F410256

General Info

Members Datasets Scaffolds Average Seq Length
330 238 660 457

Family's Representative Sequence

Representative Sequence 3300048911|Ga0496108_0037553|Ga0496108_0037553_775_2256
Length 493
Sequence MSSPRHSQRPDADATGGALTPAPPDAVARGARAQQDEGVEVNEITRDVVIVGAGAAGTTAANELRKAGLSVAILEARDRVGGRLWTDVVDGAMLEIGGQWVSPDQDALKETIEELGLETYDRYREGESVYIGTDGELTRFTGDIFPVAAETEAEIVRLIDVLDALVAQIDPERPWEHPDADALDRISFEAWLEEQTQDQEARDNIALFIAGAMLTKPAYAFSALQALLMAASAGSFSHLVDADFILDKRVIGGLQQVPLLLAERLGDDVFLGQPVNEVHWSDSGIKVVTDKGLEVNARFVILAHAPILYPWIEFSPPLPRLKQQLHQHISMGFVIKVHAVYDRPFWREQGLSGTAFSPYEISHEAYDNTNHGDERGTLVGFVSDRNADDLFRVSAEERKARIHESLSHYFGPEAKSPLVYFESDWGAEEWTRGAYAASFDLGGLTRYGADLRTPVGPIHFACSDMAGAGYQHVDGAIRMGRLVAANIIAQART

Samples

Sample ID Description Type Environment
1 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
4 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
5 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
6 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
7 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
23 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
24 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
27 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
31 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
34 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
35 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
37 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
41 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
42 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
43 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
46 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
47 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
49 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
57 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
58 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
59 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
62 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
65 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
66 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
67 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
68 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
69 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
70 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
71 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
74 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
80 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
81 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
82 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
83 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
84 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
85 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
86 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
87 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
88 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
89 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
92 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
96 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
97 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
98 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
112 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
115 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
118 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
119 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
120 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
121 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
122 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
123 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
124 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
125 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
126 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
127 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
128 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
129 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
130 2643221549 Agromyces sp. Root1464 Isolate Unclassified
131 2643221553 Microbacterium sp. Root553 Isolate Unclassified
132 2643221566 Microbacterium sp. Root166 Isolate Unclassified
133 2643221572 Leifsonia sp. Root60 Isolate Unclassified
134 2643221575 Microbacterium sp. Root61 Isolate Unclassified
135 2643221597 Microbacterium sp. Root180 Isolate Unclassified
136 2643221615 Nocardioides sp. Root224 Isolate Unclassified
137 2643221616 Leifsonia sp. Root227 Isolate Unclassified
138 2643221617 Nocardioides sp. Root79 Isolate Unclassified
139 2643221619 Agromyces sp. Root81 Isolate Unclassified
140 2643221620 Nocardioides sp. Root240 Isolate Unclassified
141 2643221630 Microbacterium sp. Root322 Isolate Unclassified
142 2643221649 Leifsonia sp. Root4 Isolate Unclassified
143 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
144 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
145 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
146 2690315906 Arthrobacter sp. OY3WO11 Isolate Unclassified
147 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
148 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
149 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
150 2738541305 Nocardioides sp. CF167 Isolate Unclassified
151 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
152 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
153 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
154 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
155 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
156 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
157 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
158 2773857759 Microbacterium sp. 1294 Isolate Unclassified
159 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
160 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
161 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
162 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
163 2808606372 Agromyces sp. 23-23 Isolate Unclassified
164 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
165 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
166 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
167 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
168 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
169 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
170 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
171 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
172 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
173 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
174 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
175 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
176 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
177 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
178 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
179 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
180 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
181 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
182 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
183 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
184 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
185 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
186 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
187 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
188 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
189 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
190 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
191 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
192 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
193 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
194 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
195 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
196 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
197 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
198 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
199 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
200 2919069694 Microbacterium sp. 1154 Isolate Unclassified
201 2919395869 Microbacterium resistens 2980 Isolate Unclassified
202 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
203 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
204 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
205 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
206 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
207 2922554459 Rhodococcus sp. 66b Isolate Unclassified
208 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
209 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
210 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
211 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
212 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
213 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
214 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
215 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
216 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
217 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
218 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
219 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
220 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
221 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
222 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
223 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
224 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
225 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
226 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
227 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
228 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
229 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
230 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
231 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
232 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
233 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
234 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
235 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
236 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
237 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
238 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 64.55
Metatranscriptomes 1.21
Isolates 34.24

Biome Distribution

Category Percentage (%)
Aerial Root 0.91
Bulb 0
Endosphere 12.73
Nodule 0
Rhizoplane 4.85
Rhizosphere 46.67
Stem 0
Stem Tuber 0.3
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496108_0037553 3300048911 Bacteria 4035
2 JGI24740J21852_10014092 3300001979 Bacteria 2960
3 JGI25164J39214_1001102 3300002772 Bacteria 7765
4 JGI25152J39213_1000068 3300002773 Bacteria 68180
5 JGI25165J46597_1000014 3300003214 Bacteria 390383
6 Ga0006562J51391_1009840 3300003578 Bacteria 9470
7 Ga0006562J51391_1009841 3300003578 Bacteria 9692
8 Ga0055527_1000003 3300003760 Bacteria 705001
9 Ga0055542_1000005 3300003762 Bacteria 550280
10 Ga0055529_1000006 3300003763 Bacteria 416978
11 Ga0070683_100212547 3300005329 Bacteria 1837
12 Ga0070682_100117585 3300005337 Bacteria 1780
13 Ga0070675_100197793 3300005354 Bacteria 1744
14 Ga0070659_100211306 3300005366 Bacteria 1599
15 Ga0070665_100224084 3300005548 Bacteria 1881
16 Ga0081455_10000360 3300005937 Bacteria 59979
17 Ga0075365_10001568 3300006038 Bacteria 10485
18 Ga0075365_10018975 3300006038 Bacteria 4236
19 Ga0075363_100019134 3300006048 Bacteria 3420
20 Ga0075363_100035153 3300006048 Bacteria 2620
21 Ga0075364_10042816 3300006051 Bacteria 2942
22 Ga0075367_10000192 3300006178 Bacteria 20136
23 Ga0075367_10015738 3300006178 Bacteria 4117
24 Ga0075369_10022090 3300006186 Bacteria 2622
25 Ga0075370_10080014 3300006353 Bacteria 1877
26 Ga0105244_10029091 3300009036 Bacteria 2958
27 Ga0105244_10029293 3300009036 Bacteria 2944
28 Ga0105244_10038164 3300009036 Bacteria 2506
29 Ga0105244_10046242 3300009036 Bacteria 2236
30 Ga0111539_10133037 3300009094 Bacteria 2912
31 Ga0105243_10001157 3300009148 Bacteria 23917
32 Ga0105243_10006996 3300009148 Bacteria 8685
33 Ga0105242_10113275 3300009176 Bacteria 2316
34 Ga0105246_10002951 3300011119 Bacteria 10304
35 Ga0105246_10004702 3300011119 Bacteria 8312
36 Ga0157373_10002121 3300013100 Bacteria 15014
37 Ga0157370_10001204 3300013104 Bacteria 32311
38 Ga0157369_10008101 3300013105 Bacteria 12045
39 Ga0157369_10011283 3300013105 Bacteria 10152
40 Ga0157369_10031527 3300013105 Bacteria 5835
41 Ga0157369_10123347 3300013105 Bacteria 2748
42 Ga0171462_1004 3300013250 Bacteria 678877
43 Ga0157378_10036226 3300013297 Bacteria 4367
44 Ga0163162_10027817 3300013306 Bacteria 5593
45 Ga0157372_10033532 3300013307 Bacteria 5641
46 Ga0157375_10212382 3300013308 Bacteria 2093
47 Ga0206356_11321965 3300020070 Bacteria 2009
48 Ga0206353_11302654 3300020082 Bacteria 7497
49 Ga0209672_100003 3300025228 Bacteria 1560476
50 Ga0209147_101396 3300025229 Bacteria 8897
51 Ga0207427_100121 3300025231 Bacteria 99954
52 Ga0209437_100398 3300025233 Bacteria 40556
53 Ga0207425_1002612 3300025245 Bacteria 6234
54 Ga0209646_1000013 3300025246 Bacteria 565830
55 Ga0209646_1000014 3300025246 Bacteria 550484
56 Ga0209677_101046 3300025253 Bacteria 13181
57 Ga0209148_1000004 3300025254 Bacteria 1844481
58 Ga0209148_1002426 3300025254 Bacteria 6430
59 Ga0209129_1000052 3300025258 Bacteria 265251
60 Ga0209233_1000014 3300025261 Bacteria 996641
61 Ga0209455_1000091 3300025272 Bacteria 223115
62 Ga0209455_1003427 3300025272 Bacteria 5616
63 Ga0209025_1000895 3300025294 Bacteria 46371
64 Ga0209051_1005653 3300025303 Bacteria 7236
65 Ga0209051_1021017 3300025303 Bacteria 2792
66 Ga0207697_10000117 3300025315 Bacteria 37548
67 Ga0207655_1004585 3300025728 Bacteria 9731
68 Ga0207655_1014458 3300025728 Bacteria 4458
69 Ga0207647_10073725 3300025904 Bacteria 2057
70 Ga0207659_10197866 3300025926 Bacteria 1603
71 Ga0207709_10003866 3300025935 Bacteria 8771
72 Ga0207709_10012820 3300025935 Bacteria 4622
73 Ga0207683_10131789 3300026121 Bacteria 2249
74 Ga0207428_10136659 3300027907 Bacteria 1874
75 Ga0307408_100089578 3300031548 Bacteria 2319
76 Ga0307405_10072569 3300031731 Bacteria 2219
77 Ga0307405_10147960 3300031731 Bacteria 1648
78 Ga0307413_10043057 3300031824 Bacteria 2658
79 Ga0307406_10000522 3300031901 Bacteria 22100
80 Ga0307406_10000933 3300031901 Bacteria 16331
81 Ga0307406_10001078 3300031901 Bacteria 15182
82 Ga0307412_10041489 3300031911 Bacteria 2983
83 Ga0307416_100017272 3300032002 Bacteria 5042
84 Ga0307416_100068910 3300032002 Bacteria 2925
85 Ga0307414_10034980 3300032004 Bacteria 3338
86 Ga0307414_10092511 3300032004 Bacteria 2251
87 Ga0395899_0002010 3300037312 Bacteria 16749
88 Ga0395899_0004055 3300037312 Bacteria 11548
89 Ga0395900_0014136 3300037418 Bacteria 8150
90 Ga0395900_0020268 3300037418 Bacteria 6786
91 Ga0395900_0159767 3300037418 Bacteria 2299
92 Ga0395900_0278275 3300037418 Bacteria 1666
93 Ga0395898_0000194 3300037466 Bacteria 155846
94 Ga0395898_0003867 3300037466 Bacteria 16547
95 Ga0395898_0012452 3300037466 Bacteria 8794
96 Ga0395898_0056648 3300037466 Bacteria 3820
97 Ga0395898_0157490 3300037466 Bacteria 2172
98 Ga0395905_0013128 3300037471 Bacteria 7952
99 Ga0395901_0030826 3300038443 Bacteria 5526
100 Ga0439465_0017829 3300041413 Bacteria 2219
101 Ga0451843_1550255 3300041509 Bacteria 1471
102 Ga0439442_000136 3300042002 Bacteria 18286
103 Ga0466965_0006565 3300044683 Bacteria 5296
104 Ga0466965_0022463 3300044683 Bacteria 3041
105 Ga0466965_0024130 3300044683 Bacteria 2940
106 Ga0466961_0032704 3300044693 Bacteria 3343
107 Ga0466961_0043656 3300044693 Bacteria 2870
108 Ga0466961_0051195 3300044693 Bacteria 2638
109 Ga0466968_0015226 3300044735 Bacteria 3045
110 Ga0466970_0000001 3300044765 Bacteria 252791
111 Ga0466970_0004332 3300044765 Bacteria 6985
112 Ga0466970_0011354 3300044765 Bacteria 4541
113 Ga0466970_0104855 3300044765 Bacteria 1541
114 Ga0466957_0020099 3300044842 Bacteria 3930
115 Ga0466957_0032433 3300044842 Bacteria 3128
116 Ga0466960_0051106 3300044901 Bacteria 1995
117 Ga0466958_0086208 3300045836 Bacteria 1938
118 Ga0466958_0179200 3300045836 Bacteria 1344
119 Ga0495627_001206 3300046453 Bacteria 16251
120 Ga0495580_0004763 3300046472 Bacteria 11354
121 Ga0495665_0048639 3300046531 Bacteria 2248
122 Ga0495586_0125277 3300046535 Bacteria 1437
123 Ga0495645_0076450 3300046543 Bacteria 2409
124 Ga0495668_0001186 3300046616 Bacteria 26476
125 Ga0496102_0050385 3300048905 Bacteria 3791
126 Ga0496103_0046674 3300048906 Bacteria 2675
127 Ga0496104_0192085 3300048907 Bacteria 1953
128 Ga0496105_0083198 3300048908 Bacteria 2643
129 Ga0496105_0103555 3300048908 Bacteria 2350
130 Ga0496105_0260444 3300048908 Bacteria 1402
131 Ga0496107_0152437 3300048910 Bacteria 1710
132 Ga0496108_0031943 3300048911 Bacteria 4370
133 Ga0496110_0019180 3300048913 Bacteria 5751
134 Ga0496111_0075364 3300048914 Bacteria 2458
135 Ga0496113_0089416 3300048916 Bacteria 2370
136 Ga0496114_0052312 3300048917 Bacteria 3402
137 Ga0496114_0166975 3300048917 Bacteria 1916
138 Ga0496115_0018059 3300048918 Bacteria 5405
139 Ga0496115_0109101 3300048918 Bacteria 2272
140 Ga0496117_0000061 3300048920 Bacteria 258454
141 Ga0496117_0000184 3300048920 Bacteria 127675
142 Ga0496117_0002824 3300048920 Bacteria 21131
143 Ga0496117_0017476 3300048920 Bacteria 5988
144 Ga0496117_0030001 3300048920 Bacteria 4180
145 Ga0496117_0083344 3300048920 Bacteria 2091
146 Ga0496117_0110052 3300048920 Bacteria 1718
147 Ga0496118_0000142 3300048921 Bacteria 126087
148 Ga0496118_0003395 3300048921 Bacteria 20127
149 Ga0496118_0005935 3300048921 Bacteria 13646
150 Ga0496118_0013729 3300048921 Bacteria 7640
151 Ga0496118_0057457 3300048921 Bacteria 2916
152 Ga0496119_0002150 3300048922 Bacteria 22146
153 Ga0496119_0003029 3300048922 Bacteria 17787
154 Ga0496119_0003426 3300048922 Bacteria 16471
155 Ga0496119_0005999 3300048922 Bacteria 11415
156 Ga0496119_0009414 3300048922 Bacteria 8389
157 Ga0496119_0021373 3300048922 Bacteria 4680
158 Ga0496120_0001757 3300048923 Bacteria 24522
159 Ga0496120_0004595 3300048923 Bacteria 11489
160 Ga0496120_0006232 3300048923 Bacteria 9216
161 Ga0496120_0049915 3300048923 Bacteria 2398
162 Ga0496122_0000022 3300048925 Bacteria 388704
163 Ga0496122_0000095 3300048925 Bacteria 200509
164 Ga0496122_0009346 3300048925 Bacteria 10351
165 Ga0496122_0011583 3300048925 Bacteria 8903
166 Ga0496122_0057630 3300048925 Bacteria 2883
167 Ga0496122_0081716 3300048925 Bacteria 2248
168 Ga0496123_0000016 3300048926 Bacteria 424330
169 Ga0496123_0000100 3300048926 Bacteria 170019
170 Ga0496123_0010532 3300048926 Bacteria 8153
171 Ga0496123_0021155 3300048926 Bacteria 5064
172 Ga0496124_0000090 3300048927 Bacteria 192095
173 Ga0496124_0003991 3300048927 Bacteria 17585
174 Ga0496124_0004974 3300048927 Bacteria 15207
175 Ga0496124_0090681 3300048927 Bacteria 2492
176 Ga0496125_0000360 3300048928 Bacteria 86040
177 Ga0496125_0004443 3300048928 Bacteria 16177
178 Ga0496125_0007394 3300048928 Bacteria 11686
179 Ga0496125_0013821 3300048928 Bacteria 7906
180 Ga0496125_0031106 3300048928 Bacteria 4763
181 Ga0496126_0016103 3300048929 Bacteria 7492
182 Ga0496126_0017091 3300048929 Bacteria 7234
183 Ga0496126_0074445 3300048929 Bacteria 3016
184 Ga0501032_0001224 3300049569 Bacteria 20569
185 Ga0501034_0000279 3300049571 Bacteria 91909
186 Ga0501034_0001483 3300049571 Bacteria 30959
187 Ga0501034_0007155 3300049571 Bacteria 11908
188 Ga0501036_0002561 3300049572 Bacteria 14300
189 Ga0501037_0000233 3300049573 Bacteria 47908
190 Ga0501037_0021855 3300049573 Bacteria 4735
191 Ga0501037_0046970 3300049573 Bacteria 3165
192 Ga0501037_0118795 3300049573 Bacteria 1902
193 Ga0501038_0006355 3300049574 Bacteria 10937
194 Ga0501038_0011896 3300049574 Bacteria 7942
195 Ga0501038_0109328 3300049574 Bacteria 2291
196 Ga0501039_0189914 3300049575 Bacteria 1615
197 Ga0501042_0014003 3300049578 Bacteria 5467
198 Ga0501043_0006542 3300049579 Bacteria 9350
199 Ga0501043_0184927 3300049579 Bacteria 1623
200 Ga0501046_0042967 3300049580 Bacteria 3601
201 Ga0501047_0004573 3300049581 Bacteria 13013
202 Ga0501070_0000076 3300049586 Bacteria 83972
203 Ga0501070_0279977 3300049586 Bacteria 1361
204 Ga0501035_0006942 3300049822 Bacteria 10578
205 Ga0501044_0085886 3300049823 Bacteria 3179
206 nmdc:mga03n38_98243_c1 3300050490 Bacteria 1408
207 nmdc:mga00v17_18195_c2 3300050491 Bacteria 2964
208 nmdc:mga00v17_7898_c2 3300050491 Bacteria 4696
209 nmdc:mga06z11_857_c1 3300050494 Bacteria 11081
210 nmdc:mga07m45_14071_c2 3300050496 Bacteria 3756
211 nmdc:mga07m45_42175_c1 3300050496 Bacteria 2557
212 Ga0500635_0000183 3300053080 Bacteria 32119
213 Ga0500650_0028183 3300053098 Bacteria 2533
214 Ga0500573_0028933 3300053140 Bacteria 3192
215 Ga0500577_0000641 3300053142 Bacteria 8972
216 Ga0500577_0000943 3300053142 Bacteria 7539
217 Ga0500616_0000058 3300053153 Bacteria 266276
218 2566992154 2565956761 Bacteria 6601618
219 2587864875 2585428094 Bacteria 3604039
220 2588109104 2585428157 Bacteria 3018951
221 2643732523 2643221542 Bacteria 3563959
222 2643766663 2643221549 Bacteria 4042819
223 2643786397 2643221553 Bacteria 3544260
224 2643846501 2643221566 Bacteria 3460379
225 2643877498 2643221572 Bacteria 3614809
226 2643886514 2643221575 Bacteria 4022601
227 2643996621 2643221597 Bacteria 3347721
228 2644089881 2643221615 Bacteria 5487866
229 2644094545 2643221616 Bacteria 4066575
230 2644102112 2643221617 Bacteria 5139111
231 2644113415 2643221619 Bacteria 4158469
232 2644115335 2643221620 Bacteria 5134593
233 2644171330 2643221630 Bacteria 3601215
234 2644279855 2643221649 Bacteria 3867359
235 2644319726 2643221657 Bacteria 5490246
236 2644384553 2643221669 Bacteria 3611286
237 2644681094 2643221724 Bacteria 3593515
238 2691512048 2690315906 Bacteria 4517044
239 2723640584 2721755702 Bacteria 4373124
240 2729909356 2728369276 Bacteria 5610032
241 2730230473 2728369380 Bacteria 3620317
242 2738870295 2738541305 Bacteria 4910150
243 2738888342 2738541308 Bacteria 7020677
244 2739203665 2738543005 Bacteria 5278128
245 2739327693 2738543027 Bacteria 6409078
246 2747953714 2747842429 Bacteria 3914386
247 2753300181 2751185788 Bacteria 4541048
248 2758227029 2757320536 Bacteria 3629334
249 2774381068 2773857758 Bacteria 3592392
250 2774383123 2773857759 Bacteria 2963774
251 2774391938 2773857762 Bacteria 5971770
252 2774398428 2773857763 Bacteria 4180068
253 2808630241 2808606306 Bacteria 3608896
254 2808883609 2808606368 Bacteria 3174172
255 2808903794 2808606372 Bacteria 4649509
256 2809197277 2808606439 Bacteria 5952208
257 2809228268 2808606447 Bacteria 3572005
258 2812324289 2811994872 Bacteria 4121241
259 2812330648 2811994874 Bacteria 5367947
260 2812352154 2811994878 Bacteria 5992952
261 2821270956 2821268502 Bacteria 3750023
262 2833711951 2833709550 Bacteria 4008291
263 2844850912 2844849076 Bacteria 4091819
264 2844853492 2844852863 Bacteria 3849151
265 2852634933 2852632344 Bacteria 3463163
266 2852647546 2852646457 Bacteria 3408613
267 2852664147 2852663356 Bacteria 4090475
268 2857483758 2857481737 Bacteria 4761446
269 2857722449 2857720070 Bacteria 3189373
270 2857725772 2857723135 Bacteria 4217853
271 2857733030 2857729791 Bacteria 4040535
272 2857743541 2857740372 Bacteria 4782044
273 2870624337 2870622029 Bacteria 3643329
274 2884764021 2884763398 Bacteria 4091164
275 2891970153 2891968417 Bacteria 5821697
276 2895662333 2895660088 Bacteria 3782833
277 2897561883 2897561785 Bacteria 3256946
278 2902796329 2902792274 Bacteria 7270173
279 2904498678 2904497146 Bacteria 4731781
280 2904511048 2904509784 Bacteria 3520416
281 2904538024 2904535858 Bacteria 6308016
282 2904766914 2904765812 Bacteria 5369154
283 2904775074 2904770941 Bacteria 5580202
284 2904779493 2904776348 Bacteria 4658726
285 2906801935 2906799679 Bacteria 4031749
286 2908680202 2908678064 Bacteria 3482747
287 2908814599 2908811453 Bacteria 5478616
288 2910811308 2910809715 Bacteria 4982797
289 2919036991 2919034639 Bacteria 4763403
290 2919044414 2919042368 Bacteria 3905917
291 2919062696 2919059106 Bacteria 4991624
292 2919072403 2919069694 Bacteria 3622919
293 2919398592 2919395869 Bacteria 3704152
294 2919420651 2919420072 Bacteria 5390363
295 2919433591 2919432681 Bacteria 5390474
296 2919444175 2919443155 Bacteria 4072969
297 2919526942 2919523602 Bacteria 3788128
298 2919541764 2919538618 Bacteria 4677069
299 2922557207 2922554459 Bacteria 6683962
300 2928092671 2928090899 Bacteria 3158267
301 2928105736 2928104781 Bacteria 3877447
302 2928121731 2928121344 Bacteria 3972376
303 2932429468 2932426870 Bacteria 4547726
304 2933420555 2933418574 Bacteria 4476724
305 2935410079 2935409751 Bacteria 4179611
306 2939649598 2939647034 Bacteria 4681660
307 2939660520 2939657138 Bacteria 3740283
308 2939664088 2939660829 Bacteria 3784848
309 2939678029 2939674588 Bacteria 4844420
310 2945968694 2945968032 Bacteria 4111363
311 2946045147 2946041624 Bacteria 4191385
312 2946084088 2946080515 Bacteria 4310960
313 2974296361 2974294766 Bacteria 3767688
314 2974316497 2974315732 Bacteria 4602776
315 2974327404 2974324384 Bacteria 3750535
316 2977229026 2977228692 Bacteria 3450105
317 2977237811 2977236895 Bacteria 3569373
318 2977253299 2977251589 Bacteria 2952848
319 2977267689 2977264416 Bacteria 3750737
320 2984544405 2984542743 Bacteria 3569378
321 2984552242 2984551494 Bacteria 3877562
322 2984583792 2984580707 Bacteria 3351387
323 8004025396 8004021418 Bacteria 4313954
324 8004027495 8004025490 Bacteria 4327753
325 8004184573 8004182704 Bacteria 3391155
326 8004214922 8004212874 Bacteria 2861420
327 8016256592 8016254467 Bacteria 3797036
328 8045834135 8045830549 Bacteria 4444727
329 8054110464 8054107350 Bacteria 5022511
330 8056038794 8056037122 Bacteria 3854319
331 Ga0496108_0037553
332 JGI24740J21852_10014092
333 JGI25164J39214_1001102
334 JGI25152J39213_1000068
335 JGI25165J46597_1000014
336 Ga0006562J51391_1009840
337 Ga0006562J51391_1009841
338 Ga0055527_1000003
339 Ga0055542_1000005
340 Ga0055529_1000006
341 Ga0070683_100212547
342 Ga0070682_100117585
343 Ga0070675_100197793
344 Ga0070659_100211306
345 Ga0070665_100224084
346 Ga0081455_10000360
347 Ga0075365_10001568
348 Ga0075365_10018975
349 Ga0075363_100019134
350 Ga0075363_100035153
351 Ga0075364_10042816
352 Ga0075367_10000192
353 Ga0075367_10015738
354 Ga0075369_10022090
355 Ga0075370_10080014
356 Ga0105244_10029091
357 Ga0105244_10029293
358 Ga0105244_10038164
359 Ga0105244_10046242
360 Ga0111539_10133037
361 Ga0105243_10001157
362 Ga0105243_10006996
363 Ga0105242_10113275
364 Ga0105246_10002951
365 Ga0105246_10004702
366 Ga0157373_10002121
367 Ga0157370_10001204
368 Ga0157369_10008101
369 Ga0157369_10011283
370 Ga0157369_10031527
371 Ga0157369_10123347
372 Ga0171462_1004
373 Ga0157378_10036226
374 Ga0163162_10027817
375 Ga0157372_10033532
376 Ga0157375_10212382
377 Ga0206356_11321965
378 Ga0206353_11302654
379 Ga0209672_100003
380 Ga0209147_101396
381 Ga0207427_100121
382 Ga0209437_100398
383 Ga0207425_1002612
384 Ga0209646_1000013
385 Ga0209646_1000014
386 Ga0209677_101046
387 Ga0209148_1000004
388 Ga0209148_1002426
389 Ga0209129_1000052
390 Ga0209233_1000014
391 Ga0209455_1000091
392 Ga0209455_1003427
393 Ga0209025_1000895
394 Ga0209051_1005653
395 Ga0209051_1021017
396 Ga0207697_10000117
397 Ga0207655_1004585
398 Ga0207655_1014458
399 Ga0207647_10073725
400 Ga0207659_10197866
401 Ga0207709_10003866
402 Ga0207709_10012820
403 Ga0207683_10131789
404 Ga0207428_10136659
405 Ga0307408_100089578
406 Ga0307405_10072569
407 Ga0307405_10147960
408 Ga0307413_10043057
409 Ga0307406_10000522
410 Ga0307406_10000933
411 Ga0307406_10001078
412 Ga0307412_10041489
413 Ga0307416_100017272
414 Ga0307416_100068910
415 Ga0307414_10034980
416 Ga0307414_10092511
417 Ga0395899_0002010
418 Ga0395899_0004055
419 Ga0395900_0014136
420 Ga0395900_0020268
421 Ga0395900_0159767
422 Ga0395900_0278275
423 Ga0395898_0000194
424 Ga0395898_0003867
425 Ga0395898_0012452
426 Ga0395898_0056648
427 Ga0395898_0157490
428 Ga0395905_0013128
429 Ga0395901_0030826
430 Ga0439465_0017829
431 Ga0451843_1550255
432 Ga0439442_000136
433 Ga0466965_0006565
434 Ga0466965_0022463
435 Ga0466965_0024130
436 Ga0466961_0032704
437 Ga0466961_0043656
438 Ga0466961_0051195
439 Ga0466968_0015226
440 Ga0466970_0000001
441 Ga0466970_0004332
442 Ga0466970_0011354
443 Ga0466970_0104855
444 Ga0466957_0020099
445 Ga0466957_0032433
446 Ga0466960_0051106
447 Ga0466958_0086208
448 Ga0466958_0179200
449 Ga0495627_001206
450 Ga0495580_0004763
451 Ga0495665_0048639
452 Ga0495586_0125277
453 Ga0495645_0076450
454 Ga0495668_0001186
455 Ga0496102_0050385
456 Ga0496103_0046674
457 Ga0496104_0192085
458 Ga0496105_0083198
459 Ga0496105_0103555
460 Ga0496105_0260444
461 Ga0496107_0152437
462 Ga0496108_0031943
463 Ga0496110_0019180
464 Ga0496111_0075364
465 Ga0496113_0089416
466 Ga0496114_0052312
467 Ga0496114_0166975
468 Ga0496115_0018059
469 Ga0496115_0109101
470 Ga0496117_0000061
471 Ga0496117_0000184
472 Ga0496117_0002824
473 Ga0496117_0017476
474 Ga0496117_0030001
475 Ga0496117_0083344
476 Ga0496117_0110052
477 Ga0496118_0000142
478 Ga0496118_0003395
479 Ga0496118_0005935
480 Ga0496118_0013729
481 Ga0496118_0057457
482 Ga0496119_0002150
483 Ga0496119_0003029
484 Ga0496119_0003426
485 Ga0496119_0005999
486 Ga0496119_0009414
487 Ga0496119_0021373
488 Ga0496120_0001757
489 Ga0496120_0004595
490 Ga0496120_0006232
491 Ga0496120_0049915
492 Ga0496122_0000022
493 Ga0496122_0000095
494 Ga0496122_0009346
495 Ga0496122_0011583
496 Ga0496122_0057630
497 Ga0496122_0081716
498 Ga0496123_0000016
499 Ga0496123_0000100
500 Ga0496123_0010532
501 Ga0496123_0021155
502 Ga0496124_0000090
503 Ga0496124_0003991
504 Ga0496124_0004974
505 Ga0496124_0090681
506 Ga0496125_0000360
507 Ga0496125_0004443
508 Ga0496125_0007394
509 Ga0496125_0013821
510 Ga0496125_0031106
511 Ga0496126_0016103
512 Ga0496126_0017091
513 Ga0496126_0074445
514 Ga0501032_0001224
515 Ga0501034_0000279
516 Ga0501034_0001483
517 Ga0501034_0007155
518 Ga0501036_0002561
519 Ga0501037_0000233
520 Ga0501037_0021855
521 Ga0501037_0046970
522 Ga0501037_0118795
523 Ga0501038_0006355
524 Ga0501038_0011896
525 Ga0501038_0109328
526 Ga0501039_0189914
527 Ga0501042_0014003
528 Ga0501043_0006542
529 Ga0501043_0184927
530 Ga0501046_0042967
531 Ga0501047_0004573
532 Ga0501070_0000076
533 Ga0501070_0279977
534 Ga0501035_0006942
535 Ga0501044_0085886
536 nmdc:mga03n38_98243_c1
537 nmdc:mga00v17_18195_c2
538 nmdc:mga00v17_7898_c2
539 nmdc:mga06z11_857_c1
540 nmdc:mga07m45_14071_c2
541 nmdc:mga07m45_42175_c1
542 Ga0500635_0000183
543 Ga0500650_0028183
544 Ga0500573_0028933
545 Ga0500577_0000641
546 Ga0500577_0000943
547 Ga0500616_0000058
548 2566992154
549 2587864875
550 2588109104
551 2643732523
552 2643766663
553 2643786397
554 2643846501
555 2643877498
556 2643886514
557 2643996621
558 2644089881
559 2644094545
560 2644102112
561 2644113415
562 2644115335
563 2644171330
564 2644279855
565 2644319726
566 2644384553
567 2644681094
568 2691512048
569 2723640584
570 2729909356
571 2730230473
572 2738870295
573 2738888342
574 2739203665
575 2739327693
576 2747953714
577 2753300181
578 2758227029
579 2774381068
580 2774383123
581 2774391938
582 2774398428
583 2808630241
584 2808883609
585 2808903794
586 2809197277
587 2809228268
588 2812324289
589 2812330648
590 2812352154
591 2821270956
592 2833711951
593 2844850912
594 2844853492
595 2852634933
596 2852647546
597 2852664147
598 2857483758
599 2857722449
600 2857725772
601 2857733030
602 2857743541
603 2870624337
604 2884764021
605 2891970153
606 2895662333
607 2897561883
608 2902796329
609 2904498678
610 2904511048
611 2904538024
612 2904766914
613 2904775074
614 2904779493
615 2906801935
616 2908680202
617 2908814599
618 2910811308
619 2919036991
620 2919044414
621 2919062696
622 2919072403
623 2919398592
624 2919420651
625 2919433591
626 2919444175
627 2919526942
628 2919541764
629 2922557207
630 2928092671
631 2928105736
632 2928121731
633 2932429468
634 2933420555
635 2935410079
636 2939649598
637 2939660520
638 2939664088
639 2939678029
640 2945968694
641 2946045147
642 2946084088
643 2974296361
644 2974316497
645 2974327404
646 2977229026
647 2977237811
648 2977253299
649 2977267689
650 2984544405
651 2984552242
652 2984583792
653 8004025396
654 8004027495
655 8004184573
656 8004214922
657 8016256592
658 8045834135
659 8054110464
660 8056038794

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

50

115

0.95

PF01494

FAD_binding_3

FAD binding domain

45

95

0.94

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

55

488

0.93

PF01946

Thi4

Thi4 family

32

122

0.92

PF00890

FAD_binding_2

FAD binding domain

47

116

0.88

PF01266

DAO

FAD dependent oxidoreductase

47

139

0.86

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

33

135

0.84

PF12831

FAD_oxidored

FAD dependent oxidoreductase

47

166

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
2yg7-assembly2.cif.gz_B structure-based redesign of cofactor binding in putrescine oxidase: a394c-a396t-q431g triple mutant 0.9945 3 448
2yg5-assembly1.cif.gz_A-2 structure-based redesign of cofactor binding in putrescine oxidase: a394c mutant 0.9945 3 448
2yg4-assembly1.cif.gz_A structure-based redesign of cofactor binding in putrescine oxidase: wild type bound to putrescine 0.9942 3 448
3rha-assembly1.cif.gz_A the crystal structure of oxidoreductase from arthrobacter aurescens 0.9938 1 451
2yg6-assembly1.cif.gz_A structure-based redesign of cofactor binding in putrescine oxidase: p15i-a394c double mutant 0.9902 3 448
ID Description Score Start End Superfamily
3rhaA00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9938 1 451 3.50.50.60
2yg3A03 Mainly Alpha;Orthogonal Bundle;Guanine Nucleotide Dissociation Inhibitor; domain 1;Guanine Nucleotide Dissociation Inhibitor, domain 1 0.9844 110 199 1.10.405.10
3rhaA00 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9744 1 451 3.50.50.60
2yg4A01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9679 3 448 3.50.50.60
af_P9WQ15_12_449_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.964 5 444 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A3C1KBL4-F1-model_v4 Putrescine oxidase 0.995 58 426 GO:0016491
AF-A0A069JGC6-F1-model_v4 deleted 0.9945 1 451
AF-A0A417YZ59-F1-model_v4 FAD-dependent oxidoreductase 0.9928 77 448 GO:0016491
AF-A0A3C1KBL4-F1-model_v4 Putrescine oxidase 0.9923 58 426 GO:0016491
AF-A0A2P4R9U8-F1-model_v4 Putrescine oxidase 0.9918 118 216

Map