F414450

General Info

Members Datasets Scaffolds Average Seq Length
340 208 327 352

Family's Representative Sequence

Representative Sequence 3300044735|Ga0466968_0037102|Ga0466968_0037102_310_1401
Length 363
Sequence MAEELLELEDELENGDGSEELYEKINMLVDKGQEPVRIDKFLTARIEGATRNKIQQALDGEMVLVNDKPVKSNYKIRPLDRIIVYSNKNPESTEVVPEEIPLNIVYEDDDVMVIDKPAGMVVHPGCGNYSGTLVNGLSWYLGDKTQATSPELPRFGLVHRIDKNTSGLLVVAKSDKAMNDLAKQFFDHTVHRRYIALVWGDFQEDEGTIVAHVGRHQRFRKIMDAYPDGEHGKEAITHYRVLERFNYVTLVECRLETGRTHQIRVHMQHIGHSLFNDDTYGGDRIVKGTIFAKYKQFVENCFEIMPRHALHAQQLGFIHPRTRQQMYFESPMPSDFTTVLEKWKRYTTARPLEEKANPNEKWD

Samples

Sample ID Description Type Environment
1 2818991442 Chitinophaga pinensis 1204 Isolate Unclassified
2 2818991444 Filimonas endophytica 3197 Isolate Unclassified
3 2818991460 Chitinophaga polysaccharea 1209 Isolate Unclassified
4 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
5 2884791551 Chitinophaga oryzae 1310 Isolate Unclassified
6 2896085136 Chitinophaga alhagiae T22 Isolate Unclassified
7 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
8 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
9 2914759650 Rhizosphaericola mali Isolate Rhizosphere
10 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
11 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
12 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
13 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
14 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
15 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
16 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
17 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
18 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
19 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
20 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
21 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
25 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
26 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
27 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
28 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
29 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
30 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
43 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
50 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
51 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
52 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
53 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
63 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
72 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
73 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
74 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
75 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
76 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
77 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
78 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
81 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
82 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
83 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
84 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
85 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
86 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
88 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
89 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
127 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
130 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
133 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
134 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
135 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
136 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
137 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
138 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
139 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
140 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
141 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
142 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
143 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
144 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
145 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
146 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
147 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
148 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
149 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
150 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
151 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
152 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
156 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
157 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
176 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
177 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
178 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
179 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
180 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
181 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
182 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
183 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
184 3300049674 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_A_3_drought Metagenome Rhizosphere
185 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
186 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
187 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
188 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
189 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
190 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
191 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
192 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
193 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
197 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
198 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
199 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
200 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
201 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
202 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
203 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
204 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
205 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
206 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
207 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
208 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.18
Metatranscriptomes 0
Isolates 3.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.88
Nodule 0
Rhizoplane 0
Rhizosphere 88.53
Stem 0
Stem Tuber 0
Unclassified 5.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootL2_10009667 3300003322 Bacteria 12380
2 rootL2_10019698 3300003322 Bacteria 2957
3 rootL2_10046061 3300003322 Bacteria 4541
4 rootL2_10103824 3300003322 Bacteria 5695
5 rootH1_10040112 3300003323 Bacteria 17684
6 rootH1_10194212 3300003323 Bacteria 1338
7 JGI25160J50197_1000873 3300003354 Bacteria 15941
8 Ga0055535_1005974 3300003761 Bacteria 2552
9 Ga0070658_10303347 3300005327 Bacteria 1362
10 Ga0070676_10014038 3300005328 Bacteria 4395
11 Ga0070683_100363905 3300005329 Bacteria 1377
12 Ga0070683_100366959 3300005329 Bacteria 1371
13 Ga0070677_10020219 3300005333 Unclassified 2423
14 Ga0068869_100053297 3300005334 Unclassified 2940
15 Ga0068869_100102581 3300005334 Bacteria 2166
16 Ga0070680_100046909 3300005336 Bacteria 3516
17 Ga0070680_100075280 3300005336 Bacteria 2779
18 Ga0070680_100129707 3300005336 Bacteria 2109
19 Ga0070682_100006133 3300005337 Bacteria 6733
20 Ga0068868_100050788 3300005338 Bacteria 3258
21 Ga0070660_100044030 3300005339 Bacteria 3411
22 Ga0070660_100088860 3300005339 Bacteria 2434
23 Ga0070689_100001483 3300005340 Bacteria 14964
24 Ga0070661_100093361 3300005344 Bacteria 2230
25 Ga0070692_10124774 3300005345 Bacteria 1440
26 Ga0070669_100000458 3300005353 Bacteria 30951
27 Ga0070675_100103050 3300005354 Bacteria 2405
28 Ga0070674_100024372 3300005356 Bacteria 3926
29 Ga0070673_100006930 3300005364 Bacteria 7414
30 Ga0070673_100007355 3300005364 Bacteria 7254
31 Ga0070673_100013960 3300005364 Bacteria 5577
32 Ga0070673_100136132 3300005364 Bacteria 2068
33 Ga0070688_100000687 3300005365 Bacteria 16799
34 Ga0070659_100022845 3300005366 Bacteria 4778
35 Ga0070659_100053104 3300005366 Bacteria 3189
36 Ga0070667_100120221 3300005367 Unclassified 2284
37 Ga0070700_100050674 3300005441 Bacteria 2581
38 Ga0070662_100089871 3300005457 Bacteria 2304
39 Ga0070681_10083998 3300005458 Bacteria 3136
40 Ga0068867_100051404 3300005459 Bacteria 3039
41 Ga0068867_100118193 3300005459 Unclassified 2045
42 Ga0070679_100002696 3300005530 Bacteria 16171
43 Ga0070679_100172697 3300005530 Bacteria 2134
44 Ga0070679_100462100 3300005530 Bacteria 1214
45 Ga0068853_100014895 3300005539 Bacteria 6387
46 Ga0068853_100031728 3300005539 Bacteria 4469
47 Ga0068853_100035993 3300005539 Bacteria 4207
48 Ga0068853_100253683 3300005539 Bacteria 1615
49 Ga0070672_100002077 3300005543 Bacteria 12613
50 Ga0070672_100019519 3300005543 Bacteria 4921
51 Ga0068855_100005487 3300005563 Bacteria 15473
52 Ga0068855_100015674 3300005563 Bacteria 9120
53 Ga0068855_100305709 3300005563 Bacteria 1760
54 Ga0070664_100012446 3300005564 Bacteria 6916
55 Ga0068857_100029710 3300005577 Bacteria 4824
56 Ga0068857_100097363 3300005577 Bacteria 2637
57 Ga0068857_100255482 3300005577 Bacteria 1607
58 Ga0068856_100062710 3300005614 Bacteria 3671
59 Ga0068852_100031949 3300005616 Bacteria 4353
60 Ga0068859_100005555 3300005617 Bacteria 12845
61 Ga0068859_100010347 3300005617 Bacteria 9388
62 Ga0068859_100231097 3300005617 Unclassified 1938
63 Ga0068864_100003560 3300005618 Bacteria 12874
64 Ga0068864_100126131 3300005618 Unclassified 2294
65 Ga0068861_100014722 3300005719 Bacteria 5494
66 Ga0068851_10107872 3300005834 Bacteria 1484
67 Ga0068870_10033773 3300005840 Bacteria 2613
68 Ga0068863_100168892 3300005841 Bacteria 2098
69 Ga0068860_100002572 3300005843 Bacteria 18984
70 Ga0068860_100207224 3300005843 Bacteria 1902
71 Ga0068860_100299813 3300005843 Bacteria 1574
72 Ga0068862_100003547 3300005844 Bacteria 13375
73 Ga0068862_100018106 3300005844 Bacteria 5866
74 Ga0081539_10003031 3300005985 Bacteria 21772
75 Ga0075366_10037892 3300006195 Bacteria 2847
76 Ga0097621_100292887 3300006237 Bacteria 1435
77 Ga0075370_10087508 3300006353 Bacteria 1795
78 Ga0068871_100075645 3300006358 Bacteria 2780
79 Ga0068871_100095491 3300006358 Bacteria 2482
80 Ga0068865_100089281 3300006881 Bacteria 2232
81 Ga0097620_100005555 3300006931 Bacteria 12845
82 Ga0097620_100010347 3300006931 Bacteria 9388
83 Ga0097620_100231102 3300006931 Unclassified 1938
84 Ga0105240_10070157 3300009093 Bacteria 4336
85 Ga0105240_10108781 3300009093 Bacteria 3358
86 Ga0111539_10006834 3300009094 Bacteria 14661
87 Ga0105241_10114762 3300009174 Bacteria 2161
88 Ga0105242_10072122 3300009176 Bacteria 2867
89 Ga0105237_10003443 3300009545 Bacteria 18789
90 Ga0105237_10005882 3300009545 Bacteria 13751
91 Ga0105239_10039464 3300010375 Bacteria 5173
92 Ga0105239_10040767 3300010375 Bacteria 5087
93 Ga0105239_10385535 3300010375 Bacteria 1585
94 Ga0157373_10002799 3300013100 Bacteria 13193
95 Ga0157373_10018157 3300013100 Bacteria 5123
96 Ga0157373_10024967 3300013100 Bacteria 4327
97 Ga0157373_10035635 3300013100 Bacteria 3572
98 Ga0157371_10001955 3300013102 Bacteria 20487
99 Ga0157371_10002330 3300013102 Bacteria 18216
100 Ga0157371_10003617 3300013102 Bacteria 13918
101 Ga0157371_10007345 3300013102 Bacteria 8935
102 Ga0157371_10059773 3300013102 Bacteria 2702
103 Ga0157371_10067424 3300013102 Bacteria 2533
104 Ga0157371_10096463 3300013102 Bacteria 2095
105 Ga0157371_10112607 3300013102 Bacteria 1931
106 Ga0157370_10005999 3300013104 Bacteria 13518
107 Ga0157370_10009965 3300013104 Bacteria 10055
108 Ga0157370_10078586 3300013104 Bacteria 3107
109 Ga0157370_10178691 3300013104 Bacteria 1972
110 Ga0157369_10009920 3300013105 Bacteria 10883
111 Ga0157369_10029738 3300013105 Bacteria 6035
112 Ga0157369_10048415 3300013105 Bacteria 4613
113 Ga0157374_10023176 3300013296 Bacteria 5548
114 Ga0157374_10245305 3300013296 Bacteria 1762
115 Ga0157378_10028941 3300013297 Bacteria 4890
116 Ga0157378_10198581 3300013297 Bacteria 1896
117 Ga0157378_10311395 3300013297 Bacteria 1527
118 Ga0163162_10000525 3300013306 Bacteria 35526
119 Ga0163162_10154109 3300013306 Bacteria 2417
120 Ga0157372_10003307 3300013307 Bacteria 17410
121 Ga0157372_10023311 3300013307 Bacteria 6709
122 Ga0157372_10025301 3300013307 Bacteria 6452
123 Ga0157372_10079229 3300013307 Bacteria 3715
124 Ga0157372_10172530 3300013307 Bacteria 2502
125 Ga0157372_10354549 3300013307 Bacteria 1709
126 Ga0157375_10062767 3300013308 Bacteria 3693
127 Ga0157375_10445473 3300013308 Bacteria 1460
128 Ga0157380_10000252 3300014326 Bacteria 32093
129 Ga0157380_10031589 3300014326 Bacteria 4066
130 Ga0157380_10226124 3300014326 Bacteria 1677
131 Ga0157377_10000289 3300014745 Bacteria 23989
132 Ga0157377_10064180 3300014745 Bacteria 2106
133 Ga0157379_10003660 3300014968 Bacteria 13055
134 Ga0157379_10228870 3300014968 Bacteria 1685
135 Ga0157376_10002911 3300014969 Bacteria 11743
136 Ga0157376_10024073 3300014969 Bacteria 4775
137 Ga0157376_10506876 3300014969 Bacteria 1187
138 Ga0182005_1000304 3300015265 Bacteria 29797
139 Ga0213876_10008076 3300021384 Bacteria 5706
140 Ga0209436_103746 3300025208 Bacteria 3936
141 Ga0209258_100293 3300025242 Bacteria 82199
142 Ga0209148_1000278 3300025254 Bacteria 79641
143 Ga0207426_1000019 3300025302 Bacteria 558579
144 Ga0207426_1000051 3300025302 Bacteria 391700
145 Ga0207697_10037265 3300025315 Bacteria 1992
146 Ga0207697_10049779 3300025315 Unclassified 1730
147 Ga0207680_10020374 3300025903 Bacteria 3568
148 Ga0207647_10033403 3300025904 Bacteria 3294
149 Ga0207645_10033163 3300025907 Bacteria 3319
150 Ga0207643_10023344 3300025908 Bacteria 3409
151 Ga0207705_10093015 3300025909 Bacteria 2210
152 Ga0207705_10159453 3300025909 Bacteria 1694
153 Ga0207654_10043782 3300025911 Bacteria 2539
154 Ga0207707_10071818 3300025912 Bacteria 3017
155 Ga0207695_10006821 3300025913 Bacteria 14709
156 Ga0207671_10006199 3300025914 Bacteria 10738
157 Ga0207671_10073796 3300025914 Unclassified 2549
158 Ga0207660_10147716 3300025917 Bacteria 1803
159 Ga0207657_10005727 3300025919 Bacteria 12961
160 Ga0207657_10097469 3300025919 Bacteria 2445
161 Ga0207657_10110521 3300025919 Bacteria 2270
162 Ga0207649_10192256 3300025920 Bacteria 1436
163 Ga0207652_10000010 3300025921 Bacteria 247079
164 Ga0207652_10000844 3300025921 Bacteria 29188
165 Ga0207681_10002677 3300025923 Bacteria 11289
166 Ga0207650_10209977 3300025925 Bacteria 1563
167 Ga0207659_10026053 3300025926 Bacteria 3941
168 Ga0207659_10160485 3300025926 Bacteria 1764
169 Ga0207690_10006254 3300025932 Bacteria 7051
170 Ga0207670_10009484 3300025936 Bacteria 5556
171 Ga0207665_10120637 3300025939 Bacteria 1852
172 Ga0207691_10003925 3300025940 Bacteria 14448
173 Ga0207691_10004443 3300025940 Bacteria 13595
174 Ga0207691_10278585 3300025940 Bacteria 1439
175 Ga0207689_10120691 3300025942 Unclassified 2156
176 Ga0207661_10356617 3300025944 Bacteria 1320
177 Ga0207667_10001278 3300025949 Bacteria 31572
178 Ga0207667_10016684 3300025949 Bacteria 8288
179 Ga0207667_10084059 3300025949 Bacteria 3295
180 Ga0207667_10216258 3300025949 Bacteria 1964
181 Ga0207651_10018415 3300025960 Bacteria 4156
182 Ga0207651_10187909 3300025960 Bacteria 1645
183 Ga0207712_10011532 3300025961 Bacteria 5633
184 Ga0207668_10000790 3300025972 Bacteria 19372
185 Ga0207668_10090972 3300025972 Bacteria 2241
186 Ga0207668_10093946 3300025972 Bacteria 2211
187 Ga0207658_10004900 3300025986 Bacteria 9237
188 Ga0207658_10176926 3300025986 Unclassified 1763
189 Ga0207703_10012793 3300026035 Bacteria 6542
190 Ga0207639_10050090 3300026041 Bacteria 3170
191 Ga0207639_10088367 3300026041 Bacteria 2473
192 Ga0207708_10125223 3300026075 Bacteria 2005
193 Ga0207641_10252221 3300026088 Bacteria 1648
194 Ga0207648_10107229 3300026089 Bacteria 2452
195 Ga0207676_10014855 3300026095 Bacteria 5610
196 Ga0207674_10011898 3300026116 Bacteria 9755
197 Ga0207674_10092336 3300026116 Bacteria 3017
198 Ga0207674_10131519 3300026116 Bacteria 2465
199 Ga0207674_10249047 3300026116 Bacteria 1723
200 Ga0207675_100000386 3300026118 Bacteria 42305
201 Ga0207675_100046589 3300026118 Bacteria 4051
202 Ga0207698_10101288 3300026142 Bacteria 2388
203 Ga0207698_10606043 3300026142 Bacteria 1080
204 Ga0207428_10119210 3300027907 Bacteria 2025
205 Ga0268265_10007727 3300028380 Bacteria 7257
206 Ga0268265_10203793 3300028380 Unclassified 1718
207 Ga0268264_10011790 3300028381 Bacteria 7205
208 Ga0268264_10026350 3300028381 Bacteria 4749
209 Ga0307515_10000002 3300028794 Bacteria 1231751
210 Ga0265327_10000117 3300031251 Bacteria 173075
211 Ga0265327_10000531 3300031251 Bacteria 65562
212 Ga0307407_10135693 3300031903 Bacteria 1581
213 Ga0373935_0242789 3300035692 Bacteria 1258
214 Ga0373937_0087775 3300036401 Bacteria 2879
215 Ga0373937_0437385 3300036401 Bacteria 1242
216 Ga0373925_0212885 3300037068 Bacteria 1540
217 Ga0395899_0001121 3300037312 Bacteria 23926
218 Ga0395899_0049843 3300037312 Bacteria 3111
219 Ga0395900_0002932 3300037418 Bacteria 18581
220 Ga0395900_0152532 3300037418 Bacteria 2360
221 Ga0395900_0187282 3300037418 Bacteria 2100
222 Ga0395900_0409552 3300037418 Bacteria 1318
223 Ga0395898_0000488 3300037466 Bacteria 78598
224 Ga0395898_0095436 3300037466 Bacteria 2857
225 Ga0395898_0132617 3300037466 Bacteria 2385
226 Ga0395905_0013318 3300037471 Bacteria 7885
227 Ga0395905_0163196 3300037471 Bacteria 2094
228 Ga0395901_0017432 3300038443 Bacteria 7331
229 Ga0395901_0048123 3300038443 Bacteria 4428
230 Ga0395901_0070286 3300038443 Bacteria 3647
231 Ga0395901_0337215 3300038443 Bacteria 1558
232 Ga0395901_0378300 3300038443 Unclassified 1458
233 Ga0436365_1380226 3300039437 Bacteria 3810
234 Ga0439435_0078944 3300042436 Bacteria 985
235 Ga0466972_0000003 3300044658 Bacteria 391452
236 Ga0466972_0059546 3300044658 Bacteria 1833
237 Ga0453684_0118168 3300044712 Bacteria 3207
238 Ga0466968_0037102 3300044735 Bacteria 2044
239 Ga0466970_0005282 3300044765 Bacteria 6398
240 Ga0466957_0253452 3300044842 Bacteria 1171
241 Ga0466959_0035012 3300045049 Bacteria 3714
242 Ga0466967_0341645 3300045976 Bacteria 1448
243 Ga0495630_0071064 3300046517 Bacteria 2619
244 Ga0495668_0001941 3300046616 Bacteria 18402
245 Ga0495634_0031809 3300046642 Bacteria 3632
246 Ga0495623_0116681 3300046679 Bacteria 1613
247 Ga0495674_0040485 3300047319 Bacteria 4168
248 Ga0495672_0029210 3300047320 Bacteria 3475
249 Ga0495672_0127339 3300047320 Bacteria 1344
250 Ga0495686_0035983 3300047472 Bacteria 3179
251 Ga0496124_0020874 3300048927 Bacteria 6043
252 Ga0501298_000394 3300049521 Bacteria 5943
253 Ga0501031_0024294 3300049568 Bacteria 3950
254 Ga0501032_0005376 3300049569 Bacteria 9530
255 Ga0501032_0083186 3300049569 Bacteria 2129
256 Ga0501032_0086674 3300049569 Bacteria 2081
257 Ga0501033_0065663 3300049570 Bacteria 2670
258 Ga0501034_0000225 3300049571 Bacteria 107163
259 Ga0501034_0004706 3300049571 Bacteria 15108
260 Ga0501034_0008175 3300049571 Bacteria 11093
261 Ga0501034_0255722 3300049571 Bacteria 1695
262 Ga0501036_0002360 3300049572 Bacteria 14767
263 Ga0501036_0018399 3300049572 Bacteria 5853
264 Ga0501037_0003684 3300049573 Bacteria 11123
265 Ga0501037_0024114 3300049573 Bacteria 4498
266 Ga0501038_0006153 3300049574 Bacteria 11107
267 Ga0501038_0263668 3300049574 Bacteria 1361
268 Ga0501039_0021736 3300049575 Bacteria 4923
269 Ga0501039_0025106 3300049575 Bacteria 4578
270 Ga0501043_0014705 3300049579 Bacteria 6126
271 Ga0501043_0054946 3300049579 Bacteria 3128
272 Ga0501046_0006183 3300049580 Bacteria 10632
273 Ga0501046_0054596 3300049580 Bacteria 3142
274 Ga0501046_0104709 3300049580 Unclassified 2168
275 Ga0501047_0006288 3300049581 Bacteria 11168
276 Ga0501047_0007787 3300049581 Bacteria 10089
277 Ga0501048_0113300 3300049582 Bacteria 1916
278 Ga0501067_0059420 3300049583 Bacteria 2116
279 Ga0501068_0252032 3300049584 Unclassified 1125
280 Ga0501070_0019278 3300049586 Bacteria 5721
281 Ga0501070_0083130 3300049586 Bacteria 2650
282 Ga0501073_0069514 3300049589 Bacteria 2453
283 Ga0501074_0000275 3300049590 Bacteria 29532
284 Ga0501198_002088 3300049649 Bacteria 2664
285 Ga0501202_002252 3300049652 Bacteria 3225
286 Ga0501206_006767 3300049653 Bacteria 1493
287 Ga0501207_000901 3300049654 Bacteria 3574
288 Ga0501207_007896 3300049654 Bacteria 1527
289 Ga0501217_000584 3300049661 Bacteria 6142
290 Ga0501222_004889 3300049662 Bacteria 1820
291 Ga0501223_024860 3300049663 Bacteria 1165
292 Ga0501224_002363 3300049664 Bacteria 2560
293 Ga0501235_008771 3300049669 Unclassified 2205
294 Ga0501242_006267 3300049674 Bacteria 1355
295 Ga0501243_000717 3300049675 Bacteria 4588
296 Ga0501252_000958 3300049682 Unclassified 2498
297 Ga0501259_002123 3300049688 Bacteria 3263
298 Ga0501261_000428 3300049690 Bacteria 5494
299 Ga0501234_000133 3300049707 Bacteria 9804
300 Ga0501079_0083642 3300049741 Unclassified 2469
301 Ga0501080_0021404 3300049742 Bacteria 5985
302 Ga0501080_0101764 3300049742 Bacteria 2665
303 Ga0501080_0151397 3300049742 Bacteria 2144
304 Ga0501083_0002224 3300049744 Bacteria 13260
305 Ga0501266_001388 3300049763 Bacteria 3090
306 Ga0501035_0020207 3300049822 Bacteria 6116
307 Ga0501035_0105327 3300049822 Bacteria 2473
308 Ga0501035_0364212 3300049822 Bacteria 1208
309 Ga0501044_0011915 3300049823 Bacteria 9422
310 Ga0501044_0014310 3300049823 Bacteria 8564
311 Ga0501044_0028371 3300049823 Bacteria 5908
312 Ga0501044_0079608 3300049823 Bacteria 3320
313 Ga0501044_0167205 3300049823 Unclassified 2173
314 nmdc:mga0k408_21646_c1 3300050493 Bacteria 3613
315 nmdc:mga08y16_12116_c1 3300050511 Bacteria 9062
316 nmdc:mga08y16_153967_c1 3300050511 Bacteria 2389
317 Ga0500644_0000119 3300053088 Bacteria 49309
318 Ga0500646_0007808 3300053090 Bacteria 2734
319 Ga0500562_000062 3300053108 Bacteria 53042
320 Ga0500569_000060 3300053109 Bacteria 19362
321 Ga0500559_0002093 3300053136 Bacteria 10648
322 Ga0500577_0001453 3300053142 Bacteria 6047
323 Ga0500589_026122 3300053147 Bacteria 2709
324 Ga0500622_0000337 3300053156 Bacteria 46048
325 Ga0500633_0010041 3300053160 Bacteria 2515
326 Ga0500636_0050476 3300053177 Bacteria 2447
327 Ga0501084_0058489 3300054114 Bacteria 3225

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300042436 Ga0439435_0078944 Ga0439435_0078944_59_940 293
2 3300037068 Ga0373925_0212885 Ga0373925_0212885_126_1097 309
3 3300049570 Ga0501033_0065663 Ga0501033_0065663_1696_2640 312
4 3300038443 Ga0395901_0048123 Ga0395901_0048123_3467_4408 313
5 3300038443 Ga0395901_0378300 Ga0395901_0378300_500_1441 313
6 3300049579 Ga0501043_0054946 Ga0501043_0054946_97_1062 320
7 3300050511 nmdc:mga08y16_153967_c1 nmdc:mga08y16_153967_c1_100_1065 320
8 3300049662 Ga0501222_004889 Ga0501222_004889_827_1810 327
9 3300049663 Ga0501223_024860 Ga0501223_024860_160_1143 327
10 3300035692 Ga0373935_0242789 Ga0373935_0242789_244_1230 328
11 3300049823 Ga0501044_0167205 Ga0501044_0167205_651_1652 331
12 3300009093 Ga0105240_10108781 Ga0105240_101087813 332
13 3300005614 Ga0068856_100062710 Ga0068856_1000627103 333
14 3300009093 Ga0105240_10070157 Ga0105240_100701574 333
15 3300009174 Ga0105241_10114762 Ga0105241_101147624 333
16 3300009545 Ga0105237_10005882 Ga0105237_100058826 333
17 3300010375 Ga0105239_10039464 Ga0105239_100394645 333
18 3300013100 Ga0157373_10002799 Ga0157373_1000279913 333
19 3300013102 Ga0157371_10096463 Ga0157371_100964631 333
20 3300013105 Ga0157369_10009920 Ga0157369_100099201 333
21 3300013307 Ga0157372_10172530 Ga0157372_101725303 333
22 3300025911 Ga0207654_10043782 Ga0207654_100437823 333
23 3300025913 Ga0207695_10006821 Ga0207695_100068219 333
24 3300025914 Ga0207671_10073796 Ga0207671_100737961 333
25 3300025949 Ga0207667_10084059 Ga0207667_100840591 333
26 3300046679 Ga0495623_0116681 Ga0495623_0116681_26_1027 333
27 3300025912 Ga0207707_10071818 Ga0207707_100718182 334
28 3300046642 Ga0495634_0031809 Ga0495634_0031809_1431_2474 338
29 3300005618 Ga0068864_100003560 Ga0068864_1000035602 342
30 3300005334 Ga0068869_100053297 Ga0068869_1000532972 343
31 3300005336 Ga0070680_100046909 Ga0070680_1000469095 343
32 3300005345 Ga0070692_10124774 Ga0070692_101247741 343
33 3300005367 Ga0070667_100120221 Ga0070667_1001202211 343
34 3300005563 Ga0068855_100005487 Ga0068855_1000054874 343
35 3300005617 Ga0068859_100231097 Ga0068859_1002310971 343
36 3300005618 Ga0068864_100126131 Ga0068864_1001261313 343
37 3300005843 Ga0068860_100002572 Ga0068860_10000257211 343
38 3300005844 Ga0068862_100018106 Ga0068862_1000181067 343
39 3300006931 Ga0097620_100231102 Ga0097620_1002311021 343
40 3300013100 Ga0157373_10024967 Ga0157373_100249675 343
41 3300013100 Ga0157373_10035635 Ga0157373_100356353 343
42 3300013102 Ga0157371_10001955 Ga0157371_1000195517 343
43 3300013102 Ga0157371_10002330 Ga0157371_100023302 343
44 3300013102 Ga0157371_10059773 Ga0157371_100597733 343
45 3300013102 Ga0157371_10067424 Ga0157371_100674242 343
46 3300013102 Ga0157371_10112607 Ga0157371_101126072 343
47 3300013104 Ga0157370_10009965 Ga0157370_100099659 343
48 3300013104 Ga0157370_10078586 Ga0157370_100785863 343
49 3300013105 Ga0157369_10029738 Ga0157369_100297382 343
50 3300013307 Ga0157372_10023311 Ga0157372_100233113 343
51 3300025909 Ga0207705_10159453 Ga0207705_101594533 343
52 3300025917 Ga0207660_10147716 Ga0207660_101477162 343
53 3300025919 Ga0207657_10110521 Ga0207657_101105213 343
54 3300025921 Ga0207652_10000844 Ga0207652_1000084431 343
55 3300025942 Ga0207689_10120691 Ga0207689_101206912 343
56 3300025949 Ga0207667_10001278 Ga0207667_100012786 343
57 3300025986 Ga0207658_10176926 Ga0207658_101769263 343
58 3300028380 Ga0268265_10203793 Ga0268265_102037932 343
59 3300028381 Ga0268264_10026350 Ga0268264_100263505 343
60 3300037312 Ga0395899_0001121 Ga0395899_0001121_14880_15917 343
61 3300037312 Ga0395899_0049843 Ga0395899_0049843_281_1318 343
62 3300037418 Ga0395900_0002932 Ga0395900_0002932_15398_16435 343
63 3300037418 Ga0395900_0152532 Ga0395900_0152532_642_1673 343
64 3300037418 Ga0395900_0409552 Ga0395900_0409552_246_1277 343
65 3300037466 Ga0395898_0000488 Ga0395898_0000488_13608_14645 343
66 3300037466 Ga0395898_0095436 Ga0395898_0095436_1100_2131 343
67 3300038443 Ga0395901_0017432 Ga0395901_0017432_5538_6575 343
68 3300038443 Ga0395901_0337215 Ga0395901_0337215_52_1083 343
69 iso_pu_bacteria 2914759650 2914762793 344
70 3300005327 Ga0070658_10303347 Ga0070658_103033472 345
71 3300005329 Ga0070683_100363905 Ga0070683_1003639052 345
72 3300005333 Ga0070677_10020219 Ga0070677_100202192 345
73 3300005337 Ga0070682_100006133 Ga0070682_1000061333 345
74 3300005338 Ga0068868_100050788 Ga0068868_1000507881 345
75 3300005364 Ga0070673_100013960 Ga0070673_1000139604 345
76 3300005366 Ga0070659_100053104 Ga0070659_1000531043 345
77 3300005458 Ga0070681_10083998 Ga0070681_100839982 345
78 3300005543 Ga0070672_100019519 Ga0070672_1000195194 345
79 3300005563 Ga0068855_100305709 Ga0068855_1003057092 345
80 3300005564 Ga0070664_100012446 Ga0070664_1000124465 345
81 3300005577 Ga0068857_100097363 Ga0068857_1000973633 345
82 3300006237 Ga0097621_100292887 Ga0097621_1002928872 345
83 3300006358 Ga0068871_100075645 Ga0068871_1000756454 345
84 3300013104 Ga0157370_10178691 Ga0157370_101786912 345
85 3300013297 Ga0157378_10028941 Ga0157378_100289414 345
86 3300014326 Ga0157380_10031589 Ga0157380_100315894 345
87 3300014745 Ga0157377_10064180 Ga0157377_100641802 345
88 3300014969 Ga0157376_10506876 Ga0157376_105068762 345
89 3300025315 Ga0207697_10049779 Ga0207697_100497792 345
90 3300025919 Ga0207657_10005727 Ga0207657_100057277 345
91 3300025926 Ga0207659_10160485 Ga0207659_101604852 345
92 3300025940 Ga0207691_10003925 Ga0207691_1000392514 345
93 3300025944 Ga0207661_10356617 Ga0207661_103566172 345
94 3300025960 Ga0207651_10018415 Ga0207651_100184153 345
95 3300026116 Ga0207674_10092336 Ga0207674_100923363 345
96 3300026142 Ga0207698_10101288 Ga0207698_101012882 345
97 3300049584 Ga0501068_0252032 Ga0501068_0252032_33_1076 345
98 3300047320 Ga0495672_0127339 Ga0495672_0127339_48_1097 346
99 iso_pu_bacteria 2818991444 2819590775 346
100 iso_pu_bacteria 2929154850 2929157807 346
101 3300013307 Ga0157372_10079229 Ga0157372_100792293 347
102 3300013308 Ga0157375_10445473 Ga0157375_104454731 347
103 iso_pu_bacteria 2896109856 2896112446 347
104 3300005336 Ga0070680_100075280 Ga0070680_1000752802 348
105 3300005336 Ga0070680_100129707 Ga0070680_1001297072 348
106 3300005344 Ga0070661_100093361 Ga0070661_1000933613 348
107 3300005364 Ga0070673_100136132 Ga0070673_1001361323 348
108 3300005457 Ga0070662_100089871 Ga0070662_1000898712 348
109 3300005459 Ga0068867_100051404 Ga0068867_1000514042 348
110 3300005530 Ga0070679_100172697 Ga0070679_1001726972 348
111 3300005985 Ga0081539_10003031 Ga0081539_1000303121 348
112 3300013296 Ga0157374_10023176 Ga0157374_100231764 348
113 3300013297 Ga0157378_10311395 Ga0157378_103113951 348
114 3300013307 Ga0157372_10354549 Ga0157372_103545492 348
115 3300025903 Ga0207680_10020374 Ga0207680_100203742 348
116 3300025920 Ga0207649_10192256 Ga0207649_101922561 348
117 3300025960 Ga0207651_10187909 Ga0207651_101879091 348
118 3300026041 Ga0207639_10088367 Ga0207639_100883673 348
119 3300037471 Ga0395905_0163196 Ga0395905_0163196_560_1606 348
120 3300045976 Ga0466967_0341645 Ga0466967_0341645_163_1209 348
121 3300005328 Ga0070676_10014038 Ga0070676_100140385 349
122 3300005334 Ga0068869_100102581 Ga0068869_1001025812 349
123 3300005339 Ga0070660_100044030 Ga0070660_1000440301 349
124 3300005340 Ga0070689_100001483 Ga0070689_1000014837 349
125 3300005353 Ga0070669_100000458 Ga0070669_10000045819 349
126 3300005354 Ga0070675_100103050 Ga0070675_1001030502 349
127 3300005364 Ga0070673_100006930 Ga0070673_1000069309 349
128 3300005364 Ga0070673_100007355 Ga0070673_1000073556 349
129 3300005365 Ga0070688_100000687 Ga0070688_1000006879 349
130 3300005441 Ga0070700_100050674 Ga0070700_1000506742 349
131 3300005530 Ga0070679_100002696 Ga0070679_1000026967 349
132 3300005539 Ga0068853_100014895 Ga0068853_1000148956 349
133 3300005543 Ga0070672_100002077 Ga0070672_1000020776 349
134 3300005577 Ga0068857_100029710 Ga0068857_1000297105 349
135 3300005617 Ga0068859_100005555 Ga0068859_1000055557 349
136 3300005617 Ga0068859_100010347 Ga0068859_1000103479 349
137 3300005719 Ga0068861_100014722 Ga0068861_1000147222 349
138 3300005840 Ga0068870_10033773 Ga0068870_100337732 349
139 3300005841 Ga0068863_100168892 Ga0068863_1001688922 349
140 3300005843 Ga0068860_100207224 Ga0068860_1002072242 349
141 3300005843 Ga0068860_100299813 Ga0068860_1002998132 349
142 3300005844 Ga0068862_100003547 Ga0068862_1000035472 349
143 3300006358 Ga0068871_100095491 Ga0068871_1000954912 349
144 3300006881 Ga0068865_100089281 Ga0068865_1000892812 349
145 3300006931 Ga0097620_100005555 Ga0097620_1000055557 349
146 3300006931 Ga0097620_100010347 Ga0097620_1000103479 349
147 3300009094 Ga0111539_10006834 Ga0111539_1000683412 349
148 3300009176 Ga0105242_10072122 Ga0105242_100721223 349
149 3300013296 Ga0157374_10245305 Ga0157374_102453052 349
150 3300013297 Ga0157378_10198581 Ga0157378_101985812 349
151 3300013306 Ga0163162_10154109 Ga0163162_101541092 349
152 3300013308 Ga0157375_10062767 Ga0157375_100627673 349
153 3300014326 Ga0157380_10000252 Ga0157380_1000025228 349
154 3300014745 Ga0157377_10000289 Ga0157377_1000028922 349
155 3300014968 Ga0157379_10003660 Ga0157379_100036606 349
156 3300014969 Ga0157376_10002911 Ga0157376_100029118 349
157 3300021384 Ga0213876_10008076 Ga0213876_100080764 349
158 3300025315 Ga0207697_10037265 Ga0207697_100372652 349
159 3300025907 Ga0207645_10033163 Ga0207645_100331632 349
160 3300025908 Ga0207643_10023344 Ga0207643_100233443 349
161 3300025909 Ga0207705_10093015 Ga0207705_100930152 349
162 3300025921 Ga0207652_10000010 Ga0207652_1000001082 349
163 3300025923 Ga0207681_10002677 Ga0207681_100026776 349
164 3300025925 Ga0207650_10209977 Ga0207650_102099771 349
165 3300025926 Ga0207659_10026053 Ga0207659_100260533 349
166 3300025932 Ga0207690_10006254 Ga0207690_100062549 349
167 3300025936 Ga0207670_10009484 Ga0207670_100094845 349
168 3300025940 Ga0207691_10004443 Ga0207691_100044436 349
169 3300025949 Ga0207667_10216258 Ga0207667_102162582 349
170 3300025972 Ga0207668_10000790 Ga0207668_1000079015 349
171 3300025972 Ga0207668_10090972 Ga0207668_100909722 349
172 3300025986 Ga0207658_10004900 Ga0207658_100049006 349
173 3300026035 Ga0207703_10012793 Ga0207703_100127936 349
174 3300026075 Ga0207708_10125223 Ga0207708_101252232 349
175 3300026088 Ga0207641_10252221 Ga0207641_102522211 349
176 3300026089 Ga0207648_10107229 Ga0207648_101072292 349
177 3300026095 Ga0207676_10014855 Ga0207676_100148552 349
178 3300026116 Ga0207674_10011898 Ga0207674_100118987 349
179 3300026116 Ga0207674_10131519 Ga0207674_101315193 349
180 3300026118 Ga0207675_100000386 Ga0207675_1000003868 349
181 3300026118 Ga0207675_100046589 Ga0207675_1000465895 349
182 3300026142 Ga0207698_10606043 Ga0207698_106060431 349
183 3300027907 Ga0207428_10119210 Ga0207428_101192102 349
184 3300028380 Ga0268265_10007727 Ga0268265_100077278 349
185 3300028381 Ga0268264_10011790 Ga0268264_100117906 349
186 3300028794 Ga0307515_10000002 Ga0307515_10000002488 349
187 3300031903 Ga0307407_10135693 Ga0307407_101356932 349
188 3300039437 Ga0436365_1380226 Ga0436365_1380226_1920_2969 349
189 3300049521 Ga0501298_000394 Ga0501298_000394_1643_2695 349
190 3300049649 Ga0501198_002088 Ga0501198_002088_934_1986 349
191 3300049652 Ga0501202_002252 Ga0501202_002252_1643_2695 349
192 3300049653 Ga0501206_006767 Ga0501206_006767_56_1108 349
193 3300049654 Ga0501207_000901 Ga0501207_000901_1845_2897 349
194 3300049654 Ga0501207_007896 Ga0501207_007896_170_1222 349
195 3300049661 Ga0501217_000584 Ga0501217_000584_827_1879 349
196 3300049664 Ga0501224_002363 Ga0501224_002363_1418_2470 349
197 3300049669 Ga0501235_008771 Ga0501235_008771_291_1343 349
198 3300049674 Ga0501242_006267 Ga0501242_006267_91_1143 349
199 3300049675 Ga0501243_000717 Ga0501243_000717_2654_3706 349
200 3300049682 Ga0501252_000958 Ga0501252_000958_593_1645 349
201 3300049690 Ga0501261_000428 Ga0501261_000428_4276_5328 349
202 3300049707 Ga0501234_000133 Ga0501234_000133_7855_8907 349
203 3300050511 nmdc:mga08y16_12116_c1 nmdc:mga08y16_12116_c1_3914_4981 349
204 iso_pu_bacteria 2896085136 2896087830 349
205 3300003322 rootL2_10046061 rootL2_100460614 350
206 3300003323 rootH1_10194212 rootH1_101942121 350
207 3300003354 JGI25160J50197_1000873 JGI25160J50197_10008739 350
208 3300005366 Ga0070659_100022845 Ga0070659_1000228453 350
209 3300005539 Ga0068853_100035993 Ga0068853_1000359933 350
210 3300005539 Ga0068853_100253683 Ga0068853_1002536831 350
211 3300005616 Ga0068852_100031949 Ga0068852_1000319493 350
212 3300009545 Ga0105237_10003443 Ga0105237_100034435 350
213 3300010375 Ga0105239_10040767 Ga0105239_100407676 350
214 3300013105 Ga0157369_10048415 Ga0157369_100484156 350
215 3300025302 Ga0207426_1000019 Ga0207426_1000019411 350
216 3300025904 Ga0207647_10033403 Ga0207647_100334031 350
217 3300025914 Ga0207671_10006199 Ga0207671_1000619916 350
218 3300025961 Ga0207712_10011532 Ga0207712_100115326 350
219 3300026041 Ga0207639_10050090 Ga0207639_100500904 350
220 3300031251 Ga0265327_10000531 Ga0265327_1000053132 350
221 3300044658 Ga0466972_0000003 Ga0466972_0000003_181101_182159 350
222 3300044765 Ga0466970_0005282 Ga0466970_0005282_4756_5814 350
223 3300047320 Ga0495672_0029210 Ga0495672_0029210_1791_2846 350
224 3300048927 Ga0496124_0020874 Ga0496124_0020874_4751_5818 350
225 3300049569 Ga0501032_0005376 Ga0501032_0005376_2326_3381 350
226 3300049571 Ga0501034_0000225 Ga0501034_0000225_70398_71462 350
227 3300049571 Ga0501034_0004706 Ga0501034_0004706_6290_7345 350
228 3300049571 Ga0501034_0008175 Ga0501034_0008175_8303_9361 350
229 3300049571 Ga0501034_0255722 Ga0501034_0255722_259_1416 350
230 3300049572 Ga0501036_0002360 Ga0501036_0002360_11168_12223 350
231 3300049573 Ga0501037_0003684 Ga0501037_0003684_9000_10055 350
232 3300049575 Ga0501039_0021736 Ga0501039_0021736_1267_2322 350
233 3300049579 Ga0501043_0014705 Ga0501043_0014705_2847_3902 350
234 3300049580 Ga0501046_0006183 Ga0501046_0006183_4349_5404 350
235 3300049581 Ga0501047_0007787 Ga0501047_0007787_1038_2093 350
236 3300049586 Ga0501070_0019278 Ga0501070_0019278_2234_3289 350
237 3300049590 Ga0501074_0000275 Ga0501074_0000275_4074_5129 350
238 3300049741 Ga0501079_0083642 Ga0501079_0083642_1128_2183 350
239 3300049742 Ga0501080_0021404 Ga0501080_0021404_2675_3730 350
240 3300049744 Ga0501083_0002224 Ga0501083_0002224_11355_12410 350
241 3300049822 Ga0501035_0020207 Ga0501035_0020207_3541_4596 350
242 3300049823 Ga0501044_0028371 Ga0501044_0028371_1743_2798 350
243 3300049823 Ga0501044_0079608 Ga0501044_0079608_2038_3195 350
244 3300050493 nmdc:mga0k408_21646_c1 nmdc:mga0k408_21646_c1_982_2037 350
245 3300053108 Ga0500562_000062 Ga0500562_000062_44168_45238 350
246 3300053156 Ga0500622_0000337 Ga0500622_0000337_33982_35052 350
247 iso_pu_bacteria 2818991460 2819680791 350
248 iso_pu_bacteria 2884791551 2884795542 350
249 iso_pu_bacteria 2929177148 2929178885 350
250 iso_pu_bacteria 2945977869 2945981288 350
251 iso_pu_bacteria 2946013367 2946019308 350
252 3300005339 Ga0070660_100088860 Ga0070660_1000888603 351
253 3300005530 Ga0070679_100462100 Ga0070679_1004621001 351
254 3300005539 Ga0068853_100031728 Ga0068853_1000317284 351
255 3300005563 Ga0068855_100015674 Ga0068855_1000156743 351
256 3300005834 Ga0068851_10107872 Ga0068851_101078722 351
257 3300006353 Ga0075370_10087508 Ga0075370_100875082 351
258 3300013102 Ga0157371_10003617 Ga0157371_100036176 351
259 3300013104 Ga0157370_10005999 Ga0157370_100059999 351
260 3300013307 Ga0157372_10003307 Ga0157372_1000330710 351
261 3300025919 Ga0207657_10097469 Ga0207657_100974691 351
262 3300025939 Ga0207665_10120637 Ga0207665_101206372 351
263 3300025949 Ga0207667_10016684 Ga0207667_100166848 351
264 3300031251 Ga0265327_10000117 Ga0265327_1000011776 351
265 3300036401 Ga0373937_0087775 Ga0373937_0087775_1558_2688 351
266 3300036401 Ga0373937_0437385 Ga0373937_0437385_60_1193 351
267 3300037466 Ga0395898_0132617 Ga0395898_0132617_95_1168 351
268 3300038443 Ga0395901_0070286 Ga0395901_0070286_1620_2693 351
269 3300044712 Ga0453684_0118168 Ga0453684_0118168_2013_3074 351
270 3300046517 Ga0495630_0071064 Ga0495630_0071064_1401_2531 351
271 3300047319 Ga0495674_0040485 Ga0495674_0040485_2257_3387 351
272 3300049688 Ga0501259_002123 Ga0501259_002123_513_1625 351
273 3300049763 Ga0501266_001388 Ga0501266_001388_1405_2517 351
274 iso_pu_bacteria 2818991442 2819573712 351
275 iso_pu_bacteria 2821136567 2821137046 351
276 iso_pu_bacteria 2904467357 2904468212 351
277 3300006195 Ga0075366_10037892 Ga0075366_100378922 352
278 3300010375 Ga0105239_10385535 Ga0105239_103855351 352
279 3300013306 Ga0163162_10000525 Ga0163162_1000052536 352
280 3300014326 Ga0157380_10226124 Ga0157380_102261242 352
281 3300014968 Ga0157379_10228870 Ga0157379_102288702 352
282 3300014969 Ga0157376_10024073 Ga0157376_100240733 352
283 3300047472 Ga0495686_0035983 Ga0495686_0035983_1369_2433 352
284 3300049568 Ga0501031_0024294 Ga0501031_0024294_1063_2124 352
285 3300049569 Ga0501032_0083186 Ga0501032_0083186_276_1337 352
286 3300049572 Ga0501036_0018399 Ga0501036_0018399_4498_5559 352
287 3300049573 Ga0501037_0024114 Ga0501037_0024114_663_1724 352
288 3300049574 Ga0501038_0006153 Ga0501038_0006153_9652_10713 352
289 3300049575 Ga0501039_0025106 Ga0501039_0025106_3454_4515 352
290 3300049580 Ga0501046_0104709 Ga0501046_0104709_840_1901 352
291 3300049742 Ga0501080_0151397 Ga0501080_0151397_478_1539 352
292 3300049822 Ga0501035_0105327 Ga0501035_0105327_425_1486 352
293 3300049823 Ga0501044_0014310 Ga0501044_0014310_1118_2179 352
294 3300003761 Ga0055535_1005974 Ga0055535_10059742 353
295 3300005329 Ga0070683_100366959 Ga0070683_1003669592 353
296 3300005356 Ga0070674_100024372 Ga0070674_1000243722 353
297 3300005459 Ga0068867_100118193 Ga0068867_1001181932 353
298 3300005577 Ga0068857_100255482 Ga0068857_1002554822 353
299 3300013100 Ga0157373_10018157 Ga0157373_100181572 353
300 3300013102 Ga0157371_10007345 Ga0157371_100073456 353
301 3300013307 Ga0157372_10025301 Ga0157372_100253013 353
302 3300025242 Ga0209258_100293 Ga0209258_10029327 353
303 3300025254 Ga0209148_1000278 Ga0209148_100027849 353
304 3300025940 Ga0207691_10278585 Ga0207691_102785851 353
305 3300025972 Ga0207668_10093946 Ga0207668_100939463 353
306 3300026116 Ga0207674_10249047 Ga0207674_102490471 353
307 3300037418 Ga0395900_0187282 Ga0395900_0187282_226_1299 353
308 3300037471 Ga0395905_0013318 Ga0395905_0013318_1583_2656 353
309 3300046616 Ga0495668_0001941 Ga0495668_0001941_7284_8348 353
310 3300049569 Ga0501032_0086674 Ga0501032_0086674_238_1368 353
311 3300049574 Ga0501038_0263668 Ga0501038_0263668_151_1269 353
312 3300049580 Ga0501046_0054596 Ga0501046_0054596_1866_2996 353
313 3300049582 Ga0501048_0113300 Ga0501048_0113300_185_1315 353
314 3300049583 Ga0501067_0059420 Ga0501067_0059420_663_1793 353
315 3300049586 Ga0501070_0083130 Ga0501070_0083130_1032_2162 353
316 3300049589 Ga0501073_0069514 Ga0501073_0069514_640_1770 353
317 3300049742 Ga0501080_0101764 Ga0501080_0101764_1273_2403 353
318 3300053088 Ga0500644_0000119 Ga0500644_0000119_37261_38325 353
319 3300053090 Ga0500646_0007808 Ga0500646_0007808_1138_2202 353
320 3300053109 Ga0500569_000060 Ga0500569_000060_8757_9821 353
321 3300053136 Ga0500559_0002093 Ga0500559_0002093_7106_8167 353
322 3300053142 Ga0500577_0001453 Ga0500577_0001453_95_1159 353
323 3300053147 Ga0500589_026122 Ga0500589_026122_549_1613 353
324 3300053160 Ga0500633_0010041 Ga0500633_0010041_1355_2419 353
325 3300053177 Ga0500636_0050476 Ga0500636_0050476_308_1369 353
326 3300054114 Ga0501084_0058489 Ga0501084_0058489_638_1768 353
327 3300003323 rootH1_10040112 rootH1_1004011216 354
328 3300025302 Ga0207426_1000051 Ga0207426_1000051248 354
329 3300044658 Ga0466972_0059546 Ga0466972_0059546_497_1567 354
330 3300044735 Ga0466968_0037102 Ga0466968_0037102_310_1401 354
331 3300044842 Ga0466957_0253452 Ga0466957_0253452_53_1123 354
332 3300045049 Ga0466959_0035012 Ga0466959_0035012_2301_3371 354
333 3300049822 Ga0501035_0364212 Ga0501035_0364212_92_1180 354
334 3300015265 Ga0182005_1000304 Ga0182005_100030412 355
335 3300025208 Ga0209436_103746 Ga0209436_1037463 355
336 3300049581 Ga0501047_0006288 Ga0501047_0006288_9682_10752 355
337 3300049823 Ga0501044_0011915 Ga0501044_0011915_7333_8403 355
338 3300003322 rootL2_10009667 rootL2_1000966712 356
339 3300003322 rootL2_10019698 rootL2_100196982 356
340 3300003322 rootL2_10103824 rootL2_101038245 356

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01479

S4

S4 domain

36

82

0.94

PF00849

PseudoU_synth_2

RNA pseudouridylate synthase

110

269

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1prz-assembly1.cif.gz_A crystal structure of pseudouridine synthase rlud catalytic module 0.9194 96 356
1dm9-assembly1.cif.gz_A heat shock protein 15 kd 0.9087 35 82
1v9f-assembly1.cif.gz_A crystal structure of catalytic domain of pseudouridine synthase rlud from escherichia coli 0.8959 96 352
1prz-assembly1.cif.gz_A crystal structure of pseudouridine synthase rlud catalytic module 0.8946 96 356
8d8k-assembly1.cif.gz_D yeast mitochondrial small subunit assembly intermediate (state 2) 0.8912 37 84
ID Description Score Start End Superfamily
af_A0A1D6LMW4_57_127_3.10.290.10 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.9489 24 86 3.10.290.10
1v9fA01 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9459 102 333 3.30.2350.10
1v9fA01 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9412 102 333 3.30.2350.10
af_Q2FZ78_82_304_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9234 103 348 3.30.2350.10
af_Q2FZ78_82_304_3.30.2350.10 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9153 103 348 3.30.2350.10
ID Description Score Start End GO Terms
AF-A0A4V6JRJ8-F1-model_v4 deleted 0.9682 159 351
AF-A0A4Q6AYX2-F1-model_v4 RluA family pseudouridine synthase 0.9637 200 355 GO:0000455
GO:0003723
GO:0009982
GO:0140098
AF-A0A2E0UIN5-F1-model_v4 RNA pseudouridine synthase 0.9611 184 348 GO:0000455
GO:0003723
GO:0009982
GO:0140098
AF-A0A3D6CGS0-F1-model_v4 Pseudouridine synthase (EC 5.4.99.-) 0.96 100 352 GO:0000455
GO:0003723
GO:0009982
GO:0140098
AF-A0A6J4IF04-F1-model_v4 Ribosomal large subunit pseudouridine synthase D (EC 5.4.99.23) 0.958 228 350 GO:0000455
GO:0003723
GO:0160140

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pLDDT pTM Quality
83.12 0.72 High
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