F411482

General Info

Members Datasets Scaffolds Average Seq Length
333 183 666 398

Family's Representative Sequence

Representative Sequence 3300046454|Ga0495592_0034548|Ga0495592_0034548_1417_2796
Length 459
Sequence MNIDRHDSVCAHPAGPSTAIRSWVGFDQEPAARNRIVARRPGAAPTTPEEVRWMPEAVIVATARSPIGRAFKGSLTSIRPDDLVAQMIRAALAKIPQLDPAHIEDLMLGCGLPGGEQGFNMARVVAVLLGMDHLPGATLTRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFVKGSSDSLPDTQNPVFADAVARTETRGQGGAETWRDPREDGRIPDIYIAMGQTAENVAQLRGITREMQDAFGVRSQNLAETAIGNGFWERDITSVTLPDGAVITRDDGPRAGTTIEKVAQLEPVFRPDGTVTAGNCCPLNDGAAAVVVMSDAKAAELGITPLARIVSTGITALSPEIMGLGPVEASKQALGRAGMTIDDVDLVEINEAFAAQVIPSAQDLGVGEDRLNVNGGAIAVGHPFGMTGARITSTLLNSLAFHDKQIGLETMCVGGGQGMAMIVERIS

Samples

Sample ID Description Type Environment
1 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
2 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
29 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
45 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
46 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
47 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
66 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
67 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
68 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
69 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
70 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
71 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
72 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
73 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
74 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
75 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
76 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
77 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
78 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
79 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
80 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
81 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
82 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
85 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
86 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
88 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
89 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
90 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
91 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
94 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
95 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
96 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
97 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
98 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
99 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
100 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
101 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
102 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
103 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
104 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
105 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
106 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
107 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
108 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
109 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
110 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
111 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
112 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
113 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
114 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
115 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
116 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
117 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
120 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
121 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
122 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
123 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
124 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
125 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
126 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
127 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
128 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
129 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
130 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
131 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
132 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
133 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
134 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
135 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
136 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
137 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
141 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
142 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
147 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
148 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
149 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
150 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
151 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
152 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
158 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
159 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
163 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
164 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
167 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
168 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
169 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
170 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
171 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
172 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
173 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
174 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
175 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
176 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
177 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
178 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
179 2939582691 Mycolicibacterium sp. 624 Isolate Rhizosphere
180 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
181 8053945823 Actinomadura terrae OS3-83 Isolate Rhizosphere
182 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
183 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 95.5
Metatranscriptomes 0.3
Isolates 4.2

Biome Distribution

Category Percentage (%)
Aerial Root 0.3
Bulb 0
Endosphere 1.8
Nodule 0
Rhizoplane 3.6
Rhizosphere 89.79
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495592_0034548 3300046454 Bacteria 3811
2 JGI25404J52841_10000310 3300003659 Bacteria 6411
3 Ga0070683_100128985 3300005329 Bacteria 2392
4 Ga0070683_100389956 3300005329 Bacteria 1328
5 Ga0070691_10068647 3300005341 Bacteria 1716
6 Ga0070668_100117274 3300005347 Bacteria 2124
7 Ga0070671_100074612 3300005355 Bacteria 2834
8 Ga0070659_100023245 3300005366 Bacteria 4741
9 Ga0070709_10004349 3300005434 Bacteria 7636
10 Ga0070714_100001257 3300005435 Bacteria 18300
11 Ga0070714_100098705 3300005435 Bacteria 2569
12 Ga0070714_100161205 3300005435 Bacteria 2029
13 Ga0070713_100010553 3300005436 Bacteria 6678
14 Ga0070713_100087128 3300005436 Bacteria 2678
15 Ga0070713_100239584 3300005436 Bacteria 1652
16 Ga0070710_10005957 3300005437 Bacteria 5823
17 Ga0070710_10019732 3300005437 Bacteria 3489
18 Ga0070710_10089653 3300005437 Bacteria 1812
19 Ga0070711_100001371 3300005439 Bacteria 13309
20 Ga0070711_100047598 3300005439 Bacteria 2928
21 Ga0070708_100001881 3300005445 Bacteria 16105
22 Ga0070708_100001952 3300005445 Bacteria 15926
23 Ga0070708_100049684 3300005445 Bacteria 3711
24 Ga0070708_100117808 3300005445 Bacteria 2446
25 Ga0070681_10061046 3300005458 Bacteria 3746
26 Ga0070706_100007753 3300005467 Bacteria 10039
27 Ga0070706_100021882 3300005467 Bacteria 5888
28 Ga0070706_100024209 3300005467 Bacteria 5588
29 Ga0070707_100030752 3300005468 Bacteria 5114
30 Ga0070698_100003490 3300005471 Bacteria 17302
31 Ga0070698_100004511 3300005471 Bacteria 15306
32 Ga0070698_100071489 3300005471 Bacteria 3479
33 Ga0070698_100087403 3300005471 Bacteria 3103
34 Ga0070698_100123365 3300005471 Bacteria 2549
35 Ga0070698_100208560 3300005471 Bacteria 1889
36 Ga0070698_100235420 3300005471 Bacteria 1764
37 Ga0070698_100410236 3300005471 Bacteria 1288
38 Ga0070699_100000896 3300005518 Bacteria 27814
39 Ga0070699_100182340 3300005518 Bacteria 1863
40 Ga0070697_100001714 3300005536 Bacteria 16736
41 Ga0070697_100005573 3300005536 Bacteria 9706
42 Ga0070697_100212206 3300005536 Bacteria 1648
43 Ga0070696_100068795 3300005546 Bacteria 2486
44 Ga0070696_100134945 3300005546 Bacteria 1799
45 Ga0068856_100031968 3300005614 Bacteria 5150
46 Ga0068856_100131919 3300005614 Bacteria 2503
47 Ga0068864_100153942 3300005618 Bacteria 2085
48 Ga0068861_100028628 3300005719 Bacteria 4066
49 Ga0068863_100383533 3300005841 Bacteria 1372
50 Ga0081538_10000400 3300005981 Bacteria 49025
51 Ga0081540_1000352 3300005983 Bacteria 46545
52 Ga0081540_1001842 3300005983 Bacteria 17783
53 Ga0070717_10002549 3300006028 Bacteria 12843
54 Ga0070717_10067729 3300006028 Bacteria 2970
55 Ga0070717_10113070 3300006028 Bacteria 2318
56 Ga0070717_10158464 3300006028 Bacteria 1962
57 Ga0075363_100037087 3300006048 Bacteria 2559
58 Ga0075364_10000310 3300006051 Bacteria 23850
59 Ga0075364_10035274 3300006051 Bacteria 3232
60 Ga0075364_10100149 3300006051 Bacteria 1929
61 Ga0070715_10006978 3300006163 Bacteria 3865
62 Ga0070712_100036558 3300006175 Bacteria 3343
63 Ga0070712_100087886 3300006175 Bacteria 2269
64 Ga0068871_100073309 3300006358 Bacteria 2822
65 Ga0075428_100039627 3300006844 Bacteria 5185
66 Ga0075428_100073081 3300006844 Bacteria 3745
67 Ga0075430_100024061 3300006846 Bacteria 5186
68 Ga0075431_100127535 3300006847 Bacteria 2625
69 Ga0075433_10012528 3300006852 Bacteria 6855
70 Ga0075433_10204194 3300006852 Bacteria 1757
71 Ga0075434_100219817 3300006871 Bacteria 1919
72 Ga0075436_100005952 3300006914 Bacteria 8377
73 Ga0075436_100065033 3300006914 Bacteria 2521
74 Ga0075436_100188302 3300006914 Bacteria 1460
75 Ga0075435_100069855 3300007076 Bacteria 2865
76 Ga0114129_10141718 3300009147 Bacteria 3294
77 Ga0114129_10216493 3300009147 Bacteria 2586
78 Ga0105243_10003435 3300009148 Bacteria 12820
79 Ga0105237_10006839 3300009545 Bacteria 12569
80 Ga0105239_10046831 3300010375 Bacteria 4738
81 Ga0105239_10420596 3300010375 Bacteria 1514
82 Ga0206353_10449119 3300020082 Bacteria 3112
83 Ga0213875_10000237 3300021388 Bacteria 55333
84 Ga0213875_10011658 3300021388 Bacteria 4366
85 Ga0224572_1001973 3300024225 Bacteria 3204
86 Ga0207692_10001496 3300025898 Bacteria 8773
87 Ga0207692_10106347 3300025898 Bacteria 1549
88 Ga0207688_10011350 3300025901 Bacteria 4851
89 Ga0207699_10003334 3300025906 Bacteria 7660
90 Ga0207699_10012766 3300025906 Bacteria 4278
91 Ga0207699_10023686 3300025906 Bacteria 3344
92 Ga0207684_10001543 3300025910 Bacteria 24639
93 Ga0207684_10083790 3300025910 Bacteria 2715
94 Ga0207671_10078914 3300025914 Bacteria 2466
95 Ga0207693_10010371 3300025915 Bacteria 7563
96 Ga0207693_10016741 3300025915 Bacteria 5856
97 Ga0207693_10029710 3300025915 Bacteria 4314
98 Ga0207693_10094163 3300025915 Bacteria 2348
99 Ga0207663_10005215 3300025916 Bacteria 6539
100 Ga0207663_10013562 3300025916 Bacteria 4433
101 Ga0207663_10107574 3300025916 Bacteria 1886
102 Ga0207663_10218078 3300025916 Bacteria 1387
103 Ga0207662_10003119 3300025918 Bacteria 8462
104 Ga0207657_10024192 3300025919 Bacteria 5635
105 Ga0207646_10003893 3300025922 Bacteria 16567
106 Ga0207646_10031784 3300025922 Bacteria 4778
107 Ga0207646_10060103 3300025922 Bacteria 3394
108 Ga0207700_10005035 3300025928 Bacteria 7860
109 Ga0207700_10064599 3300025928 Bacteria 2788
110 Ga0207700_10286900 3300025928 Bacteria 1417
111 Ga0207664_10000575 3300025929 Bacteria 25779
112 Ga0207664_10001348 3300025929 Bacteria 16136
113 Ga0207664_10033223 3300025929 Bacteria 3962
114 Ga0207664_10047725 3300025929 Bacteria 3365
115 Ga0207664_10063017 3300025929 Bacteria 2962
116 Ga0207664_10076985 3300025929 Bacteria 2702
117 Ga0207665_10009861 3300025939 Bacteria 6268
118 Ga0207665_10020810 3300025939 Bacteria 4312
119 Ga0207689_10003733 3300025942 Bacteria 13876
120 Ga0207702_10023375 3300026078 Bacteria 5126
121 Ga0207676_10206874 3300026095 Bacteria 1738
122 Ga0207675_100176445 3300026118 Bacteria 2044
123 Ga0207683_10004206 3300026121 Bacteria 12443
124 Ga0265319_1041883 3300028563 Bacteria 1542
125 Ga0265318_10006144 3300028577 Bacteria 5561
126 Ga0265336_10003002 3300028666 Bacteria 6724
127 Ga0265336_10032553 3300028666 Bacteria 1617
128 Ga0265338_10000577 3300028800 Bacteria 64591
129 Ga0265320_10039454 3300031240 Bacteria 2361
130 Ga0265327_10009075 3300031251 Bacteria 7260
131 Ga0373929_0010639 3300035085 Bacteria 1723
132 Ga0373929_0010798 3300035085 Bacteria 1713
133 Ga0373934_0000054 3300035086 Bacteria 38975
134 Ga0373934_0006620 3300035086 Bacteria 4300
135 Ga0373934_0011336 3300035086 Bacteria 3356
136 Ga0373944_0000487 3300035089 Bacteria 9214
137 Ga0373951_0021675 3300035091 Bacteria 1476
138 Ga0373923_0043639 3300035111 Bacteria 1856
139 Ga0373932_0016055 3300035112 Bacteria 1907
140 Ga0373936_0009329 3300035113 Bacteria 3697
141 Ga0373936_0013732 3300035113 Bacteria 3090
142 Ga0373953_0000101 3300035117 Bacteria 20545
143 Ga0373953_0001902 3300035117 Bacteria 6190
144 Ga0373954_0003856 3300035118 Bacteria 6415
145 Ga0373954_0007433 3300035118 Bacteria 4795
146 Ga0373956_0000197 3300035119 Bacteria 23300
147 Ga0373956_0003430 3300035119 Bacteria 6380
148 Ga0373956_0025859 3300035119 Bacteria 2539
149 Ga0373956_0076099 3300035119 Bacteria 1535
150 Ga0373957_0000329 3300035120 Bacteria 11934
151 Ga0373957_0014556 3300035120 Bacteria 2691
152 Ga0373943_0000595 3300035170 Bacteria 15704
153 Ga0373943_0067790 3300035170 Bacteria 1800
154 Ga0373946_0000361 3300035171 Bacteria 14688
155 Ga0373946_0001103 3300035171 Bacteria 9322
156 Ga0373955_0000009 3300035172 Bacteria 81129
157 Ga0373955_0020911 3300035172 Bacteria 3295
158 Ga0373955_0056172 3300035172 Bacteria 2159
159 Ga0373961_0016734 3300035241 Bacteria 1892
160 Ga0373924_0007586 3300035410 Bacteria 3919
161 Ga0373931_0021906 3300035691 Bacteria 3210
162 Ga0373935_0001028 3300035692 Bacteria 15181
163 Ga0373935_0059042 3300035692 Bacteria 2451
164 Ga0373935_0078675 3300035692 Bacteria 2139
165 Ga0373935_0089181 3300035692 Bacteria 2016
166 Ga0373935_0104309 3300035692 Bacteria 1873
167 Ga0373927_0002131 3300035695 Bacteria 14572
168 Ga0373933_0000006 3300035724 Bacteria 125141
169 Ga0373933_0037471 3300035724 Bacteria 2844
170 Ga0373933_0044014 3300035724 Bacteria 2643
171 Ga0373937_0000137 3300036401 Bacteria 70670
172 Ga0373937_0002235 3300036401 Bacteria 16170
173 Ga0373937_0057122 3300036401 Bacteria 3584
174 Ga0373937_0151424 3300036401 Bacteria 2173
175 Ga0373925_0009765 3300037068 Bacteria 6968
176 Ga0373925_0028562 3300037068 Bacteria 4086
177 Ga0373925_0048668 3300037068 Bacteria 3159
178 Ga0395898_0028382 3300037466 Bacteria 5608
179 Ga0395905_0231004 3300037471 Bacteria 1730
180 Ga0436364_0115578 3300037853 Bacteria 5083
181 Ga0436364_0212173 3300037853 Bacteria 42848
182 Ga0436364_0501524 3300037853 Bacteria 35879
183 Ga0436364_1521070 3300037853 Bacteria 4361
184 Ga0395901_0076166 3300038443 Bacteria 3500
185 Ga0439465_0033098 3300041413 Bacteria 1652
186 Ga0439442_000108 3300042002 Bacteria 20393
187 Ga0450920_000003 3300042122 Bacteria 43364
188 Ga0450907_001100 3300042146 Bacteria 6221
189 Ga0439434_0000030 3300042435 Bacteria 34777
190 Ga0466970_0027433 3300044765 Bacteria 2988
191 Ga0466970_0097586 3300044765 Bacteria 1599
192 Ga0466967_0030837 3300045976 Bacteria 4504
193 Ga0495592_0023628 3300046454 Bacteria 4675
194 Ga0495592_0063539 3300046454 Bacteria 2707
195 Ga0495629_0007556 3300046459 Bacteria 8010
196 Ga0495629_0030138 3300046459 Bacteria 3847
197 Ga0495629_0156581 3300046459 Bacteria 1583
198 Ga0495641_0000487 3300046461 Bacteria 33152
199 Ga0495651_0001950 3300046462 Bacteria 15951
200 Ga0495651_0020462 3300046462 Bacteria 5137
201 Ga0495651_0042978 3300046462 Bacteria 3506
202 Ga0495651_0045749 3300046462 Bacteria 3390
203 Ga0495653_0000440 3300046463 Bacteria 32649
204 Ga0495653_0024224 3300046463 Bacteria 4894
205 Ga0495653_0067978 3300046463 Bacteria 2673
206 Ga0495653_0070319 3300046463 Bacteria 2620
207 Ga0495653_0085340 3300046463 Bacteria 2323
208 Ga0495582_0061425 3300046473 Bacteria 2075
209 Ga0495662_0008246 3300046476 Bacteria 5133
210 Ga0495664_0000359 3300046477 Bacteria 22032
211 Ga0495664_0015684 3300046477 Bacteria 4310
212 Ga0495596_0023997 3300046500 Bacteria 2473
213 Ga0495608_0000328 3300046511 Bacteria 33529
214 Ga0495608_0028150 3300046511 Bacteria 3820
215 Ga0495618_0011825 3300046514 Bacteria 5297
216 Ga0495618_0166302 3300046514 Bacteria 1404
217 Ga0495628_0000136 3300046516 Bacteria 62431
218 Ga0495644_0005029 3300046523 Bacteria 5171
219 Ga0495652_0000273 3300046529 Bacteria 61215
220 Ga0495652_0013283 3300046529 Bacteria 7411
221 Ga0495640_0047644 3300046533 Bacteria 2965
222 Ga0495640_0047788 3300046533 Bacteria 2960
223 Ga0495586_0076016 3300046535 Bacteria 1839
224 Ga0495587_0000070 3300046536 Bacteria 85402
225 Ga0495587_0005319 3300046536 Bacteria 8416
226 Ga0495587_0018378 3300046536 Bacteria 4337
227 Ga0495645_0009656 3300046543 Bacteria 6748
228 Ga0495667_0000048 3300046559 Bacteria 117509
229 Ga0495667_0007481 3300046559 Bacteria 7406
230 Ga0495667_0040584 3300046559 Bacteria 3090
231 Ga0495667_0078707 3300046559 Bacteria 2143
232 Ga0495634_0056683 3300046642 Bacteria 2617
233 Ga0495634_0057892 3300046642 Bacteria 2585
234 Ga0495635_0000370 3300046663 Bacteria 28607
235 Ga0495635_0006125 3300046663 Bacteria 8389
236 Ga0495588_0006507 3300046674 Bacteria 5267
237 Ga0495657_0000046 3300046675 Bacteria 106064
238 Ga0495657_0014242 3300046675 Bacteria 5842
239 Ga0495657_0021270 3300046675 Bacteria 4656
240 Ga0495657_0038617 3300046675 Bacteria 3284
241 Ga0495657_0042863 3300046675 Bacteria 3087
242 Ga0495599_0000023 3300046678 Bacteria 125139
243 Ga0495599_0033646 3300046678 Bacteria 3221
244 Ga0495599_0034848 3300046678 Bacteria 3161
245 Ga0495599_0043026 3300046678 Bacteria 2834
246 Ga0495599_0100579 3300046678 Bacteria 1802
247 Ga0495623_0005043 3300046679 Bacteria 8663
248 Ga0495646_0012710 3300046680 Bacteria 5349
249 Ga0495646_0015206 3300046680 Bacteria 4888
250 Ga0495646_0078307 3300046680 Bacteria 1932
251 Ga0495647_0030091 3300046681 Bacteria 2012
252 Ga0495658_0038477 3300046683 Bacteria 2649
253 Ga0495624_0028758 3300046690 Bacteria 3629
254 Ga0495600_0059095 3300046809 Bacteria 2504
255 Ga0495600_0189749 3300046809 Bacteria 1322
256 Ga0495581_0012149 3300047315 Bacteria 4985
257 Ga0495604_0000037 3300047317 Bacteria 125140
258 Ga0495604_0097392 3300047317 Bacteria 2169
259 Ga0495674_0002352 3300047319 Bacteria 18545
260 Ga0495676_0013891 3300047321 Bacteria 7220
261 Ga0495680_0000260 3300047322 Bacteria 58455
262 Ga0495680_0006085 3300047322 Bacteria 11269
263 Ga0495680_0006883 3300047322 Bacteria 10495
264 Ga0495680_0033819 3300047322 Bacteria 4136
265 Ga0495680_0042472 3300047322 Bacteria 3607
266 Ga0495675_0000359 3300047444 Bacteria 31787
267 Ga0495675_0007782 3300047444 Bacteria 6614
268 Ga0495684_0001227 3300047471 Bacteria 20594
269 Ga0495684_0013816 3300047471 Bacteria 6212
270 Ga0495684_0023297 3300047471 Bacteria 4761
271 Ga0495684_0120161 3300047471 Bacteria 1980
272 Ga0495684_0150787 3300047471 Bacteria 1738
273 Ga0495684_0229426 3300047471 Bacteria 1358
274 Ga0495686_0000003 3300047472 Bacteria 899502
275 Ga0495686_0027503 3300047472 Bacteria 3712
276 Ga0495686_0033855 3300047472 Bacteria 3295
277 Ga0495602_0090019 3300048088 Bacteria 2550
278 Ga0495602_0129073 3300048088 Bacteria 2019
279 Ga0495602_0146722 3300048088 Bacteria 1860
280 Ga0495614_0057986 3300048089 Bacteria 1662
281 Ga0496104_0000760 3300048907 Bacteria 27616
282 Ga0496104_0120614 3300048907 Bacteria 2517
283 Ga0496105_0032402 3300048908 Bacteria 4288
284 Ga0496105_0181116 3300048908 Bacteria 1725
285 Ga0496106_0076861 3300048909 Bacteria 2559
286 Ga0496108_0012759 3300048911 Bacteria 6842
287 Ga0496108_0029837 3300048911 Bacteria 4519
288 Ga0496109_0066977 3300048912 Bacteria 3289
289 Ga0496112_0296532 3300048915 Bacteria 1563
290 Ga0496113_0072746 3300048916 Bacteria 2617
291 Ga0496114_0124038 3300048917 Bacteria 2224
292 Ga0496115_0094220 3300048918 Bacteria 2450
293 Ga0501046_0000203 3300049580 Bacteria 61563
294 Ga0501069_0000019 3300049585 Bacteria 129219
295 Ga0501070_0000010 3300049586 Bacteria 192096
296 Ga0501071_0000912 3300049587 Bacteria 15977
297 Ga0501072_0192184 3300049588 Bacteria 1628
298 Ga0501080_0002193 3300049742 Bacteria 16963
299 nmdc:mga00v17_1578_c1 3300050491 Bacteria 11907
300 nmdc:mga07m45_8177_c1 3300050496 Bacteria 5367
301 nmdc:mga0qj67_41325_c1 3300050509 Bacteria 3626
302 nmdc:mga06r32_105329_c1 3300050510 Bacteria 2771
303 nmdc:mga0n895_2225_c1 3300050512 Bacteria 15000
304 nmdc:mga0rr50_36924_c1 3300050513 Bacteria 3523
305 nmdc:mga08x19_133800_c1 3300050514 Bacteria 1670
306 nmdc:mga08x19_15744_c1 3300050514 Bacteria 4602
307 nmdc:mga08x19_91145_c1 3300050514 Bacteria 2012
308 nmdc:mga0a205_102487_c1 3300050515 Bacteria 2761
309 nmdc:mga0a205_275171_c1 3300050515 Bacteria 1560
310 nmdc:mga0a205_53595_c1 3300050515 Bacteria 3893
311 Ga0495601_0000303 3300053077 Bacteria 26187
312 Ga0495601_0024593 3300053077 Bacteria 3710
313 Ga0495601_0118998 3300053077 Bacteria 1714
314 Ga0495612_0001398 3300053078 Bacteria 9933
315 Ga0495612_0014586 3300053078 Bacteria 3158
316 Ga0495595_0002547 3300053084 Bacteria 7154
317 Ga0495595_0020327 3300053084 Bacteria 2890
318 Ga0495619_0101877 3300053085 Bacteria 1955
319 Ga0495619_0239604 3300053085 Bacteria 1257
320 2644536854 2643221697 Bacteria 3575694
321 2738664479 2738541264 Bacteria 5935393
322 2739143614 2738541356 Bacteria 5935017
323 2739363149 2738543034 Bacteria 6084756
324 2744958731 2744054611 Bacteria 5611514
325 2753265351 2751185782 Bacteria 11227053
326 2808875510 2808606365 Bacteria 4301966
327 2812335072 2811994874 Bacteria 5367947
328 2902797615 2902792274 Bacteria 7270173
329 2939584542 2939582691 Bacteria 7088898
330 2984594044 2984592036 Bacteria 3670284
331 8053946221 8053945823 Bacteria 8962862
332 8055068795 8055066027 Bacteria 9479577
333 8056062589 8056060235 Bacteria 7259403
334 Ga0495592_0034548
335 JGI25404J52841_10000310
336 Ga0070683_100128985
337 Ga0070683_100389956
338 Ga0070691_10068647
339 Ga0070668_100117274
340 Ga0070671_100074612
341 Ga0070659_100023245
342 Ga0070709_10004349
343 Ga0070714_100001257
344 Ga0070714_100098705
345 Ga0070714_100161205
346 Ga0070713_100010553
347 Ga0070713_100087128
348 Ga0070713_100239584
349 Ga0070710_10005957
350 Ga0070710_10019732
351 Ga0070710_10089653
352 Ga0070711_100001371
353 Ga0070711_100047598
354 Ga0070708_100001881
355 Ga0070708_100001952
356 Ga0070708_100049684
357 Ga0070708_100117808
358 Ga0070681_10061046
359 Ga0070706_100007753
360 Ga0070706_100021882
361 Ga0070706_100024209
362 Ga0070707_100030752
363 Ga0070698_100003490
364 Ga0070698_100004511
365 Ga0070698_100071489
366 Ga0070698_100087403
367 Ga0070698_100123365
368 Ga0070698_100208560
369 Ga0070698_100235420
370 Ga0070698_100410236
371 Ga0070699_100000896
372 Ga0070699_100182340
373 Ga0070697_100001714
374 Ga0070697_100005573
375 Ga0070697_100212206
376 Ga0070696_100068795
377 Ga0070696_100134945
378 Ga0068856_100031968
379 Ga0068856_100131919
380 Ga0068864_100153942
381 Ga0068861_100028628
382 Ga0068863_100383533
383 Ga0081538_10000400
384 Ga0081540_1000352
385 Ga0081540_1001842
386 Ga0070717_10002549
387 Ga0070717_10067729
388 Ga0070717_10113070
389 Ga0070717_10158464
390 Ga0075363_100037087
391 Ga0075364_10000310
392 Ga0075364_10035274
393 Ga0075364_10100149
394 Ga0070715_10006978
395 Ga0070712_100036558
396 Ga0070712_100087886
397 Ga0068871_100073309
398 Ga0075428_100039627
399 Ga0075428_100073081
400 Ga0075430_100024061
401 Ga0075431_100127535
402 Ga0075433_10012528
403 Ga0075433_10204194
404 Ga0075434_100219817
405 Ga0075436_100005952
406 Ga0075436_100065033
407 Ga0075436_100188302
408 Ga0075435_100069855
409 Ga0114129_10141718
410 Ga0114129_10216493
411 Ga0105243_10003435
412 Ga0105237_10006839
413 Ga0105239_10046831
414 Ga0105239_10420596
415 Ga0206353_10449119
416 Ga0213875_10000237
417 Ga0213875_10011658
418 Ga0224572_1001973
419 Ga0207692_10001496
420 Ga0207692_10106347
421 Ga0207688_10011350
422 Ga0207699_10003334
423 Ga0207699_10012766
424 Ga0207699_10023686
425 Ga0207684_10001543
426 Ga0207684_10083790
427 Ga0207671_10078914
428 Ga0207693_10010371
429 Ga0207693_10016741
430 Ga0207693_10029710
431 Ga0207693_10094163
432 Ga0207663_10005215
433 Ga0207663_10013562
434 Ga0207663_10107574
435 Ga0207663_10218078
436 Ga0207662_10003119
437 Ga0207657_10024192
438 Ga0207646_10003893
439 Ga0207646_10031784
440 Ga0207646_10060103
441 Ga0207700_10005035
442 Ga0207700_10064599
443 Ga0207700_10286900
444 Ga0207664_10000575
445 Ga0207664_10001348
446 Ga0207664_10033223
447 Ga0207664_10047725
448 Ga0207664_10063017
449 Ga0207664_10076985
450 Ga0207665_10009861
451 Ga0207665_10020810
452 Ga0207689_10003733
453 Ga0207702_10023375
454 Ga0207676_10206874
455 Ga0207675_100176445
456 Ga0207683_10004206
457 Ga0265319_1041883
458 Ga0265318_10006144
459 Ga0265336_10003002
460 Ga0265336_10032553
461 Ga0265338_10000577
462 Ga0265320_10039454
463 Ga0265327_10009075
464 Ga0373929_0010639
465 Ga0373929_0010798
466 Ga0373934_0000054
467 Ga0373934_0006620
468 Ga0373934_0011336
469 Ga0373944_0000487
470 Ga0373951_0021675
471 Ga0373923_0043639
472 Ga0373932_0016055
473 Ga0373936_0009329
474 Ga0373936_0013732
475 Ga0373953_0000101
476 Ga0373953_0001902
477 Ga0373954_0003856
478 Ga0373954_0007433
479 Ga0373956_0000197
480 Ga0373956_0003430
481 Ga0373956_0025859
482 Ga0373956_0076099
483 Ga0373957_0000329
484 Ga0373957_0014556
485 Ga0373943_0000595
486 Ga0373943_0067790
487 Ga0373946_0000361
488 Ga0373946_0001103
489 Ga0373955_0000009
490 Ga0373955_0020911
491 Ga0373955_0056172
492 Ga0373961_0016734
493 Ga0373924_0007586
494 Ga0373931_0021906
495 Ga0373935_0001028
496 Ga0373935_0059042
497 Ga0373935_0078675
498 Ga0373935_0089181
499 Ga0373935_0104309
500 Ga0373927_0002131
501 Ga0373933_0000006
502 Ga0373933_0037471
503 Ga0373933_0044014
504 Ga0373937_0000137
505 Ga0373937_0002235
506 Ga0373937_0057122
507 Ga0373937_0151424
508 Ga0373925_0009765
509 Ga0373925_0028562
510 Ga0373925_0048668
511 Ga0395898_0028382
512 Ga0395905_0231004
513 Ga0436364_0115578
514 Ga0436364_0212173
515 Ga0436364_0501524
516 Ga0436364_1521070
517 Ga0395901_0076166
518 Ga0439465_0033098
519 Ga0439442_000108
520 Ga0450920_000003
521 Ga0450907_001100
522 Ga0439434_0000030
523 Ga0466970_0027433
524 Ga0466970_0097586
525 Ga0466967_0030837
526 Ga0495592_0023628
527 Ga0495592_0063539
528 Ga0495629_0007556
529 Ga0495629_0030138
530 Ga0495629_0156581
531 Ga0495641_0000487
532 Ga0495651_0001950
533 Ga0495651_0020462
534 Ga0495651_0042978
535 Ga0495651_0045749
536 Ga0495653_0000440
537 Ga0495653_0024224
538 Ga0495653_0067978
539 Ga0495653_0070319
540 Ga0495653_0085340
541 Ga0495582_0061425
542 Ga0495662_0008246
543 Ga0495664_0000359
544 Ga0495664_0015684
545 Ga0495596_0023997
546 Ga0495608_0000328
547 Ga0495608_0028150
548 Ga0495618_0011825
549 Ga0495618_0166302
550 Ga0495628_0000136
551 Ga0495644_0005029
552 Ga0495652_0000273
553 Ga0495652_0013283
554 Ga0495640_0047644
555 Ga0495640_0047788
556 Ga0495586_0076016
557 Ga0495587_0000070
558 Ga0495587_0005319
559 Ga0495587_0018378
560 Ga0495645_0009656
561 Ga0495667_0000048
562 Ga0495667_0007481
563 Ga0495667_0040584
564 Ga0495667_0078707
565 Ga0495634_0056683
566 Ga0495634_0057892
567 Ga0495635_0000370
568 Ga0495635_0006125
569 Ga0495588_0006507
570 Ga0495657_0000046
571 Ga0495657_0014242
572 Ga0495657_0021270
573 Ga0495657_0038617
574 Ga0495657_0042863
575 Ga0495599_0000023
576 Ga0495599_0033646
577 Ga0495599_0034848
578 Ga0495599_0043026
579 Ga0495599_0100579
580 Ga0495623_0005043
581 Ga0495646_0012710
582 Ga0495646_0015206
583 Ga0495646_0078307
584 Ga0495647_0030091
585 Ga0495658_0038477
586 Ga0495624_0028758
587 Ga0495600_0059095
588 Ga0495600_0189749
589 Ga0495581_0012149
590 Ga0495604_0000037
591 Ga0495604_0097392
592 Ga0495674_0002352
593 Ga0495676_0013891
594 Ga0495680_0000260
595 Ga0495680_0006085
596 Ga0495680_0006883
597 Ga0495680_0033819
598 Ga0495680_0042472
599 Ga0495675_0000359
600 Ga0495675_0007782
601 Ga0495684_0001227
602 Ga0495684_0013816
603 Ga0495684_0023297
604 Ga0495684_0120161
605 Ga0495684_0150787
606 Ga0495684_0229426
607 Ga0495686_0000003
608 Ga0495686_0027503
609 Ga0495686_0033855
610 Ga0495602_0090019
611 Ga0495602_0129073
612 Ga0495602_0146722
613 Ga0495614_0057986
614 Ga0496104_0000760
615 Ga0496104_0120614
616 Ga0496105_0032402
617 Ga0496105_0181116
618 Ga0496106_0076861
619 Ga0496108_0012759
620 Ga0496108_0029837
621 Ga0496109_0066977
622 Ga0496112_0296532
623 Ga0496113_0072746
624 Ga0496114_0124038
625 Ga0496115_0094220
626 Ga0501046_0000203
627 Ga0501069_0000019
628 Ga0501070_0000010
629 Ga0501071_0000912
630 Ga0501072_0192184
631 Ga0501080_0002193
632 nmdc:mga00v17_1578_c1
633 nmdc:mga07m45_8177_c1
634 nmdc:mga0qj67_41325_c1
635 nmdc:mga06r32_105329_c1
636 nmdc:mga0n895_2225_c1
637 nmdc:mga0rr50_36924_c1
638 nmdc:mga08x19_133800_c1
639 nmdc:mga08x19_15744_c1
640 nmdc:mga08x19_91145_c1
641 nmdc:mga0a205_102487_c1
642 nmdc:mga0a205_275171_c1
643 nmdc:mga0a205_53595_c1
644 Ga0495601_0000303
645 Ga0495601_0024593
646 Ga0495601_0118998
647 Ga0495612_0001398
648 Ga0495612_0014586
649 Ga0495595_0002547
650 Ga0495595_0020327
651 Ga0495619_0101877
652 Ga0495619_0239604
653 2644536854
654 2738664479
655 2739143614
656 2739363149
657 2744958731
658 2753265351
659 2808875510
660 2812335072
661 2902797615
662 2939584542
663 2984594044
664 8053946221
665 8055068795
666 8056062589

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02803

Thiolase_C

Thiolase, C-terminal domain

335

457

0.99

PF00108

Thiolase_N

Thiolase, N-terminal domain

57

328

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4e1l-assembly1.cif.gz_D crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9242 1 395
4e1l-assembly1.cif.gz_C crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9234 1 395
4e1l-assembly1.cif.gz_D crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9192 1 395
1pxt-assembly1.cif.gz_A the 2.8 angstroms structure of peroxisomal 3-ketoacyl-coa thiolase of saccharomyces cerevisiae: a five layered a-b-a-b-a structure, constructed from two core domains of identical topology 0.9166 3 395
4e1l-assembly1.cif.gz_C crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.916 1 395
ID Description Score Start End Superfamily
af_O53422_2_404_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9873 2 396 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9859 269 396 3.40.47.10
af_A0A096MJY8_281_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9854 280 390 3.40.47.10
af_O53422_2_404_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9799 2 396 3.40.47.10
af_O53871_287_399_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.976 280 390 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A4Q3FYE8-F1-model_v4 deleted 0.9905 263 397
AF-A0A543NM75-F1-model_v4 Acetyl-CoA C-acetyltransferase 0.9901 1 397 GO:0003988
GO:0006635
GO:0010124
AF-A0A543NM75-F1-model_v4 Acetyl-CoA C-acetyltransferase 0.9877 1 397 GO:0003988
GO:0006635
GO:0010124
AF-O53422-F1-model_v4 Probable beta-ketoacyl CoA thiolase FadA3 0.9872 1 397 GO:0003985
GO:0005576
GO:0005886
GO:0006631
GO:0009274
AF-A0A519H2S4-F1-model_v4 acetyl-CoA C-acyltransferase (EC 2.3.1.16) 0.9863 265 395 GO:0003985
GO:0006635
GO:0010124

Map