F414186

General Info

Members Datasets Scaffolds Average Seq Length
340 186 307 299

Family's Representative Sequence

Representative Sequence 3300003794|Ga0055531_10007072|Ga0055531_100070728
Length 355
Sequence MSRITRRKLVQFLLGAALSPGHQYWTAWSLHACPLLAHPCLFLSLAWLFSTRGPMINLMNDSMAELRSIVTRAGDRWTETGIPRVAMVHAEACASQVYQPMLHLVLQGSKTLSIGDQLRRYEAGTYFIVPVDIPATGQIFPGEGGQAYMATSLTLEPAIIASISGGAEAAPATWRAACFAPAQASSEMTDAWLRMMRLVDRPGDREVMAPLIEREMLFRALQGPLGGALREISQPDGRLFQIRRAIQWIRENFSKPFRVEPLAAMADMSVAAFYRHFRSVTAMTPIQYQKRLRLLRARWLLLFEPRDAASIAFEVGYESASQFSREYARLFGLPPSRDAARFRAGEYADPISPAA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917021 Novosphingobium sp. AP12 Isolate Rhizosphere
3 2510917030 Rhizobium sp. CF142 Isolate Rhizosphere
4 2513237093 Rhizobium leguminosarum bv. phaseoli FA23 Isolate Nodule
5 2515154113 Rhizobium ruizarguesonis Vc2 Isolate Nodule
6 2515154114 Rhizobium ruizarguesonis Vh3 Isolate Nodule
7 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
8 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
9 2582581298 Rhizobium alamii YR540 Isolate Rhizosphere
10 2585427529 Rhizobium alamii YR584 Isolate Rhizosphere
11 2599185303 Pseudomonas sp. NFACC42-2 Isolate Rhizoplane
12 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
13 2765235942 Rhizobium sp. WYCCWR10014 Isolate Nodule
14 2808606377 Pseudomonas sp. SJZ083 Isolate Rhizosphere
15 2808606381 Pseudomonas sp. SJZ077 Isolate Rhizosphere
16 2808606388 Pseudomonas sp. SJZ094 Isolate Rhizosphere
17 2808606445 Pseudomonas sp. SJZ131 Isolate Rhizosphere
18 2842110456 Rhizobium esperanzae SEMIA 414 Isolate Nodule
19 2842217011 Rhizobium leguminosarum SEMIA 475 Isolate Nodule
20 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
21 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
22 2919481497 Pseudomonas brassicacearum 3432 Isolate Unclassified
23 2933586486 Rhizobium leguminosarum SEMIA 4039 Isolate Nodule
24 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
25 2945961074 Pseudomonas sp. W2I6 Isolate Rhizosphere
26 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
27 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
28 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
29 3005445848 Rhizobium sp. WYJ-E13 Isolate Unclassified
30 3007619802 Pseudomonas sp. PB120 Isolate Unclassified
31 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
32 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
33 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
34 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
35 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
36 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
37 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
38 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
39 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
40 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
41 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
42 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
43 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
44 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
45 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
46 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
47 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
48 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
49 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
50 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
53 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
54 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
55 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
56 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
57 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
61 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
62 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
63 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
64 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
65 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
67 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
71 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
72 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
73 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
74 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
75 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
77 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
78 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
81 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
82 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
83 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
84 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
86 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
94 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
95 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
96 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
97 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
98 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
99 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
100 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
101 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
102 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
103 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
104 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
105 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
106 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
107 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
108 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
109 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
110 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
111 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
112 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
113 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
117 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
120 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
121 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
122 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
123 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
124 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
125 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
126 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
127 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
128 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
129 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
130 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
131 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
132 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
135 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
136 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
139 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
142 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
143 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
144 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
145 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
146 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
147 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
148 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
149 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
150 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
151 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
152 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
153 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
154 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
155 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
164 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
167 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
172 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
173 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
174 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
175 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
176 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
177 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
180 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
181 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
182 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
183 639633055 Rhizobium leguminosarum bv. viciae 3841 Isolate Unclassified
184 8005556819 Rhizobium sp. WYCCWR 11128 Isolate Nodule
185 8018163183 Rhizobium sp. WYCCWR 11146 Isolate Nodule
186 8057874678 Rhizobium acaciae 1AS12 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.29
Metatranscriptomes 0
Isolates 9.71

Biome Distribution

Category Percentage (%)
Aerial Root 0.29
Bulb 0
Endosphere 16.47
Nodule 3.53
Rhizoplane 2.35
Rhizosphere 61.47
Stem 0
Stem Tuber 0
Unclassified 15.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2588274 2162886007 Bacteria 1270
2 SwRhRL2b_contig_2778492 2162886007 Bacteria 1333
3 JGI25158J39367_1000359 3300002739 Bacteria 9859
4 JGI25163J39215_1000013 3300002771 Bacteria 86331
5 JGI25164J39214_1000071 3300002772 Bacteria 100905
6 JGI25152J39213_1001529 3300002773 Bacteria 9835
7 JGI25159J45721_1002886 3300002987 Bacteria 6282
8 JGI25153J46596_10028508 3300003215 Bacteria 1934
9 rootL2_10039748 3300003322 Bacteria 1211
10 rootH1_10030699 3300003323 Bacteria 4271
11 JGI25161J50226_1000103 3300003374 Bacteria 67942
12 Ga0055538_1000064 3300003751 Bacteria 100905
13 Ga0055539_1000098 3300003752 Bacteria 100905
14 Ga0055539_1000237 3300003752 Bacteria 37242
15 Ga0055533_1000108 3300003756 Bacteria 100905
16 Ga0055525_1000141 3300003759 Bacteria 100905
17 Ga0055535_1008092 3300003761 Bacteria 1932
18 Ga0055531_10007072 3300003794 Bacteria 6205
19 Ga0055541_1000065 3300003841 Bacteria 100905
20 Ga0055543_1000029 3300004625 Bacteria 131452
21 Ga0065704_10006337 3300005289 Bacteria 5048
22 Ga0070658_10112989 3300005327 Bacteria 2252
23 Ga0070665_100103925 3300005548 Bacteria 2843
24 Ga0070665_100306665 3300005548 Bacteria 1591
25 Ga0068855_100261463 3300005563 Bacteria 1928
26 Ga0075364_10064309 3300006051 Bacteria 2408
27 Ga0075369_10006356 3300006186 Bacteria 4464
28 Ga0105244_10020936 3300009036 Bacteria 3623
29 Ga0105244_10042820 3300009036 Bacteria 2338
30 Ga0105250_10000199 3300009092 Bacteria 51075
31 Ga0105247_10030485 3300009101 Bacteria 3269
32 Ga0105246_10000102 3300011119 Bacteria 37463
33 Ga0163162_10028938 3300013306 Bacteria 5483
34 Ga0182008_10023916 3300014497 Bacteria 3114
35 Ga0182008_10036664 3300014497 Bacteria 2453
36 Ga0182006_1000066 3300015261 Bacteria 151095
37 Ga0182006_1005689 3300015261 Bacteria 5896
38 Ga0182007_10003836 3300015262 Bacteria 6989
39 Ga0182005_1001642 3300015265 Bacteria 8697
40 Ga0182005_1002721 3300015265 Bacteria 6179
41 Ga0163161_10026920 3300017792 Bacteria 4077
42 Ga0213872_10018316 3300021361 Bacteria 3230
43 Ga0209760_100189 3300025207 Bacteria 30616
44 Ga0209436_100041 3300025208 Bacteria 74018
45 Ga0209784_100001 3300025224 Bacteria 3600592
46 Ga0209566_100001 3300025225 Bacteria 3600765
47 Ga0209674_100002 3300025226 Bacteria 3600592
48 Ga0209563_100002 3300025230 Bacteria 2045675
49 Ga0207427_100020 3300025231 Bacteria 507515
50 Ga0209437_100001 3300025233 Bacteria 2045675
51 Ga0209258_100675 3300025242 Bacteria 23925
52 Ga0207425_1003734 3300025245 Bacteria 4767
53 Ga0209677_100002 3300025253 Bacteria 2045675
54 Ga0209677_101781 3300025253 Bacteria 8900
55 Ga0209759_1005024 3300025256 Bacteria 4753
56 Ga0209129_1001406 3300025258 Bacteria 13465
57 Ga0209129_1004953 3300025258 Bacteria 4938
58 Ga0209129_1005715 3300025258 Bacteria 4281
59 Ga0209233_1000788 3300025261 Bacteria 14264
60 Ga0209673_1022744 3300025273 Bacteria 2153
61 Ga0209130_1000030 3300025284 Bacteria 323323
62 Ga0209025_1027875 3300025294 Bacteria 2785
63 Ga0209564_1010094 3300025295 Bacteria 4397
64 Ga0209758_1000561 3300025297 Bacteria 58483
65 Ga0209758_1014067 3300025297 Bacteria 4296
66 Ga0209758_1014120 3300025297 Bacteria 4281
67 Ga0209256_1012547 3300025299 Bacteria 3227
68 Ga0207426_1000047 3300025302 Bacteria 417011
69 Ga0209257_1002765 3300025304 Bacteria 16587
70 Ga0207696_1000090 3300025711 Bacteria 188474
71 Ga0207696_1000176 3300025711 Bacteria 100134
72 Ga0207696_1000177 3300025711 Bacteria 100134
73 Ga0207655_1023139 3300025728 Bacteria 3091
74 Ga0207705_10245582 3300025909 Bacteria 1364
75 Ga0207649_10062151 3300025920 Bacteria 2353
76 Ga0207681_10122938 3300025923 Bacteria 1906
77 Ga0268266_10238792 3300028379 Bacteria 1676
78 Ga0307405_10000197 3300031731 Bacteria 22213
79 Ga0307416_100024736 3300032002 Bacteria 4390
80 Ga0307414_10111201 3300032004 Bacteria 2086
81 Ga0395899_0273582 3300037312 Bacteria 1151
82 Ga0436361_0997343 3300039447 Bacteria 3231
83 Ga0439438_000299 3300041405 Bacteria 22223
84 Ga0439438_002861 3300041405 Bacteria 7186
85 Ga0439447_000016 3300041407 Bacteria 61120
86 Ga0439447_000204 3300041407 Bacteria 20828
87 Ga0439447_000518 3300041407 Bacteria 14295
88 Ga0439447_002371 3300041407 Bacteria 6885
89 Ga0439447_029506 3300041407 Bacteria 1388
90 Ga0439466_0000208 3300041411 Bacteria 23209
91 Ga0439466_0001752 3300041411 Bacteria 8490
92 Ga0439466_0010687 3300041411 Bacteria 3410
93 Ga0439466_0070767 3300041411 Bacteria 1111
94 Ga0439465_0004385 3300041413 Bacteria 4566
95 Ga0451835_0351917 3300041492 Bacteria 1517
96 Ga0451837_0922479 3300041494 Bacteria 1624
97 Ga0451847_0614506 3300041503 Bacteria 3019
98 Ga0439432_000231 3300042006 Bacteria 20105
99 Ga0439432_002172 3300042006 Bacteria 7400
100 Ga0439452_000253 3300042010 Bacteria 36669
101 Ga0439452_000674 3300042010 Bacteria 16810
102 Ga0439452_001090 3300042010 Bacteria 11964
103 Ga0450898_001209 3300042134 Bacteria 3336
104 Ga0450899_000972 3300042135 Bacteria 3256
105 Ga0450904_000480 3300042139 Bacteria 7829
106 Ga0450907_000003 3300042146 Bacteria 138102
107 Ga0439446_0025465 3300042156 Bacteria 1691
108 Ga0439440_0000298 3300042993 Bacteria 8106
109 Ga0495591_001528 3300046458 Bacteria 14219
110 Ga0495638_0003950 3300046460 Bacteria 11437
111 Ga0495638_0038352 3300046460 Bacteria 3045
112 Ga0495638_0258051 3300046460 Bacteria 958
113 Ga0495653_0019616 3300046463 Bacteria 5483
114 Ga0495650_0000026 3300046471 Bacteria 476029
115 Ga0495650_0000775 3300046471 Bacteria 39396
116 Ga0495650_0001184 3300046471 Bacteria 27715
117 Ga0495650_0059089 3300046471 Bacteria 1545
118 Ga0495605_0000001 3300046474 Bacteria 614538
119 Ga0495605_0000995 3300046474 Bacteria 19167
120 Ga0495605_0005581 3300046474 Bacteria 7316
121 Ga0495605_0009311 3300046474 Bacteria 5520
122 Ga0495605_0010856 3300046474 Bacteria 5087
123 Ga0495605_0014204 3300046474 Bacteria 4368
124 Ga0495605_0070142 3300046474 Bacteria 1658
125 Ga0495585_0000397 3300046492 Bacteria 42068
126 Ga0495585_0001727 3300046492 Bacteria 16645
127 Ga0495585_0002671 3300046492 Bacteria 12491
128 Ga0495585_0011595 3300046492 Bacteria 5212
129 Ga0495585_0018476 3300046492 Bacteria 4020
130 Ga0495607_0000082 3300046501 Bacteria 96822
131 Ga0495607_0001915 3300046501 Bacteria 17603
132 Ga0495607_0003128 3300046501 Bacteria 12849
133 Ga0495607_0011482 3300046501 Bacteria 5893
134 Ga0495607_0030474 3300046501 Bacteria 3312
135 Ga0495607_0088066 3300046501 Bacteria 1688
136 Ga0495607_0092906 3300046501 Bacteria 1631
137 Ga0495607_0106268 3300046501 Bacteria 1495
138 Ga0495607_0140791 3300046501 Bacteria 1244
139 Ga0495583_0000014 3300046506 Bacteria 320136
140 Ga0495583_0000109 3300046506 Bacteria 138768
141 Ga0495606_0000136 3300046507 Bacteria 125611
142 Ga0495606_0021738 3300046507 Bacteria 4693
143 Ga0495606_0197046 3300046507 Bacteria 1150
144 Ga0495610_0000003 3300046512 Bacteria 1203910
145 Ga0495610_0005614 3300046512 Bacteria 8854
146 Ga0495610_0011838 3300046512 Bacteria 5300
147 Ga0495610_0014560 3300046512 Bacteria 4615
148 Ga0495610_0018385 3300046512 Bacteria 3951
149 Ga0495610_0021129 3300046512 Bacteria 3586
150 Ga0495610_0060392 3300046512 Bacteria 1805
151 Ga0495616_0000003 3300046513 Bacteria 290178
152 Ga0495616_0030171 3300046513 Bacteria 2852
153 Ga0495616_0069694 3300046513 Bacteria 1704
154 Ga0495616_0129841 3300046513 Bacteria 1156
155 Ga0495620_0000010 3300046515 Bacteria 173604
156 Ga0495620_0000484 3300046515 Bacteria 25815
157 Ga0495620_0004225 3300046515 Bacteria 8130
158 Ga0495620_0021745 3300046515 Bacteria 3107
159 Ga0495620_0048515 3300046515 Bacteria 1822
160 Ga0495630_0004914 3300046517 Bacteria 9395
161 Ga0495631_0000059 3300046518 Bacteria 68349
162 Ga0495631_0006776 3300046518 Bacteria 5881
163 Ga0495631_0009732 3300046518 Bacteria 4790
164 Ga0495631_0075102 3300046518 Bacteria 1459
165 Ga0495632_0000051 3300046519 Bacteria 133522
166 Ga0495632_0001306 3300046519 Bacteria 21067
167 Ga0495632_0010539 3300046519 Bacteria 5461
168 Ga0495632_0027800 3300046519 Bacteria 2957
169 Ga0495632_0073521 3300046519 Bacteria 1639
170 Ga0495637_0000077 3300046520 Bacteria 78543
171 Ga0495637_0000098 3300046520 Bacteria 66534
172 Ga0495637_0005725 3300046520 Bacteria 6299
173 Ga0495637_0008222 3300046520 Bacteria 5131
174 Ga0495637_0019917 3300046520 Bacteria 3093
175 Ga0495643_0000019 3300046522 Bacteria 303627
176 Ga0495643_0028061 3300046522 Bacteria 3159
177 Ga0495648_0001842 3300046524 Bacteria 20345
178 Ga0495648_0004200 3300046524 Bacteria 12370
179 Ga0495648_0012291 3300046524 Bacteria 6394
180 Ga0495648_0030138 3300046524 Bacteria 3592
181 Ga0495648_0052511 3300046524 Bacteria 2475
182 Ga0495666_0007013 3300046526 Bacteria 5659
183 Ga0495654_0001437 3300046530 Bacteria 16377
184 Ga0495654_0004490 3300046530 Bacteria 8266
185 Ga0495654_0012356 3300046530 Bacteria 4588
186 Ga0495654_0151766 3300046530 Bacteria 1024
187 Ga0495587_0000190 3300046536 Bacteria 45240
188 Ga0495609_0000014 3300046538 Bacteria 326023
189 Ga0495609_0000188 3300046538 Bacteria 61830
190 Ga0495609_0001056 3300046538 Bacteria 19325
191 Ga0495597_0000061 3300046542 Bacteria 92012
192 Ga0495597_0012093 3300046542 Bacteria 4171
193 Ga0495633_0000009 3300046558 Bacteria 293183
194 Ga0495633_0015074 3300046558 Bacteria 4018
195 Ga0495633_0026735 3300046558 Bacteria 2828
196 Ga0495668_0004906 3300046616 Bacteria 9288
197 Ga0495634_0001714 3300046642 Bacteria 19026
198 Ga0495611_0000225 3300046648 Bacteria 39569
199 Ga0495611_0133056 3300046648 Bacteria 1160
200 Ga0495625_0000004 3300046660 Bacteria 611314
201 Ga0495625_0007385 3300046660 Bacteria 9576
202 Ga0495625_0010263 3300046660 Bacteria 7764
203 Ga0495625_0013406 3300046660 Bacteria 6588
204 Ga0495625_0048329 3300046660 Bacteria 3064
205 Ga0495625_0193329 3300046660 Bacteria 1347
206 Ga0495635_0000350 3300046663 Bacteria 29321
207 Ga0495661_0000029 3300046665 Bacteria 173899
208 Ga0495661_0000144 3300046665 Bacteria 82961
209 Ga0495661_0000447 3300046665 Bacteria 43687
210 Ga0495661_0003846 3300046665 Bacteria 10978
211 Ga0495661_0003921 3300046665 Bacteria 10865
212 Ga0495661_0015812 3300046665 Bacteria 5025
213 Ga0495646_0000790 3300046680 Bacteria 17703
214 Ga0495670_0004685 3300046691 Bacteria 6711
215 Ga0495670_0025648 3300046691 Bacteria 2916
216 Ga0495671_0003980 3300046692 Bacteria 8936
217 Ga0495671_0015953 3300046692 Bacteria 4020
218 Ga0495671_0068396 3300046692 Bacteria 1746
219 Ga0495671_0099243 3300046692 Bacteria 1424
220 Ga0495589_0000251 3300046794 Bacteria 43879
221 Ga0495660_0000052 3300046810 Bacteria 137821
222 Ga0495660_0000148 3300046810 Bacteria 76297
223 Ga0495660_0002640 3300046810 Bacteria 11375
224 Ga0495672_0020630 3300047320 Bacteria 4312
225 Ga0495672_0076718 3300047320 Bacteria 1876
226 Ga0495683_0001288 3300047323 Bacteria 16944
227 Ga0495683_0008847 3300047323 Bacteria 5371
228 Ga0495683_0009012 3300047323 Bacteria 5320
229 Ga0495679_000015 3300047446 Bacteria 287256
230 Ga0495679_002354 3300047446 Bacteria 9691
231 Ga0495673_0000008 3300047469 Bacteria 752462
232 Ga0495673_0000036 3300047469 Bacteria 311035
233 Ga0495673_0000112 3300047469 Bacteria 164434
234 Ga0495673_0001796 3300047469 Bacteria 16266
235 Ga0495673_0002993 3300047469 Bacteria 11385
236 Ga0495673_0003465 3300047469 Bacteria 10383
237 Ga0495673_0009795 3300047469 Bacteria 5267
238 Ga0495673_0017452 3300047469 Bacteria 3643
239 Ga0495681_0123961 3300047470 Bacteria 1106
240 Ga0495681_0124599 3300047470 Bacteria 1102
241 Ga0495686_0004075 3300047472 Bacteria 12202
242 Ga0495686_0009507 3300047472 Bacteria 6994
243 Ga0495593_0009302 3300047673 Bacteria 5702
244 Ga0495626_0000012 3300048091 Bacteria 258483
245 Ga0496102_0000821 3300048905 Bacteria 30135
246 Ga0496102_0219761 3300048905 Bacteria 1791
247 Ga0496103_0001316 3300048906 Bacteria 16847
248 Ga0496106_0001032 3300048909 Bacteria 20508
249 Ga0496106_0040547 3300048909 Bacteria 3488
250 Ga0496110_0013543 3300048913 Bacteria 6748
251 Ga0496116_0011895 3300048919 Bacteria 7159
252 Ga0496116_0071307 3300048919 Bacteria 2200
253 Ga0496117_0058785 3300048920 Bacteria 2661
254 Ga0496118_0003083 3300048921 Bacteria 21369
255 Ga0496118_0010613 3300048921 Bacteria 9096
256 Ga0496118_0011095 3300048921 Bacteria 8843
257 Ga0496118_0040009 3300048921 Bacteria 3733
258 Ga0496119_0015131 3300048922 Bacteria 5971
259 Ga0496119_0026519 3300048922 Bacteria 4015
260 Ga0496120_0001430 3300048923 Bacteria 28786
261 Ga0496120_0010053 3300048923 Bacteria 6642
262 Ga0496120_0100351 3300048923 Bacteria 1531
263 Ga0496121_0000782 3300048924 Bacteria 58365
264 Ga0496121_0009348 3300048924 Bacteria 11295
265 Ga0496121_0024059 3300048924 Bacteria 5836
266 Ga0496121_0066783 3300048924 Bacteria 2918
267 Ga0496121_0068862 3300048924 Bacteria 2860
268 Ga0496121_0070565 3300048924 Bacteria 2813
269 Ga0496121_0268466 3300048924 Bacteria 1174
270 Ga0496122_0000112 3300048925 Bacteria 187099
271 Ga0496122_0048366 3300048925 Bacteria 3271
272 Ga0496122_0191361 3300048925 Bacteria 1207
273 Ga0496123_0000190 3300048926 Bacteria 124705
274 Ga0496123_0011841 3300048926 Bacteria 7505
275 Ga0496123_0049965 3300048926 Bacteria 2798
276 Ga0496124_0000024 3300048927 Bacteria 414291
277 Ga0496124_0000047 3300048927 Bacteria 285554
278 Ga0496124_0000318 3300048927 Bacteria 89004
279 Ga0496124_0001319 3300048927 Bacteria 37386
280 Ga0496124_0004698 3300048927 Bacteria 15771
281 Ga0496124_0016430 3300048927 Bacteria 7036
282 Ga0496124_0024406 3300048927 Bacteria 5497
283 Ga0496124_0080971 3300048927 Bacteria 2670
284 Ga0496125_0001337 3300048928 Bacteria 36347
285 Ga0496125_0019049 3300048928 Bacteria 6493
286 Ga0496125_0040096 3300048928 Bacteria 4021
287 Ga0496125_0050506 3300048928 Bacteria 3442
288 Ga0496126_0021421 3300048929 Bacteria 6314
289 Ga0496126_0064214 3300048929 Bacteria 3289
290 Ga0496126_0095055 3300048929 Bacteria 2615
291 Ga0496126_0128725 3300048929 Bacteria 2189
292 Ga0495678_000011 3300049459 Bacteria 335512
293 Ga0495678_000052 3300049459 Bacteria 157731
294 Ga0495682_0000001 3300049460 Bacteria 1559116
295 Ga0495682_0012508 3300049460 Bacteria 3252
296 nmdc:mga00v17_30483_c2 3300050491 Bacteria 2614
297 nmdc:mga0sz30_23800_c1 3300050516 Bacteria 2495
298 Ga0500644_0000010 3300053088 Bacteria 127225
299 Ga0500556_0006529 3300053104 Bacteria 3314
300 Ga0500618_001069 3300053125 Bacteria 13519
301 Ga0500559_0005173 3300053136 Bacteria 6024
302 Ga0500568_0006649 3300053139 Bacteria 5781
303 Ga0500573_0018821 3300053140 Bacteria 3944
304 Ga0500573_0023637 3300053140 Bacteria 3530
305 Ga0500577_0000366 3300053142 Bacteria 11571
306 Ga0500633_0002801 3300053160 Bacteria 3671
307 Ga0500633_0009339 3300053160 Bacteria 2574

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300046501 Ga0495607_0106268 Ga0495607_0106268_767_1477 233
2 3300046513 Ga0495616_0129841 Ga0495616_0129841_40_783 244
3 3300046460 Ga0495638_0258051 Ga0495638_0258051_100_894 258
4 3300046648 Ga0495611_0133056 Ga0495611_0133056_300_1094 258
5 3300021361 Ga0213872_10018316 Ga0213872_100183161 263
6 3300005327 Ga0070658_10112989 Ga0070658_101129892 271
7 3300025253 Ga0209677_101781 Ga0209677_1017813 271
8 3300025909 Ga0207705_10245582 Ga0207705_102455822 271
9 3300003323 rootH1_10030699 rootH1_100306992 275
10 3300003761 Ga0055535_1008092 Ga0055535_10080922 275
11 3300025242 Ga0209258_100675 Ga0209258_1006753 275
12 3300025256 Ga0209759_1005024 Ga0209759_10050243 275
13 3300041492 Ga0451835_0351917 Ga0451835_0351917_146_1057 275
14 3300041494 Ga0451837_0922479 Ga0451837_0922479_225_1136 275
15 3300046492 Ga0495585_0018476 Ga0495585_0018476_190_1101 275
16 3300046518 Ga0495631_0075102 Ga0495631_0075102_106_1017 275
17 3300046558 Ga0495633_0015074 Ga0495633_0015074_1133_2044 275
18 3300046660 Ga0495625_0048329 Ga0495625_0048329_1708_2619 275
19 3300047470 Ga0495681_0123961 Ga0495681_0123961_39_950 275
20 3300053088 Ga0500644_0000010 Ga0500644_0000010_17734_18633 277
21 3300041503 Ga0451847_0614506 Ga0451847_0614506_535_1446 278
22 3300048909 Ga0496106_0040547 Ga0496106_0040547_208_1074 278
23 iso_pu_bacteria 2599185307 2599973290 278
24 iso_pu_bacteria 2510917030 2511195957 279
25 iso_pu_bacteria 2582581298 2585224707 279
26 iso_pu_bacteria 2585427529 2585547263 279
27 3300046460 Ga0495638_0038352 Ga0495638_0038352_150_1034 281
28 3300046501 Ga0495607_0088066 Ga0495607_0088066_656_1540 281
29 3300047469 Ga0495673_0001796 Ga0495673_0001796_7905_8804 281
30 iso_pu_bacteria 2939669807 2939671542 281
31 3300009036 Ga0105244_10042820 Ga0105244_100428203 282
32 3300032002 Ga0307416_100024736 Ga0307416_1000247363 282
33 3300046471 Ga0495650_0059089 Ga0495650_0059089_85_1008 282
34 3300046474 Ga0495605_0005581 Ga0495605_0005581_5168_6034 282
35 3300046492 Ga0495585_0001727 Ga0495585_0001727_1427_2350 282
36 3300046530 Ga0495654_0004490 Ga0495654_0004490_2828_3751 282
37 3300046665 Ga0495661_0003846 Ga0495661_0003846_8447_9370 282
38 3300046692 Ga0495671_0015953 Ga0495671_0015953_2453_3340 282
39 3300046692 Ga0495671_0068396 Ga0495671_0068396_629_1501 282
40 3300047323 Ga0495683_0008847 Ga0495683_0008847_1443_2366 282
41 3300048922 Ga0496119_0026519 Ga0496119_0026519_3015_3872 282
42 3300048927 Ga0496124_0080971 Ga0496124_0080971_1670_2527 282
43 3300048928 Ga0496125_0019049 Ga0496125_0019049_2566_3423 282
44 iso_pu_bacteria 2510917021 2511126910 282
45 iso_pu_bacteria 2513237093 2513631247 282
46 iso_pu_bacteria 2515154113 2515637176 282
47 iso_pu_bacteria 2515154114 2515642956 282
48 iso_pu_bacteria 2516653077 2517037629 282
49 iso_pu_bacteria 2517287029 2517410427 282
50 iso_pu_bacteria 2765235942 2766065251 282
51 iso_pu_bacteria 2842110456 2842113363 282
52 iso_pu_bacteria 2842217011 2842220005 282
53 iso_pu_bacteria 2857516855 2857518831 282
54 iso_pu_bacteria 2919100787 2919104641 282
55 iso_pu_bacteria 2919481497 2919483720 282
56 iso_pu_bacteria 2933586486 2933589347 282
57 iso_pu_bacteria 3005445848 3005449350 282
58 iso_pu_bacteria 3007619802 3007622884 282
59 iso_pu_bacteria 639633055 639650066 282
60 iso_pu_bacteria 8005556819 8005559095 282
61 iso_pu_bacteria 8018163183 8018170289 282
62 iso_pu_bacteria 8057874678 8057877061 282
63 3300048929 Ga0496126_0095055 Ga0496126_0095055_1628_2521 284
64 3300041407 Ga0439447_000016 Ga0439447_000016_59537_60424 285
65 3300046522 Ga0495643_0000019 Ga0495643_0000019_247578_248474 285
66 3300046524 Ga0495648_0030138 Ga0495648_0030138_2552_3448 285
67 3300046558 Ga0495633_0026735 Ga0495633_0026735_591_1487 285
68 3300047469 Ga0495673_0000008 Ga0495673_0000008_69313_70194 285
69 3300047469 Ga0495673_0000112 Ga0495673_0000112_122354_123226 285
70 3300048921 Ga0496118_0010613 Ga0496118_0010613_3497_4393 285
71 3300048923 Ga0496120_0100351 Ga0496120_0100351_376_1269 285
72 3300048925 Ga0496122_0000112 Ga0496122_0000112_50259_51155 285
73 3300048926 Ga0496123_0000190 Ga0496123_0000190_28135_29031 285
74 3300048927 Ga0496124_0000318 Ga0496124_0000318_74636_75529 285
75 iso_pu_bacteria 2808606445 2809214396 285
76 3300002739 JGI25158J39367_1000359 JGI25158J39367_10003597 286
77 3300002773 JGI25152J39213_1001529 JGI25152J39213_10015299 286
78 3300002987 JGI25159J45721_1002886 JGI25159J45721_10028862 286
79 3300003215 JGI25153J46596_10028508 JGI25153J46596_100285082 286
80 3300003322 rootL2_10039748 rootL2_100397481 286
81 3300003374 JGI25161J50226_1000103 JGI25161J50226_100010334 286
82 3300004625 Ga0055543_1000029 Ga0055543_100002937 286
83 3300005289 Ga0065704_10006337 Ga0065704_100063373 286
84 3300005548 Ga0070665_100306665 Ga0070665_1003066652 286
85 3300005563 Ga0068855_100261463 Ga0068855_1002614632 286
86 3300006186 Ga0075369_10006356 Ga0075369_100063564 286
87 3300009101 Ga0105247_10030485 Ga0105247_100304853 286
88 3300011119 Ga0105246_10000102 Ga0105246_1000010218 286
89 3300014497 Ga0182008_10023916 Ga0182008_100239163 286
90 3300015261 Ga0182006_1000066 Ga0182006_100006652 286
91 3300015261 Ga0182006_1005689 Ga0182006_10056894 286
92 3300015262 Ga0182007_10003836 Ga0182007_100038365 286
93 3300015265 Ga0182005_1001642 Ga0182005_10016426 286
94 3300015265 Ga0182005_1002721 Ga0182005_10027215 286
95 3300025207 Ga0209760_100189 Ga0209760_1001899 286
96 3300025208 Ga0209436_100041 Ga0209436_10004170 286
97 3300025224 Ga0209784_100001 Ga0209784_1000011825 286
98 3300025225 Ga0209566_100001 Ga0209566_1000011825 286
99 3300025226 Ga0209674_100002 Ga0209674_1000021825 286
100 3300025230 Ga0209563_100002 Ga0209563_100002360 286
101 3300025231 Ga0207427_100020 Ga0207427_100020417 286
102 3300025233 Ga0209437_100001 Ga0209437_100001360 286
103 3300025245 Ga0207425_1003734 Ga0207425_10037344 286
104 3300025253 Ga0209677_100002 Ga0209677_100002360 286
105 3300025258 Ga0209129_1001406 Ga0209129_10014063 286
106 3300025258 Ga0209129_1004953 Ga0209129_10049534 286
107 3300025258 Ga0209129_1005715 Ga0209129_10057153 286
108 3300025261 Ga0209233_1000788 Ga0209233_10007882 286
109 3300025284 Ga0209130_1000030 Ga0209130_100003089 286
110 3300025294 Ga0209025_1027875 Ga0209025_10278752 286
111 3300025297 Ga0209758_1000561 Ga0209758_100056131 286
112 3300025297 Ga0209758_1014067 Ga0209758_10140673 286
113 3300025297 Ga0209758_1014120 Ga0209758_10141203 286
114 3300025302 Ga0207426_1000047 Ga0207426_1000047311 286
115 3300025728 Ga0207655_1023139 Ga0207655_10231392 286
116 3300025920 Ga0207649_10062151 Ga0207649_100621513 286
117 3300025923 Ga0207681_10122938 Ga0207681_101229381 286
118 3300028379 Ga0268266_10238792 Ga0268266_102387922 286
119 3300041405 Ga0439438_000299 Ga0439438_000299_15744_16637 286
120 3300041405 Ga0439438_002861 Ga0439438_002861_355_1248 286
121 3300041407 Ga0439447_000204 Ga0439447_000204_19047_19940 286
122 3300041407 Ga0439447_000518 Ga0439447_000518_9824_10717 286
123 3300041411 Ga0439466_0000208 Ga0439466_0000208_15724_16617 286
124 3300041411 Ga0439466_0001752 Ga0439466_0001752_6436_7329 286
125 3300042010 Ga0439452_000253 Ga0439452_000253_15759_16652 286
126 3300042010 Ga0439452_000674 Ga0439452_000674_11449_12327 286
127 3300042010 Ga0439452_001090 Ga0439452_001090_4590_5483 286
128 3300042156 Ga0439446_0025465 Ga0439446_0025465_658_1551 286
129 3300042993 Ga0439440_0000298 Ga0439440_0000298_421_1308 286
130 3300046458 Ga0495591_001528 Ga0495591_001528_3627_4538 286
131 3300046460 Ga0495638_0003950 Ga0495638_0003950_7152_8054 286
132 3300046471 Ga0495650_0000775 Ga0495650_0000775_7169_8050 286
133 3300046471 Ga0495650_0001184 Ga0495650_0001184_4892_5788 286
134 3300046474 Ga0495605_0000001 Ga0495605_0000001_158092_158982 286
135 3300046474 Ga0495605_0000995 Ga0495605_0000995_7435_8340 286
136 3300046474 Ga0495605_0009311 Ga0495605_0009311_1257_2135 286
137 3300046474 Ga0495605_0014204 Ga0495605_0014204_2088_3002 286
138 3300046474 Ga0495605_0070142 Ga0495605_0070142_454_1356 286
139 3300046492 Ga0495585_0000397 Ga0495585_0000397_37670_38560 286
140 3300046492 Ga0495585_0002671 Ga0495585_0002671_10122_11018 286
141 3300046492 Ga0495585_0011595 Ga0495585_0011595_2620_3498 286
142 3300046501 Ga0495607_0001915 Ga0495607_0001915_8433_9320 286
143 3300046501 Ga0495607_0011482 Ga0495607_0011482_3100_3969 286
144 3300046501 Ga0495607_0030474 Ga0495607_0030474_546_1439 286
145 3300046501 Ga0495607_0092906 Ga0495607_0092906_493_1404 286
146 3300046501 Ga0495607_0140791 Ga0495607_0140791_110_988 286
147 3300046506 Ga0495583_0000014 Ga0495583_0000014_302139_303017 286
148 3300046506 Ga0495583_0000109 Ga0495583_0000109_67546_68442 286
149 3300046507 Ga0495606_0000136 Ga0495606_0000136_112057_112953 286
150 3300046507 Ga0495606_0021738 Ga0495606_0021738_543_1421 286
151 3300046507 Ga0495606_0197046 Ga0495606_0197046_142_1071 286
152 3300046512 Ga0495610_0000003 Ga0495610_0000003_705954_706838 286
153 3300046512 Ga0495610_0005614 Ga0495610_0005614_2821_3717 286
154 3300046512 Ga0495610_0011838 Ga0495610_0011838_1038_1904 286
155 3300046512 Ga0495610_0014560 Ga0495610_0014560_282_1178 286
156 3300046512 Ga0495610_0021129 Ga0495610_0021129_891_1769 286
157 3300046512 Ga0495610_0060392 Ga0495610_0060392_141_1052 286
158 3300046513 Ga0495616_0000003 Ga0495616_0000003_66759_67655 286
159 3300046513 Ga0495616_0030171 Ga0495616_0030171_1269_2147 286
160 3300046513 Ga0495616_0069694 Ga0495616_0069694_239_1126 286
161 3300046515 Ga0495620_0000484 Ga0495620_0000484_10497_11375 286
162 3300046515 Ga0495620_0021745 Ga0495620_0021745_1970_2848 286
163 3300046515 Ga0495620_0048515 Ga0495620_0048515_839_1750 286
164 3300046518 Ga0495631_0000059 Ga0495631_0000059_2268_3164 286
165 3300046518 Ga0495631_0006776 Ga0495631_0006776_3405_4271 286
166 3300046518 Ga0495631_0009732 Ga0495631_0009732_315_1193 286
167 3300046519 Ga0495632_0000051 Ga0495632_0000051_36989_37885 286
168 3300046519 Ga0495632_0001306 Ga0495632_0001306_14154_15026 286
169 3300046519 Ga0495632_0010539 Ga0495632_0010539_1345_2223 286
170 3300046519 Ga0495632_0027800 Ga0495632_0027800_148_1044 286
171 3300046519 Ga0495632_0073521 Ga0495632_0073521_413_1324 286
172 3300046520 Ga0495637_0000077 Ga0495637_0000077_74510_75388 286
173 3300046520 Ga0495637_0005725 Ga0495637_0005725_3013_3918 286
174 3300046520 Ga0495637_0008222 Ga0495637_0008222_4094_4990 286
175 3300046520 Ga0495637_0019917 Ga0495637_0019917_782_1666 286
176 3300046522 Ga0495643_0028061 Ga0495643_0028061_1318_2196 286
177 3300046524 Ga0495648_0001842 Ga0495648_0001842_6093_6974 286
178 3300046524 Ga0495648_0004200 Ga0495648_0004200_585_1496 286
179 3300046524 Ga0495648_0012291 Ga0495648_0012291_2637_3515 286
180 3300046530 Ga0495654_0001437 Ga0495654_0001437_12094_12972 286
181 3300046530 Ga0495654_0012356 Ga0495654_0012356_271_1137 286
182 3300046530 Ga0495654_0151766 Ga0495654_0151766_10_882 286
183 3300046538 Ga0495609_0000014 Ga0495609_0000014_63473_64366 286
184 3300046538 Ga0495609_0000188 Ga0495609_0000188_3405_4283 286
185 3300046538 Ga0495609_0001056 Ga0495609_0001056_17120_17998 286
186 3300046542 Ga0495597_0000061 Ga0495597_0000061_8199_9104 286
187 3300046616 Ga0495668_0004906 Ga0495668_0004906_845_1723 286
188 3300046648 Ga0495611_0000225 Ga0495611_0000225_5048_5944 286
189 3300046660 Ga0495625_0000004 Ga0495625_0000004_487276_488154 286
190 3300046660 Ga0495625_0007385 Ga0495625_0007385_2344_3240 286
191 3300046660 Ga0495625_0013406 Ga0495625_0013406_2263_3165 286
192 3300046660 Ga0495625_0193329 Ga0495625_0193329_36_914 286
193 3300046665 Ga0495661_0000144 Ga0495661_0000144_23117_24013 286
194 3300046665 Ga0495661_0003921 Ga0495661_0003921_3718_4599 286
195 3300046665 Ga0495661_0015812 Ga0495661_0015812_2229_3107 286
196 3300046691 Ga0495670_0025648 Ga0495670_0025648_1243_2139 286
197 3300046810 Ga0495660_0000052 Ga0495660_0000052_70914_71843 286
198 3300046810 Ga0495660_0000148 Ga0495660_0000148_47995_48906 286
199 3300046810 Ga0495660_0002640 Ga0495660_0002640_7343_8221 286
200 3300047320 Ga0495672_0020630 Ga0495672_0020630_1215_2093 286
201 3300047320 Ga0495672_0076718 Ga0495672_0076718_195_1100 286
202 3300047323 Ga0495683_0001288 Ga0495683_0001288_7049_7945 286
203 3300047446 Ga0495679_000015 Ga0495679_000015_108648_109526 286
204 3300047446 Ga0495679_002354 Ga0495679_002354_3939_4805 286
205 3300047469 Ga0495673_0000036 Ga0495673_0000036_118182_119111 286
206 3300047469 Ga0495673_0009795 Ga0495673_0009795_1921_2799 286
207 3300047469 Ga0495673_0017452 Ga0495673_0017452_1884_2780 286
208 3300047470 Ga0495681_0124599 Ga0495681_0124599_137_1015 286
209 3300047472 Ga0495686_0004075 Ga0495686_0004075_8432_9328 286
210 3300047472 Ga0495686_0009507 Ga0495686_0009507_5036_5914 286
211 3300048091 Ga0495626_0000012 Ga0495626_0000012_250938_251816 286
212 3300048905 Ga0496102_0219761 Ga0496102_0219761_347_1225 286
213 3300048909 Ga0496106_0001032 Ga0496106_0001032_4787_5680 286
214 3300048913 Ga0496110_0013543 Ga0496110_0013543_5802_6680 286
215 3300048924 Ga0496121_0000782 Ga0496121_0000782_38362_39291 286
216 3300048924 Ga0496121_0009348 Ga0496121_0009348_5519_6415 286
217 3300048924 Ga0496121_0268466 Ga0496121_0268466_174_1088 286
218 3300048925 Ga0496122_0191361 Ga0496122_0191361_113_1015 286
219 3300048927 Ga0496124_0000024 Ga0496124_0000024_27889_28791 286
220 3300048927 Ga0496124_0000047 Ga0496124_0000047_90910_91815 286
221 3300048927 Ga0496124_0016430 Ga0496124_0016430_897_1775 286
222 3300048929 Ga0496126_0064214 Ga0496126_0064214_2173_3057 286
223 3300049459 Ga0495678_000052 Ga0495678_000052_108996_109874 286
224 3300049460 Ga0495682_0012508 Ga0495682_0012508_2144_3022 286
225 3300053136 Ga0500559_0005173 Ga0500559_0005173_4572_5468 286
226 3300053140 Ga0500573_0018821 Ga0500573_0018821_1476_2390 286
227 3300053140 Ga0500573_0023637 Ga0500573_0023637_2156_3070 286
228 3300053142 Ga0500577_0000366 Ga0500577_0000366_4606_5526 286
229 3300053160 Ga0500633_0002801 Ga0500633_0002801_1648_2544 286
230 iso_pu_bacteria 2599185303 2599949755 286
231 iso_pu_bacteria 2808606388 2808996039 286
232 iso_pu_bacteria 2945961074 2945964361 286
233 3300009036 Ga0105244_10020936 Ga0105244_100209364 288
234 3300046665 Ga0495661_0000447 Ga0495661_0000447_39449_40354 288
235 iso_pu_bacteria 2808606377 2808930196 288
236 iso_pu_bacteria 2808606381 2808952239 288
237 3300002771 JGI25163J39215_1000013 JGI25163J39215_10000138 289
238 3300002772 JGI25164J39214_1000071 JGI25164J39214_100007126 289
239 3300003751 Ga0055538_1000064 Ga0055538_100006426 289
240 3300003752 Ga0055539_1000098 Ga0055539_100009826 289
241 3300003756 Ga0055533_1000108 Ga0055533_100010826 289
242 3300003759 Ga0055525_1000141 Ga0055525_100014126 289
243 3300003841 Ga0055541_1000065 Ga0055541_100006565 289
244 3300039447 Ga0436361_0997343 Ga0436361_0997343_64_1008 289
245 3300041411 Ga0439466_0010687 Ga0439466_0010687_73_996 289
246 3300042139 Ga0450904_000480 Ga0450904_000480_3303_4172 289
247 3300046524 Ga0495648_0052511 Ga0495648_0052511_367_1326 289
248 3300053139 Ga0500568_0006649 Ga0500568_0006649_2850_3770 289
249 3300053160 Ga0500633_0009339 Ga0500633_0009339_323_1243 289
250 2162886007 SwRhRL2b_contig_2588274 SwRhRL2b_0785.00004910 290
251 2162886007 SwRhRL2b_contig_2778492 SwRhRL2b_0875.00007140 290
252 3300003752 Ga0055539_1000237 Ga0055539_10002373 290
253 3300003794 Ga0055531_10007072 Ga0055531_100070728 290
254 3300005548 Ga0070665_100103925 Ga0070665_1001039254 290
255 3300006051 Ga0075364_10064309 Ga0075364_100643093 290
256 3300009092 Ga0105250_10000199 Ga0105250_1000019915 290
257 3300013306 Ga0163162_10028938 Ga0163162_100289386 290
258 3300014497 Ga0182008_10036664 Ga0182008_100366643 290
259 3300017792 Ga0163161_10026920 Ga0163161_100269204 290
260 3300025273 Ga0209673_1022744 Ga0209673_10227443 290
261 3300025295 Ga0209564_1010094 Ga0209564_10100942 290
262 3300025299 Ga0209256_1012547 Ga0209256_10125473 290
263 3300025304 Ga0209257_1002765 Ga0209257_100276510 290
264 3300025711 Ga0207696_1000090 Ga0207696_1000090127 290
265 3300025711 Ga0207696_1000176 Ga0207696_100017615 290
266 3300025711 Ga0207696_1000177 Ga0207696_100017794 290
267 3300031731 Ga0307405_10000197 Ga0307405_1000019718 290
268 3300032004 Ga0307414_10111201 Ga0307414_101112012 290
269 3300037312 Ga0395899_0273582 Ga0395899_0273582_76_1026 290
270 3300041407 Ga0439447_002371 Ga0439447_002371_3441_4451 290
271 3300041407 Ga0439447_029506 Ga0439447_029506_307_1254 290
272 3300041411 Ga0439466_0070767 Ga0439466_0070767_22_927 290
273 3300041413 Ga0439465_0004385 Ga0439465_0004385_1926_2993 290
274 3300042006 Ga0439432_000231 Ga0439432_000231_15856_16761 290
275 3300042006 Ga0439432_002172 Ga0439432_002172_4469_5479 290
276 3300042134 Ga0450898_001209 Ga0450898_001209_1859_2731 290
277 3300042135 Ga0450899_000972 Ga0450899_000972_1350_2222 290
278 3300042146 Ga0450907_000003 Ga0450907_000003_13966_14976 290
279 3300046463 Ga0495653_0019616 Ga0495653_0019616_3499_4392 290
280 3300046471 Ga0495650_0000026 Ga0495650_0000026_45635_46552 290
281 3300046474 Ga0495605_0010856 Ga0495605_0010856_3003_3932 290
282 3300046501 Ga0495607_0000082 Ga0495607_0000082_92198_93115 290
283 3300046501 Ga0495607_0003128 Ga0495607_0003128_10673_11554 290
284 3300046512 Ga0495610_0018385 Ga0495610_0018385_2972_3931 290
285 3300046515 Ga0495620_0000010 Ga0495620_0000010_36200_37210 290
286 3300046515 Ga0495620_0004225 Ga0495620_0004225_38_916 290
287 3300046517 Ga0495630_0004914 Ga0495630_0004914_2289_3182 290
288 3300046520 Ga0495637_0000098 Ga0495637_0000098_30555_31502 290
289 3300046526 Ga0495666_0007013 Ga0495666_0007013_3621_4514 290
290 3300046536 Ga0495587_0000190 Ga0495587_0000190_13878_14771 290
291 3300046542 Ga0495597_0012093 Ga0495597_0012093_2466_3476 290
292 3300046558 Ga0495633_0000009 Ga0495633_0000009_113923_114933 290
293 3300046642 Ga0495634_0001714 Ga0495634_0001714_8430_9323 290
294 3300046660 Ga0495625_0010263 Ga0495625_0010263_3902_4861 290
295 3300046663 Ga0495635_0000350 Ga0495635_0000350_15449_16342 290
296 3300046665 Ga0495661_0000029 Ga0495661_0000029_165872_166882 290
297 3300046680 Ga0495646_0000790 Ga0495646_0000790_8472_9365 290
298 3300046691 Ga0495670_0004685 Ga0495670_0004685_2761_3771 290
299 3300046692 Ga0495671_0003980 Ga0495671_0003980_6524_7534 290
300 3300046692 Ga0495671_0099243 Ga0495671_0099243_345_1292 290
301 3300046794 Ga0495589_0000251 Ga0495589_0000251_22328_23338 290
302 3300047323 Ga0495683_0009012 Ga0495683_0009012_446_1363 290
303 3300047469 Ga0495673_0002993 Ga0495673_0002993_3735_4745 290
304 3300047469 Ga0495673_0003465 Ga0495673_0003465_744_1691 290
305 3300047673 Ga0495593_0009302 Ga0495593_0009302_1295_2188 290
306 3300048905 Ga0496102_0000821 Ga0496102_0000821_15494_16387 290
307 3300048906 Ga0496103_0001316 Ga0496103_0001316_15576_16469 290
308 3300048919 Ga0496116_0011895 Ga0496116_0011895_3277_4170 290
309 3300048919 Ga0496116_0071307 Ga0496116_0071307_1150_2055 290
310 3300048920 Ga0496117_0058785 Ga0496117_0058785_672_1544 290
311 3300048921 Ga0496118_0003083 Ga0496118_0003083_13590_14483 290
312 3300048921 Ga0496118_0011095 Ga0496118_0011095_3591_4463 290
313 3300048921 Ga0496118_0040009 Ga0496118_0040009_1231_2298 290
314 3300048922 Ga0496119_0015131 Ga0496119_0015131_424_1305 290
315 3300048923 Ga0496120_0001430 Ga0496120_0001430_4692_5573 290
316 3300048923 Ga0496120_0010053 Ga0496120_0010053_2423_3295 290
317 3300048924 Ga0496121_0024059 Ga0496121_0024059_1433_2305 290
318 3300048924 Ga0496121_0066783 Ga0496121_0066783_953_1846 290
319 3300048924 Ga0496121_0068862 Ga0496121_0068862_1328_2395 290
320 3300048924 Ga0496121_0070565 Ga0496121_0070565_459_1364 290
321 3300048925 Ga0496122_0048366 Ga0496122_0048366_1336_2208 290
322 3300048926 Ga0496123_0011841 Ga0496123_0011841_1455_2360 290
323 3300048926 Ga0496123_0049965 Ga0496123_0049965_672_1544 290
324 3300048927 Ga0496124_0001319 Ga0496124_0001319_31567_32448 290
325 3300048927 Ga0496124_0004698 Ga0496124_0004698_7310_8215 290
326 3300048927 Ga0496124_0024406 Ga0496124_0024406_1075_1947 290
327 3300048928 Ga0496125_0001337 Ga0496125_0001337_4710_5591 290
328 3300048928 Ga0496125_0040096 Ga0496125_0040096_1335_2207 290
329 3300048928 Ga0496125_0050506 Ga0496125_0050506_1044_1949 290
330 3300048929 Ga0496126_0021421 Ga0496126_0021421_1986_2867 290
331 3300048929 Ga0496126_0128725 Ga0496126_0128725_1082_1975 290
332 3300049459 Ga0495678_000011 Ga0495678_000011_102163_103173 290
333 3300049460 Ga0495682_0000001 Ga0495682_0000001_1015201_1016109 290
334 3300050491 nmdc:mga00v17_30483_c2 nmdc:mga00v17_30483_c2_576_1481 290
335 3300050516 nmdc:mga0sz30_23800_c1 nmdc:mga0sz30_23800_c1_504_1571 290
336 3300053104 Ga0500556_0006529 Ga0500556_0006529_1723_2715 290
337 3300053125 Ga0500618_001069 Ga0500618_001069_5267_6289 290
338 iso_pu_bacteria 2974307012 2974310539 290
339 iso_pu_bacteria 2977247770 2977251277 290
340 iso_pu_bacteria 2984514374 2984518087 290

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12833

HTH_18

Helix-turn-helix domain

262

341

0.97

PF06719

AraC_N

AraC-type transcriptional regulator N-terminus

81

228

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1u8b-assembly1.cif.gz_A crystal structure of the methylated n-ada/dna complex 0.9229 184 239
3oio-assembly1.cif.gz_A crystal structure of transcriptional regulator (arac-type dna-binding domain-containing proteins) from chromobacterium violaceum 0.9165 186 287
6swi-assembly1.cif.gz_A the c-terminal domain of arat, a response regulator from geobacillus stearothermophilus 0.9142 187 287
3w6v-assembly1.cif.gz_A crystal structure of the dna-binding domain of adpa, the global transcriptional factor, in complex with a target dna 0.9121 187 289
3lsg-assembly1.cif.gz_A the crystal structure of the c-terminal domain of the two-component response regulator yesn from fusobacterium nucleatum subsp. nucleatum atcc 25586 0.8949 191 285
ID Description Score Start End Superfamily
af_P32677_219_275_1.10.10.60 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.974 237 289 1.10.10.60
3lsgA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9682 243 285 1.10.10.60
1d5yD02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.968 239 286 1.10.10.60
3lsgB02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9399 242 285 1.10.10.60
3lsgC02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9381 243 285 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A6B1J1Y4-F1-model_v4 deleted 0.9726 186 281
AF-A0A656K2C5-F1-model_v4 AraC family transcriptional regulator 0.9706 180 289 GO:0003700
GO:0043565
AF-A0A4U6QG39-F1-model_v4 Helix-turn-helix transcriptional regulator 0.9631 196 290 GO:0003700
GO:0043565
AF-A0A1V3IPU0-F1-model_v4 HTH araC/xylS-type domain-containing protein 0.9588 193 287 GO:0003700
GO:0043565
AF-A0A3E0BXW3-F1-model_v4 deleted 0.9575 184 287

Feature Viewer

pLDDT pTM Quality
91.66 0.88 High
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Predicted Structure (AlphaFold2)

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