F414420

General Info

Members Datasets Scaffolds Average Seq Length
340 207 303 225

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0149251|Ga0395900_0149251_971_1741
Length 256
Sequence MSVDETSRDHPSHPALPTVIGGAMRAPRPAPATAPPQPVQQAEPRRVRVALLDDHEVLLESIASWMRSNAQDFDVVLTAASWLQLVHSPAFPTDLVFIDVQLKEPVSIEARVRTCRAAGAKVVVLTGLDTADLRERALKAGASAFVSKSQPLGEVMAVAREVMGLASGTPVPRPWRPLPAAAVALEKPRLSVGEEEALRLYAGGRSTLEVAEEMHVQFETAKTYLRRVREKYAKVRRPASRKADLIRRAAEDGYLQ

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2643221549 Agromyces sp. Root1464 Isolate Unclassified
3 2643221572 Leifsonia sp. Root60 Isolate Unclassified
4 2643221616 Leifsonia sp. Root227 Isolate Unclassified
5 2643221619 Agromyces sp. Root81 Isolate Unclassified
6 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
7 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
8 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
9 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
10 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
11 2808606372 Agromyces sp. 23-23 Isolate Unclassified
12 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
13 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
14 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
15 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
16 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
17 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
18 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
19 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
20 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
21 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
22 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
23 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
24 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
25 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
26 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
27 2928153084 Leifsonia sp. 563 Isolate Unclassified
28 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
29 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
30 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
31 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
32 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
33 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
34 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
35 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
36 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
37 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
38 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
39 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
40 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
41 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
42 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
43 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
44 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
45 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
46 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
47 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
48 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
49 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
50 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
51 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
52 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
53 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
54 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
55 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
56 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
57 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
58 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
59 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
60 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
61 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
62 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
63 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
64 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
65 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
66 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
67 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
68 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
69 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
70 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
71 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
72 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
73 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
74 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
75 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
76 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
77 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
78 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
79 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
80 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
81 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
82 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
83 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
84 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
85 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
86 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
87 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
90 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
92 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
93 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
94 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
95 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
96 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
97 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
125 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
126 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
127 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
132 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
133 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
134 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
135 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
136 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
137 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
138 3300041463 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_7 MetaG Metagenome Rhizoplane
139 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
140 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
141 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
142 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
143 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
144 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
147 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
148 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
149 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
150 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
151 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
152 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
155 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
156 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
157 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
158 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
159 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
160 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
161 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
162 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
163 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
164 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
170 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
171 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
172 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
179 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
180 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
181 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
182 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
183 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
184 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
187 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
190 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
191 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
192 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
193 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
194 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
195 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
196 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
197 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
198 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
199 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
200 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
201 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
202 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
203 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
204 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
205 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
206 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
207 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.53
Metatranscriptomes 0.59
Isolates 10.88

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 18.24
Nodule 0
Rhizoplane 2.65
Rhizosphere 63.82
Stem 0
Stem Tuber 0.29
Unclassified 14.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10020049 3300001979 Bacteria 2343
2 JGI24739J22299_10049527 3300001989 Bacteria 1362
3 JGI24737J22298_10017573 3300001990 Bacteria 2302
4 JGI24735J21928_10000275 3300002067 Bacteria 17956
5 JGI25162J39368_1013407 3300002737 Bacteria 906
6 JGI25164J39214_1000705 3300002772 Bacteria 12919
7 JGI25165J46597_1000148 3300003214 Bacteria 116003
8 rootL2_10245014 3300003322 Bacteria 1817
9 rootH1_10278645 3300003323 Bacteria 1490
10 Ga0006562J51391_1031215 3300003578 Bacteria 13998
11 Ga0006562J51391_1031216 3300003578 Bacteria 12410
12 Ga0055527_1000003 3300003760 Bacteria 705001
13 Ga0055542_1000066 3300003762 Bacteria 154802
14 Ga0055529_1000006 3300003763 Bacteria 416978
15 Ga0070658_10000044 3300005327 Bacteria 131465
16 Ga0070666_10074082 3300005335 Bacteria 2320
17 Ga0068868_100005115 3300005338 Bacteria 9207
18 Ga0070660_100003777 3300005339 Bacteria 10468
19 Ga0070660_100194727 3300005339 Bacteria 1642
20 Ga0070661_100125610 3300005344 Bacteria 1924
21 Ga0070688_100270442 3300005365 Bacteria 1217
22 Ga0070688_100350697 3300005365 Bacteria 1080
23 Ga0070659_100000468 3300005366 Bacteria 29797
24 Ga0070659_100004109 3300005366 Bacteria 10376
25 Ga0070667_100046127 3300005367 Bacteria 3665
26 Ga0070710_10356183 3300005437 Bacteria 970
27 Ga0070663_100037258 3300005455 Bacteria 3384
28 Ga0070685_10007740 3300005466 Bacteria 5501
29 Ga0070685_10104005 3300005466 Bacteria 1738
30 Ga0068853_100005958 3300005539 Bacteria 9631
31 Ga0070665_100335277 3300005548 Bacteria 1517
32 Ga0068855_100008855 3300005563 Bacteria 12166
33 Ga0068855_100053904 3300005563 Bacteria 4730
34 Ga0068857_100016497 3300005577 Bacteria 6472
35 Ga0068857_100129157 3300005577 Bacteria 2278
36 Ga0068852_100015472 3300005616 Bacteria 5920
37 Ga0068852_100219991 3300005616 Bacteria 1805
38 Ga0068859_100560019 3300005617 Bacteria 1237
39 Ga0068864_100106421 3300005618 Bacteria 2494
40 Ga0068861_100022031 3300005719 Bacteria 4585
41 Ga0068851_10000001 3300005834 Bacteria 495512
42 Ga0068858_100000016 3300005842 Bacteria 193130
43 Ga0068862_100047745 3300005844 Bacteria 3655
44 Ga0075365_10009299 3300006038 Bacteria 5638
45 Ga0075365_10043687 3300006038 Bacteria 2934
46 Ga0075364_10003572 3300006051 Bacteria 8858
47 Ga0075364_10064624 3300006051 Bacteria 2402
48 Ga0075369_10014595 3300006186 Bacteria 3142
49 Ga0075369_10116094 3300006186 Bacteria 1209
50 Ga0097620_100560040 3300006931 Bacteria 1237
51 Ga0105240_10012524 3300009093 Bacteria 11702
52 Ga0105240_10031443 3300009093 Bacteria 6883
53 Ga0105240_11083851 3300009093 Bacteria 853
54 Ga0105247_10061217 3300009101 Bacteria 2334
55 Ga0105243_10391809 3300009148 Bacteria 1288
56 Ga0105243_10526223 3300009148 Bacteria 1125
57 Ga0105241_10000615 3300009174 Bacteria 26776
58 Ga0105242_11051187 3300009176 Bacteria 825
59 Ga0105248_10000366 3300009177 Bacteria 52614
60 Ga0105237_10049583 3300009545 Bacteria 4220
61 Ga0105238_10002701 3300009551 Bacteria 17645
62 Ga0105238_10337785 3300009551 Bacteria 1494
63 Ga0105239_10123907 3300010375 Bacteria 2871
64 Ga0105239_10698173 3300010375 Bacteria 1160
65 Ga0105239_10900900 3300010375 Bacteria 1015
66 Ga0105246_10177061 3300011119 Bacteria 1639
67 Ga0157370_10019374 3300013104 Bacteria 6827
68 Ga0157369_11162641 3300013105 Bacteria 788
69 Ga0157374_10067724 3300013296 Bacteria 3357
70 Ga0157374_10464089 3300013296 Bacteria 1268
71 Ga0157372_10705743 3300013307 Bacteria 1174
72 Ga0163163_10016114 3300014325 Bacteria 6934
73 Ga0157380_10019385 3300014326 Bacteria 5069
74 Ga0157379_10004671 3300014968 Bacteria 11754
75 Ga0209672_100003 3300025228 Bacteria 1560476
76 Ga0209147_102480 3300025229 Bacteria 4547
77 Ga0207427_100039 3300025231 Bacteria 291576
78 Ga0209437_100397 3300025233 Bacteria 40909
79 Ga0209258_102952 3300025242 Bacteria 3965
80 Ga0209148_1000004 3300025254 Bacteria 1844481
81 Ga0209148_1001296 3300025254 Bacteria 13504
82 Ga0209233_1000014 3300025261 Bacteria 996641
83 Ga0209455_1000046 3300025272 Bacteria 382681
84 Ga0209455_1003450 3300025272 Bacteria 5589
85 Ga0207656_10000005 3300025321 Bacteria 490514
86 Ga0207647_10237815 3300025904 Bacteria 1046
87 Ga0207705_10000001 3300025909 Bacteria 2061880
88 Ga0207705_10069065 3300025909 Bacteria 2559
89 Ga0207705_10559700 3300025909 Bacteria 889
90 Ga0207654_10000001 3300025911 Bacteria 1816198
91 Ga0207695_10005079 3300025913 Bacteria 17638
92 Ga0207695_10006863 3300025913 Bacteria 14655
93 Ga0207671_10000016 3300025914 Bacteria 435413
94 Ga0207657_10016809 3300025919 Bacteria 7045
95 Ga0207657_10193330 3300025919 Bacteria 1640
96 Ga0207694_10000022 3300025924 Bacteria 288900
97 Ga0207659_10799110 3300025926 Bacteria 810
98 Ga0207690_10005064 3300025932 Bacteria 7782
99 Ga0207690_10019420 3300025932 Bacteria 4184
100 Ga0207709_10079957 3300025935 Bacteria 2104
101 Ga0207709_10302515 3300025935 Bacteria 1190
102 Ga0207711_10002007 3300025941 Bacteria 18405
103 Ga0207667_10002729 3300025949 Bacteria 21826
104 Ga0207667_10019698 3300025949 Bacteria 7521
105 Ga0207667_10022980 3300025949 Bacteria 6875
106 Ga0207667_10099171 3300025949 Bacteria 3005
107 Ga0207667_11059701 3300025949 Bacteria 796
108 Ga0207668_10234621 3300025972 Bacteria 1481
109 Ga0207640_10503222 3300025981 Bacteria 1009
110 Ga0207658_10077945 3300025986 Bacteria 2530
111 Ga0207677_10007608 3300026023 Bacteria 6009
112 Ga0207703_10000075 3300026035 Bacteria 118422
113 Ga0207639_10009364 3300026041 Bacteria 6753
114 Ga0207678_10037605 3300026067 Bacteria 4209
115 Ga0207678_10086168 3300026067 Bacteria 2684
116 Ga0207678_10331639 3300026067 Bacteria 1310
117 Ga0207676_10072176 3300026095 Bacteria 2774
118 Ga0207676_10097421 3300026095 Bacteria 2430
119 Ga0207674_10003463 3300026116 Bacteria 19302
120 Ga0207675_100066075 3300026118 Bacteria 3380
121 Ga0207698_10001474 3300026142 Bacteria 13682
122 Ga0207698_10027606 3300026142 Bacteria 4033
123 Ga0268266_10765022 3300028379 Bacteria 932
124 Ga0268265_10111676 3300028380 Bacteria 2233
125 Ga0307515_10071140 3300028794 Bacteria 4719
126 Ga0307515_10072752 3300028794 Bacteria 4632
127 Ga0307408_100221252 3300031548 Bacteria 1545
128 Ga0307408_100424876 3300031548 Bacteria 1147
129 Ga0307514_10007776 3300031649 Bacteria 9214
130 Ga0307514_10279921 3300031649 Bacteria 955
131 Ga0307406_10344724 3300031901 Bacteria 1162
132 Ga0307409_100287142 3300031995 Bacteria 1524
133 Ga0307409_100327911 3300031995 Bacteria 1435
134 Ga0307409_100835525 3300031995 Bacteria 931
135 Ga0307416_100975816 3300032002 Bacteria 950
136 Ga0307414_10549282 3300032004 Bacteria 1029
137 Ga0307415_100390330 3300032126 Bacteria 1185
138 Ga0395899_0023796 3300037312 Bacteria 4635
139 Ga0395900_0002826 3300037418 Bacteria 18949
140 Ga0395900_0082634 3300037418 Bacteria 3300
141 Ga0395900_0149251 3300037418 Bacteria 2389
142 Ga0395898_0001288 3300037466 Bacteria 36834
143 Ga0439465_0273527 3300041413 Bacteria 628
144 Ga0451793_1906561 3300041452 Bacteria 1872
145 Ga0451802_0466332 3300041460 Bacteria 901
146 Ga0451804_0356226 3300041463 Bacteria 1053
147 Ga0451833_0576229 3300041491 Bacteria 1099
148 Ga0466972_0023764 3300044658 Bacteria 3047
149 Ga0466965_0018376 3300044683 Bacteria 3351
150 Ga0466961_0039465 3300044693 Bacteria 3027
151 Ga0466961_0174988 3300044693 Bacteria 1334
152 Ga0466961_0187781 3300044693 Bacteria 1282
153 Ga0466970_0016305 3300044765 Bacteria 3827
154 Ga0466970_0020895 3300044765 Bacteria 3406
155 Ga0466970_0046931 3300044765 Bacteria 2301
156 Ga0466970_0248897 3300044765 Bacteria 995
157 Ga0466960_0041582 3300044901 Bacteria 2178
158 Ga0466959_0136521 3300045049 Bacteria 1736
159 Ga0466959_0206468 3300045049 Bacteria 1366
160 Ga0495590_0000140 3300046457 Bacteria 43471
161 Ga0495638_0215157 3300046460 Bacteria 1077
162 Ga0495672_0145224 3300047320 Bacteria 1235
163 Ga0495686_0053646 3300047472 Bacteria 2526
164 Ga0496102_0112250 3300048905 Bacteria 2542
165 Ga0496102_0210201 3300048905 Bacteria 1835
166 Ga0496103_0209796 3300048906 Bacteria 1253
167 Ga0496105_0566020 3300048908 Bacteria 885
168 Ga0496108_0379068 3300048911 Bacteria 1235
169 Ga0496114_0051282 3300048917 Bacteria 3435
170 Ga0496117_0000214 3300048920 Bacteria 111723
171 Ga0496117_0003162 3300048920 Bacteria 19583
172 Ga0496117_0004162 3300048920 Bacteria 16171
173 Ga0496117_0018832 3300048920 Bacteria 5698
174 Ga0496117_0044299 3300048920 Bacteria 3225
175 Ga0496118_0000450 3300048921 Bacteria 68053
176 Ga0496118_0109522 3300048921 Bacteria 1838
177 Ga0496119_0002891 3300048922 Bacteria 18335
178 Ga0496119_0009074 3300048922 Bacteria 8617
179 Ga0496119_0060480 3300048922 Bacteria 2267
180 Ga0496120_0000257 3300048923 Bacteria 88760
181 Ga0496120_0041970 3300048923 Bacteria 2674
182 Ga0496120_0059449 3300048923 Bacteria 2142
183 Ga0496121_0000025 3300048924 Bacteria 453467
184 Ga0496122_0000846 3300048925 Bacteria 57849
185 Ga0496122_0006061 3300048925 Bacteria 14088
186 Ga0496122_0026111 3300048925 Bacteria 5050
187 Ga0496122_0142299 3300048925 Bacteria 1498
188 Ga0496123_0001986 3300048926 Bacteria 26463
189 Ga0496123_0035141 3300048926 Bacteria 3577
190 Ga0496123_0035639 3300048926 Bacteria 3542
191 Ga0496124_0000070 3300048927 Bacteria 220875
192 Ga0496124_0135704 3300048927 Bacteria 1948
193 Ga0496126_0019093 3300048929 Bacteria 6762
194 Ga0496126_0138075 3300048929 Bacteria 2101
195 Ga0496126_0195442 3300048929 Bacteria 1711
196 Ga0501031_0028155 3300049568 Bacteria 3663
197 Ga0501032_0005400 3300049569 Bacteria 9505
198 Ga0501032_0010679 3300049569 Bacteria 6610
199 Ga0501033_0006022 3300049570 Bacteria 9512
200 Ga0501033_0107557 3300049570 Bacteria 2031
201 Ga0501033_0115281 3300049570 Bacteria 1952
202 Ga0501033_0325258 3300049570 Bacteria 1080
203 Ga0501034_0004586 3300049571 Bacteria 15305
204 Ga0501034_0023395 3300049571 Bacteria 6296
205 Ga0501034_0046151 3300049571 Bacteria 4402
206 Ga0501034_0055835 3300049571 Bacteria 3974
207 Ga0501034_0064954 3300049571 Bacteria 3662
208 Ga0501034_0275461 3300049571 Bacteria 1623
209 Ga0501034_0277427 3300049571 Bacteria 1616
210 Ga0501034_0422937 3300049571 Bacteria 1253
211 Ga0501034_0552673 3300049571 Bacteria 1060
212 Ga0501036_0009803 3300049572 Bacteria 7887
213 Ga0501036_0080449 3300049572 Bacteria 2754
214 Ga0501036_0414979 3300049572 Bacteria 1122
215 Ga0501037_0007031 3300049573 Bacteria 8218
216 Ga0501037_0196525 3300049573 Bacteria 1426
217 Ga0501037_0605597 3300049573 Bacteria 735
218 Ga0501038_0036210 3300049574 Bacteria 4331
219 Ga0501039_0015586 3300049575 Bacteria 5816
220 Ga0501039_0021853 3300049575 Bacteria 4909
221 Ga0501039_0674543 3300049575 Bacteria 809
222 Ga0501040_0117272 3300049576 Bacteria 1866
223 Ga0501042_0022233 3300049578 Bacteria 4430
224 Ga0501042_0147218 3300049578 Bacteria 1698
225 Ga0501043_0016279 3300049579 Bacteria 5832
226 Ga0501043_0040456 3300049579 Bacteria 3663
227 Ga0501043_0075143 3300049579 Bacteria 2654
228 Ga0501043_0141166 3300049579 Bacteria 1886
229 Ga0501043_0147198 3300049579 Bacteria 1843
230 Ga0501046_0001605 3300049580 Bacteria 21628
231 Ga0501047_0060752 3300049581 Bacteria 3646
232 Ga0501047_0100464 3300049581 Bacteria 2772
233 Ga0501047_0233800 3300049581 Bacteria 1690
234 Ga0501047_0845040 3300049581 Bacteria 729
235 Ga0501048_0203992 3300049582 Bacteria 1402
236 Ga0501048_0332578 3300049582 Bacteria 1082
237 Ga0501067_0035620 3300049583 Bacteria 2764
238 Ga0501068_0288770 3300049584 Bacteria 1049
239 Ga0501069_0070340 3300049585 Bacteria 1960
240 Ga0501069_0207100 3300049585 Bacteria 1138
241 Ga0501070_0000767 3300049586 Bacteria 29231
242 Ga0501070_0000810 3300049586 Bacteria 28411
243 Ga0501070_0004466 3300049586 Bacteria 12014
244 Ga0501070_0128427 3300049586 Bacteria 2094
245 Ga0501071_0463719 3300049587 Bacteria 970
246 Ga0501072_0161415 3300049588 Bacteria 1788
247 Ga0501073_0000012 3300049589 Bacteria 161319
248 Ga0501073_0032106 3300049589 Bacteria 3745
249 Ga0501073_0134643 3300049589 Bacteria 1712
250 Ga0501080_0000025 3300049742 Bacteria 89908
251 Ga0501080_0015659 3300049742 Bacteria 6992
252 Ga0501080_0161713 3300049742 Bacteria 2068
253 Ga0501080_0304183 3300049742 Bacteria 1446
254 Ga0501083_0056642 3300049744 Bacteria 2626
255 Ga0501035_0009567 3300049822 Bacteria 9012
256 Ga0501035_0052422 3300049822 Bacteria 3650
257 Ga0501035_0052965 3300049822 Bacteria 3630
258 Ga0501035_0055533 3300049822 Bacteria 3535
259 Ga0501044_0052805 3300049823 Bacteria 4184
260 Ga0501044_0145553 3300049823 Bacteria 2355
261 Ga0501044_0862194 3300049823 Bacteria 782
262 Ga0501045_0003070 3300049824 Bacteria 11424
263 nmdc:mga00v17_4046_c1 3300050491 Bacteria 7580
264 nmdc:mga00v17_44356_c1 3300050491 Bacteria 2681
265 nmdc:mga0yw44_3112_c2 3300050492 Bacteria 4275
266 nmdc:mga0yw44_4710_c1 3300050492 Bacteria 6311
267 nmdc:mga0sz30_104864_c1 3300050516 Bacteria 1236
268 Ga0500635_0000056 3300053080 Bacteria 73518
269 Ga0500651_0000383 3300053093 Bacteria 24162
270 Ga0500556_0000087 3300053104 Bacteria 86120
271 Ga0500562_000745 3300053108 Bacteria 7914
272 Ga0500593_003388 3300053117 Bacteria 6012
273 Ga0500655_001473 3300053133 Bacteria 4465
274 Ga0500559_0000357 3300053136 Bacteria 34081
275 Ga0500559_0000556 3300053136 Bacteria 25849
276 Ga0500559_0050842 3300053136 Bacteria 1829
277 Ga0500559_0082736 3300053136 Bacteria 1461
278 Ga0500559_0086668 3300053136 Bacteria 1429
279 Ga0500559_0094786 3300053136 Bacteria 1370
280 Ga0500559_0180806 3300053136 Bacteria 993
281 Ga0500568_0000091 3300053139 Bacteria 85759
282 Ga0500568_0005210 3300053139 Bacteria 6772
283 Ga0500568_0014459 3300053139 Bacteria 3563
284 Ga0500573_0000011 3300053140 Bacteria 209484
285 Ga0500573_0000930 3300053140 Bacteria 13356
286 Ga0500573_0002611 3300053140 Bacteria 9068
287 Ga0500573_0020846 3300053140 Bacteria 3752
288 Ga0500573_0028881 3300053140 Bacteria 3195
289 Ga0500573_0032637 3300053140 Bacteria 3004
290 Ga0500573_0044099 3300053140 Bacteria 2572
291 Ga0500573_0079911 3300053140 Bacteria 1859
292 Ga0500573_0105030 3300053140 Bacteria 1586
293 Ga0500573_0277790 3300053140 Bacteria 849
294 Ga0500577_0001608 3300053142 Bacteria 5777
295 Ga0500577_0013447 3300053142 Bacteria 2500
296 Ga0500577_0032708 3300053142 Bacteria 1832
297 Ga0500577_0160078 3300053142 Bacteria 958
298 Ga0500590_005025 3300053148 Bacteria 6331
299 Ga0500616_0000021 3300053153 Bacteria 484527
300 Ga0500616_0000109 3300053153 Bacteria 152604
301 Ga0500616_0033837 3300053153 Bacteria 2787
302 Ga0500620_000021 3300053155 Bacteria 31688
303 Ga0501084_0115693 3300054114 Bacteria 2254

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0147198 Ga0501043_0147198_1279_1818 175
2 3300025935 Ga0207709_10302515 Ga0207709_103025152 188
3 3300032004 Ga0307414_10549282 Ga0307414_105492821 190
4 3300041413 Ga0439465_0273527 Ga0439465_0273527_18_617 191
5 3300048929 Ga0496126_0195442 Ga0496126_0195442_965_1633 195
6 3300048920 Ga0496117_0000214 Ga0496117_0000214_67102_67833 196
7 3300048925 Ga0496122_0006061 Ga0496122_0006061_9423_10154 196
8 3300048926 Ga0496123_0035639 Ga0496123_0035639_2130_2861 196
9 3300053142 Ga0500577_0001608 Ga0500577_0001608_1098_1766 197
10 3300053153 Ga0500616_0000021 Ga0500616_0000021_88923_89654 198
11 3300053080 Ga0500635_0000056 Ga0500635_0000056_20536_21225 199
12 3300049569 Ga0501032_0010679 Ga0501032_0010679_996_1616 202
13 3300049570 Ga0501033_0006022 Ga0501033_0006022_2930_3550 202
14 3300049571 Ga0501034_0023395 Ga0501034_0023395_2467_3087 202
15 3300049575 Ga0501039_0015586 Ga0501039_0015586_663_1283 202
16 3300049578 Ga0501042_0022233 Ga0501042_0022233_3614_4234 202
17 3300049582 Ga0501048_0332578 Ga0501048_0332578_426_1046 202
18 3300049583 Ga0501067_0035620 Ga0501067_0035620_432_1052 202
19 3300049584 Ga0501068_0288770 Ga0501068_0288770_246_866 202
20 3300049585 Ga0501069_0070340 Ga0501069_0070340_837_1457 202
21 3300049587 Ga0501071_0463719 Ga0501071_0463719_133_753 202
22 3300049822 Ga0501035_0052422 Ga0501035_0052422_164_784 202
23 3300005327 Ga0070658_10000044 Ga0070658_1000004412 203
24 3300005455 Ga0070663_100037258 Ga0070663_1000372585 203
25 3300005563 Ga0068855_100008855 Ga0068855_10000885512 203
26 3300013104 Ga0157370_10019374 Ga0157370_100193745 203
27 3300025909 Ga0207705_10000001 Ga0207705_100000011462 203
28 3300025949 Ga0207667_10099171 Ga0207667_100991713 203
29 3300026067 Ga0207678_10037605 Ga0207678_100376055 203
30 iso_pu_bacteria 8046352972 8046355815 203
31 3300005339 Ga0070660_100194727 Ga0070660_1001947272 204
32 3300005365 Ga0070688_100270442 Ga0070688_1002704422 204
33 3300005366 Ga0070659_100004109 Ga0070659_1000041096 204
34 3300005466 Ga0070685_10104005 Ga0070685_101040052 204
35 3300005618 Ga0068864_100106421 Ga0068864_1001064212 204
36 3300005719 Ga0068861_100022031 Ga0068861_1000220314 204
37 3300005844 Ga0068862_100047745 Ga0068862_1000477453 204
38 3300009148 Ga0105243_10391809 Ga0105243_103918092 204
39 3300009176 Ga0105242_11051187 Ga0105242_110511871 204
40 3300011119 Ga0105246_10177061 Ga0105246_101770612 204
41 3300014326 Ga0157380_10019385 Ga0157380_100193852 204
42 3300025919 Ga0207657_10193330 Ga0207657_101933302 204
43 3300025926 Ga0207659_10799110 Ga0207659_107991101 204
44 3300025932 Ga0207690_10019420 Ga0207690_100194205 204
45 3300025935 Ga0207709_10079957 Ga0207709_100799572 204
46 3300025949 Ga0207667_11059701 Ga0207667_110597011 204
47 3300025972 Ga0207668_10234621 Ga0207668_102346212 204
48 3300026067 Ga0207678_10086168 Ga0207678_100861683 204
49 3300026095 Ga0207676_10097421 Ga0207676_100974212 204
50 3300026118 Ga0207675_100066075 Ga0207675_1000660753 204
51 3300028380 Ga0268265_10111676 Ga0268265_101116761 204
52 3300031548 Ga0307408_100221252 Ga0307408_1002212522 204
53 3300031548 Ga0307408_100424876 Ga0307408_1004248762 204
54 3300031901 Ga0307406_10344724 Ga0307406_103447242 204
55 3300031995 Ga0307409_100287142 Ga0307409_1002871422 204
56 3300031995 Ga0307409_100327911 Ga0307409_1003279111 204
57 3300032126 Ga0307415_100390330 Ga0307415_1003903301 204
58 3300037418 Ga0395900_0002826 Ga0395900_0002826_8198_8824 204
59 3300048905 Ga0496102_0112250 Ga0496102_0112250_936_1586 204
60 3300048911 Ga0496108_0379068 Ga0496108_0379068_427_1077 204
61 3300049571 Ga0501034_0055835 Ga0501034_0055835_2628_3254 204
62 3300049572 Ga0501036_0009803 Ga0501036_0009803_1161_1787 204
63 3300049576 Ga0501040_0117272 Ga0501040_0117272_507_1133 204
64 3300049579 Ga0501043_0016279 Ga0501043_0016279_793_1419 204
65 3300049579 Ga0501043_0141166 Ga0501043_0141166_10_636 204
66 3300049589 Ga0501073_0134643 Ga0501073_0134643_655_1281 204
67 3300049822 Ga0501035_0009567 Ga0501035_0009567_2222_2848 204
68 3300049823 Ga0501044_0145553 Ga0501044_0145553_185_811 204
69 iso_pu_bacteria 2643221549 2643769562 204
70 iso_pu_bacteria 2643221619 2644114181 204
71 iso_pu_bacteria 2721755702 2723642846 204
72 iso_pu_bacteria 2808606372 2808902839 204
73 iso_pu_bacteria 2919443155 2919443414 204
74 iso_pu_bacteria 2935409751 2935412982 204
75 3300009093 Ga0105240_10012524 Ga0105240_100125245 205
76 3300009174 Ga0105241_10000615 Ga0105241_100006159 205
77 3300049573 Ga0501037_0605597 Ga0501037_0605597_83_712 207
78 iso_pu_bacteria 2643221619 2644111754 207
79 3300049581 Ga0501047_0845040 Ga0501047_0845040_24_656 208
80 3300050491 nmdc:mga00v17_44356_c1 nmdc:mga00v17_44356_c1_1110_1739 208
81 3300050516 nmdc:mga0sz30_104864_c1 nmdc:mga0sz30_104864_c1_145_774 208
82 3300053104 Ga0500556_0000087 Ga0500556_0000087_8980_9609 208
83 3300053117 Ga0500593_003388 Ga0500593_003388_4142_4771 208
84 iso_pu_bacteria 2585428094 2587863911 208
85 3300041460 Ga0451802_0466332 Ga0451802_0466332_17_649 209
86 3300049571 Ga0501034_0552673 Ga0501034_0552673_216_848 209
87 3300049579 Ga0501043_0075143 Ga0501043_0075143_1699_2331 209
88 3300049581 Ga0501047_0060752 Ga0501047_0060752_1376_2008 209
89 3300049586 Ga0501070_0000810 Ga0501070_0000810_26152_26784 209
90 3300049742 Ga0501080_0000025 Ga0501080_0000025_64705_65337 209
91 3300049744 Ga0501083_0056642 Ga0501083_0056642_952_1584 209
92 3300053136 Ga0500559_0094786 Ga0500559_0094786_277_909 209
93 3300053140 Ga0500573_0002611 Ga0500573_0002611_838_1470 209
94 3300054114 Ga0501084_0115693 Ga0501084_0115693_786_1418 209
95 3300048925 Ga0496122_0000846 Ga0496122_0000846_9363_10049 210
96 3300048926 Ga0496123_0001986 Ga0496123_0001986_15515_16201 210
97 iso_pu_bacteria 2852643534 2852646403 210
98 iso_pu_bacteria 2857733635 2857736094 211
99 3300031995 Ga0307409_100835525 Ga0307409_1008355252 212
100 iso_pu_bacteria 2643221635 2644197952 212
101 3300049581 Ga0501047_0100464 Ga0501047_0100464_1184_1837 213
102 3300053136 Ga0500559_0086668 Ga0500559_0086668_681_1331 213
103 3300053136 Ga0500559_0180806 Ga0500559_0180806_18_668 213
104 iso_pu_bacteria 2919443155 2919443660 213
105 3300003323 rootH1_10278645 rootH1_102786452 214
106 iso_pu_bacteria 2643221572 2643877833 214
107 iso_pu_bacteria 2643221669 2644384888 214
108 iso_pu_bacteria 2895660088 2895662700 214
109 3300032002 Ga0307416_100975816 Ga0307416_1009758162 215
110 iso_pu_bacteria 2643221616 2644094856 215
111 iso_pu_bacteria 8046352972 8046355637 215
112 iso_pu_bacteria 2884763398 2884764296 216
113 3300046460 Ga0495638_0215157 Ga0495638_0215157_100_807 217
114 3300049575 Ga0501039_0674543 Ga0501039_0674543_88_789 217
115 iso_pu_bacteria 2643221632 2644181102 217
116 3300053136 Ga0500559_0050842 Ga0500559_0050842_1004_1672 219
117 3300053140 Ga0500573_0000930 Ga0500573_0000930_9956_10618 219
118 3300002737 JGI25162J39368_1013407 JGI25162J39368_10134072 220
119 3300002772 JGI25164J39214_1000705 JGI25164J39214_100070510 220
120 3300003214 JGI25165J46597_1000148 JGI25165J46597_100014844 220
121 3300025231 Ga0207427_100039 Ga0207427_100039202 220
122 3300025233 Ga0209437_100397 Ga0209437_10039713 220
123 3300025261 Ga0209233_1000014 Ga0209233_1000014316 220
124 3300048905 Ga0496102_0210201 Ga0496102_0210201_763_1431 221
125 3300048908 Ga0496105_0566020 Ga0496105_0566020_102_770 221
126 3300048917 Ga0496114_0051282 Ga0496114_0051282_1321_1989 221
127 3300048929 Ga0496126_0138075 Ga0496126_0138075_853_1557 221
128 3300049568 Ga0501031_0028155 Ga0501031_0028155_747_1415 221
129 3300049569 Ga0501032_0005400 Ga0501032_0005400_2207_2875 221
130 3300049570 Ga0501033_0107557 Ga0501033_0107557_160_828 221
131 3300049570 Ga0501033_0115281 Ga0501033_0115281_473_1159 221
132 3300049571 Ga0501034_0004586 Ga0501034_0004586_12668_13336 221
133 3300049572 Ga0501036_0080449 Ga0501036_0080449_117_785 221
134 3300049572 Ga0501036_0414979 Ga0501036_0414979_89_775 221
135 3300049573 Ga0501037_0007031 Ga0501037_0007031_30_698 221
136 3300049573 Ga0501037_0196525 Ga0501037_0196525_438_1124 221
137 3300049574 Ga0501038_0036210 Ga0501038_0036210_3476_4144 221
138 3300049575 Ga0501039_0021853 Ga0501039_0021853_517_1185 221
139 3300049578 Ga0501042_0147218 Ga0501042_0147218_994_1662 221
140 3300049579 Ga0501043_0040456 Ga0501043_0040456_30_698 221
141 3300049580 Ga0501046_0001605 Ga0501046_0001605_8597_9265 221
142 3300049581 Ga0501047_0233800 Ga0501047_0233800_589_1275 221
143 3300049582 Ga0501048_0203992 Ga0501048_0203992_323_1009 221
144 3300049586 Ga0501070_0128427 Ga0501070_0128427_835_1521 221
145 3300049588 Ga0501072_0161415 Ga0501072_0161415_727_1395 221
146 3300049742 Ga0501080_0161713 Ga0501080_0161713_509_1177 221
147 3300049822 Ga0501035_0055533 Ga0501035_0055533_2838_3506 221
148 3300049823 Ga0501044_0052805 Ga0501044_0052805_3027_3695 221
149 3300049823 Ga0501044_0862194 Ga0501044_0862194_25_711 221
150 3300049824 Ga0501045_0003070 Ga0501045_0003070_2394_3062 221
151 3300053140 Ga0500573_0044099 Ga0500573_0044099_683_1396 221
152 3300037312 Ga0395899_0023796 Ga0395899_0023796_1202_1870 222
153 3300037418 Ga0395900_0082634 Ga0395900_0082634_563_1231 222
154 3300037466 Ga0395898_0001288 Ga0395898_0001288_5791_6459 222
155 3300044765 Ga0466970_0016305 Ga0466970_0016305_2457_3158 222
156 3300044765 Ga0466970_0248897 Ga0466970_0248897_232_933 222
157 3300048906 Ga0496103_0209796 Ga0496103_0209796_349_1050 222
158 3300048920 Ga0496117_0004162 Ga0496117_0004162_10951_11652 222
159 3300048921 Ga0496118_0000450 Ga0496118_0000450_39171_39872 222
160 3300048922 Ga0496119_0060480 Ga0496119_0060480_987_1688 222
161 3300048923 Ga0496120_0059449 Ga0496120_0059449_782_1483 222
162 3300048925 Ga0496122_0026111 Ga0496122_0026111_2521_3222 222
163 3300048926 Ga0496123_0035141 Ga0496123_0035141_225_926 222
164 3300048927 Ga0496124_0000070 Ga0496124_0000070_178707_179408 222
165 3300048927 Ga0496124_0135704 Ga0496124_0135704_588_1289 222
166 3300003760 Ga0055527_1000003 Ga0055527_100000362 223
167 3300003762 Ga0055542_1000066 Ga0055542_100006675 223
168 3300003763 Ga0055529_1000006 Ga0055529_100000662 223
169 3300025228 Ga0209672_100003 Ga0209672_100003901 223
170 3300025229 Ga0209147_102480 Ga0209147_1024803 223
171 3300025242 Ga0209258_102952 Ga0209258_1029524 223
172 3300025254 Ga0209148_1000004 Ga0209148_10000041196 223
173 3300025272 Ga0209455_1000046 Ga0209455_1000046215 223
174 3300048924 Ga0496121_0000025 Ga0496121_0000025_338563_339240 223
175 3300049586 Ga0501070_0000767 Ga0501070_0000767_898_1572 223
176 3300049822 Ga0501035_0052965 Ga0501035_0052965_958_1632 223
177 3300053140 Ga0500573_0020846 Ga0500573_0020846_885_1574 223
178 3300005548 Ga0070665_100335277 Ga0070665_1003352771 224
179 3300006038 Ga0075365_10009299 Ga0075365_100092996 224
180 3300006038 Ga0075365_10043687 Ga0075365_100436873 224
181 3300006051 Ga0075364_10003572 Ga0075364_100035727 224
182 3300006051 Ga0075364_10064624 Ga0075364_100646243 224
183 3300006186 Ga0075369_10014595 Ga0075369_100145955 224
184 3300006186 Ga0075369_10116094 Ga0075369_101160942 224
185 3300028379 Ga0268266_10765022 Ga0268266_107650222 224
186 3300041452 Ga0451793_1906561 Ga0451793_1906561_308_985 224
187 3300048920 Ga0496117_0044299 Ga0496117_0044299_1893_2570 224
188 3300049571 Ga0501034_0275461 Ga0501034_0275461_471_1148 224
189 3300049571 Ga0501034_0422937 Ga0501034_0422937_207_884 224
190 3300050491 nmdc:mga00v17_4046_c1 nmdc:mga00v17_4046_c1_2671_3351 224
191 3300050492 nmdc:mga0yw44_3112_c2 nmdc:mga0yw44_3112_c2_1488_2168 224
192 3300050492 nmdc:mga0yw44_4710_c1 nmdc:mga0yw44_4710_c1_5502_6191 224
193 3300053133 Ga0500655_001473 Ga0500655_001473_259_939 224
194 3300053136 Ga0500559_0000357 Ga0500559_0000357_11046_11726 224
195 3300053136 Ga0500559_0082736 Ga0500559_0082736_650_1330 224
196 3300053153 Ga0500616_0033837 Ga0500616_0033837_1060_1740 224
197 iso_pu_bacteria 2862993130 2862994523 224
198 iso_pu_bacteria 2870622029 2870624833 224
199 3300003322 rootL2_10245014 rootL2_102450142 225
200 3300048929 Ga0496126_0019093 Ga0496126_0019093_1570_2253 225
201 3300049585 Ga0501069_0207100 Ga0501069_0207100_85_768 225
202 3300049586 Ga0501070_0004466 Ga0501070_0004466_8437_9120 225
203 3300049589 Ga0501073_0000012 Ga0501073_0000012_58815_59525 225
204 3300049742 Ga0501080_0015659 Ga0501080_0015659_5686_6369 225
205 3300053108 Ga0500562_000745 Ga0500562_000745_5945_6637 225
206 3300053139 Ga0500568_0014459 Ga0500568_0014459_177_857 225
207 3300053140 Ga0500573_0105030 Ga0500573_0105030_26_739 225
208 3300044683 Ga0466965_0018376 Ga0466965_0018376_1987_2712 226
209 3300044765 Ga0466970_0020895 Ga0466970_0020895_707_1432 226
210 3300044901 Ga0466960_0041582 Ga0466960_0041582_210_935 226
211 3300049571 Ga0501034_0064954 Ga0501034_0064954_379_1062 226
212 3300053140 Ga0500573_0000011 Ga0500573_0000011_24977_25660 226
213 3300044658 Ga0466972_0023764 Ga0466972_0023764_833_1594 227
214 3300048922 Ga0496119_0009074 Ga0496119_0009074_5195_5881 227
215 3300048923 Ga0496120_0041970 Ga0496120_0041970_570_1256 227
216 3300049742 Ga0501080_0304183 Ga0501080_0304183_19_708 227
217 3300053136 Ga0500559_0000556 Ga0500559_0000556_16961_17656 227
218 iso_pu_bacteria 2751185788 2753302685 227
219 iso_pu_bacteria 2857737099 2857737637 227
220 iso_pu_bacteria 2904430863 2904433513 227
221 iso_pu_bacteria 2904501621 2904503983 227
222 iso_pu_bacteria 2908674828 2908676948 227
223 iso_pu_bacteria 2909074476 2909076876 227
224 iso_pu_bacteria 2919039151 2919039488 227
225 iso_pu_bacteria 2919042368 2919042883 227
226 iso_pu_bacteria 2928104781 2928106152 227
227 iso_pu_bacteria 2928500415 2928502090 227
228 iso_pu_bacteria 2939657138 2939660355 227
229 iso_pu_bacteria 2964326757 2964327483 227
230 iso_pu_bacteria 2966921586 2966923636 227
231 iso_pu_bacteria 2984551494 2984554834 227
232 3300049570 Ga0501033_0325258 Ga0501033_0325258_226_912 228
233 3300049571 Ga0501034_0277427 Ga0501034_0277427_228_914 228
234 3300053140 Ga0500573_0028881 Ga0500573_0028881_1977_2666 228
235 3300053140 Ga0500573_0032637 Ga0500573_0032637_1507_2196 228
236 3300053142 Ga0500577_0032708 Ga0500577_0032708_618_1307 228
237 3300053142 Ga0500577_0160078 Ga0500577_0160078_166_855 228
238 3300031649 Ga0307514_10007776 Ga0307514_100077764 229
239 3300053139 Ga0500568_0000091 Ga0500568_0000091_61046_61738 229
240 3300053140 Ga0500573_0079911 Ga0500573_0079911_204_899 229
241 3300025272 Ga0209455_1003450 Ga0209455_10034503 230
242 3300049571 Ga0501034_0046151 Ga0501034_0046151_2379_3074 230
243 3300049589 Ga0501073_0032106 Ga0501073_0032106_2206_2901 230
244 3300053139 Ga0500568_0005210 Ga0500568_0005210_4580_5275 230
245 iso_pu_bacteria 2928153084 2928154806 230
246 3300028794 Ga0307515_10071140 Ga0307515_100711403 231
247 3300028794 Ga0307515_10072752 Ga0307515_100727526 231
248 3300048920 Ga0496117_0003162 Ga0496117_0003162_1787_2482 231
249 3300048925 Ga0496122_0142299 Ga0496122_0142299_465_1160 231
250 3300053140 Ga0500573_0277790 Ga0500573_0277790_119_817 231
251 3300053142 Ga0500577_0013447 Ga0500577_0013447_908_1606 231
252 3300053153 Ga0500616_0000109 Ga0500616_0000109_126599_127297 231
253 3300005437 Ga0070710_10356183 Ga0070710_103561832 232
254 3300046457 Ga0495590_0000140 Ga0495590_0000140_5291_5998 232
255 3300047320 Ga0495672_0145224 Ga0495672_0145224_265_972 232
256 3300047472 Ga0495686_0053646 Ga0495686_0053646_1237_1944 232
257 3300005335 Ga0070666_10074082 Ga0070666_100740823 233
258 3300005338 Ga0068868_100005115 Ga0068868_10000511510 233
259 3300005339 Ga0070660_100003777 Ga0070660_1000037778 233
260 3300005344 Ga0070661_100125610 Ga0070661_1001256103 233
261 3300005365 Ga0070688_100350697 Ga0070688_1003506972 233
262 3300005366 Ga0070659_100000468 Ga0070659_1000004685 233
263 3300005367 Ga0070667_100046127 Ga0070667_1000461272 233
264 3300005466 Ga0070685_10007740 Ga0070685_100077406 233
265 3300005539 Ga0068853_100005958 Ga0068853_1000059584 233
266 3300005563 Ga0068855_100053904 Ga0068855_1000539044 233
267 3300005577 Ga0068857_100016497 Ga0068857_1000164975 233
268 3300005577 Ga0068857_100129157 Ga0068857_1001291573 233
269 3300005616 Ga0068852_100015472 Ga0068852_1000154722 233
270 3300005616 Ga0068852_100219991 Ga0068852_1002199912 233
271 3300005617 Ga0068859_100560019 Ga0068859_1005600191 233
272 3300005834 Ga0068851_10000001 Ga0068851_1000000145 233
273 3300005842 Ga0068858_100000016 Ga0068858_10000001698 233
274 3300006931 Ga0097620_100560040 Ga0097620_1005600401 233
275 3300009093 Ga0105240_10031443 Ga0105240_100314433 233
276 3300009093 Ga0105240_11083851 Ga0105240_110838511 233
277 3300009101 Ga0105247_10061217 Ga0105247_100612173 233
278 3300009148 Ga0105243_10526223 Ga0105243_105262231 233
279 3300009177 Ga0105248_10000366 Ga0105248_1000036627 233
280 3300009545 Ga0105237_10049583 Ga0105237_100495834 233
281 3300009551 Ga0105238_10002701 Ga0105238_1000270113 233
282 3300009551 Ga0105238_10337785 Ga0105238_103377852 233
283 3300010375 Ga0105239_10123907 Ga0105239_101239074 233
284 3300010375 Ga0105239_10698173 Ga0105239_106981732 233
285 3300010375 Ga0105239_10900900 Ga0105239_109009002 233
286 3300013296 Ga0157374_10067724 Ga0157374_100677242 233
287 3300013296 Ga0157374_10464089 Ga0157374_104640892 233
288 3300013307 Ga0157372_10705743 Ga0157372_107057432 233
289 3300014325 Ga0163163_10016114 Ga0163163_100161147 233
290 3300014968 Ga0157379_10004671 Ga0157379_1000467113 233
291 3300025254 Ga0209148_1001296 Ga0209148_10012965 233
292 3300025321 Ga0207656_10000005 Ga0207656_10000005434 233
293 3300025909 Ga0207705_10069065 Ga0207705_100690653 233
294 3300025909 Ga0207705_10559700 Ga0207705_105597001 233
295 3300025911 Ga0207654_10000001 Ga0207654_10000001994 233
296 3300025913 Ga0207695_10005079 Ga0207695_100050796 233
297 3300025913 Ga0207695_10006863 Ga0207695_100068637 233
298 3300025914 Ga0207671_10000016 Ga0207671_1000001624 233
299 3300025919 Ga0207657_10016809 Ga0207657_100168095 233
300 3300025924 Ga0207694_10000022 Ga0207694_100000226 233
301 3300025932 Ga0207690_10005064 Ga0207690_100050647 233
302 3300025941 Ga0207711_10002007 Ga0207711_100020071 233
303 3300025949 Ga0207667_10002729 Ga0207667_100027298 233
304 3300025949 Ga0207667_10019698 Ga0207667_100196982 233
305 3300025949 Ga0207667_10022980 Ga0207667_100229803 233
306 3300025981 Ga0207640_10503222 Ga0207640_105032222 233
307 3300025986 Ga0207658_10077945 Ga0207658_100779453 233
308 3300026023 Ga0207677_10007608 Ga0207677_100076082 233
309 3300026035 Ga0207703_10000075 Ga0207703_1000007534 233
310 3300026041 Ga0207639_10009364 Ga0207639_100093644 233
311 3300026067 Ga0207678_10331639 Ga0207678_103316392 233
312 3300026095 Ga0207676_10072176 Ga0207676_100721763 233
313 3300026116 Ga0207674_10003463 Ga0207674_1000346315 233
314 3300026142 Ga0207698_10001474 Ga0207698_100014742 233
315 3300026142 Ga0207698_10027606 Ga0207698_100276064 233
316 3300031649 Ga0307514_10279921 Ga0307514_102799212 233
317 3300037418 Ga0395900_0149251 Ga0395900_0149251_971_1741 233
318 3300041463 Ga0451804_0356226 Ga0451804_0356226_106_828 233
319 3300041491 Ga0451833_0576229 Ga0451833_0576229_280_1002 233
320 3300044693 Ga0466961_0039465 Ga0466961_0039465_1436_2200 233
321 3300044693 Ga0466961_0174988 Ga0466961_0174988_565_1314 233
322 3300044693 Ga0466961_0187781 Ga0466961_0187781_252_1016 233
323 3300044765 Ga0466970_0046931 Ga0466970_0046931_403_1152 233
324 3300045049 Ga0466959_0136521 Ga0466959_0136521_58_807 233
325 3300045049 Ga0466959_0206468 Ga0466959_0206468_89_853 233
326 3300048920 Ga0496117_0018832 Ga0496117_0018832_165_887 233
327 3300048921 Ga0496118_0109522 Ga0496118_0109522_465_1187 233
328 3300048922 Ga0496119_0002891 Ga0496119_0002891_3332_4054 233
329 3300048923 Ga0496120_0000257 Ga0496120_0000257_40708_41430 233
330 3300053093 Ga0500651_0000383 Ga0500651_0000383_642_1364 233
331 3300053148 Ga0500590_005025 Ga0500590_005025_5000_5722 233
332 3300053155 Ga0500620_000021 Ga0500620_000021_24122_24844 233
333 3300001979 JGI24740J21852_10020049 JGI24740J21852_100200492 234
334 3300001989 JGI24739J22299_10049527 JGI24739J22299_100495272 234
335 3300001990 JGI24737J22298_10017573 JGI24737J22298_100175733 234
336 3300002067 JGI24735J21928_10000275 JGI24735J21928_100002757 234
337 3300003578 Ga0006562J51391_1031215 Ga0006562J51391_10312156 234
338 3300003578 Ga0006562J51391_1031216 Ga0006562J51391_10312167 234
339 3300013105 Ga0157369_11162641 Ga0157369_111626411 234
340 3300025904 Ga0207647_10237815 Ga0207647_102378151 234

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

49

160

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wsz-assembly1.cif.gz_B crystal structure of the dna binding domains of wild type liar from e. faecalis 0.9275 168 231
5uxx-assembly1.cif.gz_A co-crystal structure of the sigma factor rpoe in complex with the anti-sigma factor nepr from bartonella quintana 0.9244 168 213
7ve5-assembly1.cif.gz_B c-terminal domain of vrar 0.9174 168 233
1zlj-assembly2.cif.gz_C crystal structure of the mycobacterium tuberculosis hypoxic response regulator dosr c-terminal domain 0.9101 167 229
3ulq-assembly1.cif.gz_B crystal structure of the anti-activator rapf complexed with the response regulator coma dna binding domain 0.9097 167 228
ID Description Score Start End Superfamily
2h27D00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9603 168 212 1.10.10.10
1or7A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9533 168 213 1.10.10.10
1yioA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9491 167 229 1.10.10.10
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9453 166 229 1.10.10.10
1zn2A02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9398 167 229 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A4U3G0H2-F1-model_v4 deleted 0.933 25 133
AF-A0A2H4VNB2-F1-model_v4 Response regulatory domain-containing protein 0.891 25 143 GO:0000160
AF-A0A1S8R6M8-F1-model_v4 deleted 0.8853 25 143
AF-A0A7K4DJK3-F1-model_v4 PAS domain S-box protein 0.8842 24 143 GO:0000160
GO:0005524
GO:0006355
GO:0016301
AF-A0A850BWX9-F1-model_v4 EAL domain-containing protein 0.8826 24 143 GO:0000160

Feature Viewer

pLDDT pTM Quality
79.57 0.53 Medium
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Predicted Structure (AlphaFold2)

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