F413707

General Info

Members Datasets Scaffolds Average Seq Length
338 193 676 314

Family's Representative Sequence

Representative Sequence 3300049576|Ga0501040_0311761|Ga0501040_0311761_128_1072
Length 295
Sequence VADPVVIFRTPSPIEADVVKGLLETHGITAIITSDLSRTAFPFSLNELRVTVSAGEADSARRIIESHRDEVRPGRVVPFGAEFEPLERAIGYRFRDRGLLEHALTHRSRVHEDASGGVFDNESLEFLGDSVLGFVIADMLFRQFPEHNEGQKSKLKASLVSARGEEKTGGRRKHALIADCYEALIAAIYLDGGIEQAKGFIERQFEALIDEAGRTGAHAAFTEDYKSALQEWLQSHDRGLPVYRLAAEAGPAHRRHFEVEVLVNGEPVARAEGRSKKEAAQAAAKTALALLSQSR

Samples

Sample ID Description Type Environment
1 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
28 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
29 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
30 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
31 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
32 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
33 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
40 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
41 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
44 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
45 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
56 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
57 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
58 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
70 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
104 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
108 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
109 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
110 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
111 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
115 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
116 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
117 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
118 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
119 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
120 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
121 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
122 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
123 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
124 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
125 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
126 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
127 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
128 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
129 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
130 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
131 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
132 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
133 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
134 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
135 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
138 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
142 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
143 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
144 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
145 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
146 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
151 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
152 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
153 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
154 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
155 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
163 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
164 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
165 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
166 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
167 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
168 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
172 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
174 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
175 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
176 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
177 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
178 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
179 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
180 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
183 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
184 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
185 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
186 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
187 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
188 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
189 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
190 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
191 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
192 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
193 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.62
Nodule 0
Rhizoplane 5.62
Rhizosphere 88.76
Stem 0
Stem Tuber 0
Unclassified 10.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501040_0311761 3300049576 Bacteria 1125
2 Ga0065715_10002048 3300005293 Bacteria 5224
3 Ga0070676_10024708 3300005328 Bacteria 3388
4 Ga0070683_100009583 3300005329 Bacteria 8290
5 Ga0070683_100009628 3300005329 Bacteria 8270
6 Ga0070690_100146852 3300005330 Bacteria 1605
7 Ga0070670_100001123 3300005331 Bacteria 21292
8 Ga0070670_100017364 3300005331 Bacteria 6172
9 Ga0070670_100102906 3300005331 Bacteria 2460
10 Ga0068869_100033714 3300005334 Bacteria 3616
11 Ga0068869_100143365 3300005334 Bacteria 1847
12 Ga0068868_100256668 3300005338 Bacteria 1473
13 Ga0070691_10016782 3300005341 Bacteria 3367
14 Ga0070661_100002805 3300005344 Bacteria 11961
15 Ga0070669_100003572 3300005353 Bacteria 11225
16 Ga0070675_100016235 3300005354 Bacteria 5908
17 Ga0070674_100115679 3300005356 Bacteria 1977
18 Ga0070673_100010262 3300005364 Bacteria 6333
19 Ga0070688_100294543 3300005365 Bacteria 1171
20 Ga0070659_100079627 3300005366 Bacteria 2615
21 Ga0070659_100138291 3300005366 Bacteria 1982
22 Ga0070667_100141645 3300005367 Unclassified 2106
23 Ga0070713_100007411 3300005436 Bacteria 7699
24 Ga0070701_10035021 3300005438 Bacteria 2519
25 Ga0070711_100120458 3300005439 Bacteria 1940
26 Ga0070700_100037267 3300005441 Bacteria 2956
27 Ga0070662_100200518 3300005457 Unclassified 1583
28 Ga0070662_100207335 3300005457 Bacteria 1558
29 Ga0070662_100210281 3300005457 Bacteria 1548
30 Ga0068867_100001347 3300005459 Bacteria 16987
31 Ga0070706_100234849 3300005467 Bacteria 1712
32 Ga0070679_100041973 3300005530 Bacteria 4555
33 Ga0070684_100050474 3300005535 Bacteria 3614
34 Ga0070684_100061465 3300005535 Unclassified 3287
35 Ga0070672_100004595 3300005543 Bacteria 9039
36 Ga0070672_100106491 3300005543 Bacteria 2281
37 Ga0070686_100111978 3300005544 Bacteria 1861
38 Ga0070696_100087294 3300005546 Bacteria 2216
39 Ga0070693_100002039 3300005547 Bacteria 9239
40 Ga0070704_100141799 3300005549 Bacteria 1877
41 Ga0068855_100414153 3300005563 Bacteria 1475
42 Ga0068855_100617482 3300005563 Bacteria 1168
43 Ga0070664_100004292 3300005564 Bacteria 11464
44 Ga0070664_100120135 3300005564 Bacteria 2300
45 Ga0068857_100036515 3300005577 Unclassified 4354
46 Ga0068857_100087230 3300005577 Bacteria 2791
47 Ga0068857_100155137 3300005577 Bacteria 2076
48 Ga0068852_100216170 3300005616 Bacteria 1821
49 Ga0068866_10020187 3300005718 Bacteria 3048
50 Ga0068861_100078830 3300005719 Bacteria 2573
51 Ga0068863_100164159 3300005841 Bacteria 2129
52 Ga0068863_100266493 3300005841 Unclassified 1657
53 Ga0068860_100046693 3300005843 Bacteria 4130
54 Ga0075365_10030930 3300006038 Bacteria 3432
55 Ga0075365_10088038 3300006038 Unclassified 2112
56 Ga0075365_10145361 3300006038 Bacteria 1647
57 Ga0075368_10009057 3300006042 Bacteria 3573
58 Ga0075364_10032149 3300006051 Bacteria 3371
59 Ga0075362_10001172 3300006177 Bacteria 8200
60 Ga0075367_10017653 3300006178 Bacteria 3921
61 Ga0075366_10001838 3300006195 Bacteria 10699
62 Ga0075366_10008708 3300006195 Bacteria 5648
63 Ga0097621_100182025 3300006237 Bacteria 1816
64 Ga0075370_10001492 3300006353 Bacteria 10201
65 Ga0068871_100167621 3300006358 Bacteria 1881
66 Ga0075428_100000339 3300006844 Bacteria 46286
67 Ga0075428_100003525 3300006844 Bacteria 17140
68 Ga0075428_100007147 3300006844 Bacteria 12369
69 Ga0075428_100011835 3300006844 Bacteria 9708
70 Ga0075428_100048720 3300006844 Bacteria 4650
71 Ga0075430_100001386 3300006846 Bacteria 19674
72 Ga0075430_100015605 3300006846 Bacteria 6467
73 Ga0075430_100017205 3300006846 Bacteria 6157
74 Ga0075430_100060094 3300006846 Bacteria 3194
75 Ga0075431_100005390 3300006847 Bacteria 12631
76 Ga0075431_100016755 3300006847 Bacteria 7443
77 Ga0075431_100034111 3300006847 Bacteria 5244
78 Ga0075431_100038280 3300006847 Bacteria 4938
79 Ga0075431_100072323 3300006847 Bacteria 3558
80 Ga0075431_100217920 3300006847 Bacteria 1948
81 Ga0075433_10011816 3300006852 Bacteria 7033
82 Ga0075433_10047281 3300006852 Bacteria 3743
83 Ga0075433_10131982 3300006852 Bacteria 2219
84 Ga0075433_10314774 3300006852 Bacteria 1385
85 Ga0075434_100036867 3300006871 Bacteria 4838
86 Ga0075434_100147023 3300006871 Bacteria 2377
87 Ga0075434_100165432 3300006871 Bacteria 2232
88 Ga0075434_100193594 3300006871 Bacteria 2054
89 Ga0075429_100009829 3300006880 Bacteria 8296
90 Ga0075429_100011027 3300006880 Bacteria 7820
91 Ga0075429_100053759 3300006880 Bacteria 3504
92 Ga0075429_100132013 3300006880 Bacteria 2185
93 Ga0075435_100011500 3300007076 Bacteria 6517
94 Ga0075435_100139289 3300007076 Bacteria 2035
95 Ga0105240_10018911 3300009093 Bacteria 9225
96 Ga0105240_10047835 3300009093 Bacteria 5409
97 Ga0111539_10000996 3300009094 Bacteria 37109
98 Ga0111539_10018208 3300009094 Bacteria 8701
99 Ga0111539_10069940 3300009094 Unclassified 4143
100 Ga0111539_10506223 3300009094 Bacteria 1406
101 Ga0105247_10352596 3300009101 Unclassified 1035
102 Ga0114129_10000695 3300009147 Bacteria 42405
103 Ga0114129_10001668 3300009147 Bacteria 30238
104 Ga0114129_10015897 3300009147 Bacteria 10704
105 Ga0114129_10033460 3300009147 Bacteria 7264
106 Ga0114129_10114175 3300009147 Bacteria 3724
107 Ga0114129_10263489 3300009147 Bacteria 2309
108 Ga0114129_10565026 3300009147 Bacteria 1478
109 Ga0105243_10074556 3300009148 Bacteria 2752
110 Ga0105242_10015850 3300009176 Bacteria 5856
111 Ga0105248_10004717 3300009177 Bacteria 15088
112 Ga0105248_10006220 3300009177 Bacteria 13090
113 Ga0105248_10615099 3300009177 Unclassified 1226
114 Ga0105238_10160126 3300009551 Bacteria 2226
115 Ga0105249_10008957 3300009553 Bacteria 8741
116 Ga0105246_10064526 3300011119 Bacteria 2559
117 Ga0105246_10079554 3300011119 Bacteria 2331
118 Ga0157370_10082988 3300013104 Unclassified 3014
119 Ga0157369_10409910 3300013105 Unclassified 1406
120 Ga0157374_10145405 3300013296 Bacteria 2303
121 Ga0157372_10189570 3300013307 Unclassified 2381
122 Ga0157375_10014639 3300013308 Bacteria 7006
123 Ga0163163_10126238 3300014325 Bacteria 2596
124 Ga0157380_10276962 3300014326 Bacteria 1533
125 Ga0157380_10307108 3300014326 Bacteria 1464
126 Ga0157379_10186537 3300014968 Bacteria 1874
127 Ga0157376_10425377 3300014969 Bacteria 1290
128 Ga0207697_10000774 3300025315 Bacteria 18118
129 Ga0207642_10158276 3300025899 Bacteria 1213
130 Ga0207645_10003973 3300025907 Bacteria 11041
131 Ga0207695_10031452 3300025913 Bacteria 5820
132 Ga0207649_10021971 3300025920 Bacteria 3682
133 Ga0207652_10173810 3300025921 Bacteria 1934
134 Ga0207650_10055200 3300025925 Bacteria 2948
135 Ga0207700_10011453 3300025928 Bacteria 5655
136 Ga0207644_10337448 3300025931 Bacteria 1221
137 Ga0207690_10063698 3300025932 Bacteria 2515
138 Ga0207706_10243114 3300025933 Bacteria 1573
139 Ga0207686_10167421 3300025934 Bacteria 1546
140 Ga0207669_10173911 3300025937 Bacteria 1536
141 Ga0207691_10000951 3300025940 Bacteria 28682
142 Ga0207691_10034253 3300025940 Bacteria 4724
143 Ga0207711_10099706 3300025941 Bacteria 2568
144 Ga0207689_10007194 3300025942 Bacteria 9775
145 Ga0207689_10046429 3300025942 Bacteria 3590
146 Ga0207661_10013640 3300025944 Bacteria 5934
147 Ga0207661_10019963 3300025944 Bacteria 5002
148 Ga0207679_10030150 3300025945 Bacteria 3785
149 Ga0207679_10092078 3300025945 Unclassified 2348
150 Ga0207651_10034950 3300025960 Bacteria 3261
151 Ga0207712_10004650 3300025961 Bacteria 8673
152 Ga0207712_10437498 3300025961 Bacteria 1107
153 Ga0207677_10151947 3300026023 Bacteria 1788
154 Ga0207678_10100815 3300026067 Bacteria 2466
155 Ga0207678_10137918 3300026067 Bacteria 2081
156 Ga0207708_10019225 3300026075 Bacteria 5145
157 Ga0207641_10021559 3300026088 Bacteria 5295
158 Ga0207648_10001525 3300026089 Bacteria 25514
159 Ga0207674_10047074 3300026116 Unclassified 4424
160 Ga0207674_10100774 3300026116 Bacteria 2869
161 Ga0207674_10294973 3300026116 Bacteria 1570
162 Ga0207675_100031045 3300026118 Bacteria 4976
163 Ga0207683_10251741 3300026121 Bacteria 1612
164 Ga0207683_10454926 3300026121 Bacteria 1180
165 Ga0209813_10034399 3300027866 Bacteria 1512
166 Ga0207428_10002779 3300027907 Bacteria 17386
167 Ga0207428_10042716 3300027907 Bacteria 3665
168 Ga0268266_10047485 3300028379 Bacteria 3679
169 Ga0268264_10039108 3300028381 Bacteria 3919
170 Ga0307408_100077359 3300031548 Unclassified 2477
171 Ga0307405_10291612 3300031731 Bacteria 1233
172 Ga0307405_10314248 3300031731 Bacteria 1194
173 Ga0307413_10118721 3300031824 Bacteria 1786
174 Ga0307410_10379131 3300031852 Bacteria 1137
175 Ga0307412_10072341 3300031911 Bacteria 2356
176 Ga0307409_100032166 3300031995 Bacteria 3799
177 Ga0307409_100238246 3300031995 Bacteria 1654
178 Ga0307409_100304506 3300031995 Unclassified 1484
179 Ga0307416_100049053 3300032002 Bacteria 3354
180 Ga0307416_100065634 3300032002 Unclassified 2984
181 Ga0307416_100163441 3300032002 Bacteria 2061
182 Ga0307416_100548215 3300032002 Bacteria 1229
183 Ga0307414_10091436 3300032004 Unclassified 2262
184 Ga0307414_10299763 3300032004 Bacteria 1359
185 Ga0307411_10020504 3300032005 Bacteria 3846
186 Ga0307411_10146055 3300032005 Bacteria 1751
187 Ga0307415_100053454 3300032126 Bacteria 2752
188 Ga0307415_100151535 3300032126 Bacteria 1785
189 Ga0373926_0066831 3300035083 Bacteria 1317
190 Ga0373960_0072833 3300035121 Bacteria 1066
191 Ga0373961_0040547 3300035241 Bacteria 1342
192 Ga0373931_0321662 3300035691 Bacteria 961
193 Ga0373935_0326980 3300035692 Unclassified 1089
194 Ga0373947_0100139 3300035725 Bacteria 1820
195 Ga0373937_0085630 3300036401 Bacteria 2916
196 Ga0373925_0006587 3300037068 Bacteria 8532
197 Ga0439453_0008930 3300041408 Bacteria 1622
198 Ga0439431_0033837 3300041997 Bacteria 1279
199 Ga0439450_006599 3300042008 Unclassified 2095
200 Ga0439462_0018073 3300042015 Bacteria 1830
201 Ga0450896_017131 3300042133 Unclassified 1045
202 Ga0439446_0103098 3300042156 Bacteria 904
203 Ga0439435_0005422 3300042436 Unclassified 2805
204 Ga0439435_0033476 3300042436 Unclassified 1407
205 Ga0439460_0018389 3300042461 Bacteria 1882
206 Ga0451577_0013988 3300042876 Bacteria 7492
207 Ga0439440_0014673 3300042993 Bacteria 1694
208 Ga0451576_0368570 3300045051 Bacteria 1505
209 Ga0466967_0485181 3300045976 Bacteria 1211
210 Ga0495638_0021248 3300046460 Bacteria 4280
211 Ga0495667_0188101 3300046559 Bacteria 1324
212 Ga0495635_0269979 3300046663 Bacteria 1144
213 Ga0495674_0162677 3300047319 Bacteria 1867
214 Ga0496100_0366607 3300048903 Bacteria 1091
215 Ga0496101_0346291 3300048904 Bacteria 1167
216 Ga0496102_0187834 3300048905 Bacteria 1947
217 Ga0496104_0000830 3300048907 Bacteria 26651
218 Ga0496105_0261866 3300048908 Unclassified 1398
219 Ga0496106_0214505 3300048909 Bacteria 1534
220 Ga0496108_0025367 3300048911 Bacteria 4884
221 Ga0496109_0019449 3300048912 Bacteria 5990
222 Ga0496109_0047090 3300048912 Bacteria 3919
223 Ga0496109_0049387 3300048912 Bacteria 3830
224 Ga0496110_0053028 3300048913 Bacteria 3564
225 Ga0496110_0134974 3300048913 Unclassified 2229
226 Ga0496111_0367557 3300048914 Unclassified 1064
227 Ga0496112_0000626 3300048915 Bacteria 24545
228 Ga0496112_0031322 3300048915 Bacteria 5158
229 Ga0496112_0147568 3300048915 Bacteria 2320
230 Ga0496112_0231335 3300048915 Unclassified 1803
231 Ga0496113_0158372 3300048916 Unclassified 1789
232 Ga0496114_0388512 3300048917 Bacteria 1236
233 Ga0501033_0332660 3300049570 Bacteria 1066
234 Ga0501036_0099241 3300049572 Unclassified 2463
235 Ga0501036_0251155 3300049572 Bacteria 1482
236 Ga0501036_0312803 3300049572 Bacteria 1313
237 Ga0501037_0154474 3300049573 Bacteria 1639
238 Ga0501037_0163003 3300049573 Bacteria 1589
239 Ga0501039_0013118 3300049575 Bacteria 6336
240 Ga0501040_0058395 3300049576 Unclassified 2649
241 Ga0501040_0083922 3300049576 Bacteria 2210
242 Ga0501040_0111112 3300049576 Bacteria 1916
243 Ga0501043_0248261 3300049579 Bacteria 1371
244 Ga0501046_0258197 3300049580 Unclassified 1281
245 Ga0501047_0019840 3300049581 Bacteria 6453
246 Ga0501048_0014379 3300049582 Bacteria 5862
247 Ga0501048_0028396 3300049582 Bacteria 4060
248 Ga0501048_0066314 3300049582 Bacteria 2552
249 Ga0501069_0162502 3300049585 Bacteria 1286
250 Ga0501071_0006323 3300049587 Bacteria 7684
251 Ga0501071_0011884 3300049587 Bacteria 5880
252 Ga0501071_0080706 3300049587 Bacteria 2379
253 Ga0501071_0092327 3300049587 Bacteria 2225
254 Ga0501071_0098762 3300049587 Bacteria 2151
255 Ga0501071_0104148 3300049587 Bacteria 2094
256 Ga0501072_0011041 3300049588 Bacteria 6893
257 Ga0501072_0016233 3300049588 Bacteria 5712
258 Ga0501072_0042161 3300049588 Bacteria 3585
259 Ga0501072_0233586 3300049588 Unclassified 1465
260 Ga0501075_0011401 3300049591 Bacteria 6291
261 Ga0501075_0014228 3300049591 Bacteria 5701
262 Ga0501075_0016929 3300049591 Bacteria 5257
263 Ga0501075_0030789 3300049591 Bacteria 3977
264 Ga0501075_0038947 3300049591 Bacteria 3556
265 Ga0501075_0052703 3300049591 Bacteria 3059
266 Ga0501076_0006209 3300049592 Bacteria 8648
267 Ga0501076_0023443 3300049592 Bacteria 4758
268 Ga0501076_0053009 3300049592 Bacteria 3214
269 Ga0501076_0113720 3300049592 Bacteria 2190
270 Ga0501076_0224095 3300049592 Bacteria 1537
271 Ga0501076_0375450 3300049592 Bacteria 1169
272 Ga0501077_0009766 3300049593 Bacteria 5969
273 Ga0501077_0037768 3300049593 Unclassified 3075
274 Ga0501261_011527 3300049690 Bacteria 1179
275 Ga0501079_0007017 3300049741 Bacteria 8495
276 Ga0501079_0021100 3300049741 Bacteria 4980
277 Ga0501079_0268949 3300049741 Bacteria 1333
278 Ga0501079_0350067 3300049741 Bacteria 1157
279 Ga0501080_0020785 3300049742 Bacteria 6078
280 Ga0501080_0158052 3300049742 Bacteria 2094
281 Ga0501081_0036034 3300049743 Bacteria 3371
282 Ga0501081_0061801 3300049743 Bacteria 2597
283 Ga0501081_0083518 3300049743 Bacteria 2239
284 Ga0501035_0280726 3300049822 Bacteria 1408
285 Ga0501045_0031424 3300049824 Bacteria 3846
286 Ga0501045_0034448 3300049824 Bacteria 3676
287 Ga0501045_0118311 3300049824 Bacteria 1966
288 nmdc:mga00v17_12320_c1 3300050491 Bacteria 4717
289 nmdc:mga00v17_9461_c1 3300050491 Bacteria 5276
290 nmdc:mga0yw44_19933_c1 3300050492 Bacteria 3710
291 nmdc:mga0k408_5113_c1 3300050493 Bacteria 6946
292 nmdc:mga06z11_2051_c1 3300050494 Bacteria 7645
293 nmdc:mga06z11_38759_c1 3300050494 Bacteria 2368
294 nmdc:mga07m45_45621_c1 3300050496 Bacteria 2461
295 nmdc:mga05p37_1037_c1 3300050507 Bacteria 31680
296 nmdc:mga05p37_23128_c1 3300050507 Bacteria 7541
297 nmdc:mga05p37_28283_c1 3300050507 Bacteria 6836
298 nmdc:mga05p37_3083_c1 3300050507 Bacteria 19357
299 nmdc:mga05p37_78698_c1 3300050507 Bacteria 4060
300 nmdc:mga09592_224179_c1 3300050508 Bacteria 1629
301 nmdc:mga09592_237832_c1 3300050508 Bacteria 1578
302 nmdc:mga09592_5403_c1 3300050508 Bacteria 10389
303 nmdc:mga09592_74006_c1 3300050508 Unclassified 2895
304 nmdc:mga09592_95423_c1 3300050508 Bacteria 2544
305 nmdc:mga0qj67_10272_c1 3300050509 Bacteria 6993
306 nmdc:mga0qj67_1375_c1 3300050509 Bacteria 17028
307 nmdc:mga0qj67_64437_c1 3300050509 Bacteria 2915
308 nmdc:mga0qj67_85694_c1 3300050509 Bacteria 2527
309 nmdc:mga06r32_33710_c1 3300050510 Bacteria 4824
310 nmdc:mga06r32_379987_c1 3300050510 Bacteria 1395
311 nmdc:mga06r32_550405_c1 3300050510 Bacteria 1128
312 nmdc:mga06r32_83112_c1 3300050510 Unclassified 3120
313 nmdc:mga06r32_98137_c1 3300050510 Bacteria 2872
314 nmdc:mga08y16_1024_c1 3300050511 Bacteria 27419
315 nmdc:mga08y16_160049_c1 3300050511 Bacteria 2339
316 nmdc:mga08y16_298015_c1 3300050511 Bacteria 1662
317 nmdc:mga08y16_32262_c1 3300050511 Bacteria 5508
318 nmdc:mga0n895_160837_c1 3300050512 Bacteria 2277
319 nmdc:mga0n895_366876_c1 3300050512 Bacteria 1458
320 nmdc:mga0n895_43408_c1 3300050512 Bacteria 4381
321 nmdc:mga0rr50_46716_c1 3300050513 Bacteria 3189
322 nmdc:mga0rr50_7261_c1 3300050513 Bacteria 6816
323 nmdc:mga0a205_175150_c1 3300050515 Bacteria 2041
324 nmdc:mga0a205_38680_c1 3300050515 Bacteria 4590
325 nmdc:mga0a205_4367_c1 3300050515 Bacteria 12681
326 nmdc:mga0a205_66193_c3 3300050515 Bacteria 1475
327 Ga0500592_008133 3300053116 Bacteria 1663
328 Ga0501084_0010703 3300054114 Bacteria 7592
329 Ga0501084_0021088 3300054114 Bacteria 5435
330 Ga0590071_000623 3300059421 Bacteria 10108
331 Ga0590075_000078 3300059424 Bacteria 24962
332 Ga0590077_000093 3300059426 Bacteria 23043
333 Ga0501082_0064427 3300060353 Bacteria 3157
334 Ga0501082_0085467 3300060353 Bacteria 2721
335 Ga0501082_0110136 3300060353 Bacteria 2384
336 Ga0501082_0161031 3300060353 Bacteria 1950
337 Ga0501082_0262307 3300060353 Bacteria 1503
338 Ga0530510_0008503 3300061734 Bacteria 7159
339 Ga0501040_0311761
340 Ga0065715_10002048
341 Ga0070676_10024708
342 Ga0070683_100009583
343 Ga0070683_100009628
344 Ga0070690_100146852
345 Ga0070670_100001123
346 Ga0070670_100017364
347 Ga0070670_100102906
348 Ga0068869_100033714
349 Ga0068869_100143365
350 Ga0068868_100256668
351 Ga0070691_10016782
352 Ga0070661_100002805
353 Ga0070669_100003572
354 Ga0070675_100016235
355 Ga0070674_100115679
356 Ga0070673_100010262
357 Ga0070688_100294543
358 Ga0070659_100079627
359 Ga0070659_100138291
360 Ga0070667_100141645
361 Ga0070713_100007411
362 Ga0070701_10035021
363 Ga0070711_100120458
364 Ga0070700_100037267
365 Ga0070662_100200518
366 Ga0070662_100207335
367 Ga0070662_100210281
368 Ga0068867_100001347
369 Ga0070706_100234849
370 Ga0070679_100041973
371 Ga0070684_100050474
372 Ga0070684_100061465
373 Ga0070672_100004595
374 Ga0070672_100106491
375 Ga0070686_100111978
376 Ga0070696_100087294
377 Ga0070693_100002039
378 Ga0070704_100141799
379 Ga0068855_100414153
380 Ga0068855_100617482
381 Ga0070664_100004292
382 Ga0070664_100120135
383 Ga0068857_100036515
384 Ga0068857_100087230
385 Ga0068857_100155137
386 Ga0068852_100216170
387 Ga0068866_10020187
388 Ga0068861_100078830
389 Ga0068863_100164159
390 Ga0068863_100266493
391 Ga0068860_100046693
392 Ga0075365_10030930
393 Ga0075365_10088038
394 Ga0075365_10145361
395 Ga0075368_10009057
396 Ga0075364_10032149
397 Ga0075362_10001172
398 Ga0075367_10017653
399 Ga0075366_10001838
400 Ga0075366_10008708
401 Ga0097621_100182025
402 Ga0075370_10001492
403 Ga0068871_100167621
404 Ga0075428_100000339
405 Ga0075428_100003525
406 Ga0075428_100007147
407 Ga0075428_100011835
408 Ga0075428_100048720
409 Ga0075430_100001386
410 Ga0075430_100015605
411 Ga0075430_100017205
412 Ga0075430_100060094
413 Ga0075431_100005390
414 Ga0075431_100016755
415 Ga0075431_100034111
416 Ga0075431_100038280
417 Ga0075431_100072323
418 Ga0075431_100217920
419 Ga0075433_10011816
420 Ga0075433_10047281
421 Ga0075433_10131982
422 Ga0075433_10314774
423 Ga0075434_100036867
424 Ga0075434_100147023
425 Ga0075434_100165432
426 Ga0075434_100193594
427 Ga0075429_100009829
428 Ga0075429_100011027
429 Ga0075429_100053759
430 Ga0075429_100132013
431 Ga0075435_100011500
432 Ga0075435_100139289
433 Ga0105240_10018911
434 Ga0105240_10047835
435 Ga0111539_10000996
436 Ga0111539_10018208
437 Ga0111539_10069940
438 Ga0111539_10506223
439 Ga0105247_10352596
440 Ga0114129_10000695
441 Ga0114129_10001668
442 Ga0114129_10015897
443 Ga0114129_10033460
444 Ga0114129_10114175
445 Ga0114129_10263489
446 Ga0114129_10565026
447 Ga0105243_10074556
448 Ga0105242_10015850
449 Ga0105248_10004717
450 Ga0105248_10006220
451 Ga0105248_10615099
452 Ga0105238_10160126
453 Ga0105249_10008957
454 Ga0105246_10064526
455 Ga0105246_10079554
456 Ga0157370_10082988
457 Ga0157369_10409910
458 Ga0157374_10145405
459 Ga0157372_10189570
460 Ga0157375_10014639
461 Ga0163163_10126238
462 Ga0157380_10276962
463 Ga0157380_10307108
464 Ga0157379_10186537
465 Ga0157376_10425377
466 Ga0207697_10000774
467 Ga0207642_10158276
468 Ga0207645_10003973
469 Ga0207695_10031452
470 Ga0207649_10021971
471 Ga0207652_10173810
472 Ga0207650_10055200
473 Ga0207700_10011453
474 Ga0207644_10337448
475 Ga0207690_10063698
476 Ga0207706_10243114
477 Ga0207686_10167421
478 Ga0207669_10173911
479 Ga0207691_10000951
480 Ga0207691_10034253
481 Ga0207711_10099706
482 Ga0207689_10007194
483 Ga0207689_10046429
484 Ga0207661_10013640
485 Ga0207661_10019963
486 Ga0207679_10030150
487 Ga0207679_10092078
488 Ga0207651_10034950
489 Ga0207712_10004650
490 Ga0207712_10437498
491 Ga0207677_10151947
492 Ga0207678_10100815
493 Ga0207678_10137918
494 Ga0207708_10019225
495 Ga0207641_10021559
496 Ga0207648_10001525
497 Ga0207674_10047074
498 Ga0207674_10100774
499 Ga0207674_10294973
500 Ga0207675_100031045
501 Ga0207683_10251741
502 Ga0207683_10454926
503 Ga0209813_10034399
504 Ga0207428_10002779
505 Ga0207428_10042716
506 Ga0268266_10047485
507 Ga0268264_10039108
508 Ga0307408_100077359
509 Ga0307405_10291612
510 Ga0307405_10314248
511 Ga0307413_10118721
512 Ga0307410_10379131
513 Ga0307412_10072341
514 Ga0307409_100032166
515 Ga0307409_100238246
516 Ga0307409_100304506
517 Ga0307416_100049053
518 Ga0307416_100065634
519 Ga0307416_100163441
520 Ga0307416_100548215
521 Ga0307414_10091436
522 Ga0307414_10299763
523 Ga0307411_10020504
524 Ga0307411_10146055
525 Ga0307415_100053454
526 Ga0307415_100151535
527 Ga0373926_0066831
528 Ga0373960_0072833
529 Ga0373961_0040547
530 Ga0373931_0321662
531 Ga0373935_0326980
532 Ga0373947_0100139
533 Ga0373937_0085630
534 Ga0373925_0006587
535 Ga0439453_0008930
536 Ga0439431_0033837
537 Ga0439450_006599
538 Ga0439462_0018073
539 Ga0450896_017131
540 Ga0439446_0103098
541 Ga0439435_0005422
542 Ga0439435_0033476
543 Ga0439460_0018389
544 Ga0451577_0013988
545 Ga0439440_0014673
546 Ga0451576_0368570
547 Ga0466967_0485181
548 Ga0495638_0021248
549 Ga0495667_0188101
550 Ga0495635_0269979
551 Ga0495674_0162677
552 Ga0496100_0366607
553 Ga0496101_0346291
554 Ga0496102_0187834
555 Ga0496104_0000830
556 Ga0496105_0261866
557 Ga0496106_0214505
558 Ga0496108_0025367
559 Ga0496109_0019449
560 Ga0496109_0047090
561 Ga0496109_0049387
562 Ga0496110_0053028
563 Ga0496110_0134974
564 Ga0496111_0367557
565 Ga0496112_0000626
566 Ga0496112_0031322
567 Ga0496112_0147568
568 Ga0496112_0231335
569 Ga0496113_0158372
570 Ga0496114_0388512
571 Ga0501033_0332660
572 Ga0501036_0099241
573 Ga0501036_0251155
574 Ga0501036_0312803
575 Ga0501037_0154474
576 Ga0501037_0163003
577 Ga0501039_0013118
578 Ga0501040_0058395
579 Ga0501040_0083922
580 Ga0501040_0111112
581 Ga0501043_0248261
582 Ga0501046_0258197
583 Ga0501047_0019840
584 Ga0501048_0014379
585 Ga0501048_0028396
586 Ga0501048_0066314
587 Ga0501069_0162502
588 Ga0501071_0006323
589 Ga0501071_0011884
590 Ga0501071_0080706
591 Ga0501071_0092327
592 Ga0501071_0098762
593 Ga0501071_0104148
594 Ga0501072_0011041
595 Ga0501072_0016233
596 Ga0501072_0042161
597 Ga0501072_0233586
598 Ga0501075_0011401
599 Ga0501075_0014228
600 Ga0501075_0016929
601 Ga0501075_0030789
602 Ga0501075_0038947
603 Ga0501075_0052703
604 Ga0501076_0006209
605 Ga0501076_0023443
606 Ga0501076_0053009
607 Ga0501076_0113720
608 Ga0501076_0224095
609 Ga0501076_0375450
610 Ga0501077_0009766
611 Ga0501077_0037768
612 Ga0501261_011527
613 Ga0501079_0007017
614 Ga0501079_0021100
615 Ga0501079_0268949
616 Ga0501079_0350067
617 Ga0501080_0020785
618 Ga0501080_0158052
619 Ga0501081_0036034
620 Ga0501081_0061801
621 Ga0501081_0083518
622 Ga0501035_0280726
623 Ga0501045_0031424
624 Ga0501045_0034448
625 Ga0501045_0118311
626 nmdc:mga00v17_12320_c1
627 nmdc:mga00v17_9461_c1
628 nmdc:mga0yw44_19933_c1
629 nmdc:mga0k408_5113_c1
630 nmdc:mga06z11_2051_c1
631 nmdc:mga06z11_38759_c1
632 nmdc:mga07m45_45621_c1
633 nmdc:mga05p37_1037_c1
634 nmdc:mga05p37_23128_c1
635 nmdc:mga05p37_28283_c1
636 nmdc:mga05p37_3083_c1
637 nmdc:mga05p37_78698_c1
638 nmdc:mga09592_224179_c1
639 nmdc:mga09592_237832_c1
640 nmdc:mga09592_5403_c1
641 nmdc:mga09592_74006_c1
642 nmdc:mga09592_95423_c1
643 nmdc:mga0qj67_10272_c1
644 nmdc:mga0qj67_1375_c1
645 nmdc:mga0qj67_64437_c1
646 nmdc:mga0qj67_85694_c1
647 nmdc:mga06r32_33710_c1
648 nmdc:mga06r32_379987_c1
649 nmdc:mga06r32_550405_c1
650 nmdc:mga06r32_83112_c1
651 nmdc:mga06r32_98137_c1
652 nmdc:mga08y16_1024_c1
653 nmdc:mga08y16_160049_c1
654 nmdc:mga08y16_298015_c1
655 nmdc:mga08y16_32262_c1
656 nmdc:mga0n895_160837_c1
657 nmdc:mga0n895_366876_c1
658 nmdc:mga0n895_43408_c1
659 nmdc:mga0rr50_46716_c1
660 nmdc:mga0rr50_7261_c1
661 nmdc:mga0a205_175150_c1
662 nmdc:mga0a205_38680_c1
663 nmdc:mga0a205_4367_c1
664 nmdc:mga0a205_66193_c3
665 Ga0500592_008133
666 Ga0501084_0010703
667 Ga0501084_0021088
668 Ga0590071_000623
669 Ga0590075_000078
670 Ga0590077_000093
671 Ga0501082_0064427
672 Ga0501082_0085467
673 Ga0501082_0110136
674 Ga0501082_0161031
675 Ga0501082_0262307
676 Ga0530510_0008503

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00035

dsrm

Double-stranded RNA binding motif

225

291

0.96

PF00636

Ribonuclease_3

Ribonuclease III domain

122

168

0.96

PF14622

Ribonucleas_3_3

Ribonuclease-III-like

159

208

0.93

PF09413

DUF2007

Putative prokaryotic signal transducing protein

5

68

0.87

PF14622

Ribonucleas_3_3

Ribonuclease-III-like

96

163

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3adl-assembly1.cif.gz_A structure of trbp2 and its molecule implications for mirna processing 0.9491 244 310
1di2-assembly1.cif.gz_A crystal structure of a dsrna-binding domain complexed with dsrna: molecular basis of double-stranded rna-protein interactions 0.9253 244 310
7v6c-assembly1.cif.gz_B structure of the dicer-2-r2d2 heterodimer bound to small rna duplex 0.9173 241 312
2cpn-assembly1.cif.gz_A solution structure of the second dsrbd of tar rna-binding protein 2 0.9117 243 311
7e4v-assembly1.cif.gz_A crystal structure of mosquito staufen dsrna binding domain 4 0.8993 243 310
ID Description Score Start End Superfamily
af_Q2FZ50_172_239_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.9848 243 306 3.30.160.20
af_P9WH03_159_229_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.9645 243 310 3.30.160.20
af_Q9VNC1_228_308_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.9465 243 310 3.30.160.20
af_Q9H9J2_234_319_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.9456 243 310 3.30.160.20
af_O01326_986_1068_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.9407 245 313 3.30.160.20
ID Description Score Start End GO Terms
AF-A0A7Y5CEQ5-F1-model_v4 deleted 0.9854 242 309
AF-A0A6N6S508-F1-model_v4 DRBM domain-containing protein 0.9702 243 313 GO:0003723
AF-A0A7R9QJA9-F1-model_v4 DRBM domain-containing protein 0.9672 244 313 GO:0003725
GO:0005634
GO:0005737
GO:0016442
GO:0030422
GO:0035197
GO:0070578
GO:0070920
AF-A0A838J6G6-F1-model_v4 Ribonuclease III 0.9671 243 310 GO:0003725
GO:0005737
GO:0016442
GO:0030422
GO:0035197
GO:0070578
GO:0070920
AF-A0A832AU94-F1-model_v4 DRBM domain-containing protein 0.9647 243 312 GO:0003725
GO:0005737
GO:0016442
GO:0030422
GO:0035197
GO:0070578
GO:0070920

Map