F412060

General Info

Members Datasets Scaffolds Average Seq Length
335 228 265 191

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10050292|rootH1_100502923
Length 213
Sequence VVQGGAELADEVGFEQVTVSALARRFDVTVASLYSHVKNSQDLRVRIALLALEELADRGAVALAGRAGKDALSALGNVYRDYAREHPGRYAAAQLRLSPEEAARSAGLRHSLMMRAVLRGYDLVEPDQTHAVRLLGSVFHGFVSLEAGGGFSHSAPESGESWARVLDALDSLLCNWPAPTAVRRTGLFSGPGWPRAGSRRPRRRGRSAWSGRG

Samples

Sample ID Description Type Environment
1 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
2 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
3 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
4 2643221647 Streptomyces sp. Root369 Isolate Unclassified
5 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
6 2643221714 Streptomyces sp. Root264 Isolate Unclassified
7 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
8 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
9 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
10 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
11 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
12 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
13 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
14 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
15 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
16 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
17 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
18 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
19 2855683550 Micromonospora sp. RP3T Isolate Unclassified
20 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
21 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
22 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
23 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
24 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
25 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
26 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
27 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
28 2867369537 Streptomyces sp. Z26 Isolate Unclassified
29 2867428634 Streptomyces sp. RP5T Isolate Unclassified
30 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
31 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
32 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
33 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
34 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
35 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
36 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
37 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
38 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
39 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
40 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
41 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
42 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
43 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
44 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
45 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
46 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
47 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
48 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
49 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
50 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
51 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
52 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
53 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
54 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
55 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
56 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
57 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
58 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
59 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
60 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
61 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
62 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
63 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
64 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
65 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
66 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
67 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
68 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
69 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
70 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
71 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
75 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
76 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
77 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
78 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
81 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
82 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
83 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
84 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
85 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
86 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
89 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
90 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
91 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
92 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
93 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
94 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
95 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
96 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
97 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
98 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
99 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
100 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
101 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
102 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
103 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
104 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
105 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
106 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
107 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
108 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
109 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
110 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
113 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
114 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
115 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
116 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
117 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
118 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
119 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
120 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
121 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
122 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
123 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
124 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
125 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
126 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
127 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
128 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
129 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
130 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
131 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
132 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
133 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
134 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
135 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
136 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
140 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
143 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
144 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
145 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
146 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
147 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
148 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
149 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
150 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
151 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
152 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
153 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
154 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
155 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
156 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
157 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
158 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
159 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
160 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
161 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
162 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
163 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
164 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
165 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
166 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
167 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
168 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
169 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
170 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
171 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
172 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
173 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
174 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
175 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
176 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
177 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
178 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
179 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
180 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
181 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
182 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
183 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
184 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
185 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
186 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
187 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
188 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
189 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
190 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
191 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
192 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
193 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
194 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
196 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
197 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
198 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
201 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
202 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
206 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
207 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
208 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
209 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
210 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
211 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
212 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
213 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
214 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
215 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
216 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
217 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
218 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
219 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
220 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
221 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
222 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
223 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
224 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
225 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
226 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
227 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
228 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.51
Metatranscriptomes 0.6
Isolates 20.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.28
Nodule 0.6
Rhizoplane 1.19
Rhizosphere 79.4
Stem 0
Stem Tuber 0
Unclassified 15.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10043295 3300003316 Bacteria 11693
2 rootH1_10050292 3300003316 Bacteria 1711
3 rootL2_10039493 3300003322 Bacteria 2616
4 rootL2_10093646 3300003322 Bacteria 8232
5 rootH1_10034620 3300003323 Bacteria 2681
6 rootH1_10043323 3300003323 Bacteria 7712
7 Ga0006562J51391_1080637 3300003578 Bacteria 1154
8 Ga0006562J51391_1094205 3300003578 Bacteria 1970
9 Ga0070668_100000284 3300005347 Bacteria 33650
10 Ga0070663_100001246 3300005455 Bacteria 13999
11 Ga0075365_10002919 3300006038 Bacteria 8630
12 Ga0075368_10001580 3300006042 Bacteria 7310
13 Ga0075363_100029048 3300006048 Bacteria 2851
14 Ga0075367_10002607 3300006178 Bacteria 8283
15 Ga0105243_11391566 3300009148 Bacteria 722
16 Ga0105243_12059786 3300009148 Bacteria 606
17 Ga0157375_10201727 3300013308 Bacteria 2145
18 Ga0157375_11424921 3300013308 Bacteria 816
19 Ga0182008_10001956 3300014497 Bacteria 13238
20 Ga0182006_1050286 3300015261 Bacteria 1606
21 Ga0182007_10000163 3300015262 Bacteria 46066
22 Ga0183367_1022 3300015688 Bacteria 55022
23 Ga0207709_10202462 3300025935 Bacteria 1419
24 Ga0207678_10001383 3300026067 Bacteria 22317
25 Ga0209813_10011223 3300027866 Bacteria 2337
26 Ga0307515_10313934 3300028794 Bacteria 1240
27 Ga0307511_10164282 3300030521 Bacteria 1237
28 Ga0307512_10020534 3300030522 Bacteria 5972
29 Ga0307512_10036117 3300030522 Bacteria 4197
30 Ga0307513_10553882 3300031456 Bacteria 862
31 Ga0307508_10007544 3300031616 Bacteria 10101
32 Ga0307508_10060834 3300031616 Bacteria 3338
33 Ga0307514_10307708 3300031649 Bacteria 882
34 Ga0307516_10006155 3300031730 Bacteria 14137
35 Ga0307507_10357304 3300033179 Bacteria 855
36 Ga0395900_0348874 3300037418 Bacteria 1454
37 Ga0395898_0001086 3300037466 Bacteria 42022
38 Ga0395898_0009854 3300037466 Bacteria 10013
39 Ga0395905_0120156 3300037471 Bacteria 2470
40 Ga0395901_0319313 3300038443 Bacteria 1607
41 Ga0439436_0094192 3300041404 Bacteria 834
42 Ga0451837_0258535 3300041494 Bacteria 5488
43 Ga0451853_0215312 3300041512 Bacteria 768
44 Ga0451853_0989110 3300041512 Bacteria 6313
45 Ga0439442_032451 3300042002 Bacteria 1091
46 Ga0439432_027158 3300042006 Bacteria 1871
47 Ga0450894_001412 3300042131 Bacteria 3466
48 Ga0450895_017151 3300042132 Bacteria 654
49 Ga0450898_002117 3300042134 Bacteria 2739
50 Ga0450899_000304 3300042135 Bacteria 5377
51 Ga0450903_000060 3300042138 Bacteria 22296
52 Ga0450906_000463 3300042145 Bacteria 8492
53 Ga0439458_0000671 3300042157 Bacteria 8815
54 Ga0450908_033667 3300042184 Bacteria 888
55 Ga0466969_0024021 3300044656 Bacteria 3136
56 Ga0466972_0038409 3300044658 Bacteria 2339
57 Ga0466965_0011249 3300044683 Bacteria 4190
58 Ga0466965_0021267 3300044683 Bacteria 3121
59 Ga0466966_0001536 3300044684 Bacteria 14804
60 Ga0466966_0090853 3300044684 Bacteria 1896
61 Ga0466961_0000810 3300044693 Bacteria 19479
62 Ga0466963_0000559 3300044694 Bacteria 17537
63 Ga0466964_0002910 3300044706 Bacteria 6183
64 Ga0466971_0003262 3300044719 Bacteria 6923
65 Ga0466971_0046187 3300044719 Bacteria 1957
66 Ga0466970_0001603 3300044765 Bacteria 10912
67 Ga0466970_0039172 3300044765 Bacteria 2515
68 Ga0466970_0324678 3300044765 Bacteria 870
69 Ga0466957_0001809 3300044842 Bacteria 11266
70 Ga0466960_0027380 3300044901 Bacteria 2599
71 Ga0466959_0015603 3300045049 Bacteria 5538
72 Ga0466958_0000296 3300045836 Bacteria 19530
73 Ga0466967_0008653 3300045976 Bacteria 7484
74 Ga0466967_0015242 3300045976 Bacteria 6022
75 Ga0466967_0340263 3300045976 Bacteria 1451
76 Ga0495592_0033900 3300046454 Bacteria 3850
77 Ga0495592_0089637 3300046454 Bacteria 2208
78 Ga0495603_0002568 3300046455 Bacteria 10711
79 Ga0495603_0006856 3300046455 Bacteria 6833
80 Ga0495603_0008069 3300046455 Bacteria 6360
81 Ga0495603_0015850 3300046455 Bacteria 4555
82 Ga0495603_0047834 3300046455 Bacteria 2546
83 Ga0495629_0006860 3300046459 Bacteria 8408
84 Ga0495629_0008982 3300046459 Bacteria 7335
85 Ga0495629_0037791 3300046459 Bacteria 3402
86 Ga0495629_0046705 3300046459 Bacteria 3037
87 Ga0495629_0049344 3300046459 Bacteria 2950
88 Ga0495629_0055794 3300046459 Bacteria 2763
89 Ga0495638_0165102 3300046460 Bacteria 1274
90 Ga0495638_0216467 3300046460 Bacteria 1073
91 Ga0495651_0023969 3300046462 Bacteria 4747
92 Ga0495651_0072336 3300046462 Bacteria 2619
93 Ga0495651_0224968 3300046462 Bacteria 1296
94 Ga0495651_0479256 3300046462 Bacteria 799
95 Ga0495653_0004386 3300046463 Bacteria 11405
96 Ga0495580_0607519 3300046472 Bacteria 722
97 Ga0495582_0409054 3300046473 Bacteria 783
98 Ga0495605_0006630 3300046474 Bacteria 6630
99 Ga0495605_0063858 3300046474 Bacteria 1755
100 Ga0495664_0001319 3300046477 Bacteria 13031
101 Ga0495585_0057272 3300046492 Bacteria 2151
102 Ga0495594_0026023 3300046499 Bacteria 3146
103 Ga0495594_0123441 3300046499 Bacteria 1464
104 Ga0495596_0070165 3300046500 Bacteria 1362
105 Ga0495607_0045806 3300046501 Bacteria 2570
106 Ga0495607_0062217 3300046501 Bacteria 2117
107 Ga0495583_0016077 3300046506 Bacteria 4039
108 Ga0495583_0089525 3300046506 Bacteria 1327
109 Ga0495583_0116742 3300046506 Bacteria 1126
110 Ga0495606_0008905 3300046507 Bacteria 8596
111 Ga0495608_0027396 3300046511 Bacteria 3877
112 Ga0495610_0074117 3300046512 Bacteria 1580
113 Ga0495616_0034335 3300046513 Bacteria 2635
114 Ga0495620_0010485 3300046515 Bacteria 4889
115 Ga0495620_0016361 3300046515 Bacteria 3723
116 Ga0495628_0055439 3300046516 Bacteria 3122
117 Ga0495628_0057859 3300046516 Bacteria 3049
118 Ga0495628_0241959 3300046516 Bacteria 1349
119 Ga0495628_0275190 3300046516 Bacteria 1251
120 Ga0495630_0012682 3300046517 Bacteria 6124
121 Ga0495630_0807364 3300046517 Bacteria 716
122 Ga0495631_0016538 3300046518 Bacteria 3513
123 Ga0495644_0142487 3300046523 Bacteria 916
124 Ga0495644_0236563 3300046523 Bacteria 708
125 Ga0495648_0051394 3300046524 Bacteria 2512
126 Ga0495666_0002088 3300046526 Bacteria 9896
127 Ga0495666_0014009 3300046526 Bacteria 3999
128 Ga0495642_0064235 3300046528 Bacteria 1527
129 Ga0495642_0353703 3300046528 Bacteria 646
130 Ga0495652_0063460 3300046529 Bacteria 3110
131 Ga0495654_0038071 3300046530 Bacteria 2407
132 Ga0495665_0014555 3300046531 Bacteria 4242
133 Ga0495640_0013219 3300046533 Bacteria 6277
134 Ga0495640_0018439 3300046533 Bacteria 5173
135 Ga0495640_0325721 3300046533 Bacteria 951
136 Ga0495586_0151846 3300046535 Bacteria 1303
137 Ga0495587_0336970 3300046536 Bacteria 841
138 Ga0495587_0336976 3300046536 Bacteria 841
139 Ga0495609_0034654 3300046538 Bacteria 2287
140 Ga0495597_0036888 3300046542 Bacteria 2198
141 Ga0495645_0002788 3300046543 Bacteria 11852
142 Ga0495645_0003210 3300046543 Bacteria 11088
143 Ga0495622_0040275 3300046557 Bacteria 2174
144 Ga0495622_0184567 3300046557 Bacteria 934
145 Ga0495667_0165730 3300046559 Bacteria 1420
146 Ga0495667_0268053 3300046559 Bacteria 1085
147 Ga0495668_0024875 3300046616 Bacteria 3405
148 Ga0495668_0026351 3300046616 Bacteria 3299
149 Ga0495634_0082931 3300046642 Bacteria 2093
150 Ga0495611_0007632 3300046648 Bacteria 4591
151 Ga0495611_0139011 3300046648 Bacteria 1134
152 Ga0495625_0066557 3300046660 Bacteria 2537
153 Ga0495625_0368226 3300046660 Bacteria 904
154 Ga0495635_0043241 3300046663 Bacteria 3109
155 Ga0495635_0080338 3300046663 Bacteria 2231
156 Ga0495635_0278115 3300046663 Bacteria 1124
157 Ga0495661_0100563 3300046665 Bacteria 1628
158 Ga0495588_0010948 3300046674 Bacteria 4242
159 Ga0495588_0259913 3300046674 Bacteria 915
160 Ga0495588_0423109 3300046674 Bacteria 699
161 Ga0495657_0001046 3300046675 Bacteria 24201
162 Ga0495657_0010807 3300046675 Bacteria 6855
163 Ga0495657_0069869 3300046675 Bacteria 2296
164 Ga0495599_0381489 3300046678 Bacteria 841
165 Ga0495623_0184979 3300046679 Bacteria 1207
166 Ga0495646_0062755 3300046680 Bacteria 2208
167 Ga0495613_0001349 3300046689 Bacteria 18713
168 Ga0495613_0005122 3300046689 Bacteria 9834
169 Ga0495613_0018095 3300046689 Bacteria 5250
170 Ga0495613_0029030 3300046689 Bacteria 4112
171 Ga0495613_0041247 3300046689 Bacteria 3418
172 Ga0495624_0090715 3300046690 Bacteria 1885
173 Ga0495649_0017918 3300046694 Bacteria 3991
174 Ga0495649_0189592 3300046694 Bacteria 1070
175 Ga0495649_0202437 3300046694 Bacteria 1030
176 Ga0495589_0006019 3300046794 Bacteria 6406
177 Ga0495589_0007507 3300046794 Bacteria 5712
178 Ga0495589_0074702 3300046794 Bacteria 1653
179 Ga0495589_0214391 3300046794 Bacteria 906
180 Ga0495600_0197325 3300046809 Bacteria 1293
181 Ga0495600_0410500 3300046809 Bacteria 841
182 Ga0495600_0410874 3300046809 Bacteria 841
183 Ga0495660_0109963 3300046810 Bacteria 1407
184 Ga0495581_0025050 3300047315 Bacteria 3457
185 Ga0495581_0048187 3300047315 Bacteria 2461
186 Ga0495604_0001004 3300047317 Bacteria 23493
187 Ga0495604_0075994 3300047317 Bacteria 2527
188 Ga0495636_0006664 3300047318 Bacteria 4540
189 Ga0495636_0012001 3300047318 Bacteria 3434
190 Ga0495676_0003953 3300047321 Bacteria 13491
191 Ga0495676_0018914 3300047321 Bacteria 6068
192 Ga0495676_0035706 3300047321 Bacteria 4156
193 Ga0495676_0089209 3300047321 Bacteria 2310
194 Ga0495676_0269625 3300047321 Bacteria 1155
195 Ga0495680_0014166 3300047322 Bacteria 6923
196 Ga0495683_0112586 3300047323 Bacteria 1298
197 Ga0495687_006077 3300047443 Bacteria 7512
198 Ga0495687_074368 3300047443 Bacteria 1351
199 Ga0495687_122150 3300047443 Bacteria 937
200 Ga0495675_0020533 3300047444 Bacteria 4203
201 Ga0495675_0153659 3300047444 Bacteria 1420
202 Ga0495675_0186271 3300047444 Bacteria 1269
203 Ga0495675_0220702 3300047444 Bacteria 1147
204 Ga0495675_0256138 3300047444 Bacteria 1049
205 Ga0495685_002808 3300047447 Bacteria 5489
206 Ga0495685_006726 3300047447 Bacteria 3776
207 Ga0495685_086226 3300047447 Bacteria 1043
208 Ga0495685_120230 3300047447 Bacteria 862
209 Ga0495681_0082299 3300047470 Bacteria 1435
210 Ga0495684_0073969 3300047471 Bacteria 2588
211 Ga0495686_0151685 3300047472 Bacteria 1360
212 Ga0495593_0020323 3300047673 Bacteria 3719
213 Ga0495593_0251328 3300047673 Bacteria 885
214 Ga0495614_0046663 3300048089 Bacteria 1857
215 Ga0495626_0062419 3300048091 Bacteria 1692
216 Ga0496109_0049304 3300048912 Bacteria 3833
217 Ga0496109_0195932 3300048912 Bacteria 1899
218 Ga0496110_0392729 3300048913 Bacteria 1265
219 Ga0495678_053065 3300049459 Bacteria 1558
220 Ga0495682_0032062 3300049460 Bacteria 1941
221 Ga0501032_0167337 3300049569 Bacteria 1442
222 Ga0501033_0003812 3300049570 Bacteria 12267
223 Ga0501034_0090889 3300049571 Bacteria 3050
224 Ga0501034_0134726 3300049571 Bacteria 2451
225 Ga0501034_0831042 3300049571 Bacteria 815
226 Ga0501036_0055961 3300049572 Bacteria 3341
227 Ga0501036_0094386 3300049572 Bacteria 2528
228 Ga0501037_0001433 3300049573 Bacteria 17506
229 Ga0501037_0027724 3300049573 Bacteria 4185
230 Ga0501038_0021560 3300049574 Bacteria 5781
231 Ga0501038_0046417 3300049574 Bacteria 3766
232 Ga0501039_0044055 3300049575 Bacteria 3446
233 Ga0501039_0266712 3300049575 Bacteria 1346
234 Ga0501039_0348925 3300049575 Bacteria 1163
235 Ga0501042_0013688 3300049578 Bacteria 5525
236 Ga0501042_0027990 3300049578 Bacteria 3967
237 Ga0501043_0030059 3300049579 Bacteria 4267
238 Ga0501046_0168179 3300049580 Bacteria 1646
239 Ga0501046_0369972 3300049580 Bacteria 1038
240 Ga0501047_0012507 3300049581 Bacteria 8037
241 Ga0501047_0020486 3300049581 Bacteria 6349
242 Ga0501047_0163651 3300049581 Bacteria 2096
243 Ga0501047_0187387 3300049581 Bacteria 1933
244 Ga0501048_0001522 3300049582 Bacteria 17578
245 Ga0501048_0042162 3300049582 Bacteria 3268
246 Ga0501070_0322594 3300049586 Bacteria 1256
247 Ga0501073_0080986 3300049589 Bacteria 2258
248 Ga0501074_0014263 3300049590 Bacteria 5779
249 Ga0501035_0032994 3300049822 Bacteria 4709
250 Ga0501035_0048505 3300049822 Bacteria 3808
251 Ga0501035_0491954 3300049822 Bacteria 1010
252 Ga0501044_0001176 3300049823 Bacteria 30996
253 Ga0501044_0010696 3300049823 Bacteria 9955
254 Ga0501044_0150237 3300049823 Bacteria 2312
255 Ga0501044_0154663 3300049823 Bacteria 2273
256 Ga0501044_0439280 3300049823 Bacteria 1213
257 nmdc:mga0yw44_54651_c1 3300050492 Bacteria 2428
258 nmdc:mga04h51_1787_c1 3300050495 Bacteria 5031
259 Ga0495601_0071959 3300053077 Bacteria 2208
260 Ga0495655_0009469 3300053083 Bacteria 1890
261 Ga0500578_0290240 3300053086 Bacteria 973
262 Ga0500644_0091289 3300053088 Bacteria 1140
263 Ga0500614_008753 3300053123 Bacteria 2151
264 Ga0500616_0000913 3300053153 Bacteria 32305
265 Ga0466962_0004753 3300061719 Bacteria 6527

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044683 Ga0466965_0011249 Ga0466965_0011249_2249_2821 173
2 3300053086 Ga0500578_0290240 Ga0500578_0290240_367_936 173
3 3300046455 Ga0495603_0008069 Ga0495603_0008069_1332_1901 174
4 3300046459 Ga0495629_0008982 Ga0495629_0008982_4968_5537 174
5 3300046689 Ga0495613_0001349 Ga0495613_0001349_1619_2188 174
6 3300047321 Ga0495676_0018914 Ga0495676_0018914_3096_3665 174
7 3300047673 Ga0495593_0251328 Ga0495593_0251328_251_820 174
8 3300048089 Ga0495614_0046663 Ga0495614_0046663_85_654 174
9 3300049575 Ga0501039_0266712 Ga0501039_0266712_196_765 175
10 3300049581 Ga0501047_0163651 Ga0501047_0163651_411_980 175
11 3300049823 Ga0501044_0001176 Ga0501044_0001176_15922_16491 175
12 3300005455 Ga0070663_100001246 Ga0070663_10000124611 177
13 3300026067 Ga0207678_10001383 Ga0207678_1000138315 177
14 3300003316 rootH1_10050292 rootH1_100502923 179
15 3300003322 rootL2_10093646 rootL2_100936468 179
16 3300015688 Ga0183367_1022 Ga0183367_102215 179
17 3300049586 Ga0501070_0322594 Ga0501070_0322594_535_1083 179
18 3300028794 Ga0307515_10313934 Ga0307515_103139342 181
19 3300030522 Ga0307512_10036117 Ga0307512_100361172 181
20 iso_pu_bacteria 2816332119 2816424244 183
21 3300046460 Ga0495638_0216467 Ga0495638_0216467_386_940 184
22 iso_pu_bacteria 2857481737 2857485091 184
23 iso_pu_bacteria 2858895516 2858896763 184
24 iso_pu_bacteria 2869061728 2869063037 184
25 iso_pu_bacteria 2869068681 2869069222 184
26 iso_pu_bacteria 2899359706 2899364922 184
27 iso_pu_bacteria 3002998708 3003007496 184
28 iso_pu_bacteria 2547132111 2547409517 185
29 iso_pu_bacteria 2582581313 2585306547 185
30 iso_pu_bacteria 2616644814 2616694409 185
31 iso_pu_bacteria 2643221647 2644263399 185
32 iso_pu_bacteria 2643221678 2644435686 185
33 iso_pu_bacteria 2643221714 2644629487 185
34 iso_pu_bacteria 2744054611 2744954404 185
35 iso_pu_bacteria 2784746768 2785366642 185
36 iso_pu_bacteria 2786546132 2786667714 185
37 iso_pu_bacteria 2791355406 2793980527 185
38 iso_pu_bacteria 2802429296 2804848280 185
39 iso_pu_bacteria 2808606359 2808840496 185
40 iso_pu_bacteria 2808606375 2808917328 185
41 iso_pu_bacteria 2811994879 2812357928 185
42 iso_pu_bacteria 2818991463 2819699215 185
43 iso_pu_bacteria 2852635781 2852636500 185
44 iso_pu_bacteria 2855683550 2855689113 185
45 iso_pu_bacteria 2862382967 2862390058 185
46 iso_pu_bacteria 2862705112 2862705486 185
47 iso_pu_bacteria 2863404153 2863405866 185
48 iso_pu_bacteria 2866612099 2866613760 185
49 iso_pu_bacteria 2867346516 2867351195 185
50 iso_pu_bacteria 2867369537 2867374492 185
51 iso_pu_bacteria 2867428634 2867437312 185
52 iso_pu_bacteria 2868088558 2868090517 185
53 iso_pu_bacteria 2877676314 2877683909 185
54 iso_pu_bacteria 2891395885 2891398251 185
55 iso_pu_bacteria 2891554331 2891555874 185
56 iso_pu_bacteria 2912723979 2912726906 185
57 iso_pu_bacteria 2919468124 2919473059 185
58 iso_pu_bacteria 2928142448 2928146925 185
59 iso_pu_bacteria 2946064051 2946067924 185
60 iso_pu_bacteria 2946072368 2946074492 185
61 iso_pu_bacteria 2947224130 2947229018 185
62 iso_pu_bacteria 2954380949 2954389190 185
63 iso_pu_bacteria 2954673503 2954673854 185
64 iso_pu_bacteria 2954682443 2954690138 185
65 iso_pu_bacteria 2954691527 2954699968 185
66 iso_pu_bacteria 2954701450 2954702250 185
67 iso_pu_bacteria 2954711539 2954718810 185
68 iso_pu_bacteria 2954721474 2954728779 185
69 iso_pu_bacteria 2954731030 2954733031 185
70 iso_pu_bacteria 2954740390 2954747679 185
71 iso_pu_bacteria 2954749733 2954751911 185
72 iso_pu_bacteria 2954759201 2954766801 185
73 iso_pu_bacteria 2966598605 2966604928 185
74 iso_pu_bacteria 2990059506 2990067046 185
75 iso_pu_bacteria 2990088156 2990093809 185
76 iso_pu_bacteria 2997600082 2997602443 185
77 iso_pu_bacteria 8008558824 8008559257 185
78 iso_pu_bacteria 8025413630 8025415221 185
79 iso_pu_bacteria 8047893842 8047903601 185
80 iso_pu_bacteria 8048127548 8048131978 185
81 iso_pu_bacteria 8048356638 8048356865 185
82 iso_pu_bacteria 8048369669 8048378961 185
83 iso_pu_bacteria 8048379754 8048388066 185
84 iso_pu_bacteria 8056829672 8056830545 185
85 3300053153 Ga0500616_0000913 Ga0500616_0000913_31661_32221 186
86 iso_pu_bacteria 2912715099 2912721291 186
87 iso_pu_bacteria 2912757875 2912761712 186
88 iso_pu_bacteria 8025530807 8025538298 186
89 3300006038 Ga0075365_10002919 Ga0075365_100029195 187
90 3300050492 nmdc:mga0yw44_54651_c1 nmdc:mga0yw44_54651_c1_107_673 187
91 3300003323 rootH1_10034620 rootH1_100346205 188
92 3300005347 Ga0070668_100000284 Ga0070668_10000028422 188
93 3300046674 Ga0495588_0259913 Ga0495588_0259913_122_691 188
94 3300047315 Ga0495581_0025050 Ga0495581_0025050_76_645 188
95 3300048912 Ga0496109_0195932 Ga0496109_0195932_898_1464 188
96 3300049575 Ga0501039_0348925 Ga0501039_0348925_554_1123 188
97 iso_pu_bacteria 2811994917 2812483244 188
98 iso_pu_bacteria 2862178590 2862182108 188
99 3300003316 rootH1_10043295 rootH1_1004329512 189
100 3300003322 rootL2_10039493 rootL2_100394934 189
101 3300003323 rootH1_10043323 rootH1_100433237 189
102 3300003578 Ga0006562J51391_1080637 Ga0006562J51391_10806371 189
103 3300003578 Ga0006562J51391_1094205 Ga0006562J51391_10942051 189
104 3300006042 Ga0075368_10001580 Ga0075368_100015805 189
105 3300006048 Ga0075363_100029048 Ga0075363_1000290482 189
106 3300006178 Ga0075367_10002607 Ga0075367_100026075 189
107 3300009148 Ga0105243_11391566 Ga0105243_113915662 189
108 3300009148 Ga0105243_12059786 Ga0105243_120597861 189
109 3300013308 Ga0157375_10201727 Ga0157375_102017272 189
110 3300013308 Ga0157375_11424921 Ga0157375_114249211 189
111 3300014497 Ga0182008_10001956 Ga0182008_100019565 189
112 3300015261 Ga0182006_1050286 Ga0182006_10502863 189
113 3300015262 Ga0182007_10000163 Ga0182007_1000016313 189
114 3300025935 Ga0207709_10202462 Ga0207709_102024622 189
115 3300027866 Ga0209813_10011223 Ga0209813_100112233 189
116 3300030521 Ga0307511_10164282 Ga0307511_101642822 189
117 3300030522 Ga0307512_10020534 Ga0307512_100205344 189
118 3300031456 Ga0307513_10553882 Ga0307513_105538821 189
119 3300031616 Ga0307508_10007544 Ga0307508_100075442 189
120 3300031616 Ga0307508_10060834 Ga0307508_100608342 189
121 3300031649 Ga0307514_10307708 Ga0307514_103077082 189
122 3300031730 Ga0307516_10006155 Ga0307516_1000615513 189
123 3300033179 Ga0307507_10357304 Ga0307507_103573042 189
124 3300037418 Ga0395900_0348874 Ga0395900_0348874_314_883 189
125 3300037466 Ga0395898_0001086 Ga0395898_0001086_3974_4564 189
126 3300037466 Ga0395898_0009854 Ga0395898_0009854_5125_5700 189
127 3300037471 Ga0395905_0120156 Ga0395905_0120156_1016_1606 189
128 3300038443 Ga0395901_0319313 Ga0395901_0319313_873_1463 189
129 3300041404 Ga0439436_0094192 Ga0439436_0094192_11_589 189
130 3300041494 Ga0451837_0258535 Ga0451837_0258535_1457_2026 189
131 3300041512 Ga0451853_0215312 Ga0451853_0215312_139_717 189
132 3300041512 Ga0451853_0989110 Ga0451853_0989110_5219_5797 189
133 3300042002 Ga0439442_032451 Ga0439442_032451_321_896 189
134 3300042006 Ga0439432_027158 Ga0439432_027158_201_776 189
135 3300042131 Ga0450894_001412 Ga0450894_001412_712_1290 189
136 3300042132 Ga0450895_017151 Ga0450895_017151_48_626 189
137 3300042134 Ga0450898_002117 Ga0450898_002117_1041_1619 189
138 3300042135 Ga0450899_000304 Ga0450899_000304_4421_4999 189
139 3300042138 Ga0450903_000060 Ga0450903_000060_10721_11302 189
140 3300042145 Ga0450906_000463 Ga0450906_000463_6726_7304 189
141 3300042157 Ga0439458_0000671 Ga0439458_0000671_5263_5844 189
142 3300042184 Ga0450908_033667 Ga0450908_033667_47_625 189
143 3300044656 Ga0466969_0024021 Ga0466969_0024021_1062_1631 189
144 3300044658 Ga0466972_0038409 Ga0466972_0038409_1702_2292 189
145 3300044683 Ga0466965_0021267 Ga0466965_0021267_2141_2710 189
146 3300044684 Ga0466966_0001536 Ga0466966_0001536_9861_10430 189
147 3300044684 Ga0466966_0090853 Ga0466966_0090853_1209_1784 189
148 3300044693 Ga0466961_0000810 Ga0466961_0000810_1063_1632 189
149 3300044694 Ga0466963_0000559 Ga0466963_0000559_15334_15903 189
150 3300044706 Ga0466964_0002910 Ga0466964_0002910_3318_3887 189
151 3300044719 Ga0466971_0003262 Ga0466971_0003262_2150_2719 189
152 3300044719 Ga0466971_0046187 Ga0466971_0046187_723_1313 189
153 3300044765 Ga0466970_0001603 Ga0466970_0001603_3708_4277 189
154 3300044765 Ga0466970_0039172 Ga0466970_0039172_511_1089 189
155 3300044765 Ga0466970_0324678 Ga0466970_0324678_230_814 189
156 3300044842 Ga0466957_0001809 Ga0466957_0001809_6767_7336 189
157 3300044901 Ga0466960_0027380 Ga0466960_0027380_1438_2022 189
158 3300045049 Ga0466959_0015603 Ga0466959_0015603_3907_4476 189
159 3300045836 Ga0466958_0000296 Ga0466958_0000296_14588_15157 189
160 3300045976 Ga0466967_0008653 Ga0466967_0008653_1818_2387 189
161 3300045976 Ga0466967_0015242 Ga0466967_0015242_3904_4473 189
162 3300045976 Ga0466967_0340263 Ga0466967_0340263_468_1046 189
163 3300046454 Ga0495592_0033900 Ga0495592_0033900_3232_3801 189
164 3300046454 Ga0495592_0089637 Ga0495592_0089637_1270_1878 189
165 3300046455 Ga0495603_0002568 Ga0495603_0002568_436_1005 189
166 3300046455 Ga0495603_0006856 Ga0495603_0006856_5114_5683 189
167 3300046455 Ga0495603_0015850 Ga0495603_0015850_2688_3257 189
168 3300046455 Ga0495603_0047834 Ga0495603_0047834_556_1155 189
169 3300046459 Ga0495629_0006860 Ga0495629_0006860_6485_7054 189
170 3300046459 Ga0495629_0037791 Ga0495629_0037791_2792_3361 189
171 3300046459 Ga0495629_0046705 Ga0495629_0046705_1579_2178 189
172 3300046459 Ga0495629_0049344 Ga0495629_0049344_439_1008 189
173 3300046459 Ga0495629_0055794 Ga0495629_0055794_1079_1702 189
174 3300046460 Ga0495638_0165102 Ga0495638_0165102_487_1056 189
175 3300046462 Ga0495651_0023969 Ga0495651_0023969_78_647 189
176 3300046462 Ga0495651_0072336 Ga0495651_0072336_713_1321 189
177 3300046462 Ga0495651_0224968 Ga0495651_0224968_116_685 189
178 3300046462 Ga0495651_0479256 Ga0495651_0479256_153_722 189
179 3300046463 Ga0495653_0004386 Ga0495653_0004386_3232_3801 189
180 3300046472 Ga0495580_0607519 Ga0495580_0607519_92_706 189
181 3300046473 Ga0495582_0409054 Ga0495582_0409054_68_637 189
182 3300046474 Ga0495605_0006630 Ga0495605_0006630_2095_2694 189
183 3300046474 Ga0495605_0063858 Ga0495605_0063858_150_743 189
184 3300046477 Ga0495664_0001319 Ga0495664_0001319_9232_9801 189
185 3300046492 Ga0495585_0057272 Ga0495585_0057272_352_945 189
186 3300046499 Ga0495594_0026023 Ga0495594_0026023_556_1155 189
187 3300046499 Ga0495594_0123441 Ga0495594_0123441_52_621 189
188 3300046500 Ga0495596_0070165 Ga0495596_0070165_137_730 189
189 3300046501 Ga0495607_0045806 Ga0495607_0045806_383_982 189
190 3300046501 Ga0495607_0062217 Ga0495607_0062217_173_766 189
191 3300046506 Ga0495583_0016077 Ga0495583_0016077_1009_1602 189
192 3300046506 Ga0495583_0089525 Ga0495583_0089525_404_979 189
193 3300046506 Ga0495583_0116742 Ga0495583_0116742_457_1056 189
194 3300046507 Ga0495606_0008905 Ga0495606_0008905_5779_6378 189
195 3300046511 Ga0495608_0027396 Ga0495608_0027396_77_646 189
196 3300046512 Ga0495610_0074117 Ga0495610_0074117_478_1077 189
197 3300046513 Ga0495616_0034335 Ga0495616_0034335_1704_2303 189
198 3300046515 Ga0495620_0010485 Ga0495620_0010485_3275_3868 189
199 3300046515 Ga0495620_0016361 Ga0495620_0016361_377_976 189
200 3300046516 Ga0495628_0055439 Ga0495628_0055439_1116_1724 189
201 3300046516 Ga0495628_0057859 Ga0495628_0057859_1890_2459 189
202 3300046516 Ga0495628_0241959 Ga0495628_0241959_80_649 189
203 3300046516 Ga0495628_0275190 Ga0495628_0275190_260_868 189
204 3300046517 Ga0495630_0012682 Ga0495630_0012682_2280_2849 189
205 3300046517 Ga0495630_0807364 Ga0495630_0807364_77_646 189
206 3300046518 Ga0495631_0016538 Ga0495631_0016538_2817_3416 189
207 3300046523 Ga0495644_0142487 Ga0495644_0142487_166_759 189
208 3300046523 Ga0495644_0236563 Ga0495644_0236563_34_657 189
209 3300046524 Ga0495648_0051394 Ga0495648_0051394_1502_2101 189
210 3300046526 Ga0495666_0002088 Ga0495666_0002088_5622_6191 189
211 3300046526 Ga0495666_0014009 Ga0495666_0014009_2713_3312 189
212 3300046528 Ga0495642_0064235 Ga0495642_0064235_65_658 189
213 3300046528 Ga0495642_0353703 Ga0495642_0353703_57_626 189
214 3300046529 Ga0495652_0063460 Ga0495652_0063460_1790_2398 189
215 3300046530 Ga0495654_0038071 Ga0495654_0038071_1635_2234 189
216 3300046531 Ga0495665_0014555 Ga0495665_0014555_1267_1836 189
217 3300046533 Ga0495640_0013219 Ga0495640_0013219_1790_2359 189
218 3300046533 Ga0495640_0018439 Ga0495640_0018439_534_1157 189
219 3300046533 Ga0495640_0325721 Ga0495640_0325721_261_860 189
220 3300046535 Ga0495586_0151846 Ga0495586_0151846_43_612 189
221 3300046536 Ga0495587_0336970 Ga0495587_0336970_195_764 189
222 3300046536 Ga0495587_0336976 Ga0495587_0336976_78_647 189
223 3300046538 Ga0495609_0034654 Ga0495609_0034654_1644_2243 189
224 3300046542 Ga0495597_0036888 Ga0495597_0036888_631_1230 189
225 3300046543 Ga0495645_0002788 Ga0495645_0002788_8816_9385 189
226 3300046543 Ga0495645_0003210 Ga0495645_0003210_1602_2171 189
227 3300046557 Ga0495622_0040275 Ga0495622_0040275_1020_1619 189
228 3300046557 Ga0495622_0184567 Ga0495622_0184567_226_813 189
229 3300046559 Ga0495667_0165730 Ga0495667_0165730_374_943 189
230 3300046559 Ga0495667_0268053 Ga0495667_0268053_212_820 189
231 3300046616 Ga0495668_0024875 Ga0495668_0024875_2323_2922 189
232 3300046616 Ga0495668_0026351 Ga0495668_0026351_1027_1620 189
233 3300046642 Ga0495634_0082931 Ga0495634_0082931_1338_1907 189
234 3300046648 Ga0495611_0007632 Ga0495611_0007632_2313_2906 189
235 3300046648 Ga0495611_0139011 Ga0495611_0139011_141_734 189
236 3300046660 Ga0495625_0066557 Ga0495625_0066557_1546_2145 189
237 3300046660 Ga0495625_0368226 Ga0495625_0368226_284_877 189
238 3300046663 Ga0495635_0043241 Ga0495635_0043241_2136_2705 189
239 3300046663 Ga0495635_0080338 Ga0495635_0080338_197_805 189
240 3300046663 Ga0495635_0278115 Ga0495635_0278115_478_1047 189
241 3300046665 Ga0495661_0100563 Ga0495661_0100563_866_1465 189
242 3300046674 Ga0495588_0010948 Ga0495588_0010948_56_625 189
243 3300046674 Ga0495588_0423109 Ga0495588_0423109_117_686 189
244 3300046675 Ga0495657_0001046 Ga0495657_0001046_11393_11962 189
245 3300046675 Ga0495657_0010807 Ga0495657_0010807_3055_3624 189
246 3300046675 Ga0495657_0069869 Ga0495657_0069869_1289_1912 189
247 3300046678 Ga0495599_0381489 Ga0495599_0381489_78_647 189
248 3300046679 Ga0495623_0184979 Ga0495623_0184979_217_786 189
249 3300046680 Ga0495646_0062755 Ga0495646_0062755_46_615 189
250 3300046689 Ga0495613_0005122 Ga0495613_0005122_5357_5926 189
251 3300046689 Ga0495613_0018095 Ga0495613_0018095_1480_2049 189
252 3300046689 Ga0495613_0029030 Ga0495613_0029030_3120_3743 189
253 3300046689 Ga0495613_0041247 Ga0495613_0041247_1236_1805 189
254 3300046690 Ga0495624_0090715 Ga0495624_0090715_26_634 189
255 3300046694 Ga0495649_0017918 Ga0495649_0017918_3010_3603 189
256 3300046694 Ga0495649_0189592 Ga0495649_0189592_324_893 189
257 3300046694 Ga0495649_0202437 Ga0495649_0202437_366_965 189
258 3300046794 Ga0495589_0006019 Ga0495589_0006019_4544_5143 189
259 3300046794 Ga0495589_0007507 Ga0495589_0007507_2938_3531 189
260 3300046794 Ga0495589_0074702 Ga0495589_0074702_39_632 189
261 3300046794 Ga0495589_0214391 Ga0495589_0214391_140_709 189
262 3300046809 Ga0495600_0197325 Ga0495600_0197325_396_965 189
263 3300046809 Ga0495600_0410500 Ga0495600_0410500_78_647 189
264 3300046809 Ga0495600_0410874 Ga0495600_0410874_196_765 189
265 3300046810 Ga0495660_0109963 Ga0495660_0109963_802_1395 189
266 3300047315 Ga0495581_0048187 Ga0495581_0048187_1692_2300 189
267 3300047317 Ga0495604_0001004 Ga0495604_0001004_9502_10071 189
268 3300047317 Ga0495604_0075994 Ga0495604_0075994_1607_2176 189
269 3300047318 Ga0495636_0006664 Ga0495636_0006664_639_1208 189
270 3300047318 Ga0495636_0012001 Ga0495636_0012001_1344_1943 189
271 3300047321 Ga0495676_0003953 Ga0495676_0003953_7457_8026 189
272 3300047321 Ga0495676_0035706 Ga0495676_0035706_2584_3192 189
273 3300047321 Ga0495676_0089209 Ga0495676_0089209_579_1178 189
274 3300047321 Ga0495676_0269625 Ga0495676_0269625_232_801 189
275 3300047322 Ga0495680_0014166 Ga0495680_0014166_1431_2039 189
276 3300047323 Ga0495683_0112586 Ga0495683_0112586_615_1208 189
277 3300047443 Ga0495687_006077 Ga0495687_006077_791_1360 189
278 3300047443 Ga0495687_074368 Ga0495687_074368_342_935 189
279 3300047443 Ga0495687_122150 Ga0495687_122150_83_706 189
280 3300047444 Ga0495675_0020533 Ga0495675_0020533_2285_2854 189
281 3300047444 Ga0495675_0153659 Ga0495675_0153659_478_1047 189
282 3300047444 Ga0495675_0186271 Ga0495675_0186271_35_604 189
283 3300047444 Ga0495675_0220702 Ga0495675_0220702_286_894 189
284 3300047444 Ga0495675_0256138 Ga0495675_0256138_49_618 189
285 3300047447 Ga0495685_002808 Ga0495685_002808_4731_5324 189
286 3300047447 Ga0495685_006726 Ga0495685_006726_2241_2834 189
287 3300047447 Ga0495685_086226 Ga0495685_086226_293_862 189
288 3300047447 Ga0495685_120230 Ga0495685_120230_210_809 189
289 3300047470 Ga0495681_0082299 Ga0495681_0082299_21_620 189
290 3300047471 Ga0495684_0073969 Ga0495684_0073969_1942_2511 189
291 3300047472 Ga0495686_0151685 Ga0495686_0151685_441_1040 189
292 3300047673 Ga0495593_0020323 Ga0495593_0020323_933_1556 189
293 3300048091 Ga0495626_0062419 Ga0495626_0062419_651_1250 189
294 3300048912 Ga0496109_0049304 Ga0496109_0049304_1547_2116 189
295 3300048913 Ga0496110_0392729 Ga0496110_0392729_442_1011 189
296 3300049459 Ga0495678_053065 Ga0495678_053065_779_1378 189
297 3300049460 Ga0495682_0032062 Ga0495682_0032062_145_744 189
298 3300049569 Ga0501032_0167337 Ga0501032_0167337_271_843 189
299 3300049570 Ga0501033_0003812 Ga0501033_0003812_10225_10815 189
300 3300049571 Ga0501034_0090889 Ga0501034_0090889_2198_2812 189
301 3300049571 Ga0501034_0134726 Ga0501034_0134726_1609_2208 189
302 3300049571 Ga0501034_0831042 Ga0501034_0831042_199_771 189
303 3300049572 Ga0501036_0055961 Ga0501036_0055961_876_1490 189
304 3300049572 Ga0501036_0094386 Ga0501036_0094386_231_830 189
305 3300049573 Ga0501037_0001433 Ga0501037_0001433_15225_15824 189
306 3300049573 Ga0501037_0027724 Ga0501037_0027724_2232_2846 189
307 3300049574 Ga0501038_0021560 Ga0501038_0021560_395_994 189
308 3300049574 Ga0501038_0046417 Ga0501038_0046417_1417_2031 189
309 3300049575 Ga0501039_0044055 Ga0501039_0044055_2573_3187 189
310 3300049578 Ga0501042_0013688 Ga0501042_0013688_301_900 189
311 3300049578 Ga0501042_0027990 Ga0501042_0027990_777_1391 189
312 3300049579 Ga0501043_0030059 Ga0501043_0030059_1027_1626 189
313 3300049580 Ga0501046_0168179 Ga0501046_0168179_139_738 189
314 3300049580 Ga0501046_0369972 Ga0501046_0369972_83_655 189
315 3300049581 Ga0501047_0012507 Ga0501047_0012507_3686_4258 189
316 3300049581 Ga0501047_0020486 Ga0501047_0020486_3170_3784 189
317 3300049581 Ga0501047_0187387 Ga0501047_0187387_1033_1632 189
318 3300049582 Ga0501048_0001522 Ga0501048_0001522_3952_4551 189
319 3300049582 Ga0501048_0042162 Ga0501048_0042162_2429_3043 189
320 3300049589 Ga0501073_0080986 Ga0501073_0080986_702_1316 189
321 3300049590 Ga0501074_0014263 Ga0501074_0014263_2598_3212 189
322 3300049822 Ga0501035_0032994 Ga0501035_0032994_31_621 189
323 3300049822 Ga0501035_0048505 Ga0501035_0048505_2984_3583 189
324 3300049822 Ga0501035_0491954 Ga0501035_0491954_237_812 189
325 3300049823 Ga0501044_0010696 Ga0501044_0010696_7018_7596 189
326 3300049823 Ga0501044_0150237 Ga0501044_0150237_1154_1726 189
327 3300049823 Ga0501044_0154663 Ga0501044_0154663_14_628 189
328 3300049823 Ga0501044_0439280 Ga0501044_0439280_477_1055 189
329 3300050495 nmdc:mga04h51_1787_c1 nmdc:mga04h51_1787_c1_1587_2165 189
330 3300053077 Ga0495601_0071959 Ga0495601_0071959_194_763 189
331 3300053083 Ga0495655_0009469 Ga0495655_0009469_653_1222 189
332 3300053088 Ga0500644_0091289 Ga0500644_0091289_359_934 189
333 3300053123 Ga0500614_008753 Ga0500614_008753_351_920 189
334 3300061719 Ga0466962_0004753 Ga0466962_0004753_935_1504 189
335 iso_pu_bacteria 3006493962 3006497729 189

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13305

TetR_C_33

Tetracyclin repressor-like, C-terminal domain

72

169

0.92

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

1

47

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zk8-assembly1.cif.gz_B crystal structure of transcriptional regulator from bacillus cereus atcc 14579 0.9328 6 184
1zk8-assembly1.cif.gz_B crystal structure of transcriptional regulator from bacillus cereus atcc 14579 0.9228 6 184
6sy6-assembly1.cif.gz_B tetr in complex with the tetr-binding rna-aptamer k2 0.8048 5 181
2oi8-assembly1.cif.gz_A-2 crystal structure of putative regulatory protein sco4313 0.78 8 179
6fpm-assembly1.cif.gz_A tetr(d) t103a mutant in complex with tetracycline and magnesium 0.7702 5 186
ID Description Score Start End Superfamily
1zk8B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9635 6 49 1.10.10.60
1zk8A02 Mainly Alpha;Orthogonal Bundle;Tetracycline Repressor; domain 2;Tetracycline Repressor, domain 2 0.9461 51 184 1.10.357.10
1zk8B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9433 6 49 1.10.10.60
3fiwD01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9408 9 55 1.10.10.60
3fiwB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9407 9 55 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A560AFQ1-F1-model_v4 deleted 0.9948 19 185
AF-A0A2G7ATT2-F1-model_v4 deleted 0.988 1 189
AF-A0A2U0XHN4-F1-model_v4 deleted 0.9857 1 189
AF-A0A4Q8ARZ3-F1-model_v4 deleted 0.9854 1 187
AF-A0A2E8YTT6-F1-model_v4 TetR family transcriptional regulator 0.9852 6 188 GO:0003677
GO:0006355

Feature Viewer

pLDDT pTM Quality
93.7 0.88 High
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Predicted Structure (AlphaFold2)

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