F412209

General Info

Members Datasets Scaffolds Average Seq Length
335 215 670 584

Family's Representative Sequence

Representative Sequence 3300009036|Ga0105244_10002489|Ga0105244_100024893
Length 629
Sequence LSKFFPSRSGAPIIYRFYTQIFHYRFTTGQVERTVSFNHYYQEELTALRESGRRFSERNPALAPFLGQAGQDPDVERLLEGVAFLTGRLRQKLDEDLPELTHSLMQLLWPNYLRPLPSVSMLQFDALDGSGPGFVVERATPVESEPVNDQVCYFRTCFATQVLPLKLTHLYCSSSGGGTTLKLCLAMNGDSHLGEVKFSQLRLHLAGERRISQAIYFAMMQKLKGITLLPLDAMGDPLLTSSGKAIELIIPVEHVKPVGFAEEESLIPYPLNTFRGYRYLQEYFFFPEKFLFVDVLGLDVIHSLTDDLLKRACGLQLVFDVQGKDMQPLRPTVENIKLYCTPVVNLFKQDALPILADARQDEYLLIPAHYAHGGCGVYSVDKVVGWQPGGLGYQNYVPFESFEHDAAVDVDSNSPYYSVRHRTSIQHKGLDTFLSFGLRAGRTDETMSIEMTCTNGDLPWQIKAGGLCKPCEGTPDFLRFRNISPATKTFAPPMDGDFFWRVISNMSLNYLSLENIEALKVILETYDLPRYYDSQAEKVSKHLLGGLKSIRHQHIDCLHDGLPVRGVRTELTVEPDGFAGEGSLFLFASVLNEFFALYASLNSFHELHVKSTQGGGYEWAPRMGMQPLL

Samples

Sample ID Description Type Environment
1 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
2 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
11 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
12 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
16 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
17 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
18 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
19 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
20 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
23 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
24 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
27 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
28 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
29 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
30 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
31 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
37 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
38 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
40 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
41 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
42 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
54 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
55 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
57 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
58 3300030735 Rhizosphere soil microbial communities in a healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 4 Metagenome Rhizosphere
59 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
60 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
61 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
62 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
63 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
66 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
67 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
68 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
69 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
70 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
71 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
72 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
73 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
74 3300042136 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530F_E14_072516_1294 Metagenome Rhizosphere
75 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
76 3300042139 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0727L_E14_072516_1442 Metagenome Rhizosphere
77 3300042142 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_072516_1610 Metagenome Rhizosphere
78 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
79 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
80 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
81 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
82 3300042533 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 Metagenome Rhizosphere
83 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
84 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
85 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
86 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
87 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
88 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
89 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
90 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
91 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
92 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
93 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
94 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
95 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
96 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
97 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
98 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
99 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
100 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
101 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
102 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
103 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
104 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
105 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
106 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
107 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
108 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
109 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
110 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
111 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
112 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
113 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
114 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
115 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
116 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
117 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
118 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
119 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
120 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
121 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
122 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
123 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
124 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
125 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
126 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
127 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
128 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
129 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
130 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
131 3300053135 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 endosphere Metagenome Endosphere
132 2511231004 Pseudomonas sp. GM102 Isolate Nodule
133 2511231010 Pseudomonas sp. GM25 Isolate Nodule
134 2511231011 Pseudomonas sp. GM30 Isolate Nodule
135 2511231016 Pseudomonas sp. GM50 Isolate Nodule
136 2511231022 Pseudomonas sp. GM79 Isolate Nodule
137 2511231023 Pseudomonas sp. GM80 Isolate Nodule
138 2511231031 Pseudomonas sp. GM16 Isolate Nodule
139 2511231156 Pseudomonas ogarae F113 Isolate Rhizosphere
140 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
141 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
142 2599185155 Pseudomonas sp. NFACC10-1 Isolate Rhizoplane
143 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
144 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
145 2599185305 Pseudomonas sp. NFACC07-1 Isolate Rhizoplane
146 2599185306 Pseudomonas sp. NFACC16-2 Isolate Rhizoplane
147 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
148 2599185308 Pseudomonas sp. NFACC17-2 Isolate Rhizoplane
149 2599185314 Pseudomonas sp. NFACC23-1 Isolate Rhizoplane
150 2600254954 Pseudomonas sp. NFACC19-2 Isolate Rhizoplane
151 2600255318 Pseudomonas putida NFIX47 Isolate Rhizoplane
152 2600255389 Pseudomonas sp. NFPP33 Isolate Rhizoplane
153 2603880185 Pseudomonas sp. NFIX46 Isolate Rhizoplane
154 2603880199 Pseudomonas sp. NFIX49 Isolate Rhizoplane
155 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
156 2623620443 Pseudomonas sp. DR 5-09 Isolate Unclassified
157 2643221565 Pseudomonas sp. Root562 Isolate Unclassified
158 2643221594 Achromobacter sp. Root170 Isolate Unclassified
159 2643221621 Achromobacter sp. Root83 Isolate Unclassified
160 2643221650 Pseudomonas sp. Root401 Isolate Unclassified
161 2651869719 Genome Sequence of Pseudomonas fluorescens UM270 Isolate Rhizosphere
162 2675903515 Pseudomonas thivervalensis DSM 13194 Isolate Unclassified
163 2713897148 Pseudomonas fluorescens SF39a Isolate Rhizosphere
164 2713897149 Pseudomonas fluorescens SF4c Isolate Rhizosphere
165 2718217725 Pseudomonas fluorescens CREA-C16 Isolate Rhizosphere
166 2728369097 Stutzerimonas balearica st101 Isolate Unclassified
167 2738541271 Pseudomonas sp. GV021 Isolate Unclassified
168 2738543016 Pseudomonas sp. GV012 Isolate Unclassified
169 2738543025 Pseudomonas sp. GV091 Isolate Unclassified
170 2744054620 Pseudomonas thivervalensis LMG 21626 Isolate Unclassified
171 2773857673 Pseudomonas sp. 443 Isolate Unclassified
172 2784132063 Pseudomonas sp. 424 Isolate Unclassified
173 2808606373 Pseudomonas sp. SLBN-2 Isolate Unclassified
174 2808606382 Pseudomonas sp. SJZ080 Isolate Rhizosphere
175 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
176 2808606445 Pseudomonas sp. SJZ131 Isolate Rhizosphere
177 2818991452 Burkholderia cepacia 561 Isolate Unclassified
178 2818991456 Pseudomonas koreensis 3286 Isolate Rhizosphere
179 2825651385 Pseudomonas brassicacearum L13-6-12 Isolate Rhizosphere
180 2842832357 Pseudomonas sp. R-72164 Isolate Unclassified
181 2842843487 Pseudomonas sp. R-72074 Isolate Unclassified
182 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
183 2852657418 Pseudomonas sp. JAI115 Isolate Rhizosphere
184 2878029506 Pseudomonas fluorescens DR397 Isolate Rhizosphere
185 2880230671 Pseudomonas fluorescens LBUM677 Isolate Unclassified
186 2904518522 Pseudomonas fluorescens 4488 Isolate Rhizosphere
187 2919063839 Pseudomonas pharyngis 1098 Isolate Rhizosphere
188 2919155634 Pseudomonas fulva 1992 Isolate Unclassified
189 2919385768 Pseudomonas sp. 2957 Isolate Unclassified
190 2919487758 Pseudomonas koreensis 3441 Isolate Unclassified
191 2923586266 Pseudomonas fluorescens 1550 Isolate Rhizosphere
192 2928170801 Burkholderia sp. 572 Isolate Unclassified
193 2928963466 Dyella japonica 1073 Isolate Unclassified
194 2939651529 Pseudomonas sp. 2835 Isolate Rhizosphere
195 2947233263 Pseudomonas synxantha W2I4 Isolate Rhizosphere
196 2969304461 Pseudomonas sp. R84 Isolate Rhizosphere
197 2974289157 Pseudomonas fluorescens SORGH_AS 191 Isolate Unclassified
198 2998139840 Pseudomonas iranensis SWRI54 Isolate Rhizosphere
199 3007419365 Pseudomonas vanderleydeniana RW8P3 Isolate Unclassified
200 3007614139 Pseudomonas sp. PB106 Isolate Unclassified
201 3007718800 Pseudomonas fluorescens BW11P2 Isolate Rhizosphere
202 3007803356 Pseudomonas sp. CM27 Isolate Unclassified
203 3007855910 Pseudomonas khorasanensis SWRI153 Isolate Rhizosphere
204 3007861166 Pseudomonas hamedanensis SWRI65 Isolate Rhizosphere
205 3007866637 Pseudomonas marvdashtae SWRI102 Isolate Rhizosphere
206 3007872151 Pseudomonas sp. SWRI51 Isolate Rhizosphere
207 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
208 8029995093 Pseudomonas atacamensis SM1 Isolate Rhizosphere
209 8034962539 Pseudomonas sediminis PI11 Isolate Rhizosphere
210 8052494512 Pseudomonas putida LD6 Isolate Unclassified
211 8056115690 Pseudomonas muyukensis COW39 Isolate Rhizosphere
212 8056137416 Pseudomonas fakonensis COW40 Isolate Rhizosphere
213 8056143049 Pseudomonas alvandae SWRI17 Isolate Rhizosphere
214 8056166840 Pseudomonas triticicola SWRI88 Isolate Rhizosphere
215 8056569372 Pseudomonas serboccidentalis IT-P374 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.54
Metatranscriptomes 0
Isolates 27.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.84
Nodule 4.18
Rhizoplane 5.37
Rhizosphere 59.1
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105244_10002489 3300009036 Bacteria 13872
2 JGI25162J39368_1000058 3300002737 Bacteria 139900
3 JGI25162J39368_1000134 3300002737 Bacteria 79787
4 JGI25164J39214_1000108 3300002772 Bacteria 79787
5 JGI25165J46597_1000220 3300003214 Bacteria 79787
6 Ga0055532_1000263 3300003758 Bacteria 34467
7 Ga0055527_1000239 3300003760 Bacteria 34467
8 Ga0055535_1000509 3300003761 Bacteria 34467
9 Ga0055542_1002093 3300003762 Bacteria 7421
10 Ga0055536_1000262 3300003781 Bacteria 41063
11 Ga0055536_1000302 3300003781 Bacteria 37000
12 Ga0055536_1005988 3300003781 Bacteria 5787
13 Ga0055530_10001054 3300003791 Bacteria 21877
14 Ga0055530_10001072 3300003791 Bacteria 21548
15 Ga0055540_1000759 3300003792 Bacteria 21890
16 Ga0055540_1001301 3300003792 Bacteria 15100
17 Ga0055531_10000423 3300003794 Bacteria 40041
18 Ga0065714_10002305 3300005288 Bacteria 29558
19 Ga0065714_10069363 3300005288 Bacteria 4257
20 Ga0065704_10070623 3300005289 Bacteria 18985
21 Ga0065704_10077601 3300005289 Bacteria 4683
22 Ga0070669_100000281 3300005353 Bacteria 40520
23 Ga0075436_100010435 3300006914 Bacteria 6368
24 Ga0099823_1000001 3300006944 Bacteria 216833
25 Ga0079104_1000399 3300006946 Bacteria 50336
26 Ga0099826_10000444 3300006948 Bacteria 19778
27 Ga0105251_10005034 3300009011 Bacteria 8768
28 Ga0105251_10007194 3300009011 Bacteria 6914
29 Ga0105251_10018448 3300009011 Bacteria 3710
30 Ga0105251_10024610 3300009011 Bacteria 3090
31 Ga0105251_10026226 3300009011 Bacteria 2969
32 Ga0105251_10026706 3300009011 Bacteria 2938
33 Ga0105244_10007943 3300009036 Bacteria 6684
34 Ga0105243_10000803 3300009148 Bacteria 29987
35 Ga0105243_10003844 3300009148 Bacteria 12001
36 Ga0157371_10000053 3300013102 Bacteria 176879
37 Ga0157371_10006759 3300013102 Bacteria 9376
38 Ga0157370_10264341 3300013104 Bacteria 1590
39 Ga0157372_10007774 3300013307 Bacteria 11387
40 Ga0157372_10035855 3300013307 Bacteria 5462
41 Ga0157375_10002445 3300013308 Bacteria 16067
42 Ga0182008_10008756 3300014497 Bacteria 5500
43 Ga0182008_10012113 3300014497 Bacteria 4560
44 Ga0182008_10023140 3300014497 Bacteria 3177
45 Ga0182006_1001925 3300015261 Bacteria 11810
46 Ga0182006_1005037 3300015261 Bacteria 6356
47 Ga0182006_1018987 3300015261 Bacteria 2899
48 Ga0182007_10001483 3300015262 Bacteria 12557
49 Ga0182005_1000389 3300015265 Bacteria 23926
50 Ga0209760_100045 3300025207 Bacteria 109664
51 Ga0209566_100469 3300025225 Bacteria 29021
52 Ga0209674_101668 3300025226 Bacteria 5527
53 Ga0209672_100026 3300025228 Bacteria 348998
54 Ga0209147_100033 3300025229 Bacteria 348998
55 Ga0209563_101534 3300025230 Bacteria 6030
56 Ga0207427_100006 3300025231 Bacteria 785415
57 Ga0209437_100013 3300025233 Bacteria 785457
58 Ga0209258_100051 3300025242 Bacteria 348998
59 Ga0209148_1000499 3300025254 Bacteria 40017
60 Ga0209759_1001661 3300025256 Bacteria 11648
61 Ga0209233_1000022 3300025261 Bacteria 785415
62 Ga0209455_1000410 3300025272 Bacteria 34602
63 Ga0209675_1009078 3300025291 Bacteria 3555
64 Ga0209676_1000015 3300025292 Bacteria 784458
65 Ga0209676_1000030 3300025292 Bacteria 506421
66 Ga0209676_1000041 3300025292 Bacteria 424583
67 Ga0209676_1000050 3300025292 Bacteria 398350
68 Ga0209676_1006360 3300025292 Bacteria 5853
69 Ga0209050_1000030 3300025298 Bacteria 463381
70 Ga0209050_1000553 3300025298 Bacteria 61622
71 Ga0209051_1000012 3300025303 Bacteria 595474
72 Ga0209051_1000519 3300025303 Bacteria 48314
73 Ga0209051_1009458 3300025303 Bacteria 5020
74 Ga0209257_1000143 3300025304 Bacteria 199975
75 Ga0207696_1000081 3300025711 Bacteria 198887
76 Ga0207696_1000204 3300025711 Bacteria 90602
77 Ga0207696_1001870 3300025711 Bacteria 10791
78 Ga0207696_1002404 3300025711 Bacteria 9194
79 Ga0207655_1000116 3300025728 Bacteria 161950
80 Ga0207655_1002070 3300025728 Bacteria 16836
81 Ga0207655_1002456 3300025728 Bacteria 15032
82 Ga0207655_1009940 3300025728 Bacteria 5842
83 Ga0207655_1010016 3300025728 Bacteria 5808
84 Ga0207655_1014423 3300025728 Bacteria 4466
85 Ga0207655_1024447 3300025728 Bacteria 2960
86 Ga0207713_1001457 3300025735 Bacteria 18849
87 Ga0207713_1002423 3300025735 Bacteria 13624
88 Ga0207713_1003558 3300025735 Bacteria 10538
89 Ga0207713_1005839 3300025735 Bacteria 7610
90 Ga0207713_1006228 3300025735 Bacteria 7307
91 Ga0207713_1011067 3300025735 Bacteria 4938
92 Ga0207713_1018005 3300025735 Bacteria 3514
93 Ga0207713_1022138 3300025735 Bacteria 3025
94 Ga0207681_10000209 3300025923 Bacteria 46652
95 Ga0207709_10000061 3300025935 Bacteria 199097
96 Ga0207709_10006804 3300025935 Bacteria 6396
97 Ga0209281_1000091 3300027111 Bacteria 242588
98 Ga0209281_1001279 3300027111 Bacteria 16162
99 Ga0209281_1002620 3300027111 Bacteria 6924
100 Ga0209389_1000007 3300027296 Bacteria 227459
101 Ga0268266_10005131 3300028379 Bacteria 12343
102 Ga0307511_10009890 3300030521 Bacteria 9495
103 Ga0316179_1100687 3300030734 Bacteria 5263
104 Ga0316178_1047147 3300030735 Bacteria 102800
105 Ga0307408_100000615 3300031548 Bacteria 30385
106 Ga0307408_100002064 3300031548 Bacteria 14451
107 Ga0307408_100002160 3300031548 Bacteria 14070
108 Ga0307405_10000201 3300031731 Bacteria 21885
109 Ga0307406_10000331 3300031901 Bacteria 27455
110 Ga0307407_10002974 3300031903 Bacteria 6801
111 Ga0307412_10000498 3300031911 Bacteria 23405
112 Ga0307412_10000607 3300031911 Bacteria 21079
113 Ga0307414_10003609 3300032004 Bacteria 8283
114 Ga0307414_10017288 3300032004 Bacteria 4409
115 Ga0307411_10003655 3300032005 Bacteria 7197
116 Ga0237819_01649 3300038705 Bacteria 5483
117 Ga0439447_000479 3300041407 Bacteria 14844
118 Ga0439447_001532 3300041407 Bacteria 8458
119 Ga0439447_010687 3300041407 Bacteria 2712
120 Ga0439466_0000603 3300041411 Bacteria 13480
121 Ga0439466_0004201 3300041411 Bacteria 5557
122 Ga0439466_0006969 3300041411 Bacteria 4284
123 Ga0439432_000044 3300042006 Bacteria 37803
124 Ga0439432_000112 3300042006 Bacteria 26175
125 Ga0439432_003615 3300042006 Bacteria 5720
126 Ga0439451_001925 3300042009 Bacteria 4151
127 Ga0439452_002480 3300042010 Bacteria 6786
128 Ga0439452_004126 3300042010 Bacteria 4934
129 Ga0439452_010490 3300042010 Bacteria 2692
130 Ga0439452_010656 3300042010 Bacteria 2663
131 Ga0439456_000212 3300042013 Bacteria 16088
132 Ga0439456_002055 3300042013 Bacteria 4050
133 Ga0450911_000016 3300042115 Bacteria 108997
134 Ga0450911_002274 3300042115 Bacteria 3857
135 Ga0450900_001573 3300042136 Bacteria 2256
136 Ga0450902_000396 3300042137 Bacteria 5315
137 Ga0450904_000163 3300042139 Bacteria 14697
138 Ga0450905_000056 3300042142 Bacteria 10056
139 Ga0450905_002667 3300042142 Bacteria 2306
140 Ga0450906_000046 3300042145 Bacteria 19736
141 Ga0450907_000212 3300042146 Bacteria 20781
142 Ga0450910_000931 3300042147 Bacteria 3544
143 Ga0439446_0000530 3300042156 Bacteria 7650
144 Ga0450901_000268 3300042533 Bacteria 6313
145 Ga0495627_000010 3300046453 Bacteria 381168
146 Ga0495590_0000037 3300046457 Bacteria 128848
147 Ga0495590_0000347 3300046457 Bacteria 23924
148 Ga0495590_0022722 3300046457 Bacteria 2217
149 Ga0495591_000061 3300046458 Bacteria 126594
150 Ga0495591_004080 3300046458 Bacteria 7274
151 Ga0495638_0002398 3300046460 Bacteria 15345
152 Ga0495638_0007256 3300046460 Bacteria 7968
153 Ga0495638_0043829 3300046460 Bacteria 2821
154 Ga0495653_0004742 3300046463 Bacteria 11013
155 Ga0495605_0002058 3300046474 Bacteria 12687
156 Ga0495584_0015920 3300046491 Bacteria 3837
157 Ga0495585_0000543 3300046492 Bacteria 35647
158 Ga0495585_0007965 3300046492 Bacteria 6442
159 Ga0495607_0000504 3300046501 Bacteria 38693
160 Ga0495607_0000560 3300046501 Bacteria 36227
161 Ga0495607_0003538 3300046501 Bacteria 11896
162 Ga0495607_0039866 3300046501 Bacteria 2802
163 Ga0495606_0002126 3300046507 Bacteria 23955
164 Ga0495606_0004428 3300046507 Bacteria 14044
165 Ga0495606_0004503 3300046507 Bacteria 13882
166 Ga0495606_0004506 3300046507 Bacteria 13872
167 Ga0495606_0004687 3300046507 Bacteria 13513
168 Ga0495610_0001528 3300046512 Bacteria 20385
169 Ga0495620_0000104 3300046515 Bacteria 67620
170 Ga0495620_0000807 3300046515 Bacteria 19267
171 Ga0495631_0009189 3300046518 Bacteria 4951
172 Ga0495632_0000213 3300046519 Bacteria 58845
173 Ga0495632_0000861 3300046519 Bacteria 26713
174 Ga0495632_0001181 3300046519 Bacteria 22228
175 Ga0495637_0000041 3300046520 Bacteria 116280
176 Ga0495637_0000397 3300046520 Bacteria 32282
177 Ga0495637_0000520 3300046520 Bacteria 27986
178 Ga0495637_0000664 3300046520 Bacteria 23957
179 Ga0495637_0023099 3300046520 Bacteria 2830
180 Ga0495643_0001157 3300046522 Bacteria 25855
181 Ga0495648_0000178 3300046524 Bacteria 73793
182 Ga0495648_0001759 3300046524 Bacteria 20912
183 Ga0495654_0000071 3300046530 Bacteria 116100
184 Ga0495654_0000720 3300046530 Bacteria 25881
185 Ga0495654_0002013 3300046530 Bacteria 13376
186 Ga0495609_0000499 3300046538 Bacteria 31481
187 Ga0495609_0011695 3300046538 Bacteria 4176
188 Ga0495597_0000047 3300046542 Bacteria 102470
189 Ga0495597_0000137 3300046542 Bacteria 65550
190 Ga0495597_0001292 3300046542 Bacteria 18433
191 Ga0495661_0000528 3300046665 Bacteria 39498
192 Ga0495661_0001923 3300046665 Bacteria 16526
193 Ga0495661_0004639 3300046665 Bacteria 9886
194 Ga0495649_0000043 3300046694 Bacteria 121164
195 Ga0495649_0000530 3300046694 Bacteria 32394
196 Ga0495649_0001066 3300046694 Bacteria 21412
197 Ga0495649_0001780 3300046694 Bacteria 15888
198 Ga0495660_0000590 3300046810 Bacteria 28824
199 Ga0495660_0002324 3300046810 Bacteria 12186
200 Ga0495660_0009409 3300046810 Bacteria 5698
201 Ga0495683_0003942 3300047323 Bacteria 8542
202 Ga0495675_0000832 3300047444 Bacteria 18887
203 Ga0495673_0002845 3300047469 Bacteria 11778
204 Ga0495681_0022518 3300047470 Bacteria 3368
205 Ga0495686_0004484 3300047472 Bacteria 11480
206 Ga0495593_0000001 3300047673 Bacteria 233437
207 Ga0495626_0000871 3300048091 Bacteria 26834
208 Ga0495626_0001700 3300048091 Bacteria 16903
209 Ga0496110_0009812 3300048913 Bacteria 7755
210 Ga0496116_0002174 3300048919 Bacteria 20882
211 Ga0496117_0000133 3300048920 Bacteria 161454
212 Ga0496117_0001039 3300048920 Bacteria 42336
213 Ga0496117_0001487 3300048920 Bacteria 33597
214 Ga0496118_0002404 3300048921 Bacteria 25276
215 Ga0496118_0006193 3300048921 Bacteria 13258
216 Ga0496119_0057820 3300048922 Bacteria 2341
217 Ga0496120_0007616 3300048923 Bacteria 8027
218 Ga0496121_0013999 3300048924 Bacteria 8566
219 Ga0496122_0000350 3300048925 Bacteria 99606
220 Ga0496122_0004827 3300048925 Bacteria 16432
221 Ga0496123_0000644 3300048926 Bacteria 58184
222 Ga0496123_0003818 3300048926 Bacteria 16443
223 Ga0496123_0009754 3300048926 Bacteria 8588
224 Ga0496124_0000047 3300048927 Bacteria 285554
225 Ga0496124_0003219 3300048927 Bacteria 20170
226 Ga0496124_0005382 3300048927 Bacteria 14450
227 Ga0496124_0009886 3300048927 Bacteria 9753
228 Ga0496124_0063833 3300048927 Bacteria 3076
229 Ga0496124_0144800 3300048927 Bacteria 1871
230 Ga0496125_0000236 3300048928 Bacteria 113354
231 Ga0496125_0001543 3300048928 Bacteria 32956
232 Ga0496125_0012812 3300048928 Bacteria 8289
233 Ga0496125_0061096 3300048928 Bacteria 3024
234 Ga0496126_0004787 3300048929 Bacteria 15917
235 Ga0496126_0018705 3300048929 Bacteria 6855
236 Ga0495678_003526 3300049459 Bacteria 9609
237 Ga0501222_000108 3300049662 Bacteria 19450
238 Ga0501227_000041 3300049665 Bacteria 18256
239 Ga0501226_000008 3300049853 Bacteria 199119
240 Ga0501226_000783 3300049853 Bacteria 4276
241 nmdc:mga0sz30_1171_c2 3300050516 Bacteria 7698
242 Ga0500618_000801 3300053125 Bacteria 17358
243 Ga0500659_0000827 3300053135 Bacteria 19769
244 2511252621 2511231004 Bacteria 6669789
245 2511289846 2511231010 Bacteria 6373152
246 2511294348 2511231011 Bacteria 6149768
247 2511325068 2511231016 Bacteria 6704427
248 2511364253 2511231022 Bacteria 6719296
249 2511367393 2511231023 Bacteria 6808468
250 2511416466 2511231031 Bacteria 6558529
251 2511827828 2511231156 Bacteria 6845832
252 2554816055 2554235132 Bacteria 6772433
253 2597861051 2597489887 Bacteria 6666321
254 2599329686 2599185155 Bacteria 5827168
255 2599487176 2599185185 Bacteria 6652270
256 2599907203 2599185292 Bacteria 6290804
257 2599962225 2599185305 Bacteria 6748700
258 2599969035 2599185306 Bacteria 6637356
259 2599974585 2599185307 Bacteria 6194719
260 2599980292 2599185308 Bacteria 6621546
261 2600014104 2599185314 Bacteria 6621749
262 2600446046 2600254954 Bacteria 5100516
263 2601798382 2600255318 Bacteria 6383414
264 2601799146 2600255318 Bacteria 6383414
265 2602008147 2600255389 Bacteria 5275336
266 2606077276 2603880185 Bacteria 6379190
267 2606078045 2603880185 Bacteria 6379190
268 2606129478 2603880199 Bacteria 6377649
269 2606129774 2603880199 Bacteria 6377649
270 2608382421 2606217733 Bacteria 6360972
271 2624483585 2623620443 Bacteria 6427864
272 2643843120 2643221565 Bacteria 6216018
273 2643980514 2643221594 Bacteria 5811388
274 2644124774 2643221621 Bacteria 6212786
275 2644283029 2643221650 Bacteria 7029547
276 2652544456 2651869719 Bacteria 6047974
277 2678266337 2675903515 Bacteria 6580491
278 2715749660 2713897148 Bacteria 5883533
279 2715754670 2713897149 Bacteria 6506249
280 2715756708 2713897149 Bacteria 6506249
281 2718636785 2718217725 Bacteria 5758958
282 2729146808 2728369097 Bacteria 4333476
283 2738691675 2738541271 Bacteria 5657310
284 2739267449 2738543016 Bacteria 5657564
285 2739312330 2738543025 Bacteria 6600348
286 2745007567 2744054620 Bacteria 6551379
287 2774136358 2773857673 Bacteria 6513460
288 2784261643 2784132063 Bacteria 6262788
289 2808905978 2808606373 Bacteria 4423627
290 2808959906 2808606382 Bacteria 6841132
291 2809032169 2808606395 Bacteria 6020352
292 2809217392 2808606445 Bacteria 6057339
293 2819636747 2818991452 Bacteria 8442785
294 2819655301 2818991456 Bacteria 6123676
295 2825654881 2825651385 Bacteria 6715909
296 2842833633 2842832357 Bacteria 5959113
297 2842834963 2842832357 Bacteria 5959113
298 2842845860 2842843487 Bacteria 6004777
299 2844669681 2844665904 Bacteria 6817974
300 2852659984 2852657418 Bacteria 6472974
301 2878029588 2878029506 Bacteria 6418441
302 2878032621 2878029506 Bacteria 6418441
303 2880236171 2880230671 Bacteria 6140320
304 2904518780 2904518522 Bacteria 6068986
305 2919065338 2919063839 Bacteria 6302690
306 2919159498 2919155634 Bacteria 4860545
307 2919389022 2919385768 Bacteria 5897293
308 2919487949 2919487758 Bacteria 5929766
309 2923589192 2923586266 Bacteria 6565975
310 2928178570 2928170801 Bacteria 8785406
311 2928967970 2928963466 Bacteria 5165703
312 2939656815 2939651529 Bacteria 5895393
313 2947237014 2947233263 Bacteria 6439278
314 2969310390 2969304461 Bacteria 6601805
315 2974293910 2974289157 Bacteria 6080362
316 2998139919 2998139840 Bacteria 6073514
317 2998143161 2998139840 Bacteria 6073514
318 3007421776 3007419365 Bacteria 7026924
319 3007615779 3007614139 Bacteria 6053559
320 3007719602 3007718800 Bacteria 5971527
321 3007803467 3007803356 Bacteria 5931491
322 3007806503 3007803356 Bacteria 5931491
323 3007859363 3007855910 Bacteria 5637581
324 3007864933 3007861166 Bacteria 6045338
325 3007871517 3007866637 Bacteria 5899198
326 3007873841 3007872151 Bacteria 5268868
327 8021122457 8021120328 Bacteria 8782274
328 8029995335 8029995093 Bacteria 5990776
329 8034965350 8034962539 Bacteria 4884839
330 8052497847 8052494512 Bacteria 5765634
331 8056118125 8056115690 Bacteria 5527654
332 8056140450 8056137416 Bacteria 6147080
333 8056146656 8056143049 Bacteria 6307666
334 8056171134 8056166840 Bacteria 5820959
335 8056570641 8056569372 Bacteria 5997322
336 Ga0105244_10002489
337 JGI25162J39368_1000058
338 JGI25162J39368_1000134
339 JGI25164J39214_1000108
340 JGI25165J46597_1000220
341 Ga0055532_1000263
342 Ga0055527_1000239
343 Ga0055535_1000509
344 Ga0055542_1002093
345 Ga0055536_1000262
346 Ga0055536_1000302
347 Ga0055536_1005988
348 Ga0055530_10001054
349 Ga0055530_10001072
350 Ga0055540_1000759
351 Ga0055540_1001301
352 Ga0055531_10000423
353 Ga0065714_10002305
354 Ga0065714_10069363
355 Ga0065704_10070623
356 Ga0065704_10077601
357 Ga0070669_100000281
358 Ga0075436_100010435
359 Ga0099823_1000001
360 Ga0079104_1000399
361 Ga0099826_10000444
362 Ga0105251_10005034
363 Ga0105251_10007194
364 Ga0105251_10018448
365 Ga0105251_10024610
366 Ga0105251_10026226
367 Ga0105251_10026706
368 Ga0105244_10007943
369 Ga0105243_10000803
370 Ga0105243_10003844
371 Ga0157371_10000053
372 Ga0157371_10006759
373 Ga0157370_10264341
374 Ga0157372_10007774
375 Ga0157372_10035855
376 Ga0157375_10002445
377 Ga0182008_10008756
378 Ga0182008_10012113
379 Ga0182008_10023140
380 Ga0182006_1001925
381 Ga0182006_1005037
382 Ga0182006_1018987
383 Ga0182007_10001483
384 Ga0182005_1000389
385 Ga0209760_100045
386 Ga0209566_100469
387 Ga0209674_101668
388 Ga0209672_100026
389 Ga0209147_100033
390 Ga0209563_101534
391 Ga0207427_100006
392 Ga0209437_100013
393 Ga0209258_100051
394 Ga0209148_1000499
395 Ga0209759_1001661
396 Ga0209233_1000022
397 Ga0209455_1000410
398 Ga0209675_1009078
399 Ga0209676_1000015
400 Ga0209676_1000030
401 Ga0209676_1000041
402 Ga0209676_1000050
403 Ga0209676_1006360
404 Ga0209050_1000030
405 Ga0209050_1000553
406 Ga0209051_1000012
407 Ga0209051_1000519
408 Ga0209051_1009458
409 Ga0209257_1000143
410 Ga0207696_1000081
411 Ga0207696_1000204
412 Ga0207696_1001870
413 Ga0207696_1002404
414 Ga0207655_1000116
415 Ga0207655_1002070
416 Ga0207655_1002456
417 Ga0207655_1009940
418 Ga0207655_1010016
419 Ga0207655_1014423
420 Ga0207655_1024447
421 Ga0207713_1001457
422 Ga0207713_1002423
423 Ga0207713_1003558
424 Ga0207713_1005839
425 Ga0207713_1006228
426 Ga0207713_1011067
427 Ga0207713_1018005
428 Ga0207713_1022138
429 Ga0207681_10000209
430 Ga0207709_10000061
431 Ga0207709_10006804
432 Ga0209281_1000091
433 Ga0209281_1001279
434 Ga0209281_1002620
435 Ga0209389_1000007
436 Ga0268266_10005131
437 Ga0307511_10009890
438 Ga0316179_1100687
439 Ga0316178_1047147
440 Ga0307408_100000615
441 Ga0307408_100002064
442 Ga0307408_100002160
443 Ga0307405_10000201
444 Ga0307406_10000331
445 Ga0307407_10002974
446 Ga0307412_10000498
447 Ga0307412_10000607
448 Ga0307414_10003609
449 Ga0307414_10017288
450 Ga0307411_10003655
451 Ga0237819_01649
452 Ga0439447_000479
453 Ga0439447_001532
454 Ga0439447_010687
455 Ga0439466_0000603
456 Ga0439466_0004201
457 Ga0439466_0006969
458 Ga0439432_000044
459 Ga0439432_000112
460 Ga0439432_003615
461 Ga0439451_001925
462 Ga0439452_002480
463 Ga0439452_004126
464 Ga0439452_010490
465 Ga0439452_010656
466 Ga0439456_000212
467 Ga0439456_002055
468 Ga0450911_000016
469 Ga0450911_002274
470 Ga0450900_001573
471 Ga0450902_000396
472 Ga0450904_000163
473 Ga0450905_000056
474 Ga0450905_002667
475 Ga0450906_000046
476 Ga0450907_000212
477 Ga0450910_000931
478 Ga0439446_0000530
479 Ga0450901_000268
480 Ga0495627_000010
481 Ga0495590_0000037
482 Ga0495590_0000347
483 Ga0495590_0022722
484 Ga0495591_000061
485 Ga0495591_004080
486 Ga0495638_0002398
487 Ga0495638_0007256
488 Ga0495638_0043829
489 Ga0495653_0004742
490 Ga0495605_0002058
491 Ga0495584_0015920
492 Ga0495585_0000543
493 Ga0495585_0007965
494 Ga0495607_0000504
495 Ga0495607_0000560
496 Ga0495607_0003538
497 Ga0495607_0039866
498 Ga0495606_0002126
499 Ga0495606_0004428
500 Ga0495606_0004503
501 Ga0495606_0004506
502 Ga0495606_0004687
503 Ga0495610_0001528
504 Ga0495620_0000104
505 Ga0495620_0000807
506 Ga0495631_0009189
507 Ga0495632_0000213
508 Ga0495632_0000861
509 Ga0495632_0001181
510 Ga0495637_0000041
511 Ga0495637_0000397
512 Ga0495637_0000520
513 Ga0495637_0000664
514 Ga0495637_0023099
515 Ga0495643_0001157
516 Ga0495648_0000178
517 Ga0495648_0001759
518 Ga0495654_0000071
519 Ga0495654_0000720
520 Ga0495654_0002013
521 Ga0495609_0000499
522 Ga0495609_0011695
523 Ga0495597_0000047
524 Ga0495597_0000137
525 Ga0495597_0001292
526 Ga0495661_0000528
527 Ga0495661_0001923
528 Ga0495661_0004639
529 Ga0495649_0000043
530 Ga0495649_0000530
531 Ga0495649_0001066
532 Ga0495649_0001780
533 Ga0495660_0000590
534 Ga0495660_0002324
535 Ga0495660_0009409
536 Ga0495683_0003942
537 Ga0495675_0000832
538 Ga0495673_0002845
539 Ga0495681_0022518
540 Ga0495686_0004484
541 Ga0495593_0000001
542 Ga0495626_0000871
543 Ga0495626_0001700
544 Ga0496110_0009812
545 Ga0496116_0002174
546 Ga0496117_0000133
547 Ga0496117_0001039
548 Ga0496117_0001487
549 Ga0496118_0002404
550 Ga0496118_0006193
551 Ga0496119_0057820
552 Ga0496120_0007616
553 Ga0496121_0013999
554 Ga0496122_0000350
555 Ga0496122_0004827
556 Ga0496123_0000644
557 Ga0496123_0003818
558 Ga0496123_0009754
559 Ga0496124_0000047
560 Ga0496124_0003219
561 Ga0496124_0005382
562 Ga0496124_0009886
563 Ga0496124_0063833
564 Ga0496124_0144800
565 Ga0496125_0000236
566 Ga0496125_0001543
567 Ga0496125_0012812
568 Ga0496125_0061096
569 Ga0496126_0004787
570 Ga0496126_0018705
571 Ga0495678_003526
572 Ga0501222_000108
573 Ga0501227_000041
574 Ga0501226_000008
575 Ga0501226_000783
576 nmdc:mga0sz30_1171_c2
577 Ga0500618_000801
578 Ga0500659_0000827
579 2511252621
580 2511289846
581 2511294348
582 2511325068
583 2511364253
584 2511367393
585 2511416466
586 2511827828
587 2554816055
588 2597861051
589 2599329686
590 2599487176
591 2599907203
592 2599962225
593 2599969035
594 2599974585
595 2599980292
596 2600014104
597 2600446046
598 2601798382
599 2601799146
600 2602008147
601 2606077276
602 2606078045
603 2606129478
604 2606129774
605 2608382421
606 2624483585
607 2643843120
608 2643980514
609 2644124774
610 2644283029
611 2652544456
612 2678266337
613 2715749660
614 2715754670
615 2715756708
616 2718636785
617 2729146808
618 2738691675
619 2739267449
620 2739312330
621 2745007567
622 2774136358
623 2784261643
624 2808905978
625 2808959906
626 2809032169
627 2809217392
628 2819636747
629 2819655301
630 2825654881
631 2842833633
632 2842834963
633 2842845860
634 2844669681
635 2852659984
636 2878029588
637 2878032621
638 2880236171
639 2904518780
640 2919065338
641 2919159498
642 2919389022
643 2919487949
644 2923589192
645 2928178570
646 2928967970
647 2939656815
648 2947237014
649 2969310390
650 2974293910
651 2998139919
652 2998143161
653 3007421776
654 3007615779
655 3007719602
656 3007803467
657 3007806503
658 3007859363
659 3007864933
660 3007871517
661 3007873841
662 8021122457
663 8029995335
664 8034965350
665 8052497847
666 8056118125
667 8056140450
668 8056146656
669 8056171134
670 8056570641

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05947

T6SS_TssF

Type VI secretion system, TssF

34

626

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
6n38-assembly1.cif.gz_H structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.8278 41 586
6n38-assembly1.cif.gz_H structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.8118 41 586
6n38-assembly1.cif.gz_I structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.8034 43 593
6n38-assembly1.cif.gz_I structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.7992 43 593
5k36-assembly1.cif.gz_K structure of an eleven component nuclear rna exosome complex bound to rna 0.6922 512 541
ID Description Score Start End Superfamily
4bqqB02 Alpha Beta;Alpha-Beta Complex;Hect, E3 ligase catalytic domain fold;Putative Large Serine Recombinase; Chain B, Domain 2 0.696 512 541 3.90.1750.20
af_Q54H99_9_164_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.6816 129 154 3.50.50.60
5b53A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.5867 503 537 3.40.50.1100
2d8bA01 Alpha Beta;3-Layer(aba) Sandwich;Severin;Severin 0.5744 515 555 3.40.20.10
af_Q4DT86_2_118_3.30.300.130 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;Fe-S cluster assembly (FSCA) 0.5659 505 580 3.30.300.130
ID Description Score Start End GO Terms
AF-Q87U80-F1-model_v4 Type VI secretion system baseplate subunit TssF 0.9858 79 595
AF-Q87U80-F1-model_v4 Type VI secretion system baseplate subunit TssF 0.9839 79 595
AF-A0A2R7SPP5-F1-model_v4 deleted 0.9741 169 595
AF-A8DWD0-F1-model_v4 Uncharacterized protein 0.974 153 433
AF-A0A2N1WV43-F1-model_v4 deleted 0.9731 109 537

Map