F410314

General Info

Members Datasets Scaffolds Average Seq Length
330 257 660 957

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2832004796|2832008247
Length 1085
Sequence TATRRLLAGATGAIAVAALLVAVPTTATATPVMTAPVSTTPAADELAATAFAGNDYCLGECGEILPPGQNGNATLVEILGNQAFGTLPRHSADQLDKYADLVYGYAGLREEQIDNFFHDAAFGVAPSQVERDYSPRSDVRIVREKATGVPHITGTTRGGTMYGAGYAGAEDRLFTMDLLRHVGRGTLTSFAGGAPGNRALEQSVWRTSPYTETDLAVQVEALRRKGGTRGEQLYADVQEYIAGVNAYIRTCMDNRNCPGEYVLTGHLDSITNAGGPKPFTMTDLIAIAGVVGGLFGGGGGTEMQSALVRIAARAKYGPVEGDRVWQGFRNQNDPETVLTLHDGQSFPYGDASPDAPSVALPDAGSARVEPIVTDATGSATSTSTSNSASELAAALSGLTITPANRGMSNAAVISAEHSATGHPIAVFGPQTGYFSPQLLMVQELQGPGISARGAAFAGLNLYVLLGRGQDYAWSATSSVHDITDTYAVPLCVPGGGTPTTASNHYLFRGQCLAMEELSHVNRWNPTVADSTPAGSYKLVAWRTKLGLVGWRGTVDGRPHAFTQLRSTYGREADSALGFQMFNDPAAMGTAAAFLDSANNVEYAFNWFYVNSTESAYFNSGLNPVRAAGSNPNLPMKAERAYEWQDYNPETGTARYAPRAAHPQSIDQDYYISWNNKQAKDFGAADGNFSFGGVHRGDLLDKPVKAALAAGRKFDRATLTELVQRAGLTDLRGAEVLGELIRVLESQPVTDTALAAEISRLKAWRQAGALRVETAKGSKVYQHAEAIRTFDAWWPLLVRGMFRDPLGPDLYQSLVNTLQINEAPSGLQQGDVSNLPSSANSAQTHKGSAFQYGWWGYVDKDLRAVLGDPVAGGLGRTFCGNGNLGSCRQVLLDTLRTAAGTPAATTYPGDASCAAGDQWCADAIIQSPLGGIKHATIAWQNRPTYQQVVSFPARRGADLTNLAAAAPVSASSSQLGNGAARAVDGDLGTRWASSWSDNQWLRVDLGSVRSVARVVLAWEAAYARSYRIEVSTDGSTWRQVWSTTAGDGGTDVVAFPTQQARYVRMTGLTRGTSYGFSLWEMSVHAH

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
7 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
8 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
10 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
11 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
12 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
13 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
14 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
15 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
18 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
19 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
20 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
21 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
22 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
25 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
33 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
34 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
35 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
36 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
37 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
38 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
39 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
40 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
41 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
42 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
45 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
46 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
47 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
48 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
49 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
53 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
54 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
55 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
56 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
57 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
58 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
59 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
60 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
63 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
64 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
67 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
68 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
69 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
79 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
80 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
85 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
86 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
87 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
88 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
89 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
90 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
91 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
92 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
93 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
94 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
95 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
96 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
97 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
98 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
99 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
100 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
101 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
102 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
103 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
104 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
105 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
108 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
121 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
122 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
126 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
127 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
128 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
129 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
130 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
131 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
132 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
133 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
134 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
135 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
136 2501939600 Micromonospora sp. L5 Isolate Unclassified
137 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
138 2558860280 Kutzneria sp. 744 Isolate Unclassified
139 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
140 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
141 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
142 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
143 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
144 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
145 2643221548 Streptomyces sp. Root55 Isolate Unclassified
146 2643221647 Streptomyces sp. Root369 Isolate Unclassified
147 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
148 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
149 2643221714 Streptomyces sp. Root264 Isolate Unclassified
150 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
151 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
152 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
153 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
154 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
155 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
156 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
157 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
158 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
159 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
160 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
161 2808606448 Streptomyces sp. 193411 Isolate Unclassified
162 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
163 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
164 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
165 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
166 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
167 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
168 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
169 2855683550 Micromonospora sp. RP3T Isolate Unclassified
170 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
171 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
172 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
173 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
174 2858868258 Micromonospora sp. MH33 Isolate Unclassified
175 2858882152 Micromonospora noduli MED15 Isolate Nodule
176 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
177 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
178 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
179 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
180 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
181 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
182 2862574272 Streptomyces sp. AcE210 Isolate Nodule
183 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
184 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
185 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
186 2867428634 Streptomyces sp. RP5T Isolate Unclassified
187 2867475112 Streptomyces sp. TM32 Isolate Unclassified
188 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
189 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
190 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
191 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
192 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
193 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
194 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
195 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
196 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
197 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
198 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
199 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
200 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
201 2891562705 Microbispora tritici MT50 Isolate Unclassified
202 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
203 2902582711 Micromonospora sp. AP08 Isolate Unclassified
204 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
205 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
206 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
207 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified
208 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
209 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
210 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
211 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
212 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
213 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
214 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
215 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
216 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
217 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
218 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
219 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
220 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
221 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
222 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
223 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
224 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
225 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
226 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
227 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
228 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
229 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
230 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
231 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
232 649633069 Micromonospora sp. L5 Isolate Unclassified
233 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
234 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
235 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
236 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
237 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
238 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
239 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
240 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
241 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
242 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
243 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
244 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
245 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
246 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
247 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
248 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
249 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
250 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
251 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
252 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
253 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
254 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
255 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
256 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere
257 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 62.12
Metatranscriptomes 0.61
Isolates 37.27

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.55
Nodule 2.42
Rhizoplane 0.91
Rhizosphere 62.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10008682 3300001989 Bacteria 3790
2 Ga0070668_100000090 3300005347 Bacteria 56882
3 Ga0070668_100000336 3300005347 Bacteria 31005
4 Ga0070714_100006749 3300005435 Bacteria 8895
5 Ga0070710_10000430 3300005437 Bacteria 19665
6 Ga0070663_100002394 3300005455 Bacteria 10543
7 Ga0068860_100005798 3300005843 Bacteria 12435
8 Ga0068860_100016444 3300005843 Bacteria 7212
9 Ga0081540_1002999 3300005983 Bacteria 13532
10 Ga0081539_10000031 3300005985 Bacteria 313232
11 Ga0075363_100001379 3300006048 Bacteria 9155
12 Ga0075364_10014291 3300006051 Bacteria 4904
13 Ga0075367_10005879 3300006178 Bacteria 6149
14 Ga0075428_100000024 3300006844 Bacteria 126990
15 Ga0075428_100003007 3300006844 Bacteria 18409
16 Ga0075428_100059832 3300006844 Bacteria 4170
17 Ga0075430_100006388 3300006846 Bacteria 9938
18 Ga0075431_100006051 3300006847 Bacteria 11997
19 Ga0075429_100004472 3300006880 Bacteria 12028
20 Ga0114129_10001352 3300009147 Bacteria 32900
21 Ga0114129_10002671 3300009147 Bacteria 24824
22 Ga0114129_10064475 3300009147 Bacteria 5113
23 Ga0105238_10017210 3300009551 Bacteria 7343
24 Ga0163163_10072655 3300014325 Bacteria 3429
25 Ga0182008_10001122 3300014497 Bacteria 18432
26 Ga0182007_10000452 3300015262 Bacteria 24843
27 Ga0183367_1010 3300015688 Bacteria 416164
28 Ga0206354_10863041 3300020081 Bacteria 3264
29 Ga0224712_10000388 3300022467 Bacteria 8567
30 Ga0207426_1001268 3300025302 Bacteria 22033
31 Ga0207426_1001323 3300025302 Bacteria 21124
32 Ga0207692_10005130 3300025898 Bacteria 5226
33 Ga0207694_10027115 3300025924 Bacteria 4363
34 Ga0207664_10032991 3300025929 Bacteria 3974
35 Ga0207668_10007571 3300025972 Bacteria 6463
36 Ga0207668_10013219 3300025972 Bacteria 5075
37 Ga0207678_10005994 3300026067 Bacteria 10815
38 Ga0268265_10026934 3300028380 Bacteria 4096
39 Ga0268264_10004501 3300028381 Bacteria 11889
40 Ga0307517_10003570 3300028786 Bacteria 24142
41 Ga0307517_10005410 3300028786 Bacteria 19253
42 Ga0307515_10000032 3300028794 Bacteria 358317
43 Ga0307515_10001030 3300028794 Bacteria 63698
44 Ga0307515_10001087 3300028794 Bacteria 62233
45 Ga0307515_10027474 3300028794 Bacteria 9726
46 Ga0307515_10037915 3300028794 Bacteria 7730
47 Ga0307511_10000282 3300030521 Bacteria 53455
48 Ga0307511_10003584 3300030521 Bacteria 15903
49 Ga0307512_10004869 3300030522 Bacteria 14385
50 Ga0307512_10013676 3300030522 Bacteria 7592
51 Ga0307513_10002699 3300031456 Bacteria 24420
52 Ga0307513_10006824 3300031456 Bacteria 14878
53 Ga0307513_10017619 3300031456 Bacteria 8561
54 Ga0307509_10018246 3300031507 Bacteria 8048
55 Ga0307509_10018826 3300031507 Bacteria 7901
56 Ga0307509_10038949 3300031507 Bacteria 5181
57 Ga0307508_10001243 3300031616 Bacteria 29109
58 Ga0307508_10004097 3300031616 Bacteria 14380
59 Ga0307508_10017827 3300031616 Bacteria 6455
60 Ga0307508_10030435 3300031616 Bacteria 4879
61 Ga0307508_10033581 3300031616 Bacteria 4631
62 Ga0307514_10010458 3300031649 Bacteria 7754
63 Ga0307516_10002640 3300031730 Bacteria 23723
64 Ga0307516_10003084 3300031730 Bacteria 21689
65 Ga0307516_10033845 3300031730 Bacteria 5140
66 Ga0307405_10003788 3300031731 Bacteria 7027
67 Ga0307518_10000195 3300031838 Bacteria 46045
68 Ga0307416_100010104 3300032002 Bacteria 6218
69 Ga0307415_100000380 3300032126 Bacteria 18831
70 Ga0307507_10000016 3300033179 Bacteria 225984
71 Ga0307507_10004649 3300033179 Bacteria 23876
72 Ga0307507_10027946 3300033179 Bacteria 6028
73 Ga0307510_10037691 3300033180 Bacteria 5360
74 Ga0373942_0000624 3300035207 Bacteria 9917
75 Ga0373962_0000466 3300035242 Bacteria 8943
76 Ga0373935_0001362 3300035692 Bacteria 13539
77 Ga0395900_0044213 3300037418 Bacteria 4590
78 Ga0395898_0006487 3300037466 Bacteria 12496
79 Ga0395898_0012967 3300037466 Bacteria 8594
80 Ga0395898_0037883 3300037466 Bacteria 4780
81 Ga0439436_0000159 3300041404 Bacteria 15810
82 Ga0451837_1184566 3300041494 Bacteria 5374
83 Ga0451843_0855456 3300041509 Bacteria 4673
84 Ga0451853_1407352 3300041512 Bacteria 7500
85 Ga0451853_1823046 3300041512 Bacteria 5308
86 Ga0439457_000263 3300042014 Bacteria 14393
87 Ga0450894_000542 3300042131 Bacteria 6409
88 Ga0439458_0000204 3300042157 Bacteria 13742
89 Ga0466969_0005625 3300044656 Bacteria 6664
90 Ga0466972_0000495 3300044658 Bacteria 19814
91 Ga0466972_0000971 3300044658 Bacteria 13812
92 Ga0466966_0000145 3300044684 Bacteria 45112
93 Ga0466966_0004174 3300044684 Bacteria 9542
94 Ga0466961_0002152 3300044693 Bacteria 12247
95 Ga0466961_0003499 3300044693 Bacteria 9790
96 Ga0466961_0009197 3300044693 Bacteria 6291
97 Ga0466961_0026979 3300044693 Bacteria 3693
98 Ga0466963_0000450 3300044694 Bacteria 19035
99 Ga0466963_0001800 3300044694 Bacteria 11666
100 Ga0466971_0002935 3300044719 Bacteria 7230
101 Ga0466971_0006403 3300044719 Bacteria 5113
102 Ga0466970_0000074 3300044765 Bacteria 40311
103 Ga0466970_0003635 3300044765 Bacteria 7521
104 Ga0466970_0011904 3300044765 Bacteria 4439
105 Ga0466957_0000836 3300044842 Bacteria 15738
106 Ga0466960_0001911 3300044901 Bacteria 7678
107 Ga0466960_0005191 3300044901 Bacteria 5147
108 Ga0466959_0003444 3300045049 Bacteria 10354
109 Ga0466959_0005174 3300045049 Bacteria 8888
110 Ga0466959_0051636 3300045049 Bacteria 3014
111 Ga0466958_0014933 3300045836 Bacteria 4440
112 Ga0495592_0004419 3300046454 Bacteria 10289
113 Ga0495603_0000249 3300046455 Bacteria 28144
114 Ga0495603_0002468 3300046455 Bacteria 10877
115 Ga0495603_0003306 3300046455 Bacteria 9597
116 Ga0495629_0000979 3300046459 Bacteria 22914
117 Ga0495629_0003792 3300046459 Bacteria 11388
118 Ga0495629_0004569 3300046459 Bacteria 10355
119 Ga0495641_0003071 3300046461 Bacteria 12752
120 Ga0495651_0017340 3300046462 Bacteria 5577
121 Ga0495651_0046695 3300046462 Bacteria 3351
122 Ga0495580_0031288 3300046472 Bacteria 3846
123 Ga0495662_0000547 3300046476 Bacteria 17232
124 Ga0495664_0025677 3300046477 Bacteria 3430
125 Ga0495607_0005120 3300046501 Bacteria 9478
126 Ga0495583_0015059 3300046506 Bacteria 4226
127 Ga0495606_0005963 3300046507 Bacteria 11429
128 Ga0495628_0026808 3300046516 Bacteria 4692
129 Ga0495630_0031023 3300046517 Bacteria 3978
130 Ga0495631_0002302 3300046518 Bacteria 10903
131 Ga0495632_0007466 3300046519 Bacteria 6864
132 Ga0495643_0005836 3300046522 Bacteria 8237
133 Ga0495652_0003012 3300046529 Bacteria 16905
134 Ga0495652_0022890 3300046529 Bacteria 5543
135 Ga0495652_0055987 3300046529 Bacteria 3351
136 Ga0495665_0014252 3300046531 Bacteria 4289
137 Ga0495640_0004520 3300046533 Bacteria 11094
138 Ga0495622_0007584 3300046557 Bacteria 5039
139 Ga0495668_0000324 3300046616 Bacteria 65441
140 Ga0495634_0006929 3300046642 Bacteria 8563
141 Ga0495625_0000142 3300046660 Bacteria 110278
142 Ga0495625_0014002 3300046660 Bacteria 6423
143 Ga0495625_0036783 3300046660 Bacteria 3595
144 Ga0495661_0031434 3300046665 Bacteria 3369
145 Ga0495657_0003269 3300046675 Bacteria 13312
146 Ga0495657_0017029 3300046675 Bacteria 5282
147 Ga0495646_0001219 3300046680 Bacteria 15076
148 Ga0495658_0014841 3300046683 Bacteria 3987
149 Ga0495613_0000842 3300046689 Bacteria 23673
150 Ga0495613_0004789 3300046689 Bacteria 10153
151 Ga0495604_0003396 3300047317 Bacteria 12695
152 Ga0495604_0020684 3300047317 Bacteria 5254
153 Ga0495676_0004554 3300047321 Bacteria 12682
154 Ga0495676_0005621 3300047321 Bacteria 11493
155 Ga0495687_004025 3300047443 Bacteria 10206
156 Ga0495675_0009082 3300047444 Bacteria 6178
157 Ga0495685_000676 3300047447 Bacteria 10401
158 Ga0495685_008018 3300047447 Bacteria 3498
159 Ga0495681_0000784 3300047470 Bacteria 24436
160 Ga0495614_0000263 3300048089 Bacteria 20482
161 Ga0495626_0000029 3300048091 Bacteria 202868
162 Ga0495626_0004527 3300048091 Bacteria 8500
163 Ga0496108_0000885 3300048911 Bacteria 23337
164 Ga0496114_0006510 3300048917 Bacteria 9203
165 Ga0501031_0005582 3300049568 Bacteria 8197
166 Ga0501031_0010145 3300049568 Bacteria 6139
167 Ga0501032_0009607 3300049569 Bacteria 7010
168 Ga0501033_0003654 3300049570 Bacteria 12543
169 Ga0501034_0031161 3300049571 Bacteria 5419
170 Ga0501036_0003493 3300049572 Bacteria 12563
171 Ga0501036_0043620 3300049572 Bacteria 3799
172 Ga0501037_0009742 3300049573 Bacteria 7054
173 Ga0501037_0014660 3300049573 Bacteria 5766
174 Ga0501037_0029932 3300049573 Bacteria 4022
175 Ga0501038_0008834 3300049574 Bacteria 9243
176 Ga0501038_0032988 3300049574 Bacteria 4562
177 Ga0501043_0009546 3300049579 Bacteria 7606
178 Ga0501047_0000118 3300049581 Bacteria 96347
179 Ga0501047_0087368 3300049581 Bacteria 2995
180 Ga0501048_0033026 3300049582 Bacteria 3739
181 Ga0501035_0027095 3300049822 Bacteria 5239
182 Ga0501035_0032993 3300049822 Bacteria 4709
183 Ga0501035_0039484 3300049822 Bacteria 4271
184 Ga0501044_0004393 3300049823 Bacteria 15775
185 nmdc:mga03n38_410_c1 3300050490 Bacteria 10659
186 nmdc:mga06z11_3361_c1 3300050494 Bacteria 6194
187 nmdc:mga05p37_1501_c1 3300050507 Bacteria 27103
188 nmdc:mga05p37_2386_c1 3300050507 Bacteria 21856
189 nmdc:mga05p37_42833_c1 3300050507 Bacteria 5565
190 nmdc:mga09592_398_c1 3300050508 Bacteria 31870
191 nmdc:mga0qj67_7078_c1 3300050509 Bacteria 8274
192 nmdc:mga0qj67_82_c2 3300050509 Bacteria 31888
193 nmdc:mga0qj67_925_c1 3300050509 Bacteria 20198
194 nmdc:mga06r32_128_c1 3300050510 Bacteria 30752
195 nmdc:mga06r32_3738_c1 3300050510 Bacteria 13611
196 nmdc:mga06r32_896_c1 3300050510 Bacteria 26535
197 Ga0495612_0001615 3300053078 Bacteria 9281
198 Ga0500646_0000046 3300053090 Bacteria 33395
199 Ga0500650_0006857 3300053098 Bacteria 4384
200 Ga0500654_007497 3300053099 Bacteria 7575
201 Ga0500652_002753 3300053131 Bacteria 5306
202 Ga0500559_0005046 3300053136 Bacteria 6117
203 Ga0500561_0000209 3300053137 Bacteria 10641
204 Ga0500616_0000097 3300053153 Bacteria 178988
205 Ga0500616_0012047 3300053153 Bacteria 5075
206 Ga0466962_0001956 3300061719 Bacteria 9704
207 Ga0466962_0003565 3300061719 Bacteria 7414
208 2832008247 2832004796 Bacteria 6538017
209 2501944109 2501939600 Bacteria 6907073
210 2547406737 2547132111 Bacteria 8013147
211 2559427265 2558860280 Bacteria 11429938
212 2585296795 2582581312 Bacteria 7308206
213 2585303810 2582581313 Bacteria 10042643
214 2585315513 2582581314 Bacteria 11452267
215 2586057413 2585427649 Bacteria 9053857
216 2616695877 2616644814 Bacteria 11555299
217 2616900566 2616644941 Bacteria 8510691
218 2643759968 2643221548 Bacteria 8053412
219 2644268280 2643221647 Bacteria 10741251
220 2644438467 2643221678 Bacteria 9540101
221 2644460336 2643221682 Bacteria 6743283
222 2644629255 2643221714 Bacteria 9015452
223 2753074409 2751185734 Bacteria 8863695
224 2753263737 2751185782 Bacteria 11227053
225 2772642264 2772190715 Bacteria 6959372
226 2784586941 2784132148 Bacteria 8627943
227 2785345500 2784746763 Bacteria 9783172
228 2785367388 2784746768 Bacteria 10036182
229 2786668434 2786546132 Bacteria 10419719
230 2793978406 2791355406 Bacteria 11364898
231 2804844006 2802429296 Bacteria 7227771
232 2808847893 2808606359 Bacteria 9866990
233 2808918643 2808606375 Bacteria 9466072
234 2809230508 2808606448 Bacteria 8656184
235 2809585572 2808606522 Bacteria 9488490
236 2812360095 2811994879 Bacteria 9313447
237 2819696619 2818991463 Bacteria 7948711
238 2831937399 2831935698 Bacteria 5963223
239 2852637929 2852635781 Bacteria 8251373
240 2855675755 2855670206 Bacteria 7120389
241 2855679615 2855676851 Bacteria 7063653
242 2855685594 2855683550 Bacteria 7134265
243 2856742480 2856741275 Bacteria 8096094
244 2856863005 2856858025 Bacteria 7255264
245 2857295298 2857288857 Bacteria 7189066
246 2858853205 2858848962 Bacteria 6963058
247 2858869620 2858868258 Bacteria 7683772
248 2858883073 2858882152 Bacteria 7230291
249 2858895435 2858888857 Bacteria 7060307
250 2858901685 2858895516 Bacteria 7378898
251 2858906681 2858902515 Bacteria 7086037
252 2862180469 2862178590 Bacteria 8583590
253 2862289401 2862281513 Bacteria 9621493
254 2862392249 2862382967 Bacteria 10317375
255 2862583466 2862574272 Bacteria 10567477
256 2863406757 2863404153 Bacteria 9672205
257 2866067916 2866065130 Bacteria 6518152
258 2866553248 2866552031 Bacteria 5824618
259 2867430214 2867428634 Bacteria 9590268
260 2867479971 2867475112 Bacteria 6909112
261 2867511898 2867507094 Bacteria 6506033
262 2869052438 2869048445 Bacteria 6875584
263 2869065602 2869061728 Bacteria 7112407
264 2869068969 2869068681 Bacteria 7205615
265 2870728859 2870721527 Bacteria 9689237
266 2873157471 2873151551 Bacteria 8625867
267 2873319303 2873314349 Bacteria 8512634
268 2877683162 2877676314 Bacteria 9512378
269 2880490157 2880489317 Bacteria 7096270
270 2880502228 2880495981 Bacteria 7340502
271 2887482983 2887478801 Bacteria 8972725
272 2891403619 2891395885 Bacteria 9251614
273 2891556128 2891554331 Bacteria 8812224
274 2891569392 2891562705 Bacteria 8039471
275 2899360064 2899359706 Bacteria 10940472
276 2902583333 2902582711 Bacteria 6187705
277 2912722173 2912715099 Bacteria 9460473
278 2912725894 2912723979 Bacteria 8557534
279 2915774997 2915768154 Bacteria 8424322
280 2917744920 2917736166 Bacteria 9690793
281 2919473674 2919468124 Bacteria 9133025
282 2929230767 2929226422 Bacteria 7248583
283 2946065792 2946064051 Bacteria 8957905
284 2946074137 2946072368 Bacteria 8999607
285 2947231603 2947224130 Bacteria 9938529
286 2954388379 2954380949 Bacteria 10050426
287 2954674710 2954673503 Bacteria 9685905
288 2954689423 2954682443 Bacteria 9862841
289 2954699194 2954691527 Bacteria 10720516
290 2954703024 2954701450 Bacteria 10834262
291 2954718147 2954711539 Bacteria 10867210
292 2954728116 2954721474 Bacteria 10456478
293 2954733691 2954731030 Bacteria 10243860
294 2954747012 2954740390 Bacteria 10229294
295 2954752575 2954749733 Bacteria 10366972
296 2954766126 2954759201 Bacteria 9358192
297 2966604182 2966598605 Bacteria 7676064
298 2990062693 2990059506 Bacteria 9321252
299 2997454108 2997451912 Bacteria 8492419
300 2997601848 2997600082 Bacteria 9896405
301 3006325994 3006321560 Bacteria 8247479
302 3006393616 3006393351 Bacteria 6615579
303 3006430513 3006425503 Bacteria 6491253
304 3006495252 3006493962 Bacteria 8825450
305 649815221 649633069 Bacteria 6962533
306 8001782073 8001781756 Bacteria 9586736
307 8003314652 8003314358 Bacteria 10575343
308 8003833940 8003830390 Bacteria 6541657
309 8003860489 8003856774 Bacteria 7675274
310 8003871788 8003870546 Bacteria 7396674
311 8008561552 8008558824 Bacteria 10610750
312 8008580539 8008574985 Bacteria 7815457
313 8023631612 8023623736 Bacteria 8593882
314 8025419504 8025413630 Bacteria 7014048
315 8047714379 8047710418 Bacteria 11023148
316 8047900065 8047893842 Bacteria 11723082
317 8048131149 8048127548 Bacteria 11053136
318 8048358863 8048356638 Bacteria 11044339
319 8048377012 8048369669 Bacteria 11666822
320 8048386067 8048379754 Bacteria 11877923
321 8048412100 8048406513 Bacteria 8936924
322 8054167127 8054160619 Bacteria 7783213
323 8054708713 8054704163 Bacteria 7247792
324 8054734240 8054727385 Bacteria 7558670
325 8054735781 8054734606 Bacteria 6947278
326 8055068493 8055066027 Bacteria 9479577
327 8055181453 8055172936 Bacteria 9305943
328 8056061818 8056060235 Bacteria 7259403
329 8056212531 8056207758 Bacteria 8639239
330 8056835481 8056829672 Bacteria 9045328
331 JGI24739J22299_10008682
332 Ga0070668_100000090
333 Ga0070668_100000336
334 Ga0070714_100006749
335 Ga0070710_10000430
336 Ga0070663_100002394
337 Ga0068860_100005798
338 Ga0068860_100016444
339 Ga0081540_1002999
340 Ga0081539_10000031
341 Ga0075363_100001379
342 Ga0075364_10014291
343 Ga0075367_10005879
344 Ga0075428_100000024
345 Ga0075428_100003007
346 Ga0075428_100059832
347 Ga0075430_100006388
348 Ga0075431_100006051
349 Ga0075429_100004472
350 Ga0114129_10001352
351 Ga0114129_10002671
352 Ga0114129_10064475
353 Ga0105238_10017210
354 Ga0163163_10072655
355 Ga0182008_10001122
356 Ga0182007_10000452
357 Ga0183367_1010
358 Ga0206354_10863041
359 Ga0224712_10000388
360 Ga0207426_1001268
361 Ga0207426_1001323
362 Ga0207692_10005130
363 Ga0207694_10027115
364 Ga0207664_10032991
365 Ga0207668_10007571
366 Ga0207668_10013219
367 Ga0207678_10005994
368 Ga0268265_10026934
369 Ga0268264_10004501
370 Ga0307517_10003570
371 Ga0307517_10005410
372 Ga0307515_10000032
373 Ga0307515_10001030
374 Ga0307515_10001087
375 Ga0307515_10027474
376 Ga0307515_10037915
377 Ga0307511_10000282
378 Ga0307511_10003584
379 Ga0307512_10004869
380 Ga0307512_10013676
381 Ga0307513_10002699
382 Ga0307513_10006824
383 Ga0307513_10017619
384 Ga0307509_10018246
385 Ga0307509_10018826
386 Ga0307509_10038949
387 Ga0307508_10001243
388 Ga0307508_10004097
389 Ga0307508_10017827
390 Ga0307508_10030435
391 Ga0307508_10033581
392 Ga0307514_10010458
393 Ga0307516_10002640
394 Ga0307516_10003084
395 Ga0307516_10033845
396 Ga0307405_10003788
397 Ga0307518_10000195
398 Ga0307416_100010104
399 Ga0307415_100000380
400 Ga0307507_10000016
401 Ga0307507_10004649
402 Ga0307507_10027946
403 Ga0307510_10037691
404 Ga0373942_0000624
405 Ga0373962_0000466
406 Ga0373935_0001362
407 Ga0395900_0044213
408 Ga0395898_0006487
409 Ga0395898_0012967
410 Ga0395898_0037883
411 Ga0439436_0000159
412 Ga0451837_1184566
413 Ga0451843_0855456
414 Ga0451853_1407352
415 Ga0451853_1823046
416 Ga0439457_000263
417 Ga0450894_000542
418 Ga0439458_0000204
419 Ga0466969_0005625
420 Ga0466972_0000495
421 Ga0466972_0000971
422 Ga0466966_0000145
423 Ga0466966_0004174
424 Ga0466961_0002152
425 Ga0466961_0003499
426 Ga0466961_0009197
427 Ga0466961_0026979
428 Ga0466963_0000450
429 Ga0466963_0001800
430 Ga0466971_0002935
431 Ga0466971_0006403
432 Ga0466970_0000074
433 Ga0466970_0003635
434 Ga0466970_0011904
435 Ga0466957_0000836
436 Ga0466960_0001911
437 Ga0466960_0005191
438 Ga0466959_0003444
439 Ga0466959_0005174
440 Ga0466959_0051636
441 Ga0466958_0014933
442 Ga0495592_0004419
443 Ga0495603_0000249
444 Ga0495603_0002468
445 Ga0495603_0003306
446 Ga0495629_0000979
447 Ga0495629_0003792
448 Ga0495629_0004569
449 Ga0495641_0003071
450 Ga0495651_0017340
451 Ga0495651_0046695
452 Ga0495580_0031288
453 Ga0495662_0000547
454 Ga0495664_0025677
455 Ga0495607_0005120
456 Ga0495583_0015059
457 Ga0495606_0005963
458 Ga0495628_0026808
459 Ga0495630_0031023
460 Ga0495631_0002302
461 Ga0495632_0007466
462 Ga0495643_0005836
463 Ga0495652_0003012
464 Ga0495652_0022890
465 Ga0495652_0055987
466 Ga0495665_0014252
467 Ga0495640_0004520
468 Ga0495622_0007584
469 Ga0495668_0000324
470 Ga0495634_0006929
471 Ga0495625_0000142
472 Ga0495625_0014002
473 Ga0495625_0036783
474 Ga0495661_0031434
475 Ga0495657_0003269
476 Ga0495657_0017029
477 Ga0495646_0001219
478 Ga0495658_0014841
479 Ga0495613_0000842
480 Ga0495613_0004789
481 Ga0495604_0003396
482 Ga0495604_0020684
483 Ga0495676_0004554
484 Ga0495676_0005621
485 Ga0495687_004025
486 Ga0495675_0009082
487 Ga0495685_000676
488 Ga0495685_008018
489 Ga0495681_0000784
490 Ga0495614_0000263
491 Ga0495626_0000029
492 Ga0495626_0004527
493 Ga0496108_0000885
494 Ga0496114_0006510
495 Ga0501031_0005582
496 Ga0501031_0010145
497 Ga0501032_0009607
498 Ga0501033_0003654
499 Ga0501034_0031161
500 Ga0501036_0003493
501 Ga0501036_0043620
502 Ga0501037_0009742
503 Ga0501037_0014660
504 Ga0501037_0029932
505 Ga0501038_0008834
506 Ga0501038_0032988
507 Ga0501043_0009546
508 Ga0501047_0000118
509 Ga0501047_0087368
510 Ga0501048_0033026
511 Ga0501035_0027095
512 Ga0501035_0032993
513 Ga0501035_0039484
514 Ga0501044_0004393
515 nmdc:mga03n38_410_c1
516 nmdc:mga06z11_3361_c1
517 nmdc:mga05p37_1501_c1
518 nmdc:mga05p37_2386_c1
519 nmdc:mga05p37_42833_c1
520 nmdc:mga09592_398_c1
521 nmdc:mga0qj67_7078_c1
522 nmdc:mga0qj67_82_c2
523 nmdc:mga0qj67_925_c1
524 nmdc:mga06r32_128_c1
525 nmdc:mga06r32_3738_c1
526 nmdc:mga06r32_896_c1
527 Ga0495612_0001615
528 Ga0500646_0000046
529 Ga0500650_0006857
530 Ga0500654_007497
531 Ga0500652_002753
532 Ga0500559_0005046
533 Ga0500561_0000209
534 Ga0500616_0000097
535 Ga0500616_0012047
536 Ga0466962_0001956
537 Ga0466962_0003565
538 2832008247
539 2501944109
540 2547406737
541 2559427265
542 2585296795
543 2585303810
544 2585315513
545 2586057413
546 2616695877
547 2616900566
548 2643759968
549 2644268280
550 2644438467
551 2644460336
552 2644629255
553 2753074409
554 2753263737
555 2772642264
556 2784586941
557 2785345500
558 2785367388
559 2786668434
560 2793978406
561 2804844006
562 2808847893
563 2808918643
564 2809230508
565 2809585572
566 2812360095
567 2819696619
568 2831937399
569 2852637929
570 2855675755
571 2855679615
572 2855685594
573 2856742480
574 2856863005
575 2857295298
576 2858853205
577 2858869620
578 2858883073
579 2858895435
580 2858901685
581 2858906681
582 2862180469
583 2862289401
584 2862392249
585 2862583466
586 2863406757
587 2866067916
588 2866553248
589 2867430214
590 2867479971
591 2867511898
592 2869052438
593 2869065602
594 2869068969
595 2870728859
596 2873157471
597 2873319303
598 2877683162
599 2880490157
600 2880502228
601 2887482983
602 2891403619
603 2891556128
604 2891569392
605 2899360064
606 2902583333
607 2912722173
608 2912725894
609 2915774997
610 2917744920
611 2919473674
612 2929230767
613 2946065792
614 2946074137
615 2947231603
616 2954388379
617 2954674710
618 2954689423
619 2954699194
620 2954703024
621 2954718147
622 2954728116
623 2954733691
624 2954747012
625 2954752575
626 2954766126
627 2966604182
628 2990062693
629 2997454108
630 2997601848
631 3006325994
632 3006393616
633 3006430513
634 3006495252
635 649815221
636 8001782073
637 8003314652
638 8003833940
639 8003860489
640 8003871788
641 8008561552
642 8008580539
643 8023631612
644 8025419504
645 8047714379
646 8047900065
647 8048131149
648 8048358863
649 8048377012
650 8048386067
651 8048412100
652 8054167127
653 8054708713
654 8054734240
655 8054735781
656 8055068493
657 8055181453
658 8056061818
659 8056212531
660 8056835481

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22633

F5_F8_type_C_2

NedA-like, galactose-binding domain

980

1064

0.97

PF00754

F5_F8_type_C

F5/8 type C domain

966

1080

0.89

PF01804

Penicil_amidase

Penicillin amidase

138

943

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
8brt-assembly1.cif.gz_A crystal structure of a variant of penicillin g acylase from bacillaceae i. s. sp. fjat-27231 with reduced surface entropy and additionally engineered crystal contact 0.8662 134 340
1kec-assembly1.cif.gz_A penicillin acylase mutant with phenyl proprionic acid 0.8631 135 339
6nvy-assembly2.cif.gz_C crystal structure of penicillin g acylase from bacillus thermotolerans 0.8625 136 340
6nvw-assembly1.cif.gz_A crystal structure of penicillin g acylase from bacillus megaterium 0.8599 137 340
8brs-assembly1.cif.gz_A crystal structure of a variant of penicillin g acylase from bacillaceae i. s. sp. fjat-27231 with reduced surface entropy and additionally engineered crystal contact. 0.8595 129 340
ID Description Score Start End Superfamily
4hstA01 Mainly Alpha;Orthogonal Bundle;Penicillin Amidohydrolase; domain 1;Penicillin Amidohydrolase, domain 1 0.8225 130 290 1.10.439.10
1fxhB01 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.8205 394 669 3.60.20.10
3ml0B01 Alpha Beta;4-Layer Sandwich;Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1;Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.7597 384 668 3.60.20.10
4hstA01 Mainly Alpha;Orthogonal Bundle;Penicillin Amidohydrolase; domain 1;Penicillin Amidohydrolase, domain 1 0.7581 130 290 1.10.439.10
4wktA00 Mainly Alpha;Orthogonal Bundle;Penicillin Amidohydrolase; domain 1;Penicillin Amidohydrolase, domain 1 0.7133 137 289 1.10.439.10
ID Description Score Start End GO Terms
AF-A0A1S6JKK9-F1-model_v4 Penicillin acylase 0.9572 47 904 GO:0016811
GO:0017000
AF-A0A4D4MLC1-F1-model_v4 Penicillin amidase 0.9463 515 904 GO:0016787
GO:0017000
AF-A0A1C4P4R2-F1-model_v4 Penicillin amidase 0.9461 398 904 GO:0016787
GO:0017000
AF-A0A0L0KQL1-F1-model_v4 Penicillin acylase 0.9433 36 893 GO:0016811
GO:0017000
AF-A0A1C4P4R2-F1-model_v4 Penicillin amidase 0.9425 398 904 GO:0016787
GO:0017000

Map