F414276

General Info

Members Datasets Scaffolds Average Seq Length
340 176 624 325

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10016875|Ga0081455_100168756
Length 360
Sequence MNAAALALSDANQRPYSAIDPTSKLLHRRKQMKLEPKWLARCAALAMTAAVAQGTMPTGAQAQAYPNQDIRLICAFPPGSGADVLVRYFADKLRPIANRTVIVENKSGAGGNIAMEYVARARPDGHTIFVHAATAVAANQHLFKKPPVDAAKAFQIAASINRQPFMLVVDAKGPYKTVAELTEAMRKKGDKATYASAAPTGTIMGEIYKDVTGIKAVEVNYKTAPDSLNEMLGGKIDYGMHDPVFSLAQQREGRLRILAVSTATRLQANPDMPTMTESGVPMDLTGWWAAMLPAGTPKPIVDKVNQWFTEMVKSEETKTFLNGFGGDPFINTPDAAQALFLKAIKDWGDYVRLAKIVPQG

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
12 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
22 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
23 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
24 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
25 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
26 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
27 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
28 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
31 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
34 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
35 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
36 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
47 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
48 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
49 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
50 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
51 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
52 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
53 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
54 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
59 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
60 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
68 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
77 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
110 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
111 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
112 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
113 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
114 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
115 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
116 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
117 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
122 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
123 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
126 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
127 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
128 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
129 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
130 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
131 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
132 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
135 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
136 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
137 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
138 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
143 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
144 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
145 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
146 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
147 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
152 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
153 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
156 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
159 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
160 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
161 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
164 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
165 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
166 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
167 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
168 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
169 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
170 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
171 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
172 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
173 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
176 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.59
Nodule 0
Rhizoplane 7.35
Rhizosphere 70.29
Stem 0
Stem Tuber 0
Unclassified 6.47

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10016875 3300005937 Bacteria 7021
2 rootH1_10319178 3300003323 Bacteria 1326
3 Ga0065707_10232841 3300005295 Bacteria 1182
4 Ga0070658_10091863 3300005327 Bacteria 2502
5 Ga0070676_10118101 3300005328 Bacteria 1661
6 Ga0070690_100250566 3300005330 Bacteria 1252
7 Ga0070677_10002712 3300005333 Bacteria 5663
8 Ga0068869_100093361 3300005334 Bacteria 2267
9 Ga0070666_10108092 3300005335 Bacteria 1922
10 Ga0070680_100054452 3300005336 Bacteria 3267
11 Ga0068868_100024224 3300005338 Bacteria 4603
12 Ga0068868_100377443 3300005338 Bacteria 1219
13 Ga0070691_10001921 3300005341 Bacteria 9125
14 Ga0070692_10133288 3300005345 Bacteria 1398
15 Ga0070668_100470681 3300005347 Bacteria 1083
16 Ga0070671_100365487 3300005355 Bacteria 1232
17 Ga0070674_100062854 3300005356 Bacteria 2596
18 Ga0070673_100184750 3300005364 Bacteria 1786
19 Ga0070659_100358231 3300005366 Bacteria 1225
20 Ga0070667_100207838 3300005367 Bacteria 1739
21 Ga0070709_10127172 3300005434 Unclassified 1735
22 Ga0070709_10216172 3300005434 Bacteria 1365
23 Ga0070701_10005149 3300005438 Bacteria 5370
24 Ga0070711_100118416 3300005439 Bacteria 1955
25 Ga0070711_100189603 3300005439 Unclassified 1579
26 Ga0070705_100001191 3300005440 Bacteria 14159
27 Ga0070700_100001293 3300005441 Bacteria 12439
28 Ga0070694_100003405 3300005444 Bacteria 9533
29 Ga0070708_100043768 3300005445 Bacteria 3935
30 Ga0070663_100005802 3300005455 Bacteria 7375
31 Ga0070678_100002798 3300005456 Bacteria 9640
32 Ga0068867_100089155 3300005459 Bacteria 2338
33 Ga0070699_100000576 3300005518 Bacteria 34772
34 Ga0070679_100155242 3300005530 Unclassified 2264
35 Ga0070679_100170296 3300005530 Bacteria 2151
36 Ga0070697_100089226 3300005536 Bacteria 2547
37 Ga0070672_100322956 3300005543 Bacteria 1312
38 Ga0070695_100006879 3300005545 Bacteria 6736
39 Ga0070696_100000306 3300005546 Bacteria 29692
40 Ga0070704_100004023 3300005549 Bacteria 8485
41 Ga0068857_100002806 3300005577 Bacteria 14326
42 Ga0070702_100289473 3300005615 Bacteria 1128
43 Ga0068859_100000758 3300005617 Bacteria 32556
44 Ga0068864_100195747 3300005618 Bacteria 1855
45 Ga0068863_100133150 3300005841 Bacteria 2374
46 Ga0068858_100065503 3300005842 Bacteria 3362
47 Ga0068860_100005957 3300005843 Bacteria 12262
48 Ga0068860_100273865 3300005843 Bacteria 1648
49 Ga0068862_100003289 3300005844 Bacteria 13980
50 Ga0081455_10065072 3300005937 Bacteria 3051
51 Ga0081455_10131227 3300005937 Bacteria 1959
52 Ga0081538_10012498 3300005981 Bacteria 6803
53 Ga0081538_10054646 3300005981 Bacteria 2359
54 Ga0070717_10220727 3300006028 Bacteria 1666
55 Ga0075365_10003589 3300006038 Bacteria 8029
56 Ga0075365_10007957 3300006038 Bacteria 5979
57 Ga0075365_10029008 3300006038 Bacteria 3531
58 Ga0075365_10058625 3300006038 Bacteria 2564
59 Ga0075365_10099072 3300006038 Bacteria 1994
60 Ga0075365_10187155 3300006038 Bacteria 1448
61 Ga0075365_10217714 3300006038 Bacteria 1339
62 Ga0075365_10302739 3300006038 Bacteria 1125
63 Ga0075368_10001620 3300006042 Bacteria 7225
64 Ga0075368_10007757 3300006042 Bacteria 3801
65 Ga0075368_10058648 3300006042 Unclassified 1539
66 Ga0075363_100022829 3300006048 Unclassified 3166
67 Ga0075364_10044891 3300006051 Bacteria 2876
68 Ga0075364_10172025 3300006051 Bacteria 1464
69 Ga0070712_100023333 3300006175 Bacteria 4086
70 Ga0070712_100039791 3300006175 Unclassified 3219
71 Ga0070712_100043734 3300006175 Bacteria 3085
72 Ga0070712_100114284 3300006175 Bacteria 2021
73 Ga0075362_10014747 3300006177 Bacteria 3163
74 Ga0075362_10105101 3300006177 Bacteria 1324
75 Ga0075367_10002859 3300006178 Bacteria 8026
76 Ga0075367_10008406 3300006178 Bacteria 5347
77 Ga0075367_10065654 3300006178 Bacteria 2174
78 Ga0075369_10004166 3300006186 Bacteria 5323
79 Ga0075369_10004757 3300006186 Bacteria 5043
80 Ga0075369_10006910 3300006186 Bacteria 4309
81 Ga0075369_10075323 3300006186 Bacteria 1490
82 Ga0075369_10099810 3300006186 Unclassified 1302
83 Ga0097621_100088190 3300006237 Bacteria 2592
84 Ga0075370_10118515 3300006353 Unclassified 1540
85 Ga0068871_100036151 3300006358 Bacteria 3931
86 Ga0068871_100050216 3300006358 Bacteria 3374
87 Ga0075428_100029384 3300006844 Bacteria 6081
88 Ga0075428_100070286 3300006844 Bacteria 3827
89 Ga0075428_100076227 3300006844 Bacteria 3661
90 Ga0075428_100079946 3300006844 Bacteria 3568
91 Ga0075430_100017180 3300006846 Bacteria 6160
92 Ga0075430_100049485 3300006846 Bacteria 3548
93 Ga0075430_100309268 3300006846 Bacteria 1307
94 Ga0075431_100003433 3300006847 Bacteria 15370
95 Ga0075431_100012548 3300006847 Bacteria 8551
96 Ga0075431_100026605 3300006847 Bacteria 5935
97 Ga0075431_100032118 3300006847 Bacteria 5409
98 Ga0075431_100211557 3300006847 Bacteria 1980
99 Ga0075429_100066452 3300006880 Bacteria 3139
100 Ga0075429_100343476 3300006880 Bacteria 1307
101 Ga0097620_100000758 3300006931 Bacteria 32556
102 Ga0111539_10002463 3300009094 Bacteria 24585
103 Ga0111539_10338496 3300009094 Bacteria 1751
104 Ga0105245_10003619 3300009098 Bacteria 13789
105 Ga0105245_10005778 3300009098 Bacteria 10853
106 Ga0105245_10049178 3300009098 Bacteria 3775
107 Ga0105247_10120112 3300009101 Bacteria 1702
108 Ga0114129_10064528 3300009147 Bacteria 5111
109 Ga0114129_10151573 3300009147 Bacteria 3173
110 Ga0105243_10306007 3300009148 Bacteria 1442
111 Ga0105243_10393746 3300009148 Bacteria 1285
112 Ga0105242_10036432 3300009176 Bacteria 3947
113 Ga0105242_10168463 3300009176 Bacteria 1923
114 Ga0105248_10030536 3300009177 Bacteria 6018
115 Ga0105248_10030771 3300009177 Bacteria 5996
116 Ga0105248_10053800 3300009177 Bacteria 4516
117 Ga0105248_10074016 3300009177 Bacteria 3829
118 Ga0105238_10075186 3300009551 Bacteria 3370
119 Ga0105238_10120669 3300009551 Bacteria 2601
120 Ga0105238_10150004 3300009551 Bacteria 2306
121 Ga0105249_10002183 3300009553 Bacteria 16943
122 Ga0105246_10023222 3300011119 Bacteria 4011
123 Ga0105246_10088170 3300011119 Bacteria 2228
124 Ga0157378_10064479 3300013297 Bacteria 3277
125 Ga0157378_10225976 3300013297 Bacteria 1781
126 Ga0157378_10446482 3300013297 Bacteria 1283
127 Ga0157375_10298015 3300013308 Bacteria 1776
128 Ga0157380_10289810 3300014326 Bacteria 1502
129 Ga0213874_10045197 3300021377 Bacteria 1333
130 Ga0207653_10000675 3300025885 Bacteria 11718
131 Ga0207682_10000293 3300025893 Bacteria 22550
132 Ga0207688_10070582 3300025901 Bacteria 1981
133 Ga0207699_10149330 3300025906 Unclassified 1544
134 Ga0207645_10015371 3300025907 Bacteria 5088
135 Ga0207705_10187505 3300025909 Bacteria 1563
136 Ga0207693_10037211 3300025915 Bacteria 3835
137 Ga0207693_10048265 3300025915 Bacteria 3343
138 Ga0207693_10129470 3300025915 Bacteria 1984
139 Ga0207663_10162315 3300025916 Unclassified 1579
140 Ga0207663_10162844 3300025916 Bacteria 1577
141 Ga0207660_10018964 3300025917 Bacteria 4594
142 Ga0207687_10004959 3300025927 Bacteria 8833
143 Ga0207687_10010954 3300025927 Bacteria 5925
144 Ga0207686_10259696 3300025934 Bacteria 1273
145 Ga0207669_10072438 3300025937 Bacteria 2169
146 Ga0207704_10094296 3300025938 Bacteria 1976
147 Ga0207691_10333723 3300025940 Bacteria 1299
148 Ga0207691_10336326 3300025940 Bacteria 1293
149 Ga0207711_10044677 3300025941 Bacteria 3783
150 Ga0207667_10269498 3300025949 Bacteria 1741
151 Ga0207651_10029091 3300025960 Bacteria 3496
152 Ga0207712_10023380 3300025961 Bacteria 4077
153 Ga0207658_10228391 3300025986 Bacteria 1570
154 Ga0207677_10083771 3300026023 Bacteria 2296
155 Ga0207703_10046623 3300026035 Bacteria 3491
156 Ga0207703_10110143 3300026035 Bacteria 2348
157 Ga0207703_10225846 3300026035 Bacteria 1676
158 Ga0207678_10006372 3300026067 Bacteria 10477
159 Ga0207708_10001787 3300026075 Bacteria 15859
160 Ga0207708_10058192 3300026075 Bacteria 2949
161 Ga0207641_10085432 3300026088 Bacteria 2750
162 Ga0207648_10013530 3300026089 Bacteria 7586
163 Ga0207674_10002061 3300026116 Bacteria 25517
164 Ga0207675_100028714 3300026118 Bacteria 5182
165 Ga0207675_100122810 3300026118 Bacteria 2458
166 Ga0207683_10007625 3300026121 Bacteria 9269
167 Ga0209813_10002783 3300027866 Bacteria 4039
168 Ga0209813_10023361 3300027866 Bacteria 1758
169 Ga0268265_10005384 3300028380 Bacteria 8762
170 Ga0268264_10008733 3300028381 Bacteria 8411
171 Ga0268264_10212159 3300028381 Bacteria 1778
172 Ga0373935_0082408 3300035692 Unclassified 2093
173 Ga0373947_0029737 3300035725 Bacteria 3207
174 Ga0373947_0080501 3300035725 Bacteria 2015
175 Ga0373947_0279301 3300035725 Bacteria 1110
176 Ga0373925_0033220 3300037068 Bacteria 3803
177 Ga0373925_0078682 3300037068 Bacteria 2504
178 Ga0436364_1257509 3300037853 Bacteria 2228
179 Ga0436365_1176845 3300039437 Bacteria 6788
180 Ga0436360_0091450 3300039438 Bacteria 1339
181 Ga0436360_0949408 3300039438 Bacteria 4857
182 Ga0436363_1353404 3300039450 Bacteria 1940
183 Ga0439453_0001431 3300041408 Bacteria 3063
184 Ga0439460_0002031 3300042461 Bacteria 4848
185 Ga0439440_0014113 3300042993 Bacteria 1721
186 Ga0495592_0157777 3300046454 Unclassified 1564
187 Ga0495603_0200007 3300046455 Bacteria 1155
188 Ga0495638_0129268 3300046460 Bacteria 1485
189 Ga0495584_0003730 3300046491 Bacteria 8306
190 Ga0495607_0212822 3300046501 Bacteria 950
191 Ga0495618_0030721 3300046514 Bacteria 3357
192 Ga0495618_0185212 3300046514 Bacteria 1322
193 Ga0495630_0046746 3300046517 Bacteria 3236
194 Ga0495630_0058833 3300046517 Bacteria 2882
195 Ga0495621_0021921 3300046539 Bacteria 2111
196 Ga0495634_0041378 3300046642 Viruses 3129
197 Ga0495647_0069316 3300046681 Bacteria 1409
198 Ga0495624_0124188 3300046690 Unclassified 1585
199 Ga0495674_0142263 3300047319 Unclassified 2016
200 Ga0495674_0142996 3300047319 Bacteria 2010
201 Ga0495672_0085009 3300047320 Bacteria 1754
202 Ga0495684_0240794 3300047471 Bacteria 1320
203 Ga0495615_0014789 3300048090 Bacteria 1656
204 Ga0496100_0060329 3300048903 Bacteria 2496
205 Ga0496101_0064574 3300048904 Bacteria 2667
206 Ga0496101_0327006 3300048904 Bacteria 1203
207 Ga0496102_0003057 3300048905 Bacteria 14173
208 Ga0496102_0073091 3300048905 Archaea 3152
209 Ga0496102_0263999 3300048905 Unclassified 1623
210 Ga0496102_0293946 3300048905 Bacteria 1531
211 Ga0496102_0300780 3300048905 Bacteria 1512
212 Ga0496103_0004269 3300048906 Bacteria 8683
213 Ga0496104_0084945 3300048907 Bacteria 3021
214 Ga0496104_0115972 3300048907 Bacteria 2570
215 Ga0496104_0238600 3300048907 Bacteria 1730
216 Ga0496104_0388229 3300048907 Bacteria 1308
217 Ga0496105_0042852 3300048908 Bacteria 3732
218 Ga0496105_0115922 3300048908 Bacteria 2210
219 Ga0496105_0268356 3300048908 Bacteria 1379
220 Ga0496106_0006048 3300048909 Bacteria 8957
221 Ga0496106_0089969 3300048909 Bacteria 2368
222 Ga0496106_0335912 3300048909 Bacteria 1213
223 Ga0496107_0012193 3300048910 Bacteria 5998
224 Ga0496109_0291311 3300048912 Unclassified 1539
225 Ga0496110_0420922 3300048913 Unclassified 1218
226 Ga0496111_0276031 3300048914 Unclassified 1247
227 Ga0496112_0188579 3300048915 Unclassified 2024
228 Ga0496113_0260212 3300048916 Bacteria 1386
229 Ga0496126_0066360 3300048929 Unclassified 3227
230 Ga0501039_0138604 3300049575 Bacteria 1911
231 Ga0501039_0206664 3300049575 Bacteria 1544
232 Ga0501039_0340497 3300049575 Bacteria 1179
233 Ga0501046_0272399 3300049580 Bacteria 1241
234 Ga0501072_0074646 3300049588 Bacteria 2682
235 Ga0501072_0099164 3300049588 Bacteria 2316
236 Ga0501075_0016083 3300049591 Bacteria 5383
237 Ga0501075_0078534 3300049591 Bacteria 2498
238 Ga0501075_0112139 3300049591 Bacteria 2074
239 Ga0501075_0123979 3300049591 Bacteria 1967
240 Ga0501077_0095020 3300049593 Bacteria 1890
241 Ga0501077_0162874 3300049593 Bacteria 1416
242 Ga0501079_0065391 3300049741 Bacteria 2805
243 Ga0501079_0070477 3300049741 Bacteria 2700
244 Ga0501079_0165208 3300049741 Bacteria 1726
245 Ga0501081_0014311 3300049743 Bacteria 5229
246 Ga0501081_0076738 3300049743 Bacteria 2334
247 Ga0501081_0282212 3300049743 Bacteria 1216
248 Ga0501045_0116945 3300049824 Bacteria 1979
249 nmdc:mga03683_119895_c1 3300050489 Bacteria 1169
250 nmdc:mga03683_18754_c1 3300050489 Bacteria 2634
251 nmdc:mga03683_60555_c1 3300050489 Bacteria 1599
252 nmdc:mga03n38_130722_c1 3300050490 Bacteria 1244
253 nmdc:mga00v17_193221_c1 3300050491 Bacteria 1315
254 nmdc:mga00v17_26106_c1 3300050491 Bacteria 3399
255 nmdc:mga00v17_282681_c1 3300050491 Bacteria 1077
256 nmdc:mga00v17_90565_c1 3300050491 Bacteria 1921
257 nmdc:mga0yw44_13547_c1 3300050492 Bacteria 4298
258 nmdc:mga0yw44_15498_c1 3300050492 Bacteria 4086
259 nmdc:mga0yw44_168957_c1 3300050492 Bacteria 1435
260 nmdc:mga0yw44_23045_c1 3300050492 Bacteria 3503
261 nmdc:mga0yw44_308867_c1 3300050492 Bacteria 1061
262 nmdc:mga0yw44_33098_c1 3300050492 Bacteria 3018
263 nmdc:mga0yw44_62346_c1 3300050492 Bacteria 2290
264 nmdc:mga0k408_17251_c1 3300050493 Bacteria 4019
265 nmdc:mga06z11_3904_c1 3300050494 Bacteria 5814
266 nmdc:mga06z11_65682_c1 3300050494 Bacteria 1905
267 nmdc:mga04h51_22899_c1 3300050495 Bacteria 1896
268 nmdc:mga04h51_2948_c1 3300050495 Bacteria 4094
269 nmdc:mga04h51_9057_c1 3300050495 Bacteria 2684
270 nmdc:mga07m45_75592_c1 3300050496 Bacteria 1919
271 nmdc:mga05p37_130565_c1 3300050507 Bacteria 3082
272 nmdc:mga05p37_341064_c1 3300050507 Bacteria 1767
273 nmdc:mga05p37_701328_c1 3300050507 Bacteria 1124
274 nmdc:mga09592_32059_c1 3300050508 Bacteria 4380
275 nmdc:mga0qj67_270515_c1 3300050509 Bacteria 1378
276 nmdc:mga0qj67_38113_c1 3300050509 Bacteria 3770
277 nmdc:mga0qj67_384351_c1 3300050509 Bacteria 1133
278 nmdc:mga0qj67_63929_c1 3300050509 Bacteria 2926
279 nmdc:mga06r32_121225_c1 3300050510 Bacteria 2580
280 nmdc:mga06r32_131855_c1 3300050510 Bacteria 2472
281 nmdc:mga06r32_14122_c1 3300050510 Bacteria 7243
282 nmdc:mga06r32_258305_c1 3300050510 Bacteria 1730
283 nmdc:mga06r32_328173_c1 3300050510 Bacteria 1515
284 nmdc:mga08y16_117017_c1 3300050511 Bacteria 2775
285 nmdc:mga08y16_515097_c1 3300050511 Bacteria 1214
286 nmdc:mga0sz30_126169_c1 3300050516 Bacteria 1126
287 nmdc:mga0sz30_32075_c1 3300050516 Bacteria 2177
288 nmdc:mga0sz30_36919_c1 3300050516 Bacteria 2044
289 nmdc:mga0sz30_53151_c1 3300050516 Bacteria 1721
290 Ga0495601_0009217 3300053077 Bacteria 5834
291 Ga0495601_0091499 3300053077 Unclassified 1958
292 Ga0495601_0160203 3300053077 Bacteria 1470
293 Ga0500641_0048738 3300053096 Bacteria 1736
294 Ga0500595_002674 3300053119 Bacteria 8663
295 Ga0500595_004051 3300053119 Bacteria 6667
296 Ga0500595_019431 3300053119 Bacteria 2465
297 Ga0500595_036282 3300053119 Bacteria 1616
298 Ga0500652_000011 3300053131 Bacteria 160704
299 Ga0500652_000014 3300053131 Bacteria 147740
300 Ga0500652_000024 3300053131 Bacteria 116239
301 Ga0500636_0043635 3300053177 Bacteria 2647
302 Ga0500636_0060537 3300053177 Bacteria 2211
303 Ga0500636_0067940 3300053177 Bacteria 2070
304 Ga0500636_0074328 3300053177 Bacteria 1967
305 Ga0501084_0106210 3300054114 Bacteria 2359
306 Ga0501084_0109380 3300054114 Bacteria 2322
307 Ga0501084_0237485 3300054114 Bacteria 1539
308 Ga0501084_0245644 3300054114 Bacteria 1511
309 Ga0501084_0388507 3300054114 Bacteria 1179
310 Ga0501082_0036204 3300060353 Bacteria 4252
311 Ga0530510_0010078 3300061734 Bacteria 6625
312 Ga0530510_0068940 3300061734 Bacteria 2566
313 Ga0081455_10016875
314 rootH1_10319178
315 Ga0065707_10232841
316 Ga0070658_10091863
317 Ga0070676_10118101
318 Ga0070690_100250566
319 Ga0070677_10002712
320 Ga0068869_100093361
321 Ga0070666_10108092
322 Ga0070680_100054452
323 Ga0068868_100024224
324 Ga0068868_100377443
325 Ga0070691_10001921
326 Ga0070692_10133288
327 Ga0070668_100470681
328 Ga0070671_100365487
329 Ga0070674_100062854
330 Ga0070673_100184750
331 Ga0070659_100358231
332 Ga0070667_100207838
333 Ga0070709_10127172
334 Ga0070709_10216172
335 Ga0070701_10005149
336 Ga0070711_100118416
337 Ga0070711_100189603
338 Ga0070705_100001191
339 Ga0070700_100001293
340 Ga0070694_100003405
341 Ga0070708_100043768
342 Ga0070663_100005802
343 Ga0070678_100002798
344 Ga0068867_100089155
345 Ga0070699_100000576
346 Ga0070679_100155242
347 Ga0070679_100170296
348 Ga0070697_100089226
349 Ga0070672_100322956
350 Ga0070695_100006879
351 Ga0070696_100000306
352 Ga0070704_100004023
353 Ga0068857_100002806
354 Ga0070702_100289473
355 Ga0068859_100000758
356 Ga0068864_100195747
357 Ga0068863_100133150
358 Ga0068858_100065503
359 Ga0068860_100005957
360 Ga0068860_100273865
361 Ga0068862_100003289
362 Ga0081455_10065072
363 Ga0081455_10131227
364 Ga0081538_10012498
365 Ga0081538_10054646
366 Ga0070717_10220727
367 Ga0075365_10003589
368 Ga0075365_10007957
369 Ga0075365_10029008
370 Ga0075365_10058625
371 Ga0075365_10099072
372 Ga0075365_10187155
373 Ga0075365_10217714
374 Ga0075365_10302739
375 Ga0075368_10001620
376 Ga0075368_10007757
377 Ga0075368_10058648
378 Ga0075363_100022829
379 Ga0075364_10044891
380 Ga0075364_10172025
381 Ga0070712_100023333
382 Ga0070712_100039791
383 Ga0070712_100043734
384 Ga0070712_100114284
385 Ga0075362_10014747
386 Ga0075362_10105101
387 Ga0075367_10002859
388 Ga0075367_10008406
389 Ga0075367_10065654
390 Ga0075369_10004166
391 Ga0075369_10004757
392 Ga0075369_10006910
393 Ga0075369_10075323
394 Ga0075369_10099810
395 Ga0097621_100088190
396 Ga0075370_10118515
397 Ga0068871_100036151
398 Ga0068871_100050216
399 Ga0075428_100029384
400 Ga0075428_100070286
401 Ga0075428_100076227
402 Ga0075428_100079946
403 Ga0075430_100017180
404 Ga0075430_100049485
405 Ga0075430_100309268
406 Ga0075431_100003433
407 Ga0075431_100012548
408 Ga0075431_100026605
409 Ga0075431_100032118
410 Ga0075431_100211557
411 Ga0075429_100066452
412 Ga0075429_100343476
413 Ga0097620_100000758
414 Ga0111539_10002463
415 Ga0111539_10338496
416 Ga0105245_10003619
417 Ga0105245_10005778
418 Ga0105245_10049178
419 Ga0105247_10120112
420 Ga0114129_10064528
421 Ga0114129_10151573
422 Ga0105243_10306007
423 Ga0105243_10393746
424 Ga0105242_10036432
425 Ga0105242_10168463
426 Ga0105248_10030536
427 Ga0105248_10030771
428 Ga0105248_10053800
429 Ga0105248_10074016
430 Ga0105238_10075186
431 Ga0105238_10120669
432 Ga0105238_10150004
433 Ga0105249_10002183
434 Ga0105246_10023222
435 Ga0105246_10088170
436 Ga0157378_10064479
437 Ga0157378_10225976
438 Ga0157378_10446482
439 Ga0157375_10298015
440 Ga0157380_10289810
441 Ga0213874_10045197
442 Ga0207653_10000675
443 Ga0207682_10000293
444 Ga0207688_10070582
445 Ga0207699_10149330
446 Ga0207645_10015371
447 Ga0207705_10187505
448 Ga0207693_10037211
449 Ga0207693_10048265
450 Ga0207693_10129470
451 Ga0207663_10162315
452 Ga0207663_10162844
453 Ga0207660_10018964
454 Ga0207687_10004959
455 Ga0207687_10010954
456 Ga0207686_10259696
457 Ga0207669_10072438
458 Ga0207704_10094296
459 Ga0207691_10333723
460 Ga0207691_10336326
461 Ga0207711_10044677
462 Ga0207667_10269498
463 Ga0207651_10029091
464 Ga0207712_10023380
465 Ga0207658_10228391
466 Ga0207677_10083771
467 Ga0207703_10046623
468 Ga0207703_10110143
469 Ga0207703_10225846
470 Ga0207678_10006372
471 Ga0207708_10001787
472 Ga0207708_10058192
473 Ga0207641_10085432
474 Ga0207648_10013530
475 Ga0207674_10002061
476 Ga0207675_100028714
477 Ga0207675_100122810
478 Ga0207683_10007625
479 Ga0209813_10002783
480 Ga0209813_10023361
481 Ga0268265_10005384
482 Ga0268264_10008733
483 Ga0268264_10212159
484 Ga0373935_0082408
485 Ga0373947_0029737
486 Ga0373947_0080501
487 Ga0373947_0279301
488 Ga0373925_0033220
489 Ga0373925_0078682
490 Ga0436364_1257509
491 Ga0436365_1176845
492 Ga0436360_0091450
493 Ga0436360_0949408
494 Ga0436363_1353404
495 Ga0439453_0001431
496 Ga0439460_0002031
497 Ga0439440_0014113
498 Ga0495592_0157777
499 Ga0495603_0200007
500 Ga0495638_0129268
501 Ga0495584_0003730
502 Ga0495607_0212822
503 Ga0495618_0030721
504 Ga0495618_0185212
505 Ga0495630_0046746
506 Ga0495630_0058833
507 Ga0495621_0021921
508 Ga0495634_0041378
509 Ga0495647_0069316
510 Ga0495624_0124188
511 Ga0495674_0142263
512 Ga0495674_0142996
513 Ga0495672_0085009
514 Ga0495684_0240794
515 Ga0495615_0014789
516 Ga0496100_0060329
517 Ga0496101_0064574
518 Ga0496101_0327006
519 Ga0496102_0003057
520 Ga0496102_0073091
521 Ga0496102_0263999
522 Ga0496102_0293946
523 Ga0496102_0300780
524 Ga0496103_0004269
525 Ga0496104_0084945
526 Ga0496104_0115972
527 Ga0496104_0238600
528 Ga0496104_0388229
529 Ga0496105_0042852
530 Ga0496105_0115922
531 Ga0496105_0268356
532 Ga0496106_0006048
533 Ga0496106_0089969
534 Ga0496106_0335912
535 Ga0496107_0012193
536 Ga0496109_0291311
537 Ga0496110_0420922
538 Ga0496111_0276031
539 Ga0496112_0188579
540 Ga0496113_0260212
541 Ga0496126_0066360
542 Ga0501039_0138604
543 Ga0501039_0206664
544 Ga0501039_0340497
545 Ga0501046_0272399
546 Ga0501072_0074646
547 Ga0501072_0099164
548 Ga0501075_0016083
549 Ga0501075_0078534
550 Ga0501075_0112139
551 Ga0501075_0123979
552 Ga0501077_0095020
553 Ga0501077_0162874
554 Ga0501079_0065391
555 Ga0501079_0070477
556 Ga0501079_0165208
557 Ga0501081_0014311
558 Ga0501081_0076738
559 Ga0501081_0282212
560 Ga0501045_0116945
561 nmdc:mga03683_119895_c1
562 nmdc:mga03683_18754_c1
563 nmdc:mga03683_60555_c1
564 nmdc:mga03n38_130722_c1
565 nmdc:mga00v17_193221_c1
566 nmdc:mga00v17_26106_c1
567 nmdc:mga00v17_282681_c1
568 nmdc:mga00v17_90565_c1
569 nmdc:mga0yw44_13547_c1
570 nmdc:mga0yw44_15498_c1
571 nmdc:mga0yw44_168957_c1
572 nmdc:mga0yw44_23045_c1
573 nmdc:mga0yw44_308867_c1
574 nmdc:mga0yw44_33098_c1
575 nmdc:mga0yw44_62346_c1
576 nmdc:mga0k408_17251_c1
577 nmdc:mga06z11_3904_c1
578 nmdc:mga06z11_65682_c1
579 nmdc:mga04h51_22899_c1
580 nmdc:mga04h51_2948_c1
581 nmdc:mga04h51_9057_c1
582 nmdc:mga07m45_75592_c1
583 nmdc:mga05p37_130565_c1
584 nmdc:mga05p37_341064_c1
585 nmdc:mga05p37_701328_c1
586 nmdc:mga09592_32059_c1
587 nmdc:mga0qj67_270515_c1
588 nmdc:mga0qj67_38113_c1
589 nmdc:mga0qj67_384351_c1
590 nmdc:mga0qj67_63929_c1
591 nmdc:mga06r32_121225_c1
592 nmdc:mga06r32_131855_c1
593 nmdc:mga06r32_14122_c1
594 nmdc:mga06r32_258305_c1
595 nmdc:mga06r32_328173_c1
596 nmdc:mga08y16_117017_c1
597 nmdc:mga08y16_515097_c1
598 nmdc:mga0sz30_126169_c1
599 nmdc:mga0sz30_32075_c1
600 nmdc:mga0sz30_36919_c1
601 nmdc:mga0sz30_53151_c1
602 Ga0495601_0009217
603 Ga0495601_0091499
604 Ga0495601_0160203
605 Ga0500641_0048738
606 Ga0500595_002674
607 Ga0500595_004051
608 Ga0500595_019431
609 Ga0500595_036282
610 Ga0500652_000011
611 Ga0500652_000014
612 Ga0500652_000024
613 Ga0500636_0043635
614 Ga0500636_0060537
615 Ga0500636_0067940
616 Ga0500636_0074328
617 Ga0501084_0106210
618 Ga0501084_0109380
619 Ga0501084_0237485
620 Ga0501084_0245644
621 Ga0501084_0388507
622 Ga0501082_0036204
623 Ga0530510_0010078
624 Ga0530510_0068940

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

85

354

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9071 28 309
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.8896 27 309
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.8886 30 305
7ndr-assembly1.cif.gz_E crystal structure of tphc in an open conformation 0.8881 30 305
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.8736 27 309
ID Description Score Start End Superfamily
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9329 27 309 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9275 27 309 3.40.190.150
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.8969 27 310 3.40.190.150
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.8871 27 310 3.40.190.150
2f5xC01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.8676 27 309 3.40.190.150
ID Description Score Start End GO Terms
AF-A0A1G8FVB9-F1-model_v4 Tripartite-type tricarboxylate transporter, receptor component TctC 0.9281 8 309
AF-A0A484Y7V9-F1-model_v4 Tricarboxylate transport protein TctC 0.9255 15 309
AF-H0A2I4-F1-model_v4 Tat pathway signal sequence domain protein 0.924 24 309
AF-A0A1F4DWG0-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9239 18 309
AF-A0A157SPL6-F1-model_v4 Putattive exported protein 0.9238 18 309

Map