F412980

General Info

Members Datasets Scaffolds Average Seq Length
337 197 674 114

Family's Representative Sequence

Representative Sequence 3300005471|Ga0070698_100000262|Ga0070698_1000002624
Length 133
Sequence VLARPAPRLPVPWYPGRVRKHQVVAELLSAERADTLERLTGLERELTGIIESSGLAGTDDEHDPEGATIAFERQHLAALVSQARRHLAQIDAAMLRLAEGSYGRCESCGQPISAARLAARPVSTLCITCASRR

Samples

Sample ID Description Type Environment
1 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
8 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
16 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
29 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
35 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
43 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
44 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
47 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
61 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
88 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
96 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
97 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
98 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
100 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
101 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
102 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
103 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
104 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
105 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
106 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
107 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
108 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
109 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
110 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
111 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
112 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
113 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
114 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
117 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
118 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
119 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
120 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
121 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
122 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
123 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
124 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
125 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
126 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
127 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
128 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
129 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
130 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
131 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
132 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
133 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
134 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
135 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
136 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
137 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
138 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
139 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
140 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
141 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
142 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
143 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
144 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
145 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
146 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
147 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
148 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
149 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
150 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
154 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
155 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
156 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
157 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
158 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
159 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
160 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
161 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
165 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
166 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
167 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
168 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
169 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
170 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
171 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
172 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
173 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
174 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
175 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
176 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
177 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
178 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
179 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
180 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
184 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
185 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
186 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
187 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
188 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
189 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
190 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
191 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
192 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
193 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
194 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
195 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
196 2643221615 Nocardioides sp. Root224 Isolate Unclassified
197 2643221657 Nocardioides sp. Root1257 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.52
Metatranscriptomes 0.89
Isolates 0.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.26
Nodule 0
Rhizoplane 4.45
Rhizosphere 89.91
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070698_100000262 3300005471 Bacteria 53087
2 Ga0070690_100350771 3300005330 Bacteria 1071
3 Ga0070680_100383639 3300005336 Bacteria 1197
4 Ga0070682_100340857 3300005337 Bacteria 1114
5 Ga0070691_10525034 3300005341 Bacteria 688
6 Ga0070675_100923605 3300005354 Bacteria 800
7 Ga0070709_10000302 3300005434 Bacteria 31385
8 Ga0070709_10516536 3300005434 Bacteria 909
9 Ga0070714_100000357 3300005435 Bacteria 34252
10 Ga0070714_100144210 3300005435 Bacteria 2140
11 Ga0070714_100237452 3300005435 Bacteria 1681
12 Ga0070714_100260950 3300005435 Bacteria 1604
13 Ga0070714_100360123 3300005435 Bacteria 1367
14 Ga0070714_100366746 3300005435 Bacteria 1355
15 Ga0070714_100556020 3300005435 Bacteria 1099
16 Ga0070713_100015631 3300005436 Bacteria 5683
17 Ga0070713_100123301 3300005436 Bacteria 2275
18 Ga0070713_100271064 3300005436 Bacteria 1554
19 Ga0070713_100281222 3300005436 Bacteria 1527
20 Ga0070713_101481314 3300005436 Bacteria 658
21 Ga0070710_10000087 3300005437 Bacteria 41867
22 Ga0070710_10047025 3300005437 Bacteria 2405
23 Ga0070711_100024530 3300005439 Bacteria 3935
24 Ga0070711_100026016 3300005439 Bacteria 3832
25 Ga0070711_100107143 3300005439 Bacteria 2045
26 Ga0070711_100121672 3300005439 Bacteria 1931
27 Ga0070705_100406025 3300005440 Bacteria 1010
28 Ga0070708_100286616 3300005445 Bacteria 1550
29 Ga0070706_100054102 3300005467 Bacteria 3705
30 Ga0070706_100067634 3300005467 Bacteria 3304
31 Ga0070706_100100208 3300005467 Bacteria 2691
32 Ga0070707_100052044 3300005468 Bacteria 3925
33 Ga0070707_100127972 3300005468 Bacteria 2468
34 Ga0070707_101268482 3300005468 Bacteria 703
35 Ga0070698_100001189 3300005471 Bacteria 28864
36 Ga0070699_100462222 3300005518 Bacteria 1151
37 Ga0070679_100680208 3300005530 Bacteria 972
38 Ga0070684_100254006 3300005535 Bacteria 1607
39 Ga0070697_100193238 3300005536 Bacteria 1728
40 Ga0068853_100903818 3300005539 Bacteria 848
41 Ga0068857_100355102 3300005577 Bacteria 1358
42 Ga0068856_100011457 3300005614 Bacteria 8605
43 Ga0068856_100183455 3300005614 Bacteria 2106
44 Ga0070702_100078851 3300005615 Bacteria 1967
45 Ga0068852_101378581 3300005616 Bacteria 727
46 Ga0068859_100475367 3300005617 Bacteria 1345
47 Ga0068864_100069767 3300005618 Bacteria 3057
48 Ga0068861_100910994 3300005719 Bacteria 833
49 Ga0068863_100251052 3300005841 Bacteria 1709
50 Ga0068858_100064414 3300005842 Bacteria 3392
51 Ga0070717_10001182 3300006028 Bacteria 17672
52 Ga0070717_10019422 3300006028 Bacteria 5328
53 Ga0070717_10106320 3300006028 Bacteria 2389
54 Ga0070717_10521000 3300006028 Bacteria 1075
55 Ga0075365_10225848 3300006038 Bacteria 1314
56 Ga0075365_10724068 3300006038 Bacteria 703
57 Ga0075363_100006740 3300006048 Bacteria 5244
58 Ga0075363_100405069 3300006048 Bacteria 802
59 Ga0075364_10100111 3300006051 Bacteria 1929
60 Ga0070715_10060807 3300006163 Bacteria 1657
61 Ga0070715_10195459 3300006163 Bacteria 1024
62 Ga0070716_100407070 3300006173 Bacteria 980
63 Ga0070712_100002139 3300006175 Bacteria 12153
64 Ga0070712_100064130 3300006175 Bacteria 2604
65 Ga0070712_100233530 3300006175 Bacteria 1462
66 Ga0070712_100400557 3300006175 Bacteria 1133
67 Ga0097621_100113595 3300006237 Bacteria 2290
68 Ga0075370_10163855 3300006353 Bacteria 1305
69 Ga0068871_100678362 3300006358 Bacteria 943
70 Ga0075436_100402716 3300006914 Bacteria 992
71 Ga0097620_100475383 3300006931 Bacteria 1345
72 Ga0075435_100240372 3300007076 Bacteria 1540
73 Ga0105251_10148175 3300009011 Bacteria 1060
74 Ga0105240_11393884 3300009093 Bacteria 737
75 Ga0105245_10054469 3300009098 Bacteria 3592
76 Ga0105248_10136723 3300009177 Bacteria 2765
77 Ga0105238_10133682 3300009551 Bacteria 2458
78 Ga0105238_11451475 3300009551 Bacteria 714
79 Ga0105246_10543701 3300011119 Bacteria 994
80 Ga0157370_10388205 3300013104 Bacteria 1286
81 Ga0157369_10395227 3300013105 Bacteria 1434
82 Ga0157374_10030329 3300013296 Bacteria 4909
83 Ga0163162_10230256 3300013306 Bacteria 1983
84 Ga0157372_10693977 3300013307 Bacteria 1185
85 Ga0157375_10041603 3300013308 Bacteria 4439
86 Ga0157375_10303246 3300013308 Bacteria 1761
87 Ga0157377_10201848 3300014745 Bacteria 1263
88 Ga0157379_10014600 3300014968 Bacteria 6889
89 Ga0157376_10046122 3300014969 Bacteria 3592
90 Ga0206354_10318236 3300020081 Bacteria 610
91 Ga0206353_11556604 3300020082 Bacteria 947
92 Ga0224572_1092210 3300024225 Bacteria 559
93 Ga0207692_10000100 3300025898 Bacteria 25452
94 Ga0207692_10040620 3300025898 Bacteria 2297
95 Ga0207685_10031704 3300025905 Bacteria 1895
96 Ga0207685_10057574 3300025905 Bacteria 1525
97 Ga0207699_10000381 3300025906 Bacteria 23361
98 Ga0207699_10131681 3300025906 Bacteria 1632
99 Ga0207699_10266819 3300025906 Bacteria 1185
100 Ga0207699_10306749 3300025906 Bacteria 1110
101 Ga0207684_10057992 3300025910 Bacteria 3286
102 Ga0207695_11053751 3300025913 Bacteria 693
103 Ga0207693_10000450 3300025915 Bacteria 37643
104 Ga0207693_10220199 3300025915 Bacteria 1491
105 Ga0207663_10002217 3300025916 Bacteria 9304
106 Ga0207663_10017597 3300025916 Bacteria 3987
107 Ga0207663_10420867 3300025916 Bacteria 1025
108 Ga0207663_10884588 3300025916 Bacteria 714
109 Ga0207660_11012793 3300025917 Bacteria 677
110 Ga0207652_10557298 3300025921 Bacteria 1030
111 Ga0207646_10007136 3300025922 Bacteria 11427
112 Ga0207646_10424521 3300025922 Bacteria 1200
113 Ga0207646_10963832 3300025922 Bacteria 755
114 Ga0207694_10360424 3300025924 Bacteria 1205
115 Ga0207659_10914418 3300025926 Bacteria 754
116 Ga0207687_10344974 3300025927 Bacteria 1212
117 Ga0207700_10000164 3300025928 Bacteria 39704
118 Ga0207700_10035554 3300025928 Bacteria 3589
119 Ga0207700_10082853 3300025928 Bacteria 2509
120 Ga0207700_10525259 3300025928 Bacteria 1049
121 Ga0207700_11799113 3300025928 Bacteria 539
122 Ga0207664_10000232 3300025929 Bacteria 42208
123 Ga0207664_10010007 3300025929 Bacteria 6683
124 Ga0207664_10035740 3300025929 Bacteria 3836
125 Ga0207664_10523448 3300025929 Bacteria 1063
126 Ga0207664_10742508 3300025929 Bacteria 883
127 Ga0207664_10930168 3300025929 Bacteria 780
128 Ga0207664_10965265 3300025929 Bacteria 764
129 Ga0207665_10413774 3300025939 Bacteria 1029
130 Ga0207711_10464775 3300025941 Bacteria 1178
131 Ga0207667_10987282 3300025949 Bacteria 830
132 Ga0207712_11154684 3300025961 Bacteria 690
133 Ga0207677_11205021 3300026023 Bacteria 693
134 Ga0207703_10479735 3300026035 Bacteria 1165
135 Ga0207702_10091211 3300026078 Bacteria 2668
136 Ga0207702_10144283 3300026078 Bacteria 2158
137 Ga0207641_10265991 3300026088 Bacteria 1607
138 Ga0207641_10457951 3300026088 Bacteria 1234
139 Ga0207674_10808396 3300026116 Bacteria 905
140 Ga0207674_11117727 3300026116 Bacteria 757
141 Ga0207675_101598340 3300026118 Bacteria 672
142 Ga0207675_101720554 3300026118 Bacteria 647
143 Ga0207698_11247450 3300026142 Bacteria 758
144 Ga0265338_10876798 3300028800 Bacteria 612
145 Ga0307405_10858288 3300031731 Bacteria 765
146 Ga0307413_10636586 3300031824 Bacteria 878
147 Ga0307413_10801575 3300031824 Bacteria 792
148 Ga0307410_10570534 3300031852 Bacteria 940
149 Ga0307410_11222022 3300031852 Bacteria 655
150 Ga0307407_10742082 3300031903 Bacteria 743
151 Ga0307409_101570402 3300031995 Bacteria 686
152 Ga0307416_100160849 3300032002 Bacteria 2075
153 Ga0307416_101680324 3300032002 Bacteria 740
154 Ga0307416_102442725 3300032002 Bacteria 622
155 Ga0307411_10973343 3300032005 Bacteria 758
156 Ga0307411_11340660 3300032005 Bacteria 653
157 Ga0307415_100048063 3300032126 Bacteria 2877
158 Ga0307415_102375374 3300032126 Bacteria 521
159 Ga0373934_0000003 3300035086 Bacteria 87823
160 Ga0373934_0014688 3300035086 Bacteria 2967
161 Ga0373944_0107760 3300035089 Bacteria 948
162 Ga0373923_0037643 3300035111 Bacteria 1980
163 Ga0373923_0071139 3300035111 Bacteria 1494
164 Ga0373945_0078822 3300035116 Bacteria 1259
165 Ga0373953_0000247 3300035117 Bacteria 14687
166 Ga0373953_0031258 3300035117 Bacteria 2070
167 Ga0373954_0009828 3300035118 Bacteria 4210
168 Ga0373954_0062956 3300035118 Bacteria 1753
169 Ga0373956_0002403 3300035119 Bacteria 7642
170 Ga0373956_0039673 3300035119 Bacteria 2087
171 Ga0373957_0000418 3300035120 Bacteria 10759
172 Ga0373957_0365057 3300035120 Bacteria 618
173 Ga0373943_0059611 3300035170 Bacteria 1903
174 Ga0373943_0473523 3300035170 Bacteria 730
175 Ga0373946_0159068 3300035171 Bacteria 1059
176 Ga0373955_0000057 3300035172 Bacteria 43330
177 Ga0373955_0060769 3300035172 Bacteria 2085
178 Ga0373924_0000135 3300035410 Bacteria 21359
179 Ga0373924_0028343 3300035410 Bacteria 2231
180 Ga0373931_0559547 3300035691 Bacteria 744
181 Ga0373935_0203076 3300035692 Bacteria 1370
182 Ga0373935_0419266 3300035692 Bacteria 963
183 Ga0373933_0000003 3300035724 Bacteria 150420
184 Ga0373933_0013827 3300035724 Bacteria 4478
185 Ga0373947_0096735 3300035725 Bacteria 1849
186 Ga0373937_0000016 3300036401 Bacteria 145523
187 Ga0373937_0318586 3300036401 Bacteria 1471
188 Ga0373937_1935923 3300036401 Bacteria 536
189 Ga0372808_033079 3300036459 Bacteria 741
190 Ga0373925_0006259 3300037068 Bacteria 8776
191 Ga0373925_0247391 3300037068 Bacteria 1429
192 Ga0373925_0577467 3300037068 Bacteria 925
193 Ga0373925_0960016 3300037068 Bacteria 704
194 Ga0373925_1652623 3300037068 Bacteria 523
195 Ga0395901_1374819 3300038443 Bacteria 665
196 Ga0451793_0806774 3300041452 Bacteria 695
197 Ga0451802_1016648 3300041460 Bacteria 881
198 Ga0451807_0920648 3300041486 Bacteria 723
199 Ga0451833_0673987 3300041491 Bacteria 518
200 Ga0451843_0121579 3300041509 Bacteria 649
201 Ga0451843_1127444 3300041509 Bacteria 1296
202 Ga0451853_1001045 3300041512 Bacteria 627
203 Ga0466972_0033273 3300044658 Bacteria 2529
204 Ga0466972_0063210 3300044658 Bacteria 1773
205 Ga0466965_0033122 3300044683 Bacteria 2525
206 Ga0466965_0067841 3300044683 Bacteria 1790
207 Ga0466965_0473517 3300044683 Bacteria 700
208 Ga0466965_0835163 3300044683 Bacteria 535
209 Ga0466966_0017199 3300044684 Bacteria 4782
210 Ga0466966_0089694 3300044684 Bacteria 1910
211 Ga0466966_0326335 3300044684 Bacteria 922
212 Ga0466961_0029480 3300044693 Bacteria 3527
213 Ga0466961_0157056 3300044693 Bacteria 1419
214 Ga0466961_0566260 3300044693 Bacteria 684
215 Ga0466963_0092901 3300044694 Bacteria 2056
216 Ga0466963_0405947 3300044694 Bacteria 961
217 Ga0466971_0043063 3300044719 Bacteria 2029
218 Ga0466971_0152682 3300044719 Bacteria 1079
219 Ga0466970_0062992 3300044765 Bacteria 1988
220 Ga0466970_0144161 3300044765 Bacteria 1313
221 Ga0466970_0406234 3300044765 Bacteria 777
222 Ga0466970_0531658 3300044765 Bacteria 679
223 Ga0466970_0550350 3300044765 Bacteria 667
224 Ga0466957_0110937 3300044842 Bacteria 1739
225 Ga0466957_0856289 3300044842 Bacteria 648
226 Ga0466957_1369520 3300044842 Bacteria 514
227 Ga0466960_0021083 3300044901 Bacteria 2896
228 Ga0466960_0024958 3300044901 Bacteria 2701
229 Ga0466960_0165905 3300044901 Bacteria 1189
230 Ga0466959_0330413 3300045049 Bacteria 1041
231 Ga0466958_0319397 3300045836 Bacteria 998
232 Ga0466967_0098495 3300045976 Bacteria 2670
233 Ga0466967_0158488 3300045976 Bacteria 2123
234 Ga0466967_0188218 3300045976 Bacteria 1950
235 Ga0466967_0557591 3300045976 Bacteria 1128
236 Ga0466967_1343192 3300045976 Bacteria 712
237 Ga0466967_1426779 3300045976 Bacteria 690
238 Ga0466967_1471271 3300045976 Bacteria 678
239 Ga0466967_1668843 3300045976 Bacteria 635
240 Ga0466967_2033612 3300045976 Bacteria 571
241 Ga0495592_0000116 3300046454 Bacteria 70091
242 Ga0495592_0144842 3300046454 Bacteria 1648
243 Ga0495641_0275131 3300046461 Bacteria 758
244 Ga0495651_0000009 3300046462 Bacteria 150455
245 Ga0495651_0001280 3300046462 Bacteria 19483
246 Ga0495651_0243219 3300046462 Bacteria 1233
247 Ga0495653_0001057 3300046463 Bacteria 21196
248 Ga0495653_0052041 3300046463 Bacteria 3140
249 Ga0495639_0065387 3300046475 Bacteria 1673
250 Ga0495662_0195449 3300046476 Bacteria 997
251 Ga0495594_0362112 3300046499 Bacteria 826
252 Ga0495608_0000019 3300046511 Bacteria 180119
253 Ga0495608_0080004 3300046511 Bacteria 2124
254 Ga0495608_0104278 3300046511 Bacteria 1826
255 Ga0495618_0173780 3300046514 Bacteria 1370
256 Ga0495628_0000487 3300046516 Bacteria 36399
257 Ga0495628_0011514 3300046516 Bacteria 7477
258 Ga0495628_0065113 3300046516 Bacteria 2852
259 Ga0495628_0458168 3300046516 Bacteria 925
260 Ga0495666_0157322 3300046526 Bacteria 1055
261 Ga0495652_0000430 3300046529 Bacteria 49080
262 Ga0495652_0073294 3300046529 Bacteria 2851
263 Ga0495652_0310532 3300046529 Bacteria 1143
264 Ga0495665_0419833 3300046531 Bacteria 678
265 Ga0495640_0004507 3300046533 Bacteria 11106
266 Ga0495586_0125562 3300046535 Bacteria 1435
267 Ga0495587_0000041 3300046536 Bacteria 110168
268 Ga0495587_0001020 3300046536 Bacteria 18423
269 Ga0495645_0013209 3300046543 Bacteria 5839
270 Ga0495645_0068643 3300046543 Bacteria 2559
271 Ga0495645_0117661 3300046543 Bacteria 1874
272 Ga0495645_0281926 3300046543 Bacteria 1092
273 Ga0495667_0000037 3300046559 Bacteria 133780
274 Ga0495667_0008915 3300046559 Bacteria 6819
275 Ga0495667_0079563 3300046559 Bacteria 2131
276 Ga0495634_0022219 3300046642 Bacteria 4471
277 Ga0495635_0015902 3300046663 Bacteria 5256
278 Ga0495635_0103664 3300046663 Bacteria 1944
279 Ga0495635_0660076 3300046663 Bacteria 680
280 Ga0495657_0000094 3300046675 Bacteria 78779
281 Ga0495657_0032045 3300046675 Bacteria 3671
282 Ga0495599_0000040 3300046678 Bacteria 97423
283 Ga0495599_0010267 3300046678 Bacteria 5730
284 Ga0495623_0000284 3300046679 Bacteria 32990
285 Ga0495623_0217502 3300046679 Bacteria 1090
286 Ga0495646_0006814 3300046680 Bacteria 7251
287 Ga0495646_0010661 3300046680 Bacteria 5838
288 Ga0495658_1035658 3300046683 Bacteria 524
289 Ga0495613_0203309 3300046689 Bacteria 1396
290 Ga0495600_0007480 3300046809 Bacteria 6685
291 Ga0495600_0012423 3300046809 Bacteria 5324
292 Ga0495581_0299621 3300047315 Bacteria 940
293 Ga0495604_0000040 3300047317 Bacteria 120837
294 Ga0495604_0021710 3300047317 Bacteria 5125
295 Ga0495674_0081620 3300047319 Bacteria 2773
296 Ga0495680_0000010 3300047322 Bacteria 142931
297 Ga0495680_0016915 3300047322 Bacteria 6244
298 Ga0495675_0000111 3300047444 Bacteria 58822
299 Ga0495684_0001523 3300047471 Bacteria 18568
300 Ga0495593_0145272 3300047673 Bacteria 1201
301 Ga0495602_0000130 3300048088 Bacteria 71178
302 Ga0495602_0014433 3300048088 Bacteria 8018
303 Ga0496102_0063409 3300048905 Bacteria 3384
304 Ga0496104_0069139 3300048907 Bacteria 3356
305 Ga0496104_1014964 3300048907 Bacteria 734
306 Ga0496105_0169127 3300048908 Bacteria 1792
307 Ga0496106_0886404 3300048909 Bacteria 705
308 Ga0496108_0016580 3300048911 Bacteria 6015
309 Ga0496108_1331773 3300048911 Bacteria 603
310 Ga0496109_0303766 3300048912 Bacteria 1505
311 Ga0496110_0007844 3300048913 Bacteria 8552
312 Ga0496111_0473151 3300048914 Bacteria 924
313 Ga0496113_0486346 3300048916 Bacteria 991
314 Ga0496114_0396760 3300048917 Bacteria 1222
315 Ga0496126_0168637 3300048929 Bacteria 1867
316 Ga0501039_0567704 3300049575 Bacteria 890
317 Ga0501040_0171847 3300049576 Bacteria 1535
318 Ga0501069_0241588 3300049585 Bacteria 1052
319 Ga0501079_0140014 3300049741 Bacteria 1885
320 nmdc:mga03n38_115335_c1 3300050490 Bacteria 1314
321 nmdc:mga00v17_238847_c1 3300050491 Bacteria 1178
322 nmdc:mga0yw44_167583_c1 3300050492 Bacteria 1441
323 nmdc:mga0yw44_411549_c1 3300050492 Bacteria 915
324 nmdc:mga07m45_450060_c1 3300050496 Bacteria 747
325 nmdc:mga0rr50_168382_c1 3300050513 Bacteria 1783
326 nmdc:mga08x19_1097660_c1 3300050514 Bacteria 565
327 nmdc:mga0a205_1236977_c1 3300050515 Bacteria 594
328 Ga0495601_0021080 3300053077 Bacteria 3987
329 Ga0495612_0113569 3300053078 Bacteria 1161
330 Ga0495595_0000857 3300053084 Bacteria 11668
331 Ga0495595_0031770 3300053084 Bacteria 2374
332 Ga0495619_0033030 3300053085 Bacteria 3359
333 Ga0495619_0434465 3300053085 Bacteria 905
334 Ga0466962_0168242 3300061719 Bacteria 1067
335 Ga0466962_0347823 3300061719 Bacteria 738
336 2644091472 2643221615 Bacteria 5487866
337 2644321275 2643221657 Bacteria 5490246
338 Ga0070698_100000262
339 Ga0070690_100350771
340 Ga0070680_100383639
341 Ga0070682_100340857
342 Ga0070691_10525034
343 Ga0070675_100923605
344 Ga0070709_10000302
345 Ga0070709_10516536
346 Ga0070714_100000357
347 Ga0070714_100144210
348 Ga0070714_100237452
349 Ga0070714_100260950
350 Ga0070714_100360123
351 Ga0070714_100366746
352 Ga0070714_100556020
353 Ga0070713_100015631
354 Ga0070713_100123301
355 Ga0070713_100271064
356 Ga0070713_100281222
357 Ga0070713_101481314
358 Ga0070710_10000087
359 Ga0070710_10047025
360 Ga0070711_100024530
361 Ga0070711_100026016
362 Ga0070711_100107143
363 Ga0070711_100121672
364 Ga0070705_100406025
365 Ga0070708_100286616
366 Ga0070706_100054102
367 Ga0070706_100067634
368 Ga0070706_100100208
369 Ga0070707_100052044
370 Ga0070707_100127972
371 Ga0070707_101268482
372 Ga0070698_100001189
373 Ga0070699_100462222
374 Ga0070679_100680208
375 Ga0070684_100254006
376 Ga0070697_100193238
377 Ga0068853_100903818
378 Ga0068857_100355102
379 Ga0068856_100011457
380 Ga0068856_100183455
381 Ga0070702_100078851
382 Ga0068852_101378581
383 Ga0068859_100475367
384 Ga0068864_100069767
385 Ga0068861_100910994
386 Ga0068863_100251052
387 Ga0068858_100064414
388 Ga0070717_10001182
389 Ga0070717_10019422
390 Ga0070717_10106320
391 Ga0070717_10521000
392 Ga0075365_10225848
393 Ga0075365_10724068
394 Ga0075363_100006740
395 Ga0075363_100405069
396 Ga0075364_10100111
397 Ga0070715_10060807
398 Ga0070715_10195459
399 Ga0070716_100407070
400 Ga0070712_100002139
401 Ga0070712_100064130
402 Ga0070712_100233530
403 Ga0070712_100400557
404 Ga0097621_100113595
405 Ga0075370_10163855
406 Ga0068871_100678362
407 Ga0075436_100402716
408 Ga0097620_100475383
409 Ga0075435_100240372
410 Ga0105251_10148175
411 Ga0105240_11393884
412 Ga0105245_10054469
413 Ga0105248_10136723
414 Ga0105238_10133682
415 Ga0105238_11451475
416 Ga0105246_10543701
417 Ga0157370_10388205
418 Ga0157369_10395227
419 Ga0157374_10030329
420 Ga0163162_10230256
421 Ga0157372_10693977
422 Ga0157375_10041603
423 Ga0157375_10303246
424 Ga0157377_10201848
425 Ga0157379_10014600
426 Ga0157376_10046122
427 Ga0206354_10318236
428 Ga0206353_11556604
429 Ga0224572_1092210
430 Ga0207692_10000100
431 Ga0207692_10040620
432 Ga0207685_10031704
433 Ga0207685_10057574
434 Ga0207699_10000381
435 Ga0207699_10131681
436 Ga0207699_10266819
437 Ga0207699_10306749
438 Ga0207684_10057992
439 Ga0207695_11053751
440 Ga0207693_10000450
441 Ga0207693_10220199
442 Ga0207663_10002217
443 Ga0207663_10017597
444 Ga0207663_10420867
445 Ga0207663_10884588
446 Ga0207660_11012793
447 Ga0207652_10557298
448 Ga0207646_10007136
449 Ga0207646_10424521
450 Ga0207646_10963832
451 Ga0207694_10360424
452 Ga0207659_10914418
453 Ga0207687_10344974
454 Ga0207700_10000164
455 Ga0207700_10035554
456 Ga0207700_10082853
457 Ga0207700_10525259
458 Ga0207700_11799113
459 Ga0207664_10000232
460 Ga0207664_10010007
461 Ga0207664_10035740
462 Ga0207664_10523448
463 Ga0207664_10742508
464 Ga0207664_10930168
465 Ga0207664_10965265
466 Ga0207665_10413774
467 Ga0207711_10464775
468 Ga0207667_10987282
469 Ga0207712_11154684
470 Ga0207677_11205021
471 Ga0207703_10479735
472 Ga0207702_10091211
473 Ga0207702_10144283
474 Ga0207641_10265991
475 Ga0207641_10457951
476 Ga0207674_10808396
477 Ga0207674_11117727
478 Ga0207675_101598340
479 Ga0207675_101720554
480 Ga0207698_11247450
481 Ga0265338_10876798
482 Ga0307405_10858288
483 Ga0307413_10636586
484 Ga0307413_10801575
485 Ga0307410_10570534
486 Ga0307410_11222022
487 Ga0307407_10742082
488 Ga0307409_101570402
489 Ga0307416_100160849
490 Ga0307416_101680324
491 Ga0307416_102442725
492 Ga0307411_10973343
493 Ga0307411_11340660
494 Ga0307415_100048063
495 Ga0307415_102375374
496 Ga0373934_0000003
497 Ga0373934_0014688
498 Ga0373944_0107760
499 Ga0373923_0037643
500 Ga0373923_0071139
501 Ga0373945_0078822
502 Ga0373953_0000247
503 Ga0373953_0031258
504 Ga0373954_0009828
505 Ga0373954_0062956
506 Ga0373956_0002403
507 Ga0373956_0039673
508 Ga0373957_0000418
509 Ga0373957_0365057
510 Ga0373943_0059611
511 Ga0373943_0473523
512 Ga0373946_0159068
513 Ga0373955_0000057
514 Ga0373955_0060769
515 Ga0373924_0000135
516 Ga0373924_0028343
517 Ga0373931_0559547
518 Ga0373935_0203076
519 Ga0373935_0419266
520 Ga0373933_0000003
521 Ga0373933_0013827
522 Ga0373947_0096735
523 Ga0373937_0000016
524 Ga0373937_0318586
525 Ga0373937_1935923
526 Ga0372808_033079
527 Ga0373925_0006259
528 Ga0373925_0247391
529 Ga0373925_0577467
530 Ga0373925_0960016
531 Ga0373925_1652623
532 Ga0395901_1374819
533 Ga0451793_0806774
534 Ga0451802_1016648
535 Ga0451807_0920648
536 Ga0451833_0673987
537 Ga0451843_0121579
538 Ga0451843_1127444
539 Ga0451853_1001045
540 Ga0466972_0033273
541 Ga0466972_0063210
542 Ga0466965_0033122
543 Ga0466965_0067841
544 Ga0466965_0473517
545 Ga0466965_0835163
546 Ga0466966_0017199
547 Ga0466966_0089694
548 Ga0466966_0326335
549 Ga0466961_0029480
550 Ga0466961_0157056
551 Ga0466961_0566260
552 Ga0466963_0092901
553 Ga0466963_0405947
554 Ga0466971_0043063
555 Ga0466971_0152682
556 Ga0466970_0062992
557 Ga0466970_0144161
558 Ga0466970_0406234
559 Ga0466970_0531658
560 Ga0466970_0550350
561 Ga0466957_0110937
562 Ga0466957_0856289
563 Ga0466957_1369520
564 Ga0466960_0021083
565 Ga0466960_0024958
566 Ga0466960_0165905
567 Ga0466959_0330413
568 Ga0466958_0319397
569 Ga0466967_0098495
570 Ga0466967_0158488
571 Ga0466967_0188218
572 Ga0466967_0557591
573 Ga0466967_1343192
574 Ga0466967_1426779
575 Ga0466967_1471271
576 Ga0466967_1668843
577 Ga0466967_2033612
578 Ga0495592_0000116
579 Ga0495592_0144842
580 Ga0495641_0275131
581 Ga0495651_0000009
582 Ga0495651_0001280
583 Ga0495651_0243219
584 Ga0495653_0001057
585 Ga0495653_0052041
586 Ga0495639_0065387
587 Ga0495662_0195449
588 Ga0495594_0362112
589 Ga0495608_0000019
590 Ga0495608_0080004
591 Ga0495608_0104278
592 Ga0495618_0173780
593 Ga0495628_0000487
594 Ga0495628_0011514
595 Ga0495628_0065113
596 Ga0495628_0458168
597 Ga0495666_0157322
598 Ga0495652_0000430
599 Ga0495652_0073294
600 Ga0495652_0310532
601 Ga0495665_0419833
602 Ga0495640_0004507
603 Ga0495586_0125562
604 Ga0495587_0000041
605 Ga0495587_0001020
606 Ga0495645_0013209
607 Ga0495645_0068643
608 Ga0495645_0117661
609 Ga0495645_0281926
610 Ga0495667_0000037
611 Ga0495667_0008915
612 Ga0495667_0079563
613 Ga0495634_0022219
614 Ga0495635_0015902
615 Ga0495635_0103664
616 Ga0495635_0660076
617 Ga0495657_0000094
618 Ga0495657_0032045
619 Ga0495599_0000040
620 Ga0495599_0010267
621 Ga0495623_0000284
622 Ga0495623_0217502
623 Ga0495646_0006814
624 Ga0495646_0010661
625 Ga0495658_1035658
626 Ga0495613_0203309
627 Ga0495600_0007480
628 Ga0495600_0012423
629 Ga0495581_0299621
630 Ga0495604_0000040
631 Ga0495604_0021710
632 Ga0495674_0081620
633 Ga0495680_0000010
634 Ga0495680_0016915
635 Ga0495675_0000111
636 Ga0495684_0001523
637 Ga0495593_0145272
638 Ga0495602_0000130
639 Ga0495602_0014433
640 Ga0496102_0063409
641 Ga0496104_0069139
642 Ga0496104_1014964
643 Ga0496105_0169127
644 Ga0496106_0886404
645 Ga0496108_0016580
646 Ga0496108_1331773
647 Ga0496109_0303766
648 Ga0496110_0007844
649 Ga0496111_0473151
650 Ga0496113_0486346
651 Ga0496114_0396760
652 Ga0496126_0168637
653 Ga0501039_0567704
654 Ga0501040_0171847
655 Ga0501069_0241588
656 Ga0501079_0140014
657 nmdc:mga03n38_115335_c1
658 nmdc:mga00v17_238847_c1
659 nmdc:mga0yw44_167583_c1
660 nmdc:mga0yw44_411549_c1
661 nmdc:mga07m45_450060_c1
662 nmdc:mga0rr50_168382_c1
663 nmdc:mga08x19_1097660_c1
664 nmdc:mga0a205_1236977_c1
665 Ga0495601_0021080
666 Ga0495612_0113569
667 Ga0495595_0000857
668 Ga0495595_0031770
669 Ga0495619_0033030
670 Ga0495619_0434465
671 Ga0466962_0168242
672 Ga0466962_0347823
673 2644091472
674 2644321275

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01258

zf-dskA_traR

Prokaryotic dksA/traR C4-type zinc finger

100

133

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6dkm-assembly1.cif.gz_B dhd131 0.9434 2 80
4abm-assembly1.cif.gz_A crystal structure of chmp4b hairpin 0.9408 3 79
4abm-assembly3.cif.gz_D crystal structure of chmp4b hairpin 0.9252 3 79
8ffy-assembly1.cif.gz_B cryo-electron microscopy structure of human mt-serrs in complex with mt-trna(uga-tl) 0.9203 3 73
8bhf-assembly1.cif.gz_n1 cryo-em structure of stalled rabbit 80s ribosomes in complex with human ccr4-not and cnot4 0.9191 3 83
ID Description Score Start End Superfamily
af_Q1A5X7_28_153_1.20.120.560 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);alix/aip1 in complex with the ypdl late domain 0.9256 3 83 1.20.120.560
af_F1RDE3_1_209_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.9223 2 82 1.25.10.10
af_C7G036_1295_1678_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9199 2 81 3.40.50.300
af_I1NIC0_97_309_1.20.1250.10 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;; 0.919 4 74 1.20.1250.10
af_Q9H160_25_121_1.10.287.1060 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;ESAT-6-like 0.9153 3 83 1.10.287.1060
ID Description Score Start End GO Terms
AF-A0A1Q8CKW6-F1-model_v4 Dksa/trar family transcriptional regulator 0.9913 6 112 GO:0008270
AF-A0A370FMH9-F1-model_v4 TraR/DksA family transcriptional regulator 0.991 3 115 GO:0008270
AF-A0A3N1CT71-F1-model_v4 TraR/DksA family transcriptional regulator 0.9882 3 115 GO:0008270
AF-A0A3M0HJL3-F1-model_v4 Dksa/trar family transcriptional regulator 0.9859 6 115 GO:0008270
AF-A0A7V9DTX0-F1-model_v4 TraR/DksA C4-type zinc finger protein 0.9816 3 112 GO:0008270

Map