F413486

General Info

Members Datasets Scaffolds Average Seq Length
338 205 676 537

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10018299|Ga0105248_100182992
Length 563
Sequence MSSPGARSDRSETPRAGTTSRAGGGMSDEALPAFSAATRGDRTAAWAALAGHYQAHGRDFDLRDAFARDPRRFEALSFEAPDVFVDLSKNLVDVATMRFLADLARECGVEAQRDAMLAGAVINTTERRAVLHTALRAPRGAGPFSDEVHGVLDAMLAFAESVRGRAAGPAAPRLRHVVNIGIGGSDLGPQMVVRALADVAHPGLTFHFVANVDGADLAAVLARVAPAETLFVVASKTFTTQETMANAETARAWFVARGGTRIDEHFVAATSNVEAAARFGITRTFGFWDWVGGRYSLWSAIGLPIAIAIGAERFRELLAGARAMDEHFASAPVERNLPMLLGLIDVWYRNFHGFTSRCIAPYAQALQRLPAFLQQLEMESNGKRVDRSGAALPFATSPVVWGEPGTNAQHAYFQMLHQGSDVVPVEFILLARSSALASGIAPEAIARQHRMLLANGLAQSQALMRGKASTDEPHRHFPGNRPSTTLLLEQLTPRSLGALLALYEHRVFTSGAVWGIDSFDQWGVELGKTLGARLLPLLEPGAESSLPADIDASTAGLLRRSGA

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
6 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
7 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
8 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
11 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
12 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
13 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
14 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
15 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
19 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
20 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
24 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
33 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
37 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
38 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
39 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
40 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
41 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
42 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
43 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
44 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
47 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
73 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
114 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
117 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
118 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
122 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
123 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
124 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
125 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
131 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
132 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
133 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
134 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
135 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
136 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
137 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
138 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
139 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
140 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
141 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
142 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
143 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
144 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
145 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
146 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
147 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
148 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
149 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
150 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
151 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
152 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
153 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
154 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
155 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
156 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
157 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
158 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
159 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
160 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
161 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
162 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
163 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
164 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
165 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
166 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
167 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
168 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
169 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
170 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
171 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
172 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
173 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
174 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
175 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
176 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
177 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
178 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
179 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
180 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
181 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
182 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
183 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
184 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
185 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
186 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
187 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
190 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
191 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
192 2513237150 Cupriavidus taiwanensis STM6018 Isolate Nodule
193 2513237165 Cupriavidus neocaledonicus STM6070 Isolate Nodule
194 2643221570 Acidovorax sp. Root568 Isolate Unclassified
195 2643221596 Acidovorax sp. Root70 Isolate Unclassified
196 2643221644 Rhizobacter sp. Root1221 Isolate Unclassified
197 2643221652 Acidovorax sp. Root402 Isolate Unclassified
198 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
199 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
200 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
201 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
202 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
203 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
204 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
205 644736347 Cupriavidus taiwanensis LMG 19424 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.86
Metatranscriptomes 0
Isolates 4.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.83
Nodule 1.78
Rhizoplane 0.59
Rhizosphere 79.59
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10018299 3300009177 Bacteria 7736
2 JGI25151J46595_10001220 3300003187 Bacteria 18383
3 JGI25406J46586_10006566 3300003203 Bacteria 5350
4 Ga0055526_1002549 3300003771 Bacteria 12236
5 Ga0055526_1002553 3300003771 Bacteria 12225
6 Ga0055526_1011862 3300003771 Bacteria 3866
7 Ga0055537_1004055 3300003773 Bacteria 4297
8 Ga0055524_1000052 3300003775 Bacteria 144959
9 Ga0055524_1000401 3300003775 Bacteria 37009
10 Ga0055536_1000365 3300003781 Bacteria 33614
11 Ga0055534_1001121 3300003784 Bacteria 11364
12 Ga0055534_1002547 3300003784 Bacteria 6249
13 Ga0070676_10002126 3300005328 Bacteria 10087
14 Ga0070676_10009393 3300005328 Bacteria 5284
15 Ga0070676_10016837 3300005328 Bacteria 4041
16 Ga0070676_10023155 3300005328 Bacteria 3489
17 Ga0070676_10024327 3300005328 Bacteria 3411
18 Ga0070670_100002010 3300005331 Bacteria 16637
19 Ga0070670_100005359 3300005331 Bacteria 10824
20 Ga0070670_100039632 3300005331 Bacteria 4051
21 Ga0068869_100005348 3300005334 Bacteria 8072
22 Ga0068869_100048670 3300005334 Bacteria 3067
23 Ga0070666_10000314 3300005335 Bacteria 31000
24 Ga0068868_100006045 3300005338 Bacteria 8549
25 Ga0068868_100006540 3300005338 Bacteria 8254
26 Ga0070661_100005819 3300005344 Bacteria 8479
27 Ga0070668_100019320 3300005347 Bacteria 5128
28 Ga0070668_100083815 3300005347 Bacteria 2503
29 Ga0070669_100010108 3300005353 Bacteria 6712
30 Ga0070675_100001222 3300005354 Bacteria 18668
31 Ga0070675_100012953 3300005354 Bacteria 6545
32 Ga0070671_100003684 3300005355 Bacteria 12018
33 Ga0070671_100011354 3300005355 Bacteria 7161
34 Ga0070671_100013127 3300005355 Bacteria 6674
35 Ga0070671_100076244 3300005355 Bacteria 2801
36 Ga0070674_100006603 3300005356 Bacteria 6782
37 Ga0070674_100023605 3300005356 Bacteria 3982
38 Ga0070674_100044323 3300005356 Bacteria 3032
39 Ga0070673_100001110 3300005364 Bacteria 15434
40 Ga0070673_100010776 3300005364 Bacteria 6205
41 Ga0070673_100022843 3300005364 Bacteria 4561
42 Ga0070673_100050218 3300005364 Bacteria 3261
43 Ga0070659_100001278 3300005366 Bacteria 18241
44 Ga0070667_100001066 3300005367 Bacteria 25082
45 Ga0070667_100057692 3300005367 Bacteria 3282
46 Ga0070663_100102238 3300005455 Bacteria 2140
47 Ga0070678_100003900 3300005456 Bacteria 8383
48 Ga0070678_100013082 3300005456 Bacteria 5188
49 Ga0070678_100035956 3300005456 Bacteria 3463
50 Ga0070678_100041668 3300005456 Bacteria 3257
51 Ga0070678_100061049 3300005456 Bacteria 2777
52 Ga0070678_100089897 3300005456 Bacteria 2352
53 Ga0070662_100029433 3300005457 Bacteria 3833
54 Ga0070662_100032425 3300005457 Bacteria 3672
55 Ga0068867_100000415 3300005459 Bacteria 28504
56 Ga0068867_100000765 3300005459 Bacteria 21678
57 Ga0068867_100007201 3300005459 Bacteria 7862
58 Ga0070685_10022240 3300005466 Bacteria 3454
59 Ga0070706_100007448 3300005467 Bacteria 10261
60 Ga0068853_100134398 3300005539 Bacteria 2216
61 Ga0070672_100005783 3300005543 Bacteria 8247
62 Ga0070672_100006201 3300005543 Bacteria 8007
63 Ga0070672_100011060 3300005543 Bacteria 6283
64 Ga0070672_100013371 3300005543 Bacteria 5797
65 Ga0070672_100108628 3300005543 Bacteria 2259
66 Ga0068855_100244253 3300005563 Bacteria 2005
67 Ga0068854_100038458 3300005578 Bacteria 3365
68 Ga0068854_100052832 3300005578 Bacteria 2915
69 Ga0070702_100050215 3300005615 Bacteria 2381
70 Ga0068852_100017319 3300005616 Bacteria 5650
71 Ga0068852_100030527 3300005616 Bacteria 4438
72 Ga0068852_100057764 3300005616 Bacteria 3358
73 Ga0068859_100056089 3300005617 Bacteria 3964
74 Ga0068864_100001007 3300005618 Bacteria 23546
75 Ga0068864_100014676 3300005618 Bacteria 6506
76 Ga0068866_10005869 3300005718 Bacteria 5099
77 Ga0068861_100000811 3300005719 Bacteria 18865
78 Ga0068861_100002131 3300005719 Bacteria 12808
79 Ga0068861_100123659 3300005719 Bacteria 2090
80 Ga0068863_100005657 3300005841 Bacteria 12273
81 Ga0068863_100010671 3300005841 Bacteria 8919
82 Ga0068863_100078816 3300005841 Bacteria 3120
83 Ga0068858_100001922 3300005842 Bacteria 21173
84 Ga0068858_100012382 3300005842 Bacteria 8042
85 Ga0068858_100026113 3300005842 Bacteria 5431
86 Ga0068860_100002168 3300005843 Bacteria 20685
87 Ga0068860_100030737 3300005843 Bacteria 5164
88 Ga0068860_100102070 3300005843 Bacteria 2737
89 Ga0068862_100003580 3300005844 Bacteria 13297
90 Ga0081539_10000101 3300005985 Bacteria 198612
91 Ga0075368_10008396 3300006042 Bacteria 3676
92 Ga0075367_10014800 3300006178 Bacteria 4226
93 Ga0075366_10002155 3300006195 Bacteria 10029
94 Ga0075366_10002865 3300006195 Bacteria 8942
95 Ga0075366_10005926 3300006195 Bacteria 6646
96 Ga0075366_10023476 3300006195 Bacteria 3593
97 Ga0075366_10042299 3300006195 Bacteria 2697
98 Ga0097621_100151238 3300006237 Bacteria 1991
99 Ga0075370_10000354 3300006353 Bacteria 16716
100 Ga0075370_10007613 3300006353 Bacteria 5524
101 Ga0075370_10008417 3300006353 Bacteria 5309
102 Ga0068871_100009894 3300006358 Bacteria 6922
103 Ga0068871_100022166 3300006358 Bacteria 4897
104 Ga0068871_100080853 3300006358 Bacteria 2691
105 Ga0075429_100004508 3300006880 Bacteria 11984
106 Ga0068865_100010850 3300006881 Bacteria 5684
107 Ga0097620_100056091 3300006931 Bacteria 3964
108 Ga0099826_10000004 3300006948 Bacteria 802669
109 Ga0105240_10002152 3300009093 Bacteria 32168
110 Ga0105243_10151371 3300009148 Bacteria 1990
111 Ga0105248_10009179 3300009177 Bacteria 10878
112 Ga0105237_10003697 3300009545 Bacteria 18034
113 Ga0105237_10166954 3300009545 Bacteria 2200
114 Ga0105238_10002525 3300009551 Bacteria 18285
115 Ga0105238_10064761 3300009551 Bacteria 3655
116 Ga0105249_10072881 3300009553 Bacteria 3176
117 Ga0105239_10001461 3300010375 Bacteria 31458
118 Ga0105239_10011857 3300010375 Bacteria 9725
119 Ga0105239_10027227 3300010375 Bacteria 6293
120 Ga0157371_10037456 3300013102 Bacteria 3470
121 Ga0157378_10024287 3300013297 Bacteria 5331
122 Ga0157378_10025103 3300013297 Bacteria 5251
123 Ga0163162_10004570 3300013306 Bacteria 13335
124 Ga0157375_10020048 3300013308 Bacteria 6100
125 Ga0157375_10076607 3300013308 Bacteria 3372
126 Ga0163163_10003646 3300014325 Bacteria 13092
127 Ga0163163_10027752 3300014325 Bacteria 5428
128 Ga0163163_10049249 3300014325 Bacteria 4145
129 Ga0157377_10012006 3300014745 Bacteria 4344
130 Ga0157379_10011850 3300014968 Bacteria 7617
131 Ga0157379_10016550 3300014968 Bacteria 6485
132 Ga0157379_10022409 3300014968 Bacteria 5595
133 Ga0157379_10065243 3300014968 Bacteria 3255
134 Ga0157376_10075097 3300014969 Bacteria 2883
135 Ga0183362_10003 3300015683 Bacteria 977584
136 Ga0163161_10035355 3300017792 Bacteria 3576
137 Ga0209565_1000066 3300025263 Bacteria 173062
138 Ga0209675_1000084 3300025291 Bacteria 152066
139 Ga0209675_1001045 3300025291 Bacteria 17234
140 Ga0209676_1000014 3300025292 Bacteria 793514
141 Ga0209025_1000365 3300025294 Bacteria 95783
142 Ga0209025_1000437 3300025294 Bacteria 82190
143 Ga0209025_1002968 3300025294 Bacteria 16847
144 Ga0209564_1000539 3300025295 Bacteria 61208
145 Ga0209564_1000901 3300025295 Bacteria 38935
146 Ga0209564_1002826 3300025295 Bacteria 12866
147 Ga0209256_1000331 3300025299 Bacteria 79942
148 Ga0209051_1010535 3300025303 Bacteria 4655
149 Ga0207697_10024688 3300025315 Bacteria 2460
150 Ga0207682_10009132 3300025893 Bacteria 3917
151 Ga0207682_10010678 3300025893 Bacteria 3593
152 Ga0207682_10023282 3300025893 Bacteria 2445
153 Ga0207642_10011204 3300025899 Bacteria 3189
154 Ga0207680_10000560 3300025903 Bacteria 17593
155 Ga0207645_10003759 3300025907 Bacteria 11404
156 Ga0207645_10006179 3300025907 Bacteria 8599
157 Ga0207645_10044752 3300025907 Bacteria 2831
158 Ga0207705_10113062 3300025909 Bacteria 2008
159 Ga0207684_10003355 3300025910 Bacteria 15680
160 Ga0207671_10002223 3300025914 Bacteria 21051
161 Ga0207671_10104547 3300025914 Bacteria 2148
162 Ga0207662_10002354 3300025918 Bacteria 9475
163 Ga0207657_10030910 3300025919 Bacteria 4854
164 Ga0207649_10008564 3300025920 Bacteria 5580
165 Ga0207681_10006425 3300025923 Bacteria 7216
166 Ga0207681_10032320 3300025923 Bacteria 3425
167 Ga0207694_10008493 3300025924 Bacteria 7755
168 Ga0207650_10000230 3300025925 Bacteria 62576
169 Ga0207650_10000254 3300025925 Bacteria 58014
170 Ga0207659_10000455 3300025926 Bacteria 24611
171 Ga0207659_10027675 3300025926 Bacteria 3842
172 Ga0207644_10000556 3300025931 Bacteria 24008
173 Ga0207644_10012853 3300025931 Bacteria 5569
174 Ga0207644_10015590 3300025931 Bacteria 5103
175 Ga0207644_10017310 3300025931 Bacteria 4865
176 Ga0207690_10002003 3300025932 Bacteria 12479
177 Ga0207706_10005161 3300025933 Bacteria 12189
178 Ga0207706_10025230 3300025933 Bacteria 5329
179 Ga0207706_10030428 3300025933 Bacteria 4815
180 Ga0207706_10077738 3300025933 Bacteria 2918
181 Ga0207704_10018871 3300025938 Bacteria 3610
182 Ga0207704_10019861 3300025938 Bacteria 3540
183 Ga0207691_10005346 3300025940 Bacteria 12393
184 Ga0207691_10012703 3300025940 Bacteria 8066
185 Ga0207691_10016079 3300025940 Bacteria 7109
186 Ga0207691_10037761 3300025940 Bacteria 4471
187 Ga0207691_10063621 3300025940 Bacteria 3345
188 Ga0207691_10098411 3300025940 Bacteria 2613
189 Ga0207711_10004494 3300025941 Bacteria 11886
190 Ga0207689_10053483 3300025942 Bacteria 3327
191 Ga0207661_10051595 3300025944 Bacteria 3283
192 Ga0207651_10001368 3300025960 Bacteria 11031
193 Ga0207651_10006942 3300025960 Bacteria 5989
194 Ga0207651_10015360 3300025960 Bacteria 4448
195 Ga0207651_10030421 3300025960 Bacteria 3437
196 Ga0207651_10031109 3300025960 Bacteria 3407
197 Ga0207712_10033766 3300025961 Bacteria 3461
198 Ga0207658_10001039 3300025986 Bacteria 22553
199 Ga0207677_10007397 3300026023 Bacteria 6072
200 Ga0207703_10004604 3300026035 Bacteria 11285
201 Ga0207703_10008165 3300026035 Bacteria 8271
202 Ga0207703_10047066 3300026035 Bacteria 3476
203 Ga0207678_10008923 3300026067 Bacteria 8827
204 Ga0207678_10019646 3300026067 Bacteria 5941
205 Ga0207641_10004164 3300026088 Bacteria 12604
206 Ga0207641_10074853 3300026088 Bacteria 2922
207 Ga0207641_10140518 3300026088 Bacteria 2178
208 Ga0207648_10000133 3300026089 Bacteria 73580
209 Ga0207648_10002064 3300026089 Bacteria 21895
210 Ga0207648_10014209 3300026089 Bacteria 7364
211 Ga0207648_10184399 3300026089 Bacteria 1848
212 Ga0207676_10001015 3300026095 Bacteria 21515
213 Ga0207676_10015560 3300026095 Bacteria 5490
214 Ga0207674_10029319 3300026116 Bacteria 5793
215 Ga0207675_100000103 3300026118 Bacteria 67419
216 Ga0207675_100001938 3300026118 Bacteria 20656
217 Ga0207675_100002029 3300026118 Bacteria 20193
218 Ga0207683_10006621 3300026121 Bacteria 9916
219 Ga0207683_10014499 3300026121 Bacteria 6712
220 Ga0207683_10082423 3300026121 Bacteria 2857
221 Ga0207683_10097313 3300026121 Bacteria 2624
222 Ga0207683_10111268 3300026121 Bacteria 2452
223 Ga0207698_10004971 3300026142 Bacteria 8151
224 Ga0209282_1000035 3300027666 Bacteria 137066
225 Ga0268265_10003106 3300028380 Bacteria 12116
226 Ga0268265_10015342 3300028380 Bacteria 5241
227 Ga0268264_10001565 3300028381 Bacteria 21215
228 Ga0268264_10015207 3300028381 Bacteria 6313
229 Ga0268264_10045281 3300028381 Bacteria 3652
230 Ga0268264_10064731 3300028381 Bacteria 3078
231 Ga0307517_10064863 3300028786 Bacteria 3389
232 Ga0307515_10015539 3300028794 Bacteria 14015
233 Ga0307515_10025981 3300028794 Bacteria 10102
234 Ga0265316_10000026 3300031344 Bacteria 165508
235 Ga0307513_10118265 3300031456 Bacteria 2625
236 Ga0307408_100022347 3300031548 Bacteria 4297
237 Ga0307514_10001392 3300031649 Bacteria 30115
238 Ga0307516_10000303 3300031730 Bacteria 63898
239 Ga0307516_10001192 3300031730 Bacteria 36321
240 Ga0307405_10002347 3300031731 Bacteria 8320
241 Ga0307405_10008363 3300031731 Bacteria 5238
242 Ga0307413_10035429 3300031824 Bacteria 2862
243 Ga0307410_10000631 3300031852 Bacteria 14518
244 Ga0307406_10019923 3300031901 Bacteria 3942
245 Ga0307412_10003892 3300031911 Bacteria 8310
246 Ga0307409_100000891 3300031995 Bacteria 13833
247 Ga0307409_100013906 3300031995 Bacteria 5206
248 Ga0307416_100047180 3300032002 Bacteria 3407
249 Ga0307415_100009773 3300032126 Bacteria 5398
250 Ga0373951_0013826 3300035091 Bacteria 1815
251 Ga0373925_0003071 3300037068 Bacteria 13127
252 Ga0373925_0011597 3300037068 Bacteria 6375
253 Ga0395905_0021835 3300037471 Bacteria 6054
254 Ga0395905_0028847 3300037471 Bacteria 5230
255 Ga0439436_0009290 3300041404 Bacteria 3013
256 Ga0439447_009956 3300041407 Bacteria 2849
257 Ga0439466_0017609 3300041411 Bacteria 2573
258 Ga0439465_0000146 3300041413 Bacteria 17383
259 Ga0439431_0000808 3300041997 Bacteria 6762
260 Ga0439433_0002086 3300041999 Bacteria 4208
261 Ga0439432_012286 3300042006 Bacteria 2934
262 Ga0439449_0000957 3300042007 Bacteria 11322
263 Ga0439449_0002974 3300042007 Bacteria 6605
264 Ga0439450_012790 3300042008 Bacteria 1673
265 Ga0439452_001204 3300042010 Bacteria 11106
266 Ga0450919_000488 3300042121 Bacteria 4956
267 Ga0439434_0009758 3300042435 Bacteria 2823
268 Ga0439464_0004510 3300042439 Bacteria 3565
269 Ga0450918_000743 3300042531 Bacteria 6891
270 Ga0451577_0004735 3300042876 Bacteria 14256
271 Ga0466969_0000020 3300044656 Bacteria 101861
272 Ga0466972_0000594 3300044658 Bacteria 17607
273 Ga0466972_0018469 3300044658 Bacteria 3486
274 Ga0466972_0033268 3300044658 Bacteria 2529
275 Ga0466961_0023971 3300044693 Bacteria 3926
276 Ga0453684_0003325 3300044712 Bacteria 36528
277 Ga0466968_0030565 3300044735 Bacteria 2231
278 Ga0466970_0023056 3300044765 Bacteria 3249
279 Ga0466959_0032475 3300045049 Bacteria 3864
280 Ga0451576_0004667 3300045051 Bacteria 17660
281 Ga0495590_0000961 3300046457 Bacteria 12699
282 Ga0495590_0005241 3300046457 Bacteria 5144
283 Ga0495650_0003613 3300046471 Bacteria 11145
284 Ga0495580_0082202 3300046472 Bacteria 2245
285 Ga0495605_0003171 3300046474 Bacteria 9884
286 Ga0495596_0001951 3300046500 Bacteria 11391
287 Ga0495607_0037760 3300046501 Bacteria 2899
288 Ga0495610_0003726 3300046512 Bacteria 11667
289 Ga0495616_0002965 3300046513 Bacteria 11024
290 Ga0495632_0004688 3300046519 Bacteria 9236
291 Ga0495609_0002440 3300046538 Bacteria 11434
292 Ga0495621_0032237 3300046539 Bacteria 1800
293 Ga0495656_0000047 3300046615 Bacteria 59690
294 Ga0495668_0073272 3300046616 Bacteria 1881
295 Ga0495647_0037806 3300046681 Bacteria 1824
296 Ga0495671_0003485 3300046692 Bacteria 9651
297 Ga0495649_0002102 3300046694 Bacteria 14281
298 Ga0495649_0003524 3300046694 Bacteria 10529
299 Ga0495660_0025749 3300046810 Bacteria 3339
300 Ga0495687_002994 3300047443 Bacteria 12768
301 Ga0495687_010315 3300047443 Bacteria 5129
302 Ga0495687_010651 3300047443 Bacteria 5024
303 Ga0495684_0111504 3300047471 Bacteria 2064
304 Ga0496102_0006045 3300048905 Bacteria 10311
305 Ga0496109_0116984 3300048912 Bacteria 2481
306 Ga0496116_0008888 3300048919 Bacteria 8643
307 Ga0496116_0009021 3300048919 Bacteria 8569
308 Ga0496121_0017722 3300048924 Bacteria 7248
309 Ga0496122_0003093 3300048925 Bacteria 22367
310 Ga0496123_0002770 3300048926 Bacteria 20934
311 Ga0496123_0119810 3300048926 Bacteria 1483
312 Ga0496124_0000108 3300048927 Bacteria 167473
313 Ga0496126_0082237 3300048929 Bacteria 2846
314 Ga0501034_0001082 3300049571 Bacteria 38490
315 nmdc:mga03683_1155_c1 3300050489 Bacteria 7757
316 nmdc:mga0k408_1621_c1 3300050493 Bacteria 12161
317 nmdc:mga0k408_7907_c1 3300050493 Bacteria 5694
318 nmdc:mga0k408_80075_c1 3300050493 Bacteria 1912
319 nmdc:mga07m45_56130_c1 3300050496 Bacteria 2226
320 nmdc:mga07m45_62425_c1 3300050496 Bacteria 2112
321 nmdc:mga09592_1397_c1 3300050508 Bacteria 19296
322 Ga0495619_0018505 3300053085 Bacteria 4419
323 Ga0500568_0017429 3300053139 Bacteria 3172
324 Ga0500619_000006 3300053154 Bacteria 77270
325 2513956865 2513237150 Bacteria 6553639
326 2514043391 2513237165 Bacteria 6771773
327 2643865294 2643221570 Bacteria 5103772
328 2643991518 2643221596 Bacteria 5006805
329 2644243444 2643221644 Bacteria 6865017
330 2644292572 2643221652 Bacteria 5140275
331 2842721627 2842718218 Bacteria 4560148
332 2885197134 2885192300 Bacteria 5882526
333 2894024092 2894023352 Bacteria 5167372
334 2904479586 2904479285 Bacteria 5073931
335 2945973613 2945972063 Bacteria 6086495
336 2974322278 2974320154 Bacteria 4571377
337 2990714038 2990710928 Bacteria 5002431
338 644747749 644736347 Bacteria 6476522
339 Ga0105248_10018299
340 JGI25151J46595_10001220
341 JGI25406J46586_10006566
342 Ga0055526_1002549
343 Ga0055526_1002553
344 Ga0055526_1011862
345 Ga0055537_1004055
346 Ga0055524_1000052
347 Ga0055524_1000401
348 Ga0055536_1000365
349 Ga0055534_1001121
350 Ga0055534_1002547
351 Ga0070676_10002126
352 Ga0070676_10009393
353 Ga0070676_10016837
354 Ga0070676_10023155
355 Ga0070676_10024327
356 Ga0070670_100002010
357 Ga0070670_100005359
358 Ga0070670_100039632
359 Ga0068869_100005348
360 Ga0068869_100048670
361 Ga0070666_10000314
362 Ga0068868_100006045
363 Ga0068868_100006540
364 Ga0070661_100005819
365 Ga0070668_100019320
366 Ga0070668_100083815
367 Ga0070669_100010108
368 Ga0070675_100001222
369 Ga0070675_100012953
370 Ga0070671_100003684
371 Ga0070671_100011354
372 Ga0070671_100013127
373 Ga0070671_100076244
374 Ga0070674_100006603
375 Ga0070674_100023605
376 Ga0070674_100044323
377 Ga0070673_100001110
378 Ga0070673_100010776
379 Ga0070673_100022843
380 Ga0070673_100050218
381 Ga0070659_100001278
382 Ga0070667_100001066
383 Ga0070667_100057692
384 Ga0070663_100102238
385 Ga0070678_100003900
386 Ga0070678_100013082
387 Ga0070678_100035956
388 Ga0070678_100041668
389 Ga0070678_100061049
390 Ga0070678_100089897
391 Ga0070662_100029433
392 Ga0070662_100032425
393 Ga0068867_100000415
394 Ga0068867_100000765
395 Ga0068867_100007201
396 Ga0070685_10022240
397 Ga0070706_100007448
398 Ga0068853_100134398
399 Ga0070672_100005783
400 Ga0070672_100006201
401 Ga0070672_100011060
402 Ga0070672_100013371
403 Ga0070672_100108628
404 Ga0068855_100244253
405 Ga0068854_100038458
406 Ga0068854_100052832
407 Ga0070702_100050215
408 Ga0068852_100017319
409 Ga0068852_100030527
410 Ga0068852_100057764
411 Ga0068859_100056089
412 Ga0068864_100001007
413 Ga0068864_100014676
414 Ga0068866_10005869
415 Ga0068861_100000811
416 Ga0068861_100002131
417 Ga0068861_100123659
418 Ga0068863_100005657
419 Ga0068863_100010671
420 Ga0068863_100078816
421 Ga0068858_100001922
422 Ga0068858_100012382
423 Ga0068858_100026113
424 Ga0068860_100002168
425 Ga0068860_100030737
426 Ga0068860_100102070
427 Ga0068862_100003580
428 Ga0081539_10000101
429 Ga0075368_10008396
430 Ga0075367_10014800
431 Ga0075366_10002155
432 Ga0075366_10002865
433 Ga0075366_10005926
434 Ga0075366_10023476
435 Ga0075366_10042299
436 Ga0097621_100151238
437 Ga0075370_10000354
438 Ga0075370_10007613
439 Ga0075370_10008417
440 Ga0068871_100009894
441 Ga0068871_100022166
442 Ga0068871_100080853
443 Ga0075429_100004508
444 Ga0068865_100010850
445 Ga0097620_100056091
446 Ga0099826_10000004
447 Ga0105240_10002152
448 Ga0105243_10151371
449 Ga0105248_10009179
450 Ga0105237_10003697
451 Ga0105237_10166954
452 Ga0105238_10002525
453 Ga0105238_10064761
454 Ga0105249_10072881
455 Ga0105239_10001461
456 Ga0105239_10011857
457 Ga0105239_10027227
458 Ga0157371_10037456
459 Ga0157378_10024287
460 Ga0157378_10025103
461 Ga0163162_10004570
462 Ga0157375_10020048
463 Ga0157375_10076607
464 Ga0163163_10003646
465 Ga0163163_10027752
466 Ga0163163_10049249
467 Ga0157377_10012006
468 Ga0157379_10011850
469 Ga0157379_10016550
470 Ga0157379_10022409
471 Ga0157379_10065243
472 Ga0157376_10075097
473 Ga0183362_10003
474 Ga0163161_10035355
475 Ga0209565_1000066
476 Ga0209675_1000084
477 Ga0209675_1001045
478 Ga0209676_1000014
479 Ga0209025_1000365
480 Ga0209025_1000437
481 Ga0209025_1002968
482 Ga0209564_1000539
483 Ga0209564_1000901
484 Ga0209564_1002826
485 Ga0209256_1000331
486 Ga0209051_1010535
487 Ga0207697_10024688
488 Ga0207682_10009132
489 Ga0207682_10010678
490 Ga0207682_10023282
491 Ga0207642_10011204
492 Ga0207680_10000560
493 Ga0207645_10003759
494 Ga0207645_10006179
495 Ga0207645_10044752
496 Ga0207705_10113062
497 Ga0207684_10003355
498 Ga0207671_10002223
499 Ga0207671_10104547
500 Ga0207662_10002354
501 Ga0207657_10030910
502 Ga0207649_10008564
503 Ga0207681_10006425
504 Ga0207681_10032320
505 Ga0207694_10008493
506 Ga0207650_10000230
507 Ga0207650_10000254
508 Ga0207659_10000455
509 Ga0207659_10027675
510 Ga0207644_10000556
511 Ga0207644_10012853
512 Ga0207644_10015590
513 Ga0207644_10017310
514 Ga0207690_10002003
515 Ga0207706_10005161
516 Ga0207706_10025230
517 Ga0207706_10030428
518 Ga0207706_10077738
519 Ga0207704_10018871
520 Ga0207704_10019861
521 Ga0207691_10005346
522 Ga0207691_10012703
523 Ga0207691_10016079
524 Ga0207691_10037761
525 Ga0207691_10063621
526 Ga0207691_10098411
527 Ga0207711_10004494
528 Ga0207689_10053483
529 Ga0207661_10051595
530 Ga0207651_10001368
531 Ga0207651_10006942
532 Ga0207651_10015360
533 Ga0207651_10030421
534 Ga0207651_10031109
535 Ga0207712_10033766
536 Ga0207658_10001039
537 Ga0207677_10007397
538 Ga0207703_10004604
539 Ga0207703_10008165
540 Ga0207703_10047066
541 Ga0207678_10008923
542 Ga0207678_10019646
543 Ga0207641_10004164
544 Ga0207641_10074853
545 Ga0207641_10140518
546 Ga0207648_10000133
547 Ga0207648_10002064
548 Ga0207648_10014209
549 Ga0207648_10184399
550 Ga0207676_10001015
551 Ga0207676_10015560
552 Ga0207674_10029319
553 Ga0207675_100000103
554 Ga0207675_100001938
555 Ga0207675_100002029
556 Ga0207683_10006621
557 Ga0207683_10014499
558 Ga0207683_10082423
559 Ga0207683_10097313
560 Ga0207683_10111268
561 Ga0207698_10004971
562 Ga0209282_1000035
563 Ga0268265_10003106
564 Ga0268265_10015342
565 Ga0268264_10001565
566 Ga0268264_10015207
567 Ga0268264_10045281
568 Ga0268264_10064731
569 Ga0307517_10064863
570 Ga0307515_10015539
571 Ga0307515_10025981
572 Ga0265316_10000026
573 Ga0307513_10118265
574 Ga0307408_100022347
575 Ga0307514_10001392
576 Ga0307516_10000303
577 Ga0307516_10001192
578 Ga0307405_10002347
579 Ga0307405_10008363
580 Ga0307413_10035429
581 Ga0307410_10000631
582 Ga0307406_10019923
583 Ga0307412_10003892
584 Ga0307409_100000891
585 Ga0307409_100013906
586 Ga0307416_100047180
587 Ga0307415_100009773
588 Ga0373951_0013826
589 Ga0373925_0003071
590 Ga0373925_0011597
591 Ga0395905_0021835
592 Ga0395905_0028847
593 Ga0439436_0009290
594 Ga0439447_009956
595 Ga0439466_0017609
596 Ga0439465_0000146
597 Ga0439431_0000808
598 Ga0439433_0002086
599 Ga0439432_012286
600 Ga0439449_0000957
601 Ga0439449_0002974
602 Ga0439450_012790
603 Ga0439452_001204
604 Ga0450919_000488
605 Ga0439434_0009758
606 Ga0439464_0004510
607 Ga0450918_000743
608 Ga0451577_0004735
609 Ga0466969_0000020
610 Ga0466972_0000594
611 Ga0466972_0018469
612 Ga0466972_0033268
613 Ga0466961_0023971
614 Ga0453684_0003325
615 Ga0466968_0030565
616 Ga0466970_0023056
617 Ga0466959_0032475
618 Ga0451576_0004667
619 Ga0495590_0000961
620 Ga0495590_0005241
621 Ga0495650_0003613
622 Ga0495580_0082202
623 Ga0495605_0003171
624 Ga0495596_0001951
625 Ga0495607_0037760
626 Ga0495610_0003726
627 Ga0495616_0002965
628 Ga0495632_0004688
629 Ga0495609_0002440
630 Ga0495621_0032237
631 Ga0495656_0000047
632 Ga0495668_0073272
633 Ga0495647_0037806
634 Ga0495671_0003485
635 Ga0495649_0002102
636 Ga0495649_0003524
637 Ga0495660_0025749
638 Ga0495687_002994
639 Ga0495687_010315
640 Ga0495687_010651
641 Ga0495684_0111504
642 Ga0496102_0006045
643 Ga0496109_0116984
644 Ga0496116_0008888
645 Ga0496116_0009021
646 Ga0496121_0017722
647 Ga0496122_0003093
648 Ga0496123_0002770
649 Ga0496123_0119810
650 Ga0496124_0000108
651 Ga0496126_0082237
652 Ga0501034_0001082
653 nmdc:mga03683_1155_c1
654 nmdc:mga0k408_1621_c1
655 nmdc:mga0k408_7907_c1
656 nmdc:mga0k408_80075_c1
657 nmdc:mga07m45_56130_c1
658 nmdc:mga07m45_62425_c1
659 nmdc:mga09592_1397_c1
660 Ga0495619_0018505
661 Ga0500568_0017429
662 Ga0500619_000006
663 2513956865
664 2514043391
665 2643865294
666 2643991518
667 2644243444
668 2644292572
669 2842721627
670 2885197134
671 2894024092
672 2904479586
673 2945973613
674 2974322278
675 2990714038
676 644747749

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00342

PGI

Phosphoglucose isomerase

86

558

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7oyl-assembly1.cif.gz_A phosphoglucose isomerase of aspergillus fumigatus in complexed with glucose-6-phosphate 0.972 3 538
1n8t-assembly1.cif.gz_A the crystal structure of phosphoglucose isomerase from rabbit muscle 0.9677 3 536
3hjb-assembly2.cif.gz_D 1.5 angstrom crystal structure of glucose-6-phosphate isomerase from vibrio cholerae. 0.9673 2 538
1iri-assembly2.cif.gz_C crystal structure of human autocrine motility factor complexed with an inhibitor 0.9669 3 536
2o2d-assembly1.cif.gz_A crystal structure of phosphoglucose isomerase from trypanosoma brucei complexed with citrate 0.9666 3 531
ID Description Score Start End Superfamily
af_P34795_296_509_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9658 289 497 3.40.50.10490
af_A8DZE4_100_294_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9658 97 289 3.40.50.10490
2wu8A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9527 3 501 3.40.50.10490
2o2dC02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.952 133 262 3.40.50.10490
af_A8DZE4_100_294_3.40.50.10490 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glucose-6-phosphate isomerase like protein; domain 1 0.9513 97 289 3.40.50.10490
ID Description Score Start End GO Terms
AF-A0A7R9HV50-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.9868 161 357 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-S4W6L9-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.9863 164 340 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-Q9KH85-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.986 125 441 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-A0A2W2CNY5-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.9856 266 508 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367
AF-A0A3C1SUG2-F1-model_v4 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.984 133 356 GO:0004347
GO:0005829
GO:0006094
GO:0006096
GO:0048029
GO:0051156
GO:0097367

Map