F412013

General Info

Members Datasets Scaffolds Average Seq Length
334 267 226 459

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2599185307|2599970230
Length 501
Sequence QDIAAHKRARKAGIASFIGTTIEWYDFYAYGIAAALVFGKIFFPADLDPGTATLLSFLTLWAGFIARPVGGIIFGHLGDKIGRKTTLVITLVMMGVATTCIGLLPTYLQIGIWAPIALVVLRVIQGVAVGGEWGGAILIASENAPKGKGILYAAFAQQGSPAGNLLATVVFFGLSALPVTDFMLWGWRIPFLLSAALVIVGMVIRLKLEESDDMKRLMAQKKTVKLPILEVLRDHWQIVLLGAGVLPIIHVTYFKSTFALSWATKELGYAQSTFLSVIIVSLIVQFIAQPFGAILVSRIDMRRAFAFMVIPELILMPAMFFAVETKVYWIAVVGMCLATIPHSMFYGAVGGILARAFPTKVRYSGLSIAYQLCSLLVGGATPVLAQGLLNSTGSIIGVAIASACYALVSLVCMLLLLKRIGHTASELSTAEQADADDLAGEAVAVSTQHAHGQQQIPPDVHSERDDGLNIGLVAEAINSAPVTLAAAASEARCQTPCERHG

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2511231006 Pseudomonas sp. GM17 Isolate Nodule
4 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
5 2513237083 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
6 2554235132 Pseudomonas aeruginosa PGPR2 Isolate Unclassified
7 2554235341 Pseudomonas protegens CHA0 Isolate Rhizosphere
8 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
9 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
10 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
11 2597489887 Pseudomonas chlororaphis aureofaciens 30-84 Isolate Rhizosphere
12 2599185160 Pseudomonas sp. NFPP25 Isolate Rhizoplane
13 2599185161 Pseudomonas sp. NFPP09 Isolate Rhizoplane
14 2599185162 Pseudomonas sp. NFPP10 Isolate Rhizoplane
15 2599185163 Pseudomonas sp. NFPP12 Isolate Rhizoplane
16 2599185164 Pseudomonas sp. NFPP13 Isolate Rhizoplane
17 2599185165 Pseudomonas sp. NFPP18 Isolate Rhizoplane
18 2599185166 Pseudomonas sp. NFPP08 Isolate Rhizoplane
19 2599185168 Pseudomonas sp. NFPP05 Isolate Rhizoplane
20 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
21 2599185181 Pseudomonas sp. NFPP17 Isolate Rhizoplane
22 2599185182 Pseudomonas sp. NFPP19 Isolate Rhizoplane
23 2599185185 Pseudomonas sp. NFPP07 Isolate Rhizoplane
24 2599185186 Pseudomonas sp. NFPP15 Isolate Rhizoplane
25 2599185239 Burkholderia sp. NFACC38-1 Isolate Rhizoplane
26 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
27 2599185307 Pseudomonas sp. NFACC02 Isolate Rhizoplane
28 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
29 2599185356 Pseudomonas sp. NFPP14 Isolate Rhizoplane
30 2600255313 Pseudomonas sp. NFPP16 Isolate Rhizoplane
31 2606217733 Pseudomonas aeruginosa NFHH01 Isolate Rhizoplane
32 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
33 2643221548 Streptomyces sp. Root55 Isolate Unclassified
34 2643221561 Nocardioides sp. Root151 Isolate Unclassified
35 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
36 2643221696 Nocardioides sp. Root140 Isolate Unclassified
37 2667528171 Pseudomonas sp. NFPP22 Isolate Rhizoplane
38 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
39 2740892503 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
40 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
41 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
42 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
43 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
44 2811994881 Pseudomonas sp. SLBN-26 Isolate Unclassified
45 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
46 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
47 2818991452 Burkholderia cepacia 561 Isolate Unclassified
48 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
49 2818991464 Pseudomonas protegens 3295 Isolate Rhizosphere
50 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
51 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
52 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
53 2844665904 Pseudomonas protegens H1F10C Isolate Unclassified
54 2862574272 Streptomyces sp. AcE210 Isolate Nodule
55 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
56 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
57 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
58 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
59 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
60 2885266251 Ralstonia sp. SET104 Isolate Nodule
61 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
62 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
63 2904564687 Burkholderia sp. 571 Isolate Unclassified
64 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
65 2916699645 Acinetobacter ursingii M3 Isolate Unclassified
66 2917070673 Pseudomonas protegens CHA0 Isolate Rhizosphere
67 2922554459 Rhodococcus sp. 66b Isolate Unclassified
68 2923153595 Pseudomonas chlororaphis piscium PCL1391 Isolate Unclassified
69 2923519811 Pseudomonas otitidis SLBN-103 Isolate Rhizosphere
70 2928058823 Ralstonia sp. 1138 Isolate Unclassified
71 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
72 2928163908 Burkholderia sp. 567 Isolate Unclassified
73 2928170801 Burkholderia sp. 572 Isolate Unclassified
74 2928536128 Burkholderia sola 565 Isolate Unclassified
75 2935353572 Pseudomonas protegens TECH19 Isolate Unclassified
76 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
77 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
78 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
79 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
80 3007395558 Pseudomonas chlororaphis PCL1601 Isolate Rhizosphere
81 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
82 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
83 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
84 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
85 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
86 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
87 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
88 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
89 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
90 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
91 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
92 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
93 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
94 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
95 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
96 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
97 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
98 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
99 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
100 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
101 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
102 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
103 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
104 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
105 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
106 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
107 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
108 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
109 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
110 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
111 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
112 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
113 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
114 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
115 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
116 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
117 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
118 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
119 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
120 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
121 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
122 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
123 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
124 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
125 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
126 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
127 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
128 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
129 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
130 3300025207 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
131 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
132 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
134 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
135 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
137 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
138 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
139 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
140 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
141 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
142 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
143 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
144 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
145 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
146 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
147 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
148 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
149 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
150 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
151 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
152 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
154 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
155 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
156 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
157 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
158 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
159 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
160 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
161 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
162 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
163 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
164 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
165 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
166 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
167 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
168 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
169 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
170 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
171 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
172 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
173 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
174 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
175 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
176 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
177 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
178 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
179 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
180 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
181 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
182 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
183 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
184 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
185 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
186 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
187 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
188 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
189 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
190 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
191 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
192 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
193 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
194 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
195 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
196 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
197 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
198 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
199 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
200 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
201 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
202 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
203 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
204 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
205 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
206 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
207 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
208 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
209 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
210 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
211 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
212 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
213 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
214 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
215 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
216 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
217 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
218 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
219 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
220 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
221 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
222 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
223 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
224 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
225 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
226 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
227 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
228 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
229 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
230 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
231 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
232 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
233 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
234 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
235 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
236 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
237 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
238 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
239 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
240 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
241 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
242 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
243 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
244 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
245 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
246 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
247 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
248 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
249 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
250 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
251 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
252 637000220 Pseudomonas protegens Pf-5 Isolate Rhizoplane
253 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
254 8003955200 Paraburkholderia mimosarum LMG 23256 Isolate Nodule
255 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
256 8015687852 Pseudomonas chlororaphis aurantiaca RP4 Isolate Rhizosphere
257 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
258 8020938398 Burkholderia sp. BE12 Isolate Rhizosphere
259 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
260 8020953355 Burkholderia sp. BE24 Isolate Rhizosphere
261 8021120328 Burkholderia sp. LS-044 Isolate Rhizosphere
262 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
263 8039098773 Burkholderia multivorans MSMB612WGS Isolate Unclassified
264 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
265 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
266 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
267 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 67.37
Metatranscriptomes 0.3
Isolates 32.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.47
Nodule 2.99
Rhizoplane 7.19
Rhizosphere 55.09
Stem 0
Stem Tuber 0
Unclassified 18.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000083 3300001915 Bacteria 23755
2 JGI24740J21852_10000951 3300001979 Bacteria 12867
3 JGI25162J39368_1000129 3300002737 Bacteria 83712
4 JGI25154J39366_1005627 3300002738 Bacteria 1962
5 JGI25163J39215_1000688 3300002771 Bacteria 8961
6 JGI25164J39214_1000101 3300002772 Bacteria 83715
7 JGI25406J46586_10002734 3300003203 Bacteria 8307
8 JGI25165J46597_1000150 3300003214 Bacteria 115430
9 Ga0055539_1000062 3300003752 Bacteria 141171
10 Ga0055532_1000019 3300003758 Bacteria 286358
11 Ga0055525_1000275 3300003759 Bacteria 47849
12 Ga0055527_1001570 3300003760 Bacteria 4623
13 Ga0055535_1000014 3300003761 Bacteria 286358
14 Ga0055542_1000588 3300003762 Bacteria 31406
15 Ga0055542_1008206 3300003762 Bacteria 2057
16 Ga0055529_1000086 3300003763 Bacteria 140681
17 Ga0055536_1000232 3300003781 Bacteria 44724
18 Ga0055528_1004524 3300003790 Bacteria 6676
19 Ga0055530_10000390 3300003791 Bacteria 39310
20 Ga0055541_1000254 3300003841 Bacteria 19058
21 Ga0055541_1004733 3300003841 Bacteria 2445
22 Ga0070658_10035813 3300005327 Bacteria 3998
23 Ga0070683_100251233 3300005329 Bacteria 1682
24 Ga0070660_100000926 3300005339 Bacteria 19602
25 Ga0070661_100000054 3300005344 Bacteria 88505
26 Ga0070659_100000050 3300005366 Bacteria 97735
27 Ga0070659_100004271 3300005366 Bacteria 10199
28 Ga0070714_100097473 3300005435 Bacteria 2585
29 Ga0070713_100238264 3300005436 Bacteria 1656
30 Ga0070663_100000010 3300005455 Bacteria 158193
31 Ga0070663_100058500 3300005455 Bacteria 2768
32 Ga0070664_100000005 3300005564 Bacteria 222746
33 Ga0068857_100005116 3300005577 Bacteria 11155
34 Ga0068854_100000032 3300005578 Bacteria 106054
35 Ga0068856_100000054 3300005614 Bacteria 104246
36 Ga0068856_100277080 3300005614 Bacteria 1694
37 Ga0068852_100011302 3300005616 Bacteria 6715
38 Ga0068864_100012118 3300005618 Bacteria 7124
39 Ga0081539_10000162 3300005985 Bacteria 156292
40 Ga0075370_10012512 3300006353 Bacteria 4486
41 Ga0105250_10012021 3300009092 Bacteria 3584
42 Ga0105240_10028949 3300009093 Bacteria 7225
43 Ga0105240_10062821 3300009093 Bacteria 4622
44 Ga0105245_10172785 3300009098 Bacteria 2059
45 Ga0105243_10001328 3300009148 Bacteria 22052
46 Ga0105237_10091431 3300009545 Bacteria 3033
47 Ga0105238_10023122 3300009551 Bacteria 6339
48 Ga0157373_10006041 3300013100 Bacteria 9052
49 Ga0157371_10000103 3300013102 Bacteria 128611
50 Ga0157371_10006974 3300013102 Bacteria 9197
51 Ga0157370_10001099 3300013104 Bacteria 33935
52 Ga0157369_10075187 3300013105 Bacteria 3622
53 Ga0157372_10000151 3300013307 Bacteria 75926
54 Ga0182008_10003343 3300014497 Bacteria 9741
55 Ga0182006_1004418 3300015261 Bacteria 6943
56 Ga0182006_1011511 3300015261 Bacteria 3890
57 Ga0154015_1417986 3300020610 Bacteria 10957
58 Ga0209760_100244 3300025207 Bacteria 22589
59 Ga0209784_100003 3300025224 Bacteria 1379451
60 Ga0209566_100002 3300025225 Bacteria 2614868
61 Ga0209566_100229 3300025225 Bacteria 54760
62 Ga0209566_101350 3300025225 Bacteria 7755
63 Ga0209674_100008 3300025226 Bacteria 1076909
64 Ga0209674_100346 3300025226 Bacteria 27116
65 Ga0209672_100014 3300025228 Bacteria 546252
66 Ga0209672_100023 3300025228 Bacteria 371758
67 Ga0209672_100788 3300025228 Bacteria 15117
68 Ga0209147_100002 3300025229 Bacteria 2158988
69 Ga0209147_100177 3300025229 Bacteria 79824
70 Ga0209147_100194 3300025229 Bacteria 69330
71 Ga0209147_100257 3300025229 Bacteria 49599
72 Ga0209563_100004 3300025230 Bacteria 1814108
73 Ga0209563_102767 3300025230 Bacteria 3839
74 Ga0207427_100014 3300025231 Bacteria 561361
75 Ga0209437_100016 3300025233 Bacteria 710118
76 Ga0209258_100002 3300025242 Bacteria 2158988
77 Ga0209258_100134 3300025242 Bacteria 174683
78 Ga0209258_100183 3300025242 Bacteria 136466
79 Ga0209646_1000019 3300025246 Bacteria 475248
80 Ga0209026_1010544 3300025250 Bacteria 1719
81 Ga0209677_100009 3300025253 Bacteria 749530
82 Ga0209148_1000035 3300025254 Bacteria 548413
83 Ga0209148_1000193 3300025254 Bacteria 115649
84 Ga0209148_1001762 3300025254 Bacteria 9329
85 Ga0209759_1001051 3300025256 Bacteria 18279
86 Ga0209233_1000036 3300025261 Bacteria 561361
87 Ga0209455_1000076 3300025272 Bacteria 284092
88 Ga0209455_1000232 3300025272 Bacteria 70532
89 Ga0209673_1000140 3300025273 Bacteria 157575
90 Ga0209676_1000032 3300025292 Bacteria 469558
91 Ga0209564_1006713 3300025295 Bacteria 6116
92 Ga0209050_1000025 3300025298 Bacteria 528225
93 Ga0209051_1000039 3300025303 Bacteria 319632
94 Ga0209051_1000047 3300025303 Bacteria 293227
95 Ga0207647_10015859 3300025904 Bacteria 5155
96 Ga0207695_10005643 3300025913 Bacteria 16518
97 Ga0207695_10008215 3300025913 Bacteria 13110
98 Ga0207695_10020073 3300025913 Bacteria 7667
99 Ga0207671_10024446 3300025914 Bacteria 4543
100 Ga0207657_10001883 3300025919 Bacteria 22679
101 Ga0207649_10000087 3300025920 Bacteria 78222
102 Ga0207664_10134081 3300025929 Bacteria 2088
103 Ga0207690_10000047 3300025932 Bacteria 116333
104 Ga0207690_10005360 3300025932 Bacteria 7558
105 Ga0207709_10001633 3300025935 Bacteria 15235
106 Ga0207661_10163420 3300025944 Bacteria 1933
107 Ga0207679_10000020 3300025945 Bacteria 225727
108 Ga0207667_10183334 3300025949 Bacteria 2149
109 Ga0207640_10000017 3300025981 Bacteria 208145
110 Ga0207678_10000008 3300026067 Bacteria 168926
111 Ga0207678_10092477 3300026067 Bacteria 2585
112 Ga0207702_10000017 3300026078 Bacteria 222964
113 Ga0207674_10001770 3300026116 Bacteria 27610
114 Ga0207698_10026690 3300026142 Bacteria 4088
115 Ga0209371_1001185 3300027312 Bacteria 18949
116 Ga0268256_1001051 3300030500 Bacteria 18470
117 Ga0307408_100005180 3300031548 Bacteria 8745
118 Ga0307518_10001044 3300031838 Bacteria 20736
119 Ga0307416_100059943 3300032002 Bacteria 3096
120 Ga0307414_10175550 3300032004 Bacteria 1718
121 Ga0395900_0041367 3300037418 Bacteria 4751
122 Ga0395905_0152880 3300037471 Bacteria 2171
123 Ga0395901_0025432 3300038443 Bacteria 6077
124 Ga0436365_1557373 3300039437 Bacteria 4523
125 Ga0436361_0105554 3300039447 Bacteria 8475
126 Ga0439463_000270 3300042016 Bacteria 14288
127 Ga0466957_0062334 3300044842 Bacteria 2290
128 Ga0466958_0112515 3300045836 Bacteria 1700
129 Ga0466967_0006895 3300045976 Bacteria 8114
130 Ga0495592_0012400 3300046454 Bacteria 6473
131 Ga0495603_0000293 3300046455 Bacteria 26615
132 Ga0495603_0006667 3300046455 Bacteria 6929
133 Ga0495590_0030137 3300046457 Bacteria 1901
134 Ga0495591_000713 3300046458 Bacteria 24121
135 Ga0495629_0001352 3300046459 Bacteria 19326
136 Ga0495629_0004568 3300046459 Bacteria 10359
137 Ga0495629_0041334 3300046459 Bacteria 3244
138 Ga0495629_0079168 3300046459 Bacteria 2295
139 Ga0495638_0033133 3300046460 Bacteria 3305
140 Ga0495651_0019062 3300046462 Bacteria 5316
141 Ga0495653_0045125 3300046463 Bacteria 3418
142 Ga0495653_0053326 3300046463 Bacteria 3094
143 Ga0495605_0002796 3300046474 Bacteria 10606
144 Ga0495662_0027511 3300046476 Bacteria 2747
145 Ga0495664_0006932 3300046477 Bacteria 6272
146 Ga0495584_0003000 3300046491 Bacteria 9364
147 Ga0495585_0010919 3300046492 Bacteria 5397
148 Ga0495585_0037327 3300046492 Bacteria 2737
149 Ga0495585_0076577 3300046492 Bacteria 1817
150 Ga0495594_0038337 3300046499 Bacteria 2616
151 Ga0495594_0056673 3300046499 Bacteria 2163
152 Ga0495596_0000394 3300046500 Bacteria 27818
153 Ga0495606_0010161 3300046507 Bacteria 7851
154 Ga0495608_0001033 3300046511 Bacteria 19551
155 Ga0495610_0005801 3300046512 Bacteria 8686
156 Ga0495616_0001552 3300046513 Bacteria 15832
157 Ga0495618_0004886 3300046514 Bacteria 8190
158 Ga0495632_0003372 3300046519 Bacteria 11378
159 Ga0495643_0039112 3300046522 Bacteria 2595
160 Ga0495648_0068406 3300046524 Bacteria 2071
161 Ga0495648_0069866 3300046524 Bacteria 2042
162 Ga0495666_0006827 3300046526 Bacteria 5732
163 Ga0495654_0000832 3300046530 Bacteria 23418
164 Ga0495665_0049604 3300046531 Bacteria 2225
165 Ga0495640_0009814 3300046533 Bacteria 7431
166 Ga0495587_0005171 3300046536 Bacteria 8524
167 Ga0495622_0000079 3300046557 Bacteria 86143
168 Ga0495622_0000929 3300046557 Bacteria 15843
169 Ga0495667_0008167 3300046559 Bacteria 7105
170 Ga0495668_0000128 3300046616 Bacteria 113090
171 Ga0495668_0000945 3300046616 Bacteria 32307
172 Ga0495634_0006799 3300046642 Bacteria 8658
173 Ga0495611_0003125 3300046648 Bacteria 7346
174 Ga0495635_0007001 3300046663 Bacteria 7876
175 Ga0495661_0005652 3300046665 Bacteria 8863
176 Ga0495588_0038763 3300046674 Bacteria 2425
177 Ga0495623_0066277 3300046679 Bacteria 2256
178 Ga0495646_0008646 3300046680 Bacteria 6469
179 Ga0495613_0000824 3300046689 Bacteria 24009
180 Ga0495613_0011451 3300046689 Bacteria 6594
181 Ga0495671_0007199 3300046692 Bacteria 6362
182 Ga0495589_0024159 3300046794 Bacteria 3089
183 Ga0495600_0007191 3300046809 Bacteria 6797
184 Ga0495660_0004609 3300046810 Bacteria 8315
185 Ga0495636_0020956 3300047318 Bacteria 2636
186 Ga0495672_0005105 3300047320 Bacteria 10479
187 Ga0495676_0000004 3300047321 Bacteria 313696
188 Ga0495676_0003537 3300047321 Bacteria 14158
189 Ga0495676_0005426 3300047321 Bacteria 11697
190 Ga0495676_0006052 3300047321 Bacteria 11119
191 Ga0495676_0065842 3300047321 Bacteria 2811
192 Ga0495680_0032716 3300047322 Bacteria 4218
193 Ga0495683_0022141 3300047323 Bacteria 3269
194 Ga0495683_0064817 3300047323 Bacteria 1804
195 Ga0495687_006629 3300047443 Bacteria 7041
196 Ga0495675_0005621 3300047444 Bacteria 7653
197 Ga0495679_000015 3300047446 Bacteria 287256
198 Ga0495673_0004366 3300047469 Bacteria 8874
199 Ga0495673_0010694 3300047469 Bacteria 4973
200 Ga0495681_0032522 3300047470 Bacteria 2625
201 Ga0495686_0020047 3300047472 Bacteria 4461
202 Ga0495593_0009844 3300047673 Bacteria 5546
203 Ga0495602_0009647 3300048088 Bacteria 10030
204 Ga0495614_0006971 3300048089 Bacteria 5047
205 Ga0495614_0012851 3300048089 Bacteria 3672
206 Ga0495614_0020934 3300048089 Bacteria 2827
207 Ga0495626_0000012 3300048091 Bacteria 258483
208 Ga0496102_0015989 3300048905 Bacteria 6550
209 Ga0496116_0004855 3300048919 Bacteria 12682
210 Ga0496117_0003148 3300048920 Bacteria 19681
211 Ga0496117_0009009 3300048920 Bacteria 9389
212 Ga0496117_0044464 3300048920 Bacteria 3217
213 Ga0496118_0000198 3300048921 Bacteria 105857
214 Ga0496118_0095790 3300048921 Bacteria 2025
215 Ga0496121_0007915 3300048924 Bacteria 12711
216 Ga0496122_0010180 3300048925 Bacteria 9744
217 Ga0496125_0002121 3300048928 Bacteria 26658
218 Ga0496125_0065047 3300048928 Bacteria 2892
219 Ga0496125_0084671 3300048928 Bacteria 2406
220 Ga0495678_000949 3300049459 Bacteria 25148
221 Ga0495682_0000222 3300049460 Bacteria 44506
222 Ga0495682_0000276 3300049460 Bacteria 40134
223 Ga0501038_0070325 3300049574 Bacteria 2972
224 nmdc:mga07m45_31336_c1 3300050496 Bacteria 2947
225 nmdc:mga07m45_42830_c1 3300050496 Bacteria 2538
226 nmdc:mga07m45_57250_c1 3300050496 Bacteria 2204

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2802429296 2804849190 406
2 3300005436 Ga0070713_100238264 Ga0070713_1002382642 410
3 3300045976 Ga0466967_0006895 Ga0466967_0006895_5260_6567 413
4 iso_pu_bacteria 2558860112 2558913244 419
5 3300048088 Ga0495602_0009647 Ga0495602_0009647_1310_2632 425
6 3300005455 Ga0070663_100058500 Ga0070663_1000585002 428
7 3300005618 Ga0068864_100012118 Ga0068864_1000121183 428
8 3300009098 Ga0105245_10172785 Ga0105245_101727852 428
9 3300025944 Ga0207661_10163420 Ga0207661_101634201 428
10 3300026067 Ga0207678_10092477 Ga0207678_100924772 428
11 iso_pu_bacteria 2866552031 2866553990 429
12 3300003203 JGI25406J46586_10002734 JGI25406J46586_100027343 431
13 3300005985 Ga0081539_10000162 Ga0081539_10000162117 431
14 iso_pu_bacteria 2558860112 2558914508 431
15 iso_pu_bacteria 2622736605 2623501050 433
16 3300039437 Ga0436365_1557373 Ga0436365_1557373_2046_3383 434
17 iso_pu_bacteria 2791355406 2793979237 434
18 iso_pu_bacteria 2842324504 2842325920 434
19 iso_pu_bacteria 2842348783 2842350198 434
20 iso_pu_bacteria 2842454564 2842454579 434
21 iso_pu_bacteria 8047893842 8047903441 434
22 iso_pu_bacteria 8048356638 8048356697 434
23 iso_pu_bacteria 8055034563 8055037845 434
24 iso_pu_bacteria 8056207758 8056213029 434
25 3300005329 Ga0070683_100251233 Ga0070683_1002512331 435
26 3300031838 Ga0307518_10001044 Ga0307518_100010442 435
27 iso_pu_bacteria 2501025502 2501080001 435
28 iso_pu_bacteria 2510917013 2511087887 435
29 iso_pu_bacteria 2773857762 2774396944 435
30 iso_pu_bacteria 2811994878 2812352837 435
31 iso_pu_bacteria 2870782633 2870784613 435
32 iso_pu_bacteria 2883087390 2883090407 435
33 iso_pu_bacteria 2558860112 2558911505 436
34 iso_pu_bacteria 2866552031 2866552138 436
35 iso_pu_bacteria 2916699645 2916701000 436
36 3300047321 Ga0495676_0005426 Ga0495676_0005426_10307_11659 437
37 iso_pu_bacteria 2643221561 2643826500 437
38 iso_pu_bacteria 8056207758 8056210418 437
39 3300031548 Ga0307408_100005180 Ga0307408_1000051806 438
40 3300046454 Ga0495592_0012400 Ga0495592_0012400_3271_4593 438
41 3300046458 Ga0495591_000713 Ga0495591_000713_16774_18096 438
42 3300046459 Ga0495629_0041334 Ga0495629_0041334_1881_3203 438
43 3300046462 Ga0495651_0019062 Ga0495651_0019062_202_1524 438
44 3300046463 Ga0495653_0045125 Ga0495653_0045125_1272_2594 438
45 3300046463 Ga0495653_0053326 Ga0495653_0053326_20_1342 438
46 3300046476 Ga0495662_0027511 Ga0495662_0027511_1327_2649 438
47 3300046477 Ga0495664_0006932 Ga0495664_0006932_2886_4208 438
48 3300046511 Ga0495608_0001033 Ga0495608_0001033_11494_12816 438
49 3300046514 Ga0495618_0004886 Ga0495618_0004886_3371_4693 438
50 3300046524 Ga0495648_0068406 Ga0495648_0068406_699_2021 438
51 3300046526 Ga0495666_0006827 Ga0495666_0006827_4323_5645 438
52 3300046531 Ga0495665_0049604 Ga0495665_0049604_884_2206 438
53 3300046533 Ga0495640_0009814 Ga0495640_0009814_3201_4523 438
54 3300046536 Ga0495587_0005171 Ga0495587_0005171_4498_5820 438
55 3300046557 Ga0495622_0000079 Ga0495622_0000079_18370_19692 438
56 3300046559 Ga0495667_0008167 Ga0495667_0008167_4097_5419 438
57 3300046642 Ga0495634_0006799 Ga0495634_0006799_4112_5434 438
58 3300046663 Ga0495635_0007001 Ga0495635_0007001_6227_7549 438
59 3300046665 Ga0495661_0005652 Ga0495661_0005652_2440_3762 438
60 3300046679 Ga0495623_0066277 Ga0495623_0066277_327_1649 438
61 3300046680 Ga0495646_0008646 Ga0495646_0008646_5128_6450 438
62 3300046689 Ga0495613_0011451 Ga0495613_0011451_1023_2345 438
63 3300046809 Ga0495600_0007191 Ga0495600_0007191_1514_2836 438
64 3300047321 Ga0495676_0065842 Ga0495676_0065842_351_1673 438
65 3300047323 Ga0495683_0022141 Ga0495683_0022141_1770_3092 438
66 3300047444 Ga0495675_0005621 Ga0495675_0005621_1835_3157 438
67 3300047469 Ga0495673_0004366 Ga0495673_0004366_4266_5588 438
68 3300047673 Ga0495593_0009844 Ga0495593_0009844_136_1458 438
69 3300048089 Ga0495614_0006971 Ga0495614_0006971_745_2067 438
70 3300048905 Ga0496102_0015989 Ga0496102_0015989_5217_6539 438
71 3300048920 Ga0496117_0003148 Ga0496117_0003148_13286_14608 438
72 3300048921 Ga0496118_0000198 Ga0496118_0000198_88383_89705 438
73 iso_pu_bacteria 2811994917 2812478242 438
74 iso_pu_bacteria 2862574272 2862582691 438
75 iso_pu_bacteria 2866552031 2866552107 438
76 iso_pu_bacteria 8025413630 8025413873 438
77 3300032004 Ga0307414_10175550 Ga0307414_101755501 439
78 3300047443 Ga0495687_006629 Ga0495687_006629_5162_6484 439
79 iso_pu_bacteria 2816332139 2816506793 439
80 3300046455 Ga0495603_0006667 Ga0495603_0006667_4794_6134 440
81 3300046457 Ga0495590_0030137 Ga0495590_0030137_351_1691 440
82 3300046459 Ga0495629_0079168 Ga0495629_0079168_870_2210 440
83 3300046492 Ga0495585_0037327 Ga0495585_0037327_1331_2671 440
84 3300046499 Ga0495594_0056673 Ga0495594_0056673_530_1870 440
85 3300046648 Ga0495611_0003125 Ga0495611_0003125_2914_4254 440
86 3300046794 Ga0495589_0024159 Ga0495589_0024159_1240_2580 440
87 3300047318 Ga0495636_0020956 Ga0495636_0020956_38_1378 440
88 3300048089 Ga0495614_0020934 Ga0495614_0020934_530_1870 440
89 iso_pu_bacteria 2643221696 2644535534 440
90 iso_pu_bacteria 2870782633 2870789967 440
91 iso_pu_bacteria 2990088156 2990089294 440
92 iso_pu_bacteria 8004021418 8004024179 440
93 iso_pu_bacteria 2643221548 2643761871 441
94 iso_pu_bacteria 2643221561 2643824629 441
95 iso_pu_bacteria 2643221682 2644460702 441
96 iso_pu_bacteria 2643221696 2644535881 441
97 iso_pu_bacteria 2818991463 2819699860 441
98 iso_pu_bacteria 2966598605 2966600073 441
99 3300038443 Ga0395901_0025432 Ga0395901_0025432_1914_3248 442
100 iso_pu_bacteria 2862574272 2862576321 443
101 3300025228 Ga0209672_100014 Ga0209672_10001431 445
102 3300025229 Ga0209147_100257 Ga0209147_10025733 445
103 3300025242 Ga0209258_100183 Ga0209258_10018333 445
104 3300025254 Ga0209148_1000035 Ga0209148_1000035474 445
105 3300025272 Ga0209455_1000232 Ga0209455_100023233 445
106 3300032002 Ga0307416_100059943 Ga0307416_1000599432 445
107 3300044842 Ga0466957_0062334 Ga0466957_0062334_895_2253 445
108 3300045836 Ga0466958_0112515 Ga0466958_0112515_21_1379 445
109 3300046459 Ga0495629_0004568 Ga0495629_0004568_2228_3571 445
110 3300046492 Ga0495585_0076577 Ga0495585_0076577_452_1795 445
111 3300046499 Ga0495594_0038337 Ga0495594_0038337_1061_2404 445
112 3300046674 Ga0495588_0038763 Ga0495588_0038763_957_2300 445
113 3300047321 Ga0495676_0003537 Ga0495676_0003537_504_1847 445
114 3300047323 Ga0495683_0064817 Ga0495683_0064817_129_1472 445
115 3300050496 nmdc:mga07m45_42830_c1 nmdc:mga07m45_42830_c1_137_1504 445
116 iso_pu_bacteria 2513237082 2513554764 446
117 iso_pu_bacteria 2513237083 2513562063 446
118 iso_pu_bacteria 8003955200 8003959630 446
119 3300025929 Ga0207664_10134081 Ga0207664_101340812 447
120 3300046455 Ga0495603_0000293 Ga0495603_0000293_21526_22890 447
121 3300046459 Ga0495629_0001352 Ga0495629_0001352_7743_9107 447
122 3300046689 Ga0495613_0000824 Ga0495613_0000824_550_1914 447
123 3300047321 Ga0495676_0006052 Ga0495676_0006052_9208_10572 447
124 3300048089 Ga0495614_0012851 Ga0495614_0012851_1759_3123 447
125 iso_pu_bacteria 2811994881 2812370978 447
126 iso_pu_bacteria 2923519811 2923525085 447
127 3300025229 Ga0209147_100194 Ga0209147_10019454 448
128 iso_pu_bacteria 2565956761 2566996710 448
129 iso_pu_bacteria 2904535858 2904536505 448
130 iso_pu_bacteria 2922554459 2922558441 448
131 iso_pu_bacteria 3006425503 3006430871 448
132 3300046616 Ga0495668_0000945 Ga0495668_0000945_26501_27871 449
133 3300048928 Ga0496125_0084671 Ga0496125_0084671_103_1473 449
134 3300046460 Ga0495638_0033133 Ga0495638_0033133_1043_2449 453
135 3300047470 Ga0495681_0032522 Ga0495681_0032522_1128_2534 453
136 iso_pu_bacteria 2511231006 2511267702 453
137 iso_pu_bacteria 2554235341 2555667326 453
138 iso_pu_bacteria 2565956761 2566991995 453
139 iso_pu_bacteria 2597489887 2597855566 453
140 iso_pu_bacteria 2599185160 2599356549 453
141 iso_pu_bacteria 2599185161 2599363421 453
142 iso_pu_bacteria 2599185162 2599369627 453
143 iso_pu_bacteria 2599185163 2599376530 453
144 iso_pu_bacteria 2599185164 2599381654 453
145 iso_pu_bacteria 2599185165 2599388202 453
146 iso_pu_bacteria 2599185166 2599395274 453
147 iso_pu_bacteria 2599185168 2599407039 453
148 iso_pu_bacteria 2599185181 2599463382 453
149 iso_pu_bacteria 2599185182 2599469268 453
150 iso_pu_bacteria 2599185185 2599485468 453
151 iso_pu_bacteria 2599185186 2599492399 453
152 iso_pu_bacteria 2599185239 2599736811 453
153 iso_pu_bacteria 2599185240 2599744883 453
154 iso_pu_bacteria 2599185355 2600205753 453
155 iso_pu_bacteria 2599185356 2600216011 453
156 iso_pu_bacteria 2600255313 2601776178 453
157 iso_pu_bacteria 2667528171 2671100061 453
158 iso_pu_bacteria 2675903129 2676743012 453
159 iso_pu_bacteria 2740892503 2743734983 453
160 iso_pu_bacteria 2818991452 2819631336 453
161 iso_pu_bacteria 2818991464 2819705123 453
162 iso_pu_bacteria 2844665904 2844667804 453
163 iso_pu_bacteria 2863421361 2863427348 453
164 iso_pu_bacteria 2870068957 2870070817 453
165 iso_pu_bacteria 2904535858 2904538606 453
166 iso_pu_bacteria 2904564687 2904569968 453
167 iso_pu_bacteria 2904571731 2904576121 453
168 iso_pu_bacteria 2917070673 2917071077 453
169 iso_pu_bacteria 2922554459 2922559336 453
170 iso_pu_bacteria 2923153595 2923153978 453
171 iso_pu_bacteria 2928170801 2928171531 453
172 iso_pu_bacteria 2928536128 2928542532 453
173 iso_pu_bacteria 2935353572 2935358905 453
174 iso_pu_bacteria 637000220 637317723 453
175 iso_pu_bacteria 8015687852 8015688227 453
176 iso_pu_bacteria 8018845410 8018846921 453
177 iso_pu_bacteria 8020938398 8020944879 453
178 iso_pu_bacteria 8020945358 8020945443 453
179 iso_pu_bacteria 8020953355 8020957084 453
180 iso_pu_bacteria 8021120328 8021122060 453
181 iso_pu_bacteria 8039098773 8039100065 453
182 3300049460 Ga0495682_0000222 Ga0495682_0000222_11119_12528 454
183 iso_pu_bacteria 2554235132 2554813714 454
184 iso_pu_bacteria 2606217733 2608381123 454
185 iso_pu_bacteria 3007395558 3007397993 454
186 3300002737 JGI25162J39368_1000129 JGI25162J39368_100012951 457
187 3300002738 JGI25154J39366_1005627 JGI25154J39366_10056272 457
188 3300002771 JGI25163J39215_1000688 JGI25163J39215_10006883 457
189 3300002772 JGI25164J39214_1000101 JGI25164J39214_100010126 457
190 3300003214 JGI25165J46597_1000150 JGI25165J46597_100015077 457
191 3300003760 Ga0055527_1001570 Ga0055527_10015702 457
192 3300003762 Ga0055542_1000588 Ga0055542_10005889 457
193 3300003762 Ga0055542_1008206 Ga0055542_10082062 457
194 3300003781 Ga0055536_1000232 Ga0055536_100023224 457
195 3300003790 Ga0055528_1004524 Ga0055528_10045243 457
196 3300003791 Ga0055530_10000390 Ga0055530_1000039014 457
197 3300003841 Ga0055541_1000254 Ga0055541_10002546 457
198 3300005435 Ga0070714_100097473 Ga0070714_1000974732 457
199 3300006353 Ga0075370_10012512 Ga0075370_100125124 457
200 3300009093 Ga0105240_10028949 Ga0105240_100289493 457
201 3300009148 Ga0105243_10001328 Ga0105243_100013289 457
202 3300013102 Ga0157371_10006974 Ga0157371_100069747 457
203 3300014497 Ga0182008_10003343 Ga0182008_100033437 457
204 3300025207 Ga0209760_100244 Ga0209760_1002449 457
205 3300025225 Ga0209566_100229 Ga0209566_10022928 457
206 3300025225 Ga0209566_101350 Ga0209566_1013509 457
207 3300025226 Ga0209674_100346 Ga0209674_10034613 457
208 3300025228 Ga0209672_100023 Ga0209672_10002347 457
209 3300025229 Ga0209147_100177 Ga0209147_10017722 457
210 3300025230 Ga0209563_102767 Ga0209563_1027674 457
211 3300025231 Ga0207427_100014 Ga0207427_100014279 457
212 3300025233 Ga0209437_100016 Ga0209437_100016358 457
213 3300025242 Ga0209258_100134 Ga0209258_100134106 457
214 3300025246 Ga0209646_1000019 Ga0209646_100001935 457
215 3300025250 Ga0209026_1010544 Ga0209026_10105442 457
216 3300025254 Ga0209148_1000193 Ga0209148_100019350 457
217 3300025254 Ga0209148_1001762 Ga0209148_10017628 457
218 3300025261 Ga0209233_1000036 Ga0209233_1000036279 457
219 3300025273 Ga0209673_1000140 Ga0209673_1000140142 457
220 3300025292 Ga0209676_1000032 Ga0209676_1000032257 457
221 3300025295 Ga0209564_1006713 Ga0209564_10067133 457
222 3300025298 Ga0209050_1000025 Ga0209050_1000025258 457
223 3300025303 Ga0209051_1000039 Ga0209051_100003919 457
224 3300025303 Ga0209051_1000047 Ga0209051_100004719 457
225 3300025913 Ga0207695_10008215 Ga0207695_100082153 457
226 3300025935 Ga0207709_10001633 Ga0207709_100016339 457
227 3300027312 Ga0209371_1001185 Ga0209371_100118510 457
228 3300030500 Ga0268256_1001051 Ga0268256_10010516 457
229 3300039447 Ga0436361_0105554 Ga0436361_0105554_437_1819 457
230 3300046616 Ga0495668_0000128 Ga0495668_0000128_83907_85322 457
231 3300048919 Ga0496116_0004855 Ga0496116_0004855_2506_3918 457
232 3300048920 Ga0496117_0009009 Ga0496117_0009009_2472_3884 457
233 3300048924 Ga0496121_0007915 Ga0496121_0007915_2504_3916 457
234 3300048925 Ga0496122_0010180 Ga0496122_0010180_5861_7273 457
235 3300048928 Ga0496125_0065047 Ga0496125_0065047_916_2331 457
236 3300050496 nmdc:mga07m45_31336_c1 nmdc:mga07m45_31336_c1_745_2160 457
237 iso_pu_bacteria 2928157003 2928162841 457
238 3300005327 Ga0070658_10035813 Ga0070658_100358133 458
239 3300025904 Ga0207647_10015859 Ga0207647_100158593 458
240 3300025949 Ga0207667_10183334 Ga0207667_101833342 458
241 3300049460 Ga0495682_0000276 Ga0495682_0000276_19327_20742 458
242 3300049574 Ga0501038_0070325 Ga0501038_0070325_1205_2614 458
243 iso_pu_bacteria 2928163908 2928169513 458
244 iso_pu_bacteria 641736154 642420315 458
245 iso_pu_bacteria 2981990288 2981996966 459
246 3300042016 Ga0439463_000270 Ga0439463_000270_11592_13019 460
247 3300046474 Ga0495605_0002796 Ga0495605_0002796_3135_4571 460
248 3300046491 Ga0495584_0003000 Ga0495584_0003000_3171_4607 460
249 3300046492 Ga0495585_0010919 Ga0495585_0010919_2482_3918 460
250 3300046500 Ga0495596_0000394 Ga0495596_0000394_1090_2526 460
251 3300046507 Ga0495606_0010161 Ga0495606_0010161_603_2039 460
252 3300046512 Ga0495610_0005801 Ga0495610_0005801_6287_7723 460
253 3300046513 Ga0495616_0001552 Ga0495616_0001552_811_2247 460
254 3300046519 Ga0495632_0003372 Ga0495632_0003372_9773_11209 460
255 3300046522 Ga0495643_0039112 Ga0495643_0039112_1027_2463 460
256 3300046524 Ga0495648_0069866 Ga0495648_0069866_592_2028 460
257 3300046530 Ga0495654_0000832 Ga0495654_0000832_246_1682 460
258 3300046557 Ga0495622_0000929 Ga0495622_0000929_808_2244 460
259 3300046692 Ga0495671_0007199 Ga0495671_0007199_4578_6014 460
260 3300046810 Ga0495660_0004609 Ga0495660_0004609_327_1763 460
261 3300047320 Ga0495672_0005105 Ga0495672_0005105_8505_9941 460
262 3300047321 Ga0495676_0000004 Ga0495676_0000004_87794_89230 460
263 3300047446 Ga0495679_000015 Ga0495679_000015_228055_229491 460
264 3300047469 Ga0495673_0010694 Ga0495673_0010694_3247_4683 460
265 3300047472 Ga0495686_0020047 Ga0495686_0020047_2339_3775 460
266 3300048091 Ga0495626_0000012 Ga0495626_0000012_132501_133937 460
267 3300049459 Ga0495678_000949 Ga0495678_000949_176_1612 460
268 iso_pu_bacteria 2599185307 2599970230 460
269 3300005339 Ga0070660_100000926 Ga0070660_10000092611 461
270 3300005366 Ga0070659_100000050 Ga0070659_10000005011 461
271 3300005614 Ga0068856_100277080 Ga0068856_1002770802 461
272 3300005616 Ga0068852_100011302 Ga0068852_1000113021 461
273 3300025913 Ga0207695_10020073 Ga0207695_100200735 461
274 3300025914 Ga0207671_10024446 Ga0207671_100244464 461
275 3300025919 Ga0207657_10001883 Ga0207657_1000188310 461
276 3300025932 Ga0207690_10000047 Ga0207690_1000004726 461
277 3300026142 Ga0207698_10026690 Ga0207698_100266901 461
278 3300009092 Ga0105250_10012021 Ga0105250_100120211 463
279 3300009093 Ga0105240_10062821 Ga0105240_100628213 463
280 3300009545 Ga0105237_10091431 Ga0105237_100914312 463
281 3300009551 Ga0105238_10023122 Ga0105238_100231222 463
282 3300047322 Ga0495680_0032716 Ga0495680_0032716_2580_4028 463
283 iso_pu_bacteria 2596583598 2597032430 464
284 iso_pu_bacteria 2599185178 2599444322 464
285 iso_pu_bacteria 2885266251 2885268531 464
286 iso_pu_bacteria 2900577576 2900580927 464
287 iso_pu_bacteria 2928058823 2928063195 464
288 3300050496 nmdc:mga07m45_57250_c1 nmdc:mga07m45_57250_c1_399_1808 465
289 3300001915 JGI24741J21665_1000083 JGI24741J21665_100008314 468
290 3300001979 JGI24740J21852_10000951 JGI24740J21852_100009512 468
291 3300003752 Ga0055539_1000062 Ga0055539_100006293 468
292 3300003758 Ga0055532_1000019 Ga0055532_1000019164 468
293 3300003759 Ga0055525_1000275 Ga0055525_10002755 468
294 3300003761 Ga0055535_1000014 Ga0055535_1000014116 468
295 3300003763 Ga0055529_1000086 Ga0055529_100008695 468
296 3300003841 Ga0055541_1004733 Ga0055541_10047332 468
297 3300005344 Ga0070661_100000054 Ga0070661_10000005415 468
298 3300005366 Ga0070659_100004271 Ga0070659_1000042714 468
299 3300005455 Ga0070663_100000010 Ga0070663_10000001098 468
300 3300005564 Ga0070664_100000005 Ga0070664_100000005100 468
301 3300005577 Ga0068857_100005116 Ga0068857_1000051169 468
302 3300005578 Ga0068854_100000032 Ga0068854_10000003226 468
303 3300005614 Ga0068856_100000054 Ga0068856_10000005499 468
304 3300013100 Ga0157373_10006041 Ga0157373_100060411 468
305 3300013102 Ga0157371_10000103 Ga0157371_1000010315 468
306 3300013104 Ga0157370_10001099 Ga0157370_1000109915 468
307 3300013105 Ga0157369_10075187 Ga0157369_100751872 468
308 3300013307 Ga0157372_10000151 Ga0157372_1000015154 468
309 3300015261 Ga0182006_1004418 Ga0182006_10044186 468
310 3300015261 Ga0182006_1011511 Ga0182006_10115112 468
311 3300020610 Ga0154015_1417986 Ga0154015_14179862 468
312 3300025224 Ga0209784_100003 Ga0209784_1000031161 468
313 3300025225 Ga0209566_100002 Ga0209566_1000022115 468
314 3300025226 Ga0209674_100008 Ga0209674_10000870 468
315 3300025228 Ga0209672_100788 Ga0209672_1007884 468
316 3300025229 Ga0209147_100002 Ga0209147_1000021253 468
317 3300025230 Ga0209563_100004 Ga0209563_1000041532 468
318 3300025242 Ga0209258_100002 Ga0209258_1000021253 468
319 3300025253 Ga0209677_100009 Ga0209677_100009100 468
320 3300025256 Ga0209759_1001051 Ga0209759_100105112 468
321 3300025272 Ga0209455_1000076 Ga0209455_1000076163 468
322 3300025913 Ga0207695_10005643 Ga0207695_100056436 468
323 3300025920 Ga0207649_10000087 Ga0207649_100000878 468
324 3300025932 Ga0207690_10005360 Ga0207690_100053604 468
325 3300025945 Ga0207679_10000020 Ga0207679_1000002097 468
326 3300025981 Ga0207640_10000017 Ga0207640_1000001726 468
327 3300026067 Ga0207678_10000008 Ga0207678_1000000897 468
328 3300026078 Ga0207702_10000017 Ga0207702_1000001797 468
329 3300026116 Ga0207674_10001770 Ga0207674_100017708 468
330 3300037418 Ga0395900_0041367 Ga0395900_0041367_3249_4655 468
331 3300037471 Ga0395905_0152880 Ga0395905_0152880_12_1418 468
332 3300048920 Ga0496117_0044464 Ga0496117_0044464_1516_2931 468
333 3300048921 Ga0496118_0095790 Ga0496118_0095790_256_1671 468
334 3300048928 Ga0496125_0002121 Ga0496125_0002121_13688_15094 468

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

11

222

0.94

PF07690

MFS_1

Major Facilitator Superfamily

248

453

0.85

PF07690

MFS_1

Major Facilitator Superfamily

16

256

0.69

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.8041 20 426
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.8021 15 432
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.8008 59 425
8hpk-assembly1.cif.gz_A crystal structure of the bacterial oxalate transporter oxlt in an oxalate-bound occluded form 0.7966 15 432
7ckr-assembly1.cif.gz_A cryo-em structure of the human mct1/basigin-2 complex in the presence of anti-cancer drug candidate bay-8002 in the outward-open conformation. 0.7854 20 426
ID Description Score Start End Superfamily
af_P37643_22_237_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9601 20 233 1.20.1250.20
af_Q2G0K4_17_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9529 19 228 1.20.1250.20
af_P37643_22_237_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9472 20 233 1.20.1250.20
af_Q2G0K4_17_228_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9399 19 228 1.20.1250.20
af_P37643_245_439_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9258 242 423 1.20.1250.20
ID Description Score Start End GO Terms
AF-K0USN9-F1-model_v4 Major facilitator transporter 0.973 17 424 GO:0005886
GO:0022857
AF-A0A4S2R1F5-F1-model_v4 MFS transporter 0.9715 19 422 GO:0005886
GO:0022857
AF-A0A1H5W2P8-F1-model_v4 Major Facilitator Superfamily protein 0.9703 17 423 GO:0005886
GO:0022857
AF-A0A353ZXW9-F1-model_v4 MFS transporter 0.9703 16 230 GO:0005886
GO:0022857
AF-A0A1S7BE27-F1-model_v4 deleted 0.9692 15 424

Feature Viewer

pLDDT pTM Quality
86.59 0.85 High
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Predicted Structure (AlphaFold2)

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Map