370_10090362 3300013104 Bacteria 2876
118 Ga0157370_10122179 3300013104 Bacteria 2432
119 Ga0157370_10204196 3300013104 Bacteria 1833
120 Ga0157370_10742214 3300013104 Bacteria 895
121 Ga0157369_10003442 3300013105 Bacteria 18769
122 Ga0157369_10180306 3300013105 Bacteria 2222
123 Ga0163162_10101093 3300013306 Unclassified 2975
124 Ga0157372_10002979 3300013307 Bacteria 18241
125 Ga0157372_10034389 3300013307 Bacteria 5571
126 Ga0157372_10114713 3300013307 Bacteria 3088
127 Ga0157372_10188189 3300013307 Bacteria 2390
128 Ga0157372_10196475 3300013307 Bacteria 2336
129 Ga0157372_10258205 3300013307 Bacteria 2023
130 Ga0157379_10591388 3300014968 Bacteria 1035
131 Ga0197907_10656744 3300020069 Bacteria 1239
132 Ga0206356_10149079 3300020070 Bacteria 2005
133 Ga0206356_10193760 3300020070 Bacteria 2389
134 Ga0206356_11638376 3300020070 Bacteria 1507
135 Ga0206354_10207202 3300020081 Bacteria 9094
136 Ga0206354_10570814 3300020081 Bacteria 4640
137 Ga0206354_10764223 3300020081 Bacteria 1600
138 Ga0206353_10153298 3300020082 Bacteria 2170
139 Ga0206353_10481140 3300020082 Bacteria 1458
140 Ga0206353_12019393 3300020082 Bacteria 5998
141 Ga0154015_1237329 3300020610 Bacteria 1901
142 Ga0154015_1298359 3300020610 Bacteria 979
143 Ga0224712_10015490 3300022467 Bacteria 2482
144 Ga0207656_10034082 3300025321 Bacteria 2124
145 Ga0207710_10145149 3300025900 Unclassified 1148
146 Ga0207647_10001647 3300025904 Bacteria 17178
147 Ga0207647_10003903 3300025904 Bacteria 11137
148 Ga0207705_10001377 3300025909 Bacteria 19399
149 Ga0207705_10004416 3300025909 Bacteria 10632
150 Ga0207705_10057303 3300025909 Bacteria 2810
151 Ga0207705_10110331 3300025909 Bacteria 2032
152 Ga0207705_10146082 3300025909 Bacteria 1769
153 Ga0207654_10155928 3300025911 Bacteria 1470
154 Ga0207707_10000179 3300025912 Bacteria 66039
155 Ga0207707_10000370 3300025912 Bacteria 47164
156 Ga0207707_10000529 3300025912 Bacteria 39088
157 Ga0207707_10000812 3300025912 Bacteria 30590
158 Ga0207707_10002026 3300025912 Bacteria 18400
159 Ga0207707_10125297 3300025912 Unclassified 2247
160 Ga0207695_10002955 3300025913 Bacteria 24524
161 Ga0207695_10016116 3300025913 Bacteria 8767
162 Ga0207695_10036378 3300025913 Bacteria 5323
163 Ga0207695_10444089 3300025913 Bacteria 1180
164 Ga0207671_10195991 3300025914 Unclassified 1576
165 Ga0207660_10000747 3300025917 Bacteria 21615
166 Ga0207660_10025074 3300025917 Bacteria 4045
167 Ga0207660_10028863 3300025917 Bacteria 3800
168 Ga0207660_10034986 3300025917 Bacteria 3485
169 Ga0207660_10077902 3300025917 Bacteria 2428
170 Ga0207660_10277764 3300025917 Unclassified 1328
171 Ga0207662_10018206 3300025918 Bacteria 3981
172 Ga0207657_10004478 3300025919 Bacteria 14774
173 Ga0207657_10109123 3300025919 Bacteria 2288
174 Ga0207657_10109316 3300025919 Bacteria 2285
175 Ga0207649_10019763 3300025920 Bacteria 3855
176 Ga0207649_10053355 3300025920 Bacteria 2512
177 Ga0207652_10000442 3300025921 Bacteria 42938
178 Ga0207652_10000894 3300025921 Bacteria 28219
179 Ga0207652_10001820 3300025921 Bacteria 18481
180 Ga0207652_10005269 3300025921 Bacteria 10497
181 Ga0207652_10033621 3300025921 Bacteria 4318
182 Ga0207694_10056445 3300025924 Bacteria 3050
183 Ga0207690_10008421 3300025932 Bacteria 6123
184 Ga0207690_10020705 3300025932 Bacteria 4068
185 Ga0207690_10130174 3300025932 Bacteria 1840
186 Ga0207706_10004745 3300025933 Bacteria 12726
187 Ga0207661_10014933 3300025944 Bacteria 5701
188 Ga0207661_10039618 3300025944 Bacteria 3699
189 Ga0207661_10156964 3300025944 Bacteria 1971
190 Ga0207679_10242362 3300025945 Bacteria 1528
191 Ga0207667_10001475 3300025949 Bacteria 29510
192 Ga0207667_10004505 3300025949 Bacteria 17070
193 Ga0207667_10009714 3300025949 Bacteria 11314
194 Ga0207667_10227377 3300025949 Bacteria 1911
195 Ga0207667_10460018 3300025949 Bacteria 1292
196 Ga0207712_10121025 3300025961 Bacteria 1980
197 Ga0207640_10000522 3300025981 Bacteria 23181
198 Ga0207640_10000593 3300025981 Bacteria 21569
199 Ga0207640_10000941 3300025981 Bacteria 16250
200 Ga0207640_10009766 3300025981 Bacteria 5380
201 Ga0207703_10003091 3300026035 Bacteria 14076
202 Ga0207703_10094735 3300026035 Bacteria 2518
203 Ga0207639_10001978 3300026041 Bacteria 13788
204 Ga0207639_10041556 3300026041 Bacteria 3441
205 Ga0207678_10003548 3300026067 Bacteria 14030
206 Ga0207678_10050395 3300026067 Bacteria 3597
207 Ga0207678_10115639 3300026067 Bacteria 2288
208 Ga0207678_10115937 3300026067 Bacteria 2285
209 Ga0207702_10001167 3300026078 Bacteria 26817
210 Ga0207641_10006840 3300026088 Bacteria 9547
211 Ga0207674_10095050 3300026116 Bacteria 2967
212 Ga0207674_10166880 3300026116 Bacteria 2156
213 Ga0207698_10001252 3300026142 Bacteria 14849
214 Ga0207698_10108420 3300026142 Bacteria 2321
215 Ga0207698_10631226 3300026142 Bacteria 1059
216 Ga0209281_1005004 3300027111 Bacteria 3787
217 Ga0268266_10012370 3300028379 Bacteria 7377
218 Ga0268265_10007691 3300028380 Bacteria 7271
219 Ga0268264_10001047 3300028381 Bacteria 27587
220 Ga0316177_1062268 3300030731 Bacteria 2128
221 Ga0265331_10049501 3300031250 Bacteria 2018
222 Ga0316576_10003421 3300031727 Bacteria 9287
223 Ga0316576_10026749 3300031727 Bacteria 4051
224 Ga0316576_10148590 3300031727 Bacteria 1766
225 Ga0307409_101014052 3300031995 Bacteria 849
226 Ga0307510_10000023 3300033180 Bacteria 155640
227 Ga0373936_0032068 3300035113 Unclassified 2077
228 Ga0373957_0078690 3300035120 Bacteria 1299
229 Ga0316574_0024933 3300035398 Bacteria 3585
230 Ga0316574_0080112 3300035398 Bacteria 2072
231 Ga0373937_0367496 3300036401 Bacteria 1364
232 Ga0316582_0087795 3300036647 Bacteria 2042
233 Ga0316584_0067661 3300036712 Bacteria 2677
234 Ga0316584_0072905 3300036712 Bacteria 2573
235 Ga0316584_0132445 3300036712 Bacteria 1862
236 Ga0316584_0306824 3300036712 Bacteria 1148
237 Ga0395899_0063586 3300037312 Bacteria 2714
238 Ga0395899_0384739 3300037312 Bacteria 932
239 Ga0395899_0455047 3300037312 Bacteria 837
240 Ga0395900_0000059 3300037418 Bacteria 205996
241 Ga0395900_0012679 3300037418 Bacteria 8618
242 Ga0395900_0164604 3300037418 Bacteria 2260
243 Ga0395900_0748867 3300037418 Unclassified 907
244 Ga0395898_0030552 3300037466 Bacteria 5390
245 Ga0395898_0304510 3300037466 Bacteria 1520
246 Ga0395898_0514105 3300037466 Unclassified 1139
247 Ga0395898_0762612 3300037466 Bacteria 908
248 Ga0395901_0383793 3300038443 Bacteria 1445
249 Ga0395901_0457518 3300038443 Bacteria 1304
250 Ga0451577_0002906 3300042876 Bacteria 19660
251 Ga0451577_0014700 3300042876 Bacteria 7291
252 Ga0466965_0321296 3300044683 Bacteria 843
253 Ga0466966_0096113 3300044684 Bacteria 1835
254 Ga0466966_0277125 3300044684 Bacteria 1009
255 Ga0466963_0508384 3300044694 Unclassified 851
256 Ga0466957_0023847 3300044842 Bacteria 3619
257 Ga0466959_0022419 3300045049 Bacteria 4669
258 Ga0466959_0148077 3300045049 Bacteria 1656
259 Ga0466959_0199071 3300045049 Bacteria 1395
260 Ga0451576_0007290 3300045051 Bacteria 13284
261 Ga0451576_0007610 3300045051 Bacteria 12897
262 Ga0495598_0052945 3300046537 Bacteria 1228
263 Ga0495621_0026694 3300046539 Bacteria 1951
264 Ga0495656_0377832 3300046615 Bacteria 738
265 Ga0495659_0035455 3300046664 Bacteria 1759
266 Ga0495658_0034483 3300046683 Bacteria 2778
267 Ga0495658_0359809 3300046683 Bacteria 925
268 Ga0495687_025322 3300047443 Bacteria 2807
269 Ga0496101_0622443 3300048904 Bacteria 853
270 Ga0496102_0051963 3300048905 Bacteria 3733
271 Ga0496102_0071748 3300048905 Bacteria 3180
272 Ga0496102_0623682 3300048905 Bacteria 1001
273 Ga0496104_0131216 3300048907 Bacteria 2407
274 Ga0496105_0100828 3300048908 Bacteria 2384
275 Ga0496105_0160661 3300048908 Unclassified 1845
276 Ga0496109_0776630 3300048912 Bacteria 896
277 Ga0496114_0212782 3300048917 Bacteria 1696
278 Ga0496114_0814143 3300048917 Bacteria 813
279 Ga0496116_0064282 3300048919 Bacteria 2359
280 Ga0496117_0001017 3300048920 Bacteria 42848
281 Ga0496118_0001065 3300048921 Bacteria 42851
282 Ga0496119_0002411 3300048922 Bacteria 20519
283 Ga0496119_0010502 3300048922 Bacteria 7783
284 Ga0496119_0288416 3300048922 Bacteria 813
285 Ga0496120_0000202 3300048923 Bacteria 102418
286 Ga0496120_0052848 3300048923 Unclassified 2312
287 Ga0496120_0170839 3300048923 Unclassified 1075
288 Ga0496121_0035791 3300048924 Bacteria 4439
289 Ga0496121_0160655 3300048924 Unclassified 1643
290 Ga0496122_0002722 3300048925 Bacteria 24525
291 Ga0496123_0001781 3300048926 Bacteria 28388
292 Ga0496124_0115862 3300048927 Bacteria 2149
293 Ga0496125_0033418 3300048928 Bacteria 4552
294 Ga0496125_0053039 3300048928 Bacteria 3329
295 Ga0496126_0086046 3300048929 Unclassified 2770
296 Ga0501032_0173060 3300049569 Bacteria 1415
297 Ga0501032_0245141 3300049569 Bacteria 1164
298 Ga0501032_0247240 3300049569 Bacteria 1158
299 Ga0501033_0150783 3300049570 Bacteria 1677
300 Ga0501036_0407195 3300049572 Bacteria 1134
301 Ga0501037_0046537 3300049573 Bacteria 3181
302 Ga0501037_0113938 3300049573 Bacteria 1946
303 Ga0501038_0065503 3300049574 Bacteria 3095
304 Ga0501038_0336053 3300049574 Bacteria 1179
305 Ga0501047_0018565 3300049581 Bacteria 6667
306 Ga0501047_0041271 3300049581 Bacteria 4459
307 Ga0501047_0098031 3300049581 Bacteria 2810
308 Ga0501047_0188673 3300049581 Bacteria 1926
309 Ga0501069_0040240 3300049585 Bacteria 2583
310 Ga0501069_0336219 3300049585 Bacteria 889
311 Ga0501070_0003080 3300049586 Bacteria 14515
312 Ga0501070_0005109 3300049586 Bacteria 11187
313 Ga0501070_0005513 3300049586 Bacteria 10794
314 Ga0501070_0009830 3300049586 Bacteria 8087
315 Ga0501070_0037564 3300049586 Bacteria 4042
316 Ga0501070_0072157 3300049586 Bacteria 2858
317 Ga0501070_0196404 3300049586 Bacteria 1657
318 Ga0501071_0011041 3300049587 Bacteria 6067
319 Ga0501073_0005479 3300049589 Bacteria 9511
320 Ga0501073_0032289 3300049589 Bacteria 3732
321 Ga0501074_0000121 3300049590 Bacteria 39707
322 Ga0501074_0007458 3300049590 Bacteria 7909
323 Ga0501074_0007706 3300049590 Bacteria 7798
324 Ga0501074_0063453 3300049590 Bacteria 2661
325 Ga0501074_0373213 3300049590 Bacteria 1012
326 Ga0501077_0003192 3300049593 Bacteria 9878
327 Ga0501079_0105633 3300049741 Bacteria 2185
328 Ga0501079_0286779 3300049741 Bacteria 1287
329 Ga0501080_0130076 3300049742 Bacteria 2330
330 Ga0501035_0010404 3300049822 Bacteria 8623
331 Ga0501035_0010772 3300049822 Bacteria 8467
332 Ga0501035_0024226 3300049822 Bacteria 5566
333 Ga0501035_0120733 3300049822 Bacteria 2291
334 Ga0501044_0009283 3300049823 Bacteria 10738
335 Ga0501044_0041784 3300049823 Bacteria 4772
336 Ga0501044_0049238 3300049823 Bacteria 4350
337 Ga0501044_0273741 3300049823 Bacteria 1623
338 nmdc:mga08y16_297361_c1 3300050511 Bacteria 1664
339 Ga0500556_0000763 3300053104 Bacteria 19092
340 2929298696 2929297113 Bacteria 3141306
341 2987608432 2987605356 Bacteria 4187822
342 Ga0207652_10001564
343 JGI24741J21665_1000533
344 JGI24741J21665_1001442
345 JGI24741J21665_1003571
346 JGI24740J21852_10002346
347 JGI24740J21852_10029457
348 rootH1_10108480
349 rootH2_10327388
350 rootL2_10061109
351 rootL2_10256695
352 rootH1_10082607
353 Ga0065715_10026227
354 Ga0065715_10288277
355 Ga0070658_10023700
356 Ga0070658_10105827
357 Ga0070683_100136789
358 Ga0070683_100160740
359 Ga0070666_10172751
360 Ga0070680_100003199
361 Ga0070680_100031415
362 Ga0070680_100048648
363 Ga0070680_100074305
364 Ga0070680_100106604
365 Ga0070680_100156240
366 Ga0070682_100314048
367 Ga0070660_100097124
368 Ga0070660_100097371
369 Ga0070660_100260267
370 Ga0070691_10010810
371 Ga0070691_10036048
372 Ga0070691_10039403
373 Ga0070687_100012182
374 Ga0070661_100005231
375 Ga0070661_100082907
376 Ga0070661_100086309
377 Ga0070692_10005989
378 Ga0070692_10019101
379 Ga0070692_10120532
380 Ga0070659_100054741
381 Ga0070659_100142126
382 Ga0070667_100136644
383 Ga0070714_100114822
384 Ga0070713_100116470
385 Ga0070708_100396643
386 Ga0070663_100047782
387 Ga0070663_100097258
388 Ga0070663_100102258
389 Ga0070663_100114211
390 Ga0070663_100128055
391 Ga0070662_100026060
392 Ga0070681_10000006
393 Ga0070681_10000721
394 Ga0070681_10000934
395 Ga0070681_10037336
396 Ga0070681_10142042
397 Ga0070681_10577947
398 Ga0070679_100000417
399 Ga0070679_100009935
400 Ga0070679_100268820
401 Ga0070684_100078641
402 Ga0070684_100326696
403 Ga0068853_100075670
404 Ga0068853_100116857
405 Ga0070696_100023467
406 Ga0070696_100029578
407 Ga0070696_100080561
408 Ga0070693_100066711
409 Ga0070693_100253009
410 Ga0070665_100028765
411 Ga0070665_100297183
412 Ga0068855_100177878
413 Ga0068855_100984189
414 Ga0068857_100023852
415 Ga0068857_100126166
416 Ga0068854_100006591
417 Ga0068854_100006620
418 Ga0068854_100264903
419 Ga0068856_100151576
420 Ga0068852_100128160
421 Ga0068852_100298531
422 Ga0068851_10019818
423 Ga0068863_100003369
424 Ga0068858_100002584
425 Ga0068858_100185036
426 Ga0068858_100356872
427 Ga0068860_100001811
428 Ga0068862_100030055
429 Ga0075429_100627106
430 Ga0079104_1034508
431 Ga0105240_10040649
432 Ga0105240_10048978
433 Ga0105240_10121429
434 Ga0105240_10347488
435 Ga0105240_10554005
436 Ga0105247_10031789
437 Ga0105241_10130442
438 Ga0105237_10089379
439 Ga0105237_10090860
440 Ga0105237_10175078
441 Ga0105237_10503332
442 Ga0105238_10075879
443 Ga0105238_10246939
444 Ga0105238_10454990
445 Ga0105249_10064321
446 Ga0157373_10008828
447 Ga0157373_10023488
448 Ga0157373_10114787
449 Ga0157373_10424480
450 Ga0157371_10011592
451 Ga0157371_10073666
452 Ga0157371_10076131
453 Ga0157371_10135934
454 Ga0157370_10003325
455 Ga0157370_10023075
456 Ga0157370_10061790
457 Ga0157370_10080828
458 Ga0157370_10090362
459 Ga0157370_10122179
460 Ga0157370_10204196
461 Ga0157370_10742214
462 Ga0157369_10003442
463 Ga0157369_10180306
464 Ga0163162_10101093
465 Ga0157372_10002979
466 Ga0157372_10034389
467 Ga0157372_10114713
468 Ga0157372_10188189
469 Ga0157372_10196475
470 Ga0157372_10258205
471 Ga0157379_10591388
472 Ga0197907_10656744
473 Ga0206356_10149079
474 Ga0206356_10193760
475 Ga0206356_11638376
476 Ga0206354_10207202
477 Ga0206354_10570814
478 Ga0206354_10764223
479 Ga0206353_10153298
480 Ga0206353_10481140
481 Ga0206353_12019393
482 Ga0154015_1237329
483 Ga0154015_1298359
484 Ga0224712_10015490
485 Ga0207656_10034082
486 Ga0207710_10145149
487 Ga0207647_10001647
488 Ga0207647_10003903
489 Ga0207705_10001377
490 Ga0207705_10004416
491 Ga0207705_10057303
492 Ga0207705_10110331
493 Ga0207705_10146082
494 Ga0207654_10155928
495 Ga0207707_10000179
496 Ga0207707_10000370
497 Ga0207707_10000529
498 Ga0207707_10000812
499 Ga0207707_10002026
500 Ga0207707_10125297
501 Ga0207695_10002955
502 Ga0207695_10016116
503 Ga0207695_10036378
504 Ga0207695_10444089
505 Ga0207671_10195991
506 Ga0207660_10000747
507 Ga0207660_10025074
508 Ga0207660_10028863
509 Ga0207660_10034986
510 Ga0207660_10077902
511 Ga0207660_10277764
512 Ga0207662_10018206
513 Ga0207657_10004478
514 Ga0207657_10109123
515 Ga0207657_10109316
516 Ga0207649_10019763
517 Ga0207649_10053355
518 Ga0207652_10000442
519 Ga0207652_10000894
520 Ga0207652_10001820
521 Ga0207652_10005269
522 Ga0207652_10033621
523 Ga0207694_10056445
524 Ga0207690_10008421
525 Ga0207690_10020705
526 Ga0207690_10130174
527 Ga0207706_10004745
528 Ga0207661_10014933
529 Ga0207661_10039618
530 Ga0207661_10156964
531 Ga0207679_10242362
532 Ga0207667_10001475
533 Ga0207667_10004505
534 Ga0207667_10009714
535 Ga0207667_10227377
536 Ga0207667_10460018
537 Ga0207712_10121025
538 Ga0207640_10000522
539 Ga0207640_10000593
540 Ga0207640_10000941
541 Ga0207640_10009766
542 Ga0207703_10003091
543 Ga0207703_10094735
544 Ga0207639_10001978
545 Ga0207639_10041556
546 Ga0207678_10003548
547 Ga0207678_10050395
548 Ga0207678_10115639
549 Ga0207678_10115937
550 Ga0207702_10001167
551 Ga0207641_10006840
552 Ga0207674_10095050
553 Ga0207674_10166880
554 Ga0207698_10001252
555 Ga0207698_10108420
556 Ga0207698_10631226
557 Ga0209281_1005004
558 Ga0268266_10012370
559 Ga0268265_10007691
560 Ga0268264_10001047
561 Ga0316177_1062268
562 Ga0265331_10049501
563 Ga0316576_10003421
564 Ga0316576_10026749
565 Ga0316576_10148590
566 Ga0307409_101014052
567 Ga0307510_10000023
568 Ga0373936_0032068
569 Ga0373957_0078690
570 Ga0316574_0024933
571 Ga0316574_0080112
572 Ga0373937_0367496
573 Ga0316582_0087795
574 Ga0316584_0067661
575 Ga0316584_0072905
576 Ga0316584_0132445
577 Ga0316584_0306824
578 Ga0395899_0063586
579 Ga0395899_0384739
580 Ga0395899_0455047
581 Ga0395900_0000059
582 Ga0395900_0012679
583 Ga0395900_0164604
584 Ga0395900_0748867
585 Ga0395898_0030552
586 Ga0395898_0304510
587 Ga0395898_0514105
588 Ga0395898_0762612
589 Ga0395901_0383793
590 Ga0395901_0457518
591 Ga0451577_0002906
592 Ga0451577_0014700
593 Ga0466965_0321296
594 Ga0466966_0096113
595 Ga0466966_0277125
596 Ga0466963_0508384
597 Ga0466957_0023847
598 Ga0466959_0022419
599 Ga0466959_0148077
600 Ga0466959_0199071
601 Ga0451576_0007290
602 Ga0451576_0007610
603 Ga0495598_0052945
604 Ga0495621_0026694
605 Ga0495656_0377832
606 Ga0495659_0035455
607 Ga0495658_0034483
608 Ga0495658_0359809
609 Ga0495687_025322
610 Ga0496101_0622443
611 Ga0496102_0051963
612 Ga0496102_0071748
613 Ga0496102_0623682
614 Ga0496104_0131216
615 Ga0496105_0100828
616 Ga0496105_0160661
617 Ga0496109_0776630
618 Ga0496114_0212782
619 Ga0496114_0814143
620 Ga0496116_0064282
621 Ga0496117_0001017
622 Ga0496118_0001065
623 Ga0496119_0002411
624 Ga0496119_0010502
625 Ga0496119_0288416
626 Ga0496120_0000202
627 Ga0496120_0052848
628 Ga0496120_0170839
629 Ga0496121_0035791
630 Ga0496121_0160655
631 Ga0496122_0002722
632 Ga0496123_0001781
633 Ga0496124_0115862
634 Ga0496125_0033418
635 Ga0496125_0053039
636 Ga0496126_0086046
637 Ga0501032_0173060
638 Ga0501032_0245141
639 Ga0501032_0247240
640 Ga0501033_0150783
641 Ga0501036_0407195
642 Ga0501037_0046537
643 Ga0501037_0113938
644 Ga0501038_0065503
645 Ga0501038_0336053
646 Ga0501047_0018565
647 Ga0501047_0041271
648 Ga0501047_0098031
649 Ga0501047_0188673
650 Ga0501069_0040240
651 Ga0501069_0336219
652 Ga0501070_0003080
653 Ga0501070_0005109
654 Ga0501070_0005513
655 Ga0501070_0009830
656 Ga0501070_0037564
657 Ga0501070_0072157
658 Ga0501070_0196404
659 Ga0501071_0011041
660 Ga0501073_0005479
661 Ga0501073_0032289
662 Ga0501074_0000121
663 Ga0501074_0007458
664 Ga0501074_0007706
665 Ga0501074_0063453
666 Ga0501074_0373213
667 Ga0501077_0003192
668 Ga0501079_0105633
669 Ga0501079_0286779
670 Ga0501080_0130076
671 Ga0501035_0010404
672 Ga0501035_0010772
673 Ga0501035_0024226
674 Ga0501035_0120733
675 Ga0501044_0009283
676 Ga0501044_0041784
677 Ga0501044_0049238
678 Ga0501044_0273741
679 nmdc:mga08y16_297361_c1
680 Ga0500556_0000763
681 2929298696
682 2987608432

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04452

Methyltrans_RNA

RNA methyltransferase domain

111

276

0.98

PF20260

PUA_4

RNA methyltransferase PUA domain

57

104

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vm8-assembly3.cif.gz_B crystal structure of a ribosomal rna small subunit methyltransferase e from neisseria gonorrhoeae bound to s-adenosyl methionine 0.9448 2 234
5vm8-assembly3.cif.gz_B crystal structure of a ribosomal rna small subunit methyltransferase e from neisseria gonorrhoeae bound to s-adenosyl methionine 0.9218 2 234
5vm8-assembly3.cif.gz_A crystal structure of a ribosomal rna small subunit methyltransferase e from neisseria gonorrhoeae bound to s-adenosyl methionine 0.9205 2 234
4e8b-assembly1.cif.gz_A crystal structure of 16s rrna methyltransferase rsme from e.coli 0.9171 4 233
1nxz-assembly1.cif.gz_B x-ray crystal structure of protein yggj_haein of haemophilus influenzae. northeast structural genomics consortium target ir73. 0.9143 2 233
ID Description Score Start End Superfamily
5o95A01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.954 1 71 2.40.240.20
5vm8B02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9309 75 234 3.40.1280.10
1vhyA01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.922 4 70 2.40.240.20
5o95A01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.9169 1 71 2.40.240.20
2cx8A02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9018 74 236 3.40.1280.10
ID Description Score Start End GO Terms
AF-A0A7X5SDB1-F1-model_v4 16S rRNA (Uracil(1498)-N(3))-methyltransferase 0.974 1 68 GO:0008168
GO:0032259
AF-A0A1W9L2H1-F1-model_v4 Ribosomal RNA small subunit methyltransferase E PUA-like domain-containing protein 0.9736 1 71
AF-A0A7X5SDB1-F1-model_v4 16S rRNA (Uracil(1498)-N(3))-methyltransferase 0.9602 1 68 GO:0008168
GO:0032259
AF-A0A3C1TRN1-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) (16S rRNA m3U1498 methyltransferase) 0.9554 1 120 GO:0005737
GO:0070042
GO:0070475
AF-A0A7V6CC06-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) (16S rRNA m3U1498 methyltransferase) 0.9533 1 138 GO:0005737
GO:0070042
GO:0070475

Map