F413291

General Info

Members Datasets Scaffolds Average Seq Length
337 214 290 150

Family's Representative Sequence

Representative Sequence 3300053125|Ga0500618_000072|Ga0500618_000072_51069_51599
Length 176
Sequence LRGGILTVPAAAIPGLAKRRMPQAFGSFPMSKTIFILNGPNLNLLGQREPHIYGSTTLDEIRGQCIKVAGDLGFDVDFRQSNFEGELIESVHQARNASCGIIINPAAYTFTSIALLDALKTYDPPKIELHISNVHARESIYHNSLISRVATAIMIGFGADGYGLAIQAMARFVKPR

Samples

Sample ID Description Type Environment
1 2509276021 Rhizobium leguminosarum bv. trifolii WSM597 Isolate Nodule
2 2513237138 Rhizobium favelukesii OR191 Isolate Nodule
3 2517287029 Rhizobium leguminosarum bv. trifolii SRDI565 Isolate Nodule
4 2529292951 Rhizobium sp. CCGE 510 Isolate Nodule
5 2534681796 Rhizobium grahamii CCGE 502 Isolate Nodule
6 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
7 2582581304 Rhizobium sp. YR519 Isolate Rhizosphere
8 2582581867 Rhizobium sp. OV201 Isolate Rhizosphere
9 2585427528 Rhizobium leguminosarum CF307 Isolate Rhizosphere
10 2585427590 Rhizobium sp. CF048 Isolate Rhizosphere
11 2585427593 Rhizobium tropici CF286 Isolate Rhizosphere
12 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
13 2585427634 Neorhizobium galegae bv. orientalis HAMBI 540 Isolate Nodule
14 2643221733 Bosea sp. Root381 Isolate Unclassified
15 2718217927 Rhizobium sp. N324 Isolate Nodule
16 2718218423 Rhizobium sp. N941 Isolate Nodule
17 2721755809 Rhizobium sp. N541 Isolate Nodule
18 2738541333 Rhizobium sophoriradicis CCBAU 03470 Isolate Unclassified
19 2791355267 Rhizobium sp. L18 Isolate Nodule
20 2802429633 Rhizobium anhuiense J3 Isolate Nodule
21 2802429636 Rhizobium anhuiense JX3 Isolate Nodule
22 2802429637 Rhizobium anhuiense C15 Isolate Nodule
23 2818991461 Neorhizobium alkalisoli 1225 Isolate Unclassified
24 2818991467 Bosea vestrisii 3192 Isolate Unclassified
25 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
26 2838736955 Rhizobium cellulosilyticum SEMIA 448 Isolate Nodule
27 2841840854 Rhizobium cellulosilyticum SEMIA 444 Isolate Nodule
28 2841864319 Rhizobium leguminosarum SEMIA 4052 Isolate Nodule
29 2842140634 Rhizobium cellulosilyticum SEMIA 452 Isolate Nodule
30 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
31 2857531043 Neorhizobium sp. R-72160 Isolate Unclassified
32 2891373044 Shinella sp. AETb1-6 Isolate Rhizosphere
33 2917699015 Bosea sp. F3-2 Isolate Rhizosphere
34 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
35 2919450847 Ancylobacter sp. 3268 Isolate Rhizosphere
36 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
37 2929138655 Agrobacterium sp. R-72433 Hybrid assembly Isolate Unclassified
38 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
39 3005409236 Rhizobium sp. P32RR-XVIII Isolate Rhizosphere
40 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
41 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
42 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
43 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
44 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
45 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
46 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
47 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
48 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
49 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
50 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
51 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
52 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
53 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
54 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
55 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
56 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
57 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
58 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
59 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
60 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
61 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
62 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
63 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
64 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
65 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
66 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
67 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
68 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
69 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
70 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
71 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
72 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
73 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
74 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
75 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
76 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
77 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
78 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
79 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
80 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
81 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
82 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
83 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
84 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
85 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
86 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
87 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
88 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
89 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
90 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
91 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
92 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
93 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
94 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
95 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
96 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
97 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
98 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
99 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
100 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
101 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
102 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
103 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
104 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
105 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
106 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
107 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
109 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
110 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
134 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
135 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
136 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
137 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
138 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
139 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
140 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
141 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
142 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
143 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
144 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
145 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
146 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
147 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
148 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
149 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
150 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
151 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
152 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
153 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
154 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
155 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
156 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
157 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
158 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
159 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
160 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
161 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
162 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
163 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
164 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
165 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
166 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
167 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
168 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
173 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
178 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
179 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
180 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
181 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
184 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
185 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
186 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
187 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
188 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
189 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
190 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
191 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
192 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
193 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
194 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
195 3300053105 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 endosphere Metagenome Endosphere
196 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
197 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
198 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
199 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
200 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
201 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
202 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
203 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
204 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
205 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
206 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
207 8001845381 Ancylobacter sonchi VKM B-3145 Isolate Unclassified
208 8005258706 Rhizobium sp. R693 Isolate Nodule
209 8005275841 Rhizobium sp. N4311 Isolate Nodule
210 8005542996 Rhizobium grahamii CCGM3 Isolate Unclassified
211 8005570704 Rhizobium anhuiense bv. trifolii WYCCWR10015 Isolate Nodule
212 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified
213 8056375014 Rhizobium redzepovicii 18T Isolate Nodule
214 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 85.76
Metatranscriptomes 0.3
Isolates 13.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 40.65
Nodule 6.82
Rhizoplane 0.3
Rhizosphere 35.31
Stem 0
Stem Tuber 0
Unclassified 16.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25158J39367_1002033 3300002739 Bacteria 3402
2 JGI25152J39213_1000009 3300002773 Bacteria 138285
3 JGI25152J39213_1008190 3300002773 Bacteria 2619
4 JGI25150J39212_1000016 3300002774 Bacteria 153945
5 JGI25150J39212_1037056 3300002774 Bacteria 644
6 JGI25159J45721_1000115 3300002987 Bacteria 38259
7 JGI25159J45721_1010947 3300002987 Bacteria 2261
8 JGI25151J46595_10000073 3300003187 Bacteria 136684
9 JGI25151J46595_10002825 3300003187 Bacteria 10028
10 JGI25151J46595_10004554 3300003187 Bacteria 7307
11 JGI25151J46595_10005108 3300003187 Bacteria 6818
12 JGI25151J46595_10119156 3300003187 Bacteria 675
13 JGI25153J46596_10000545 3300003215 Bacteria 23503
14 JGI25153J46596_10001146 3300003215 Bacteria 16038
15 JGI25153J46596_10016723 3300003215 Bacteria 2923
16 rootH1_10285516 3300003323 Bacteria 2190
17 JGI25160J50197_1001463 3300003354 Bacteria 11772
18 JGI25160J50197_1007943 3300003354 Bacteria 4086
19 JGI25161J50226_1000067 3300003374 Bacteria 90681
20 JGI25161J50226_1005520 3300003374 Bacteria 2437
21 Ga0055526_1000450 3300003771 Bacteria 32770
22 Ga0055526_1004190 3300003771 Bacteria 8766
23 Ga0055524_1000657 3300003775 Bacteria 24423
24 Ga0055524_1003917 3300003775 Bacteria 7052
25 Ga0055524_1023321 3300003775 Bacteria 1996
26 Ga0055528_1000891 3300003790 Bacteria 20163
27 Ga0055528_1007322 3300003790 Bacteria 4896
28 Ga0055528_1020044 3300003790 Bacteria 2186
29 Ga0055530_10085864 3300003791 Bacteria 653
30 Ga0055540_1000050 3300003792 Bacteria 145565
31 Ga0055540_1010335 3300003792 Bacteria 3117
32 Ga0055540_1026089 3300003792 Bacteria 1419
33 Ga0055540_1051586 3300003792 Bacteria 847
34 Ga0055531_10014760 3300003794 Bacteria 3495
35 Ga0055543_1000399 3300004625 Bacteria 27765
36 Ga0055543_1000831 3300004625 Bacteria 15046
37 Ga0065165_1000393 3300005262 Bacteria 71081
38 Ga0065165_1004649 3300005262 Bacteria 8317
39 Ga0065165_1045059 3300005262 Bacteria 1286
40 Ga0065165_1054763 3300005262 Bacteria 1116
41 Ga0070670_100009738 3300005331 Bacteria 8206
42 Ga0070670_100029693 3300005331 Bacteria 4708
43 Ga0070670_100056615 3300005331 Bacteria 3364
44 Ga0070670_100089390 3300005331 Bacteria 2647
45 Ga0070668_100030493 3300005347 Bacteria 4099
46 Ga0070669_100013647 3300005353 Bacteria 5775
47 Ga0070675_100023614 3300005354 Bacteria 4919
48 Ga0070675_100226211 3300005354 Bacteria 1631
49 Ga0070671_100004013 3300005355 Bacteria 11600
50 Ga0070674_100817477 3300005356 Bacteria 806
51 Ga0070673_100253389 3300005364 Bacteria 1535
52 Ga0070659_100877115 3300005366 Bacteria 783
53 Ga0070713_100446738 3300005436 Bacteria 1214
54 Ga0070662_100059210 3300005457 Bacteria 2790
55 Ga0068867_100206535 3300005459 Bacteria 1575
56 Ga0070672_100000651 3300005543 Bacteria 20295
57 Ga0070665_100129106 3300005548 Bacteria 2530
58 Ga0068856_100474695 3300005614 Bacteria 1271
59 Ga0068864_100014385 3300005618 Bacteria 6571
60 Ga0068864_100191309 3300005618 Bacteria 1876
61 Ga0068864_100669386 3300005618 Unclassified 1012
62 Ga0068861_100034368 3300005719 Bacteria 3749
63 Ga0068870_10336563 3300005840 Bacteria 964
64 Ga0068863_100010812 3300005841 Bacteria 8850
65 Ga0068863_100744088 3300005841 Unclassified 976
66 Ga0068862_100319557 3300005844 Bacteria 1432
67 Ga0068862_101184677 3300005844 Bacteria 762
68 Ga0081540_1000433 3300005983 Bacteria 41246
69 Ga0075365_10147350 3300006038 Bacteria 1636
70 Ga0075365_10158223 3300006038 Bacteria 1577
71 Ga0075365_10316666 3300006038 Bacteria 1099
72 Ga0075368_10116628 3300006042 Bacteria 1104
73 Ga0075363_100061022 3300006048 Bacteria 2031
74 Ga0075364_10000976 3300006051 Bacteria 15090
75 Ga0075364_10127538 3300006051 Bacteria 1706
76 Ga0070716_100056515 3300006173 Bacteria 2251
77 Ga0070712_100159773 3300006175 Bacteria 1739
78 Ga0075362_10004629 3300006177 Bacteria 4960
79 Ga0075367_10012195 3300006178 Bacteria 4572
80 Ga0075367_10280808 3300006178 Bacteria 1047
81 Ga0075369_10049428 3300006186 Bacteria 1817
82 Ga0075369_10094055 3300006186 Bacteria 1339
83 Ga0075369_10262386 3300006186 Bacteria 803
84 Ga0075369_10311141 3300006186 Bacteria 736
85 Ga0075366_10070058 3300006195 Bacteria 2088
86 Ga0075366_10749026 3300006195 Bacteria 607
87 Ga0097621_100745917 3300006237 Bacteria 904
88 Ga0075370_10001098 3300006353 Bacteria 11295
89 Ga0075370_10064819 3300006353 Bacteria 2084
90 Ga0105249_11018896 3300009553 Bacteria 897
91 Ga0157374_10131776 3300013296 Bacteria 2420
92 Ga0157375_10017897 3300013308 Bacteria 6409
93 Ga0163163_10004624 3300014325 Bacteria 11756
94 Ga0163163_10933984 3300014325 Bacteria 931
95 Ga0157376_10056125 3300014969 Bacteria 3289
96 Ga0157376_10897998 3300014969 Bacteria 904
97 Ga0163161_10176127 3300017792 Bacteria 1637
98 Ga0213875_10002492 3300021388 Bacteria 10999
99 Ga0213875_10103412 3300021388 Bacteria 1329
100 Ga0224712_10129489 3300022467 Bacteria 1101
101 Ga0209436_100019 3300025208 Bacteria 112688
102 Ga0207425_1000054 3300025245 Bacteria 153997
103 Ga0207425_1003277 3300025245 Bacteria 5268
104 Ga0207425_1024070 3300025245 Bacteria 1268
105 Ga0209129_1000108 3300025258 Bacteria 153997
106 Ga0209129_1001016 3300025258 Bacteria 16716
107 Ga0209129_1007552 3300025258 Bacteria 3209
108 Ga0209129_1047964 3300025258 Bacteria 658
109 Ga0209673_1000291 3300025273 Bacteria 93803
110 Ga0209673_1000738 3300025273 Bacteria 45021
111 Ga0209673_1002286 3300025273 Bacteria 13688
112 Ga0209130_1000061 3300025284 Bacteria 200990
113 Ga0209130_1000066 3300025284 Bacteria 192626
114 Ga0209675_1039701 3300025291 Bacteria 1040
115 Ga0209676_1009156 3300025292 Bacteria 4308
116 Ga0209676_1062950 3300025292 Bacteria 914
117 Ga0209676_1066107 3300025292 Bacteria 878
118 Ga0209676_1112525 3300025292 Bacteria 560
119 Ga0209025_1000044 3300025294 Bacteria 349480
120 Ga0209025_1000189 3300025294 Bacteria 153997
121 Ga0209025_1000430 3300025294 Bacteria 83230
122 Ga0209025_1004043 3300025294 Bacteria 13130
123 Ga0209564_1000520 3300025295 Bacteria 62968
124 Ga0209564_1000992 3300025295 Bacteria 35457
125 Ga0209758_1000162 3300025297 Bacteria 153997
126 Ga0209758_1000490 3300025297 Bacteria 64714
127 Ga0209758_1002174 3300025297 Bacteria 20609
128 Ga0209758_1004430 3300025297 Bacteria 11698
129 Ga0209758_1010291 3300025297 Bacteria 5624
130 Ga0209758_1068561 3300025297 Bacteria 1128
131 Ga0209050_1005336 3300025298 Bacteria 8140
132 Ga0209256_1000128 3300025299 Bacteria 163833
133 Ga0209256_1001383 3300025299 Bacteria 25355
134 Ga0209256_1014286 3300025299 Bacteria 2868
135 Ga0209256_1042639 3300025299 Bacteria 1144
136 Ga0209256_1074802 3300025299 Bacteria 753
137 Ga0207426_1000008 3300025302 Bacteria 848730
138 Ga0207426_1000075 3300025302 Bacteria 321337
139 Ga0207426_1027685 3300025302 Bacteria 1885
140 Ga0209051_1000249 3300025303 Bacteria 90988
141 Ga0209051_1002133 3300025303 Bacteria 14736
142 Ga0209051_1004236 3300025303 Bacteria 8942
143 Ga0209051_1046995 3300025303 Bacteria 1479
144 Ga0209257_1031877 3300025304 Bacteria 1679
145 Ga0209257_1046456 3300025304 Bacteria 1254
146 Ga0209257_1057736 3300025304 Bacteria 1066
147 Ga0207681_10019891 3300025923 Bacteria 4251
148 Ga0207650_10011786 3300025925 Bacteria 6027
149 Ga0207650_10043460 3300025925 Bacteria 3298
150 Ga0207650_10100714 3300025925 Bacteria 2223
151 Ga0207659_10068221 3300025926 Bacteria 2586
152 Ga0207700_10364311 3300025928 Bacteria 1261
153 Ga0207644_11070378 3300025931 Unclassified 677
154 Ga0207665_10072941 3300025939 Bacteria 2346
155 Ga0207691_10002236 3300025940 Bacteria 18957
156 Ga0207679_10064820 3300025945 Bacteria 2732
157 Ga0207668_10014935 3300025972 Bacteria 4816
158 Ga0207658_10479562 3300025986 Bacteria 1105
159 Ga0207677_11380807 3300026023 Bacteria 648
160 Ga0207708_10095275 3300026075 Bacteria 2299
161 Ga0207702_10185153 3300026078 Bacteria 1920
162 Ga0207641_10013884 3300026088 Bacteria 6606
163 Ga0207641_10475822 3300026088 Bacteria 1210
164 Ga0207648_10234552 3300026089 Bacteria 1633
165 Ga0207676_10016696 3300026095 Bacteria 5317
166 Ga0207676_10098923 3300026095 Bacteria 2413
167 Ga0207676_10165616 3300026095 Bacteria 1920
168 Ga0207675_100050344 3300026118 Bacteria 3887
169 Ga0207698_10736827 3300026142 Bacteria 983
170 Ga0268266_10637438 3300028379 Bacteria 1025
171 Ga0268265_10028738 3300028380 Bacteria 3985
172 Ga0268265_10965510 3300028380 Bacteria 840
173 Ga0268264_10026116 3300028381 Bacteria 4770
174 Ga0307406_10307141 3300031901 Bacteria 1221
175 Ga0307412_10063448 3300031911 Bacteria 2492
176 Ga0436364_0571203 3300037853 Bacteria 708
177 Ga0436364_0780058 3300037853 Bacteria 25161
178 Ga0436364_0788237 3300037853 Bacteria 24655
179 Ga0436364_0872542 3300037853 Bacteria 6827
180 Ga0237819_19513 3300038705 Bacteria 719
181 Ga0436365_0517305 3300039437 Bacteria 553
182 Ga0436360_0086332 3300039438 Bacteria 1567
183 Ga0436361_0959883 3300039447 Bacteria 3673
184 Ga0436363_0572005 3300039450 Bacteria 767
185 Ga0436363_1007913 3300039450 Bacteria 1408
186 Ga0436362_1286931 3300039453 Bacteria 1511
187 Ga0439465_0052736 3300041413 Bacteria 1335
188 Ga0439465_0090790 3300041413 Bacteria 1045
189 Ga0451853_1318595 3300041512 Bacteria 954
190 Ga0439435_0249641 3300042436 Bacteria 597
191 Ga0495617_187601 3300046452 Bacteria 649
192 Ga0495638_0000220 3300046460 Bacteria 79594
193 Ga0495638_0016008 3300046460 Bacteria 5026
194 Ga0495605_0007389 3300046474 Bacteria 6237
195 Ga0495584_0209097 3300046491 Bacteria 992
196 Ga0495584_0605112 3300046491 Unclassified 559
197 Ga0495596_0242694 3300046500 Bacteria 699
198 Ga0495607_0019207 3300046501 Bacteria 4344
199 Ga0495583_0033217 3300046506 Bacteria 2482
200 Ga0495610_0157328 3300046512 Bacteria 964
201 Ga0495616_0147606 3300046513 Bacteria 1066
202 Ga0495620_0069891 3300046515 Bacteria 1439
203 Ga0495620_0141060 3300046515 Bacteria 942
204 Ga0495631_0002135 3300046518 Bacteria 11444
205 Ga0495632_0000416 3300046519 Bacteria 40411
206 Ga0495632_0098434 3300046519 Bacteria 1380
207 Ga0495643_0069239 3300046522 Bacteria 1855
208 Ga0495654_0081127 3300046530 Bacteria 1521
209 Ga0495654_0367547 3300046530 Bacteria 576
210 Ga0495609_0087293 3300046538 Bacteria 1359
211 Ga0495668_0254943 3300046616 Bacteria 960
212 Ga0495611_0073301 3300046648 Bacteria 1567
213 Ga0495625_0001563 3300046660 Bacteria 27247
214 Ga0495625_0112588 3300046660 Bacteria 1859
215 Ga0495671_0161396 3300046692 Bacteria 1090
216 Ga0495636_0009244 3300047318 Bacteria 3881
217 Ga0495672_0005345 3300047320 Bacteria 10217
218 Ga0495626_0075542 3300048091 Bacteria 1506
219 Ga0496112_0931650 3300048915 Bacteria 790
220 Ga0496116_0011707 3300048919 Bacteria 7229
221 Ga0496116_0094406 3300048919 Bacteria 1808
222 Ga0496116_0164914 3300048919 Bacteria 1209
223 Ga0496117_0000434 3300048920 Bacteria 69571
224 Ga0496117_0017607 3300048920 Bacteria 5961
225 Ga0496117_0064749 3300048920 Bacteria 2490
226 Ga0496118_0016193 3300048921 Bacteria 6853
227 Ga0496118_0032282 3300048921 Bacteria 4318
228 Ga0496119_0139074 3300048922 Bacteria 1313
229 Ga0496120_0024362 3300048923 Bacteria 3775
230 Ga0496121_0000174 3300048924 Bacteria 143186
231 Ga0496121_0002071 3300048924 Bacteria 31756
232 Ga0496121_0843213 3300048924 Bacteria 534
233 Ga0496121_0872179 3300048924 Bacteria 521
234 Ga0496122_0001470 3300048925 Bacteria 37937
235 Ga0496122_0107987 3300048925 Bacteria 1837
236 Ga0496122_0184304 3300048925 Bacteria 1240
237 Ga0496123_0000018 3300048926 Bacteria 404553
238 Ga0496123_0000022 3300048926 Bacteria 361832
239 Ga0496123_0013579 3300048926 Bacteria 6820
240 Ga0496123_0033008 3300048926 Bacteria 3733
241 Ga0496123_0039205 3300048926 Bacteria 3316
242 Ga0496124_0000094 3300048927 Bacteria 189147
243 Ga0496124_0000200 3300048927 Bacteria 117910
244 Ga0496124_0003927 3300048927 Bacteria 17758
245 Ga0496125_0000215 3300048928 Bacteria 118487
246 Ga0496125_0000982 3300048928 Bacteria 44569
247 Ga0496125_0053921 3300048928 Bacteria 3291
248 Ga0496125_0554436 3300048928 Bacteria 636
249 Ga0496126_0096811 3300048929 Bacteria 2587
250 Ga0496126_0195592 3300048929 Bacteria 1710
251 Ga0496126_1188239 3300048929 Bacteria 561
252 Ga0495678_015414 3300049459 Bacteria 3517
253 Ga0495682_0025366 3300049460 Bacteria 2207
254 Ga0501034_0096810 3300049571 Bacteria 2947
255 Ga0501037_0031525 3300049573 Bacteria 3914
256 Ga0501038_0377125 3300049574 Bacteria 1101
257 nmdc:mga03683_491410_c1 3300050489 Bacteria 594
258 nmdc:mga03n38_157149_c1 3300050490 Bacteria 1149
259 nmdc:mga03n38_44741_c1 3300050490 Bacteria 1946
260 nmdc:mga00v17_31815_c2 3300050491 Bacteria 2605
261 nmdc:mga0yw44_3648_c1 3300050492 Bacteria 1604
262 nmdc:mga0yw44_66334_c1 3300050492 Bacteria 2227
263 nmdc:mga0k408_195475_c1 3300050493 Bacteria 1207
264 nmdc:mga0k408_45896_c1 3300050493 Bacteria 2522
265 nmdc:mga06z11_169470_c1 3300050494 Bacteria 1253
266 nmdc:mga06z11_52321_c1 3300050494 Bacteria 2094
267 nmdc:mga04h51_66941_c1 3300050495 Bacteria 1245
268 nmdc:mga07m45_17428_c1 3300050496 Bacteria 3156
269 nmdc:mga0sz30_103387_c1 3300050516 Bacteria 1245
270 nmdc:mga0sz30_15981_c1 3300050516 Bacteria 2972
271 nmdc:mga0sz30_20577_c1 3300050516 Bacteria 2662
272 nmdc:mga0sz30_283237_c1 3300050516 Bacteria 738
273 Ga0500610_0012638 3300053079 Bacteria 3898
274 Ga0500644_0039626 3300053088 Bacteria 1554
275 Ga0500557_000958 3300053105 Bacteria 4326
276 Ga0500594_0001384 3300053118 Bacteria 5262
277 Ga0500618_000072 3300053125 Bacteria 83424
278 Ga0500618_002852 3300053125 Bacteria 6201
279 Ga0500642_0206450 3300053130 Bacteria 913
280 Ga0500655_060049 3300053133 Bacteria 765
281 Ga0500568_0000227 3300053139 Bacteria 48279
282 Ga0500568_0111232 3300053139 Bacteria 1024
283 Ga0500568_0150342 3300053139 Bacteria 862
284 Ga0500573_0003267 3300053140 Bacteria 8357
285 Ga0500573_0006740 3300053140 Bacteria 6231
286 Ga0500588_0053394 3300053146 Bacteria 1269
287 Ga0500616_0004505 3300053153 Bacteria 9892
288 Ga0500622_0002549 3300053156 Bacteria 13052
289 Ga0500627_0060870 3300053158 Bacteria 1661
290 Ga0500599_055910 3300053736 Bacteria 634

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046460 Ga0495638_0016008 Ga0495638_0016008_1852_2298 143
2 3300053088 Ga0500644_0039626 Ga0500644_0039626_387_833 143
3 3300053156 Ga0500622_0002549 Ga0500622_0002549_6064_6510 143
4 iso_pu_bacteria 2513237138 2513869998 143
5 iso_pu_bacteria 2517287029 2517410726 143
6 iso_pu_bacteria 2582581299 2585233227 143
7 iso_pu_bacteria 2582581867 2585401823 143
8 iso_pu_bacteria 2585427528 2585542430 143
9 iso_pu_bacteria 2585427590 2585820211 143
10 iso_pu_bacteria 2585427593 2585841902 143
11 iso_pu_bacteria 2585427634 2586004372 143
12 iso_pu_bacteria 2643221733 2644728933 143
13 iso_pu_bacteria 2738541333 2739038440 143
14 iso_pu_bacteria 2802429633 2806048776 143
15 iso_pu_bacteria 2802429636 2806070230 143
16 iso_pu_bacteria 2802429637 2806077216 143
17 iso_pu_bacteria 2818991467 2819721081 143
18 iso_pu_bacteria 2821123053 2821128953 143
19 iso_pu_bacteria 2838736955 2838742268 143
20 iso_pu_bacteria 2841840854 2841846124 143
21 iso_pu_bacteria 2842140634 2842145828 143
22 iso_pu_bacteria 2857531043 2857536390 143
23 iso_pu_bacteria 2891373044 2891376674 143
24 iso_pu_bacteria 2919171160 2919176155 143
25 iso_pu_bacteria 2919450847 2919455089 143
26 iso_pu_bacteria 2923556063 2923562060 143
27 iso_pu_bacteria 2929138655 2929143778 143
28 iso_pu_bacteria 3005409236 3005413722 143
29 iso_pu_bacteria 8001845381 8001847059 143
30 iso_pu_bacteria 8005258706 8005258990 143
31 iso_pu_bacteria 8005570704 8005572541 143
32 iso_pu_bacteria 8057529695 8057533787 143
33 3300039453 Ga0436362_1286931 Ga0436362_1286931_77_511 144
34 3300041413 Ga0439465_0090790 Ga0439465_0090790_531_965 144
35 3300042436 Ga0439435_0249641 Ga0439435_0249641_128_562 144
36 3300046500 Ga0495596_0242694 Ga0495596_0242694_252_686 144
37 iso_pu_bacteria 2582581304 2585255823 144
38 iso_pu_bacteria 2585427594 2585847631 144
39 3300005614 Ga0068856_100474695 Ga0068856_1004746952 145
40 3300021388 Ga0213875_10002492 Ga0213875_1000249211 145
41 3300021388 Ga0213875_10103412 Ga0213875_101034121 145
42 3300026078 Ga0207702_10185153 Ga0207702_101851533 145
43 3300037853 Ga0436364_0780058 Ga0436364_0780058_15832_16269 145
44 3300037853 Ga0436364_0788237 Ga0436364_0788237_14217_14654 145
45 3300037853 Ga0436364_0872542 Ga0436364_0872542_145_582 145
46 3300039450 Ga0436363_0572005 Ga0436363_0572005_188_625 145
47 3300046491 Ga0495584_0605112 Ga0495584_0605112_59_526 145
48 iso_pu_bacteria 2529292951 2530644391 145
49 iso_pu_bacteria 2718217927 2719388315 145
50 iso_pu_bacteria 2718218423 2721402938 145
51 iso_pu_bacteria 2721755809 2724035295 145
52 iso_pu_bacteria 2841864319 2841869648 145
53 iso_pu_bacteria 2842395702 2842396766 145
54 iso_pu_bacteria 8005275841 8005277031 145
55 iso_pu_bacteria 8005695170 8005696948 145
56 iso_pu_bacteria 8056375014 8056375290 145
57 3300002987 JGI25159J45721_1010947 JGI25159J45721_10109471 146
58 3300003187 JGI25151J46595_10119156 JGI25151J46595_101191561 146
59 3300005262 Ga0065165_1000393 Ga0065165_10003931 146
60 3300006038 Ga0075365_10316666 Ga0075365_103166662 146
61 3300006186 Ga0075369_10049428 Ga0075369_100494283 146
62 3300006186 Ga0075369_10311141 Ga0075369_103111412 146
63 3300006195 Ga0075366_10749026 Ga0075366_107490261 146
64 3300025284 Ga0209130_1000061 Ga0209130_10000612 146
65 3300025294 Ga0209025_1004043 Ga0209025_100404313 146
66 3300025299 Ga0209256_1042639 Ga0209256_10426392 146
67 3300025302 Ga0207426_1027685 Ga0207426_10276853 146
68 3300039437 Ga0436365_0517305 Ga0436365_0517305_81_521 146
69 3300039438 Ga0436360_0086332 Ga0436360_0086332_37_477 146
70 3300050516 nmdc:mga0sz30_20577_c1 nmdc:mga0sz30_20577_c1_241_702 146
71 3300050516 nmdc:mga0sz30_283237_c1 nmdc:mga0sz30_283237_c1_184_636 146
72 iso_pu_bacteria 2534681796 2535519929 146
73 iso_pu_bacteria 2818991461 2819686897 146
74 iso_pu_bacteria 2917699015 2917699726 146
75 iso_pu_bacteria 3003665799 3003671992 146
76 iso_pu_bacteria 8005542996 8005547655 146
77 3300002774 JGI25150J39212_1037056 JGI25150J39212_10370561 147
78 3300003187 JGI25151J46595_10002825 JGI25151J46595_100028255 147
79 3300003187 JGI25151J46595_10004554 JGI25151J46595_100045547 147
80 3300003187 JGI25151J46595_10005108 JGI25151J46595_100051084 147
81 3300003215 JGI25153J46596_10000545 JGI25153J46596_100005456 147
82 3300003323 rootH1_10285516 rootH1_102855163 147
83 3300003354 JGI25160J50197_1001463 JGI25160J50197_100146311 147
84 3300003374 JGI25161J50226_1005520 JGI25161J50226_10055203 147
85 3300003771 Ga0055526_1000450 Ga0055526_10004508 147
86 3300003775 Ga0055524_1000657 Ga0055524_100065719 147
87 3300003775 Ga0055524_1023321 Ga0055524_10233213 147
88 3300003790 Ga0055528_1000891 Ga0055528_100089116 147
89 3300003792 Ga0055540_1026089 Ga0055540_10260892 147
90 3300003792 Ga0055540_1051586 Ga0055540_10515861 147
91 3300003794 Ga0055531_10014760 Ga0055531_100147604 147
92 3300004625 Ga0055543_1000831 Ga0055543_100083111 147
93 3300005262 Ga0065165_1004649 Ga0065165_10046493 147
94 3300005262 Ga0065165_1045059 Ga0065165_10450591 147
95 3300005331 Ga0070670_100009738 Ga0070670_1000097389 147
96 3300005331 Ga0070670_100056615 Ga0070670_1000566152 147
97 3300005331 Ga0070670_100089390 Ga0070670_1000893901 147
98 3300005347 Ga0070668_100030493 Ga0070668_1000304932 147
99 3300005353 Ga0070669_100013647 Ga0070669_1000136473 147
100 3300005354 Ga0070675_100023614 Ga0070675_1000236143 147
101 3300005356 Ga0070674_100817477 Ga0070674_1008174772 147
102 3300005364 Ga0070673_100253389 Ga0070673_1002533892 147
103 3300005366 Ga0070659_100877115 Ga0070659_1008771151 147
104 3300005457 Ga0070662_100059210 Ga0070662_1000592101 147
105 3300005459 Ga0068867_100206535 Ga0068867_1002065351 147
106 3300005543 Ga0070672_100000651 Ga0070672_10000065121 147
107 3300005548 Ga0070665_100129106 Ga0070665_1001291063 147
108 3300005618 Ga0068864_100014385 Ga0068864_1000143852 147
109 3300005618 Ga0068864_100191309 Ga0068864_1001913092 147
110 3300005719 Ga0068861_100034368 Ga0068861_1000343684 147
111 3300005840 Ga0068870_10336563 Ga0068870_103365632 147
112 3300005841 Ga0068863_100010812 Ga0068863_1000108122 147
113 3300005844 Ga0068862_100319557 Ga0068862_1003195572 147
114 3300005844 Ga0068862_101184677 Ga0068862_1011846771 147
115 3300006038 Ga0075365_10158223 Ga0075365_101582232 147
116 3300006042 Ga0075368_10116628 Ga0075368_101166282 147
117 3300006048 Ga0075363_100061022 Ga0075363_1000610222 147
118 3300006051 Ga0075364_10000976 Ga0075364_1000097611 147
119 3300006051 Ga0075364_10127538 Ga0075364_101275382 147
120 3300006177 Ga0075362_10004629 Ga0075362_100046292 147
121 3300006178 Ga0075367_10012195 Ga0075367_100121951 147
122 3300006186 Ga0075369_10094055 Ga0075369_100940552 147
123 3300006237 Ga0097621_100745917 Ga0097621_1007459171 147
124 3300006353 Ga0075370_10001098 Ga0075370_100010987 147
125 3300009553 Ga0105249_11018896 Ga0105249_110188962 147
126 3300013296 Ga0157374_10131776 Ga0157374_101317762 147
127 3300013308 Ga0157375_10017897 Ga0157375_100178975 147
128 3300014325 Ga0163163_10004624 Ga0163163_100046247 147
129 3300014325 Ga0163163_10933984 Ga0163163_109339842 147
130 3300014969 Ga0157376_10056125 Ga0157376_100561252 147
131 3300014969 Ga0157376_10897998 Ga0157376_108979982 147
132 3300017792 Ga0163161_10176127 Ga0163161_101761272 147
133 3300025245 Ga0207425_1003277 Ga0207425_10032772 147
134 3300025258 Ga0209129_1001016 Ga0209129_10010168 147
135 3300025273 Ga0209673_1000291 Ga0209673_10002918 147
136 3300025291 Ga0209675_1039701 Ga0209675_10397012 147
137 3300025292 Ga0209676_1009156 Ga0209676_10091566 147
138 3300025292 Ga0209676_1066107 Ga0209676_10661072 147
139 3300025294 Ga0209025_1000044 Ga0209025_1000044108 147
140 3300025294 Ga0209025_1000430 Ga0209025_100043072 147
141 3300025295 Ga0209564_1000992 Ga0209564_10009928 147
142 3300025297 Ga0209758_1000490 Ga0209758_100049055 147
143 3300025297 Ga0209758_1002174 Ga0209758_10021741 147
144 3300025297 Ga0209758_1068561 Ga0209758_10685612 147
145 3300025299 Ga0209256_1000128 Ga0209256_100012864 147
146 3300025299 Ga0209256_1001383 Ga0209256_100138319 147
147 3300025302 Ga0207426_1000075 Ga0207426_1000075285 147
148 3300025303 Ga0209051_1002133 Ga0209051_10021338 147
149 3300025303 Ga0209051_1046995 Ga0209051_10469952 147
150 3300025304 Ga0209257_1031877 Ga0209257_10318772 147
151 3300025923 Ga0207681_10019891 Ga0207681_100198912 147
152 3300025925 Ga0207650_10011786 Ga0207650_100117862 147
153 3300025925 Ga0207650_10100714 Ga0207650_101007143 147
154 3300025926 Ga0207659_10068221 Ga0207659_100682213 147
155 3300025940 Ga0207691_10002236 Ga0207691_100022363 147
156 3300025945 Ga0207679_10064820 Ga0207679_100648202 147
157 3300025972 Ga0207668_10014935 Ga0207668_100149353 147
158 3300025986 Ga0207658_10479562 Ga0207658_104795622 147
159 3300026088 Ga0207641_10013884 Ga0207641_100138844 147
160 3300026089 Ga0207648_10234552 Ga0207648_102345521 147
161 3300026095 Ga0207676_10016696 Ga0207676_100166963 147
162 3300026095 Ga0207676_10165616 Ga0207676_101656162 147
163 3300026118 Ga0207675_100050344 Ga0207675_1000503444 147
164 3300026142 Ga0207698_10736827 Ga0207698_107368272 147
165 3300028379 Ga0268266_10637438 Ga0268266_106374381 147
166 3300028380 Ga0268265_10028738 Ga0268265_100287382 147
167 3300028380 Ga0268265_10965510 Ga0268265_109655101 147
168 3300028381 Ga0268264_10026116 Ga0268264_100261163 147
169 3300031901 Ga0307406_10307141 Ga0307406_103071412 147
170 3300038705 Ga0237819_19513 Ga0237819_19513_76_519 147
171 3300046513 Ga0495616_0147606 Ga0495616_0147606_264_707 147
172 3300046515 Ga0495620_0141060 Ga0495620_0141060_179_622 147
173 3300046519 Ga0495632_0000416 Ga0495632_0000416_32099_32542 147
174 3300046660 Ga0495625_0112588 Ga0495625_0112588_525_968 147
175 3300048919 Ga0496116_0164914 Ga0496116_0164914_90_533 147
176 3300048920 Ga0496117_0000434 Ga0496117_0000434_33916_34365 147
177 3300048920 Ga0496117_0064749 Ga0496117_0064749_904_1347 147
178 3300048921 Ga0496118_0032282 Ga0496118_0032282_1497_1940 147
179 3300048922 Ga0496119_0139074 Ga0496119_0139074_731_1174 147
180 3300048923 Ga0496120_0024362 Ga0496120_0024362_1106_1549 147
181 3300048924 Ga0496121_0000174 Ga0496121_0000174_117948_118391 147
182 3300048924 Ga0496121_0002071 Ga0496121_0002071_13212_13709 147
183 3300048925 Ga0496122_0001470 Ga0496122_0001470_23742_24191 147
184 3300048925 Ga0496122_0184304 Ga0496122_0184304_305_757 147
185 3300048926 Ga0496123_0000018 Ga0496123_0000018_339036_339485 147
186 3300048926 Ga0496123_0033008 Ga0496123_0033008_305_757 147
187 3300048926 Ga0496123_0039205 Ga0496123_0039205_2027_2470 147
188 3300048927 Ga0496124_0000094 Ga0496124_0000094_156489_156932 147
189 3300048927 Ga0496124_0003927 Ga0496124_0003927_5063_5506 147
190 3300048928 Ga0496125_0000215 Ga0496125_0000215_116177_116620 147
191 3300048928 Ga0496125_0000982 Ga0496125_0000982_2958_3401 147
192 3300048929 Ga0496126_1188239 Ga0496126_1188239_14_457 147
193 3300049571 Ga0501034_0096810 Ga0501034_0096810_2349_2792 147
194 3300049573 Ga0501037_0031525 Ga0501037_0031525_3090_3533 147
195 3300049574 Ga0501038_0377125 Ga0501038_0377125_290_733 147
196 3300050489 nmdc:mga03683_491410_c1 nmdc:mga03683_491410_c1_122_565 147
197 3300050490 nmdc:mga03n38_157149_c1 nmdc:mga03n38_157149_c1_139_582 147
198 3300050491 nmdc:mga00v17_31815_c2 nmdc:mga00v17_31815_c2_1591_2034 147
199 3300050492 nmdc:mga0yw44_3648_c1 nmdc:mga0yw44_3648_c1_435_938 147
200 3300050493 nmdc:mga0k408_45896_c1 nmdc:mga0k408_45896_c1_2050_2493 147
201 3300050494 nmdc:mga06z11_169470_c1 nmdc:mga06z11_169470_c1_30_473 147
202 3300050495 nmdc:mga04h51_66941_c1 nmdc:mga04h51_66941_c1_378_821 147
203 3300050516 nmdc:mga0sz30_15981_c1 nmdc:mga0sz30_15981_c1_2030_2473 147
204 3300053125 Ga0500618_000072 Ga0500618_000072_51069_51599 147
205 3300053139 Ga0500568_0111232 Ga0500568_0111232_177_620 147
206 3300053139 Ga0500568_0150342 Ga0500568_0150342_89_532 147
207 3300053140 Ga0500573_0003267 Ga0500573_0003267_1220_1663 147
208 3300053140 Ga0500573_0006740 Ga0500573_0006740_409_852 147
209 3300002773 JGI25152J39213_1000009 JGI25152J39213_1000009105 148
210 3300002774 JGI25150J39212_1000016 JGI25150J39212_100001630 148
211 3300003187 JGI25151J46595_10000073 JGI25151J46595_10000073104 148
212 3300003215 JGI25153J46596_10001146 JGI25153J46596_100011463 148
213 3300005331 Ga0070670_100029693 Ga0070670_1000296932 148
214 3300005354 Ga0070675_100226211 Ga0070675_1002262111 148
215 3300005355 Ga0070671_100004013 Ga0070671_10000401312 148
216 3300005618 Ga0068864_100669386 Ga0068864_1006693862 148
217 3300005841 Ga0068863_100744088 Ga0068863_1007440882 148
218 3300006186 Ga0075369_10262386 Ga0075369_102623862 148
219 3300025245 Ga0207425_1000054 Ga0207425_100005431 148
220 3300025258 Ga0209129_1000108 Ga0209129_100010831 148
221 3300025292 Ga0209676_1112525 Ga0209676_11125251 148
222 3300025294 Ga0209025_1000189 Ga0209025_100018931 148
223 3300025297 Ga0209758_1000162 Ga0209758_1000162123 148
224 3300025925 Ga0207650_10043460 Ga0207650_100434602 148
225 3300025931 Ga0207644_11070378 Ga0207644_110703781 148
226 3300026023 Ga0207677_11380807 Ga0207677_113808071 148
227 3300026088 Ga0207641_10475822 Ga0207641_104758222 148
228 3300026095 Ga0207676_10098923 Ga0207676_100989232 148
229 3300031911 Ga0307412_10063448 Ga0307412_100634482 148
230 3300048919 Ga0496116_0011707 Ga0496116_0011707_5435_5884 148
231 3300048919 Ga0496116_0094406 Ga0496116_0094406_43_492 148
232 3300048920 Ga0496117_0017607 Ga0496117_0017607_4677_5126 148
233 3300048921 Ga0496118_0016193 Ga0496118_0016193_3123_3572 148
234 3300048924 Ga0496121_0843213 Ga0496121_0843213_58_507 148
235 3300048925 Ga0496122_0107987 Ga0496122_0107987_1367_1816 148
236 3300048926 Ga0496123_0013579 Ga0496123_0013579_3392_3841 148
237 3300048927 Ga0496124_0000200 Ga0496124_0000200_26196_26645 148
238 3300048928 Ga0496125_0053921 Ga0496125_0053921_14_463 148
239 3300048928 Ga0496125_0554436 Ga0496125_0554436_94_561 148
240 3300048929 Ga0496126_0096811 Ga0496126_0096811_2090_2557 148
241 3300050492 nmdc:mga0yw44_66334_c1 nmdc:mga0yw44_66334_c1_676_1155 148
242 3300050516 nmdc:mga0sz30_103387_c1 nmdc:mga0sz30_103387_c1_307_774 148
243 3300003790 Ga0055528_1020044 Ga0055528_10200441 149
244 3300003791 Ga0055530_10085864 Ga0055530_100858641 149
245 3300003792 Ga0055540_1000050 Ga0055540_100005028 149
246 3300006178 Ga0075367_10280808 Ga0075367_102808082 149
247 3300006195 Ga0075366_10070058 Ga0075366_100700581 149
248 3300006353 Ga0075370_10064819 Ga0075370_100648192 149
249 3300022467 Ga0224712_10129489 Ga0224712_101294892 149
250 3300025273 Ga0209673_1000738 Ga0209673_100073831 149
251 3300025292 Ga0209676_1062950 Ga0209676_10629501 149
252 3300025298 Ga0209050_1005336 Ga0209050_10053366 149
253 3300025303 Ga0209051_1000249 Ga0209051_100024945 149
254 3300025304 Ga0209257_1046456 Ga0209257_10464562 149
255 3300037853 Ga0436364_0571203 Ga0436364_0571203_244_696 149
256 3300039450 Ga0436363_1007913 Ga0436363_1007913_389_841 149
257 3300041512 Ga0451853_1318595 Ga0451853_1318595_285_734 149
258 3300046452 Ga0495617_187601 Ga0495617_187601_27_482 149
259 3300046460 Ga0495638_0000220 Ga0495638_0000220_31047_31502 149
260 3300046474 Ga0495605_0007389 Ga0495605_0007389_560_1015 149
261 3300046491 Ga0495584_0209097 Ga0495584_0209097_426_881 149
262 3300046506 Ga0495583_0033217 Ga0495583_0033217_1942_2397 149
263 3300046512 Ga0495610_0157328 Ga0495610_0157328_277_732 149
264 3300046515 Ga0495620_0069891 Ga0495620_0069891_205_660 149
265 3300046518 Ga0495631_0002135 Ga0495631_0002135_6252_6707 149
266 3300046530 Ga0495654_0081127 Ga0495654_0081127_118_573 149
267 3300046538 Ga0495609_0087293 Ga0495609_0087293_876_1331 149
268 3300046616 Ga0495668_0254943 Ga0495668_0254943_76_531 149
269 3300046648 Ga0495611_0073301 Ga0495611_0073301_227_682 149
270 3300046660 Ga0495625_0001563 Ga0495625_0001563_1143_1598 149
271 3300046692 Ga0495671_0161396 Ga0495671_0161396_374_829 149
272 3300047318 Ga0495636_0009244 Ga0495636_0009244_1640_2095 149
273 3300047320 Ga0495672_0005345 Ga0495672_0005345_3479_3934 149
274 3300048091 Ga0495626_0075542 Ga0495626_0075542_246_701 149
275 3300048924 Ga0496121_0872179 Ga0496121_0872179_28_480 149
276 3300049459 Ga0495678_015414 Ga0495678_015414_2747_3202 149
277 3300049460 Ga0495682_0025366 Ga0495682_0025366_1294_1749 149
278 3300050490 nmdc:mga03n38_44741_c1 nmdc:mga03n38_44741_c1_750_1229 149
279 3300050493 nmdc:mga0k408_195475_c1 nmdc:mga0k408_195475_c1_485_964 149
280 3300050494 nmdc:mga06z11_52321_c1 nmdc:mga06z11_52321_c1_1094_1573 149
281 3300050496 nmdc:mga07m45_17428_c1 nmdc:mga07m45_17428_c1_2331_2810 149
282 3300053079 Ga0500610_0012638 Ga0500610_0012638_866_1321 149
283 3300053105 Ga0500557_000958 Ga0500557_000958_2071_2526 149
284 3300053118 Ga0500594_0001384 Ga0500594_0001384_982_1437 149
285 3300053130 Ga0500642_0206450 Ga0500642_0206450_227_682 149
286 3300053139 Ga0500568_0000227 Ga0500568_0000227_32363_32818 149
287 3300053146 Ga0500588_0053394 Ga0500588_0053394_370_825 149
288 3300053153 Ga0500616_0004505 Ga0500616_0004505_4361_4816 149
289 3300053158 Ga0500627_0060870 Ga0500627_0060870_350_805 149
290 3300053736 Ga0500599_055910 Ga0500599_055910_77_532 149
291 iso_pu_bacteria 2509276021 2509385849 149
292 iso_pu_bacteria 2791355267 2793366678 149
293 3300002739 JGI25158J39367_1002033 JGI25158J39367_10020334 150
294 3300002773 JGI25152J39213_1008190 JGI25152J39213_10081903 150
295 3300002987 JGI25159J45721_1000115 JGI25159J45721_10001153 150
296 3300003215 JGI25153J46596_10016723 JGI25153J46596_100167233 150
297 3300003354 JGI25160J50197_1007943 JGI25160J50197_10079437 150
298 3300003374 JGI25161J50226_1000067 JGI25161J50226_100006752 150
299 3300003771 Ga0055526_1004190 Ga0055526_10041903 150
300 3300003775 Ga0055524_1003917 Ga0055524_10039173 150
301 3300003790 Ga0055528_1007322 Ga0055528_10073226 150
302 3300003792 Ga0055540_1010335 Ga0055540_10103352 150
303 3300004625 Ga0055543_1000399 Ga0055543_100039919 150
304 3300005262 Ga0065165_1054763 Ga0065165_10547631 150
305 3300005436 Ga0070713_100446738 Ga0070713_1004467382 150
306 3300005983 Ga0081540_1000433 Ga0081540_100043312 150
307 3300006038 Ga0075365_10147350 Ga0075365_101473502 150
308 3300006173 Ga0070716_100056515 Ga0070716_1000565152 150
309 3300006175 Ga0070712_100159773 Ga0070712_1001597733 150
310 3300025208 Ga0209436_100019 Ga0209436_10001971 150
311 3300025245 Ga0207425_1024070 Ga0207425_10240702 150
312 3300025258 Ga0209129_1007552 Ga0209129_10075523 150
313 3300025258 Ga0209129_1047964 Ga0209129_10479641 150
314 3300025273 Ga0209673_1002286 Ga0209673_10022869 150
315 3300025284 Ga0209130_1000066 Ga0209130_100006667 150
316 3300025295 Ga0209564_1000520 Ga0209564_10005203 150
317 3300025297 Ga0209758_1004430 Ga0209758_100443012 150
318 3300025297 Ga0209758_1010291 Ga0209758_10102914 150
319 3300025299 Ga0209256_1014286 Ga0209256_10142863 150
320 3300025299 Ga0209256_1074802 Ga0209256_10748021 150
321 3300025302 Ga0207426_1000008 Ga0207426_1000008816 150
322 3300025303 Ga0209051_1004236 Ga0209051_10042367 150
323 3300025304 Ga0209257_1057736 Ga0209257_10577362 150
324 3300025928 Ga0207700_10364311 Ga0207700_103643112 150
325 3300025939 Ga0207665_10072941 Ga0207665_100729412 150
326 3300026075 Ga0207708_10095275 Ga0207708_100952752 150
327 3300039447 Ga0436361_0959883 Ga0436361_0959883_778_1260 150
328 3300041413 Ga0439465_0052736 Ga0439465_0052736_688_1140 150
329 3300046501 Ga0495607_0019207 Ga0495607_0019207_846_1298 150
330 3300046519 Ga0495632_0098434 Ga0495632_0098434_154_606 150
331 3300046522 Ga0495643_0069239 Ga0495643_0069239_16_468 150
332 3300046530 Ga0495654_0367547 Ga0495654_0367547_42_494 150
333 3300048915 Ga0496112_0931650 Ga0496112_0931650_170_652 150
334 3300048926 Ga0496123_0000022 Ga0496123_0000022_42434_42898 150
335 3300048929 Ga0496126_0195592 Ga0496126_0195592_417_881 150
336 3300053125 Ga0500618_002852 Ga0500618_002852_1186_1638 150
337 3300053133 Ga0500655_060049 Ga0500655_060049_178_630 150

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01220

DHquinase_II

Dehydroquinase class II

33

170

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
1gtz-assembly1.cif.gz_C structure of streptomyces coelicolor type ii dehydroquinase r23a mutant in complex with dehydroshikimate 0.9847 4 144
3n59-assembly2.cif.gz_P type ii dehydroquinase from mycobacterium tuberculosis complexed with 3-dehydroshikimate 0.9814 4 142
4ckx-assembly1.cif.gz_A structure of the mycobacterium tuberculosis type ii dehydroquinase n12s mutant (crystal form 2) 0.9813 4 142
4ki7-assembly1.cif.gz_A design and structural analysis of aromatic inhibitors of type ii dehydroquinase from mycobacterium tuberculosis - compound 41c [3-hydroxy-5-(3-nitrophenoxy)benzoic acid] 0.9796 4 142
3n59-assembly2.cif.gz_N type ii dehydroquinase from mycobacterium tuberculosis complexed with 3-dehydroshikimate 0.9794 4 142
ID Description Score Start End Superfamily
1d0iH00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9778 4 145 3.40.50.9100
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9772 4 142 3.40.50.9100
4kiuM00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.956 4 142 3.40.50.9100
1gqoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9554 4 140 3.40.50.9100
2c57B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Dehydroquinase, class II 0.9462 4 149 3.40.50.9100
ID Description Score Start End GO Terms
AF-A0A4Z0NWV2-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9957 2 148 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A6M1Q7C6-F1-model_v4 deleted 0.9942 27 142
AF-A0A441Z2W7-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9941 4 140 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0016020
GO:0019631
AF-A0A0Q6PVH6-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9941 7 145 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631
AF-A0A1H7UK82-F1-model_v4 3-dehydroquinate dehydratase (3-dehydroquinase) (EC 4.2.1.10) (Type II DHQase) 0.9939 1 144 GO:0003855
GO:0008652
GO:0009073
GO:0009423
GO:0019631

Feature Viewer

pLDDT pTM Quality
92.54 0.89 High
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Predicted Structure (AlphaFold2)

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