F409461

General Info

Members Datasets Scaffolds Average Seq Length
328 181 656 195

Family's Representative Sequence

Representative Sequence 3300061719|Ga0466962_0042294|Ga0466962_0042294_120_776
Length 218
Sequence MVVGGRGANAMRRPAQKTDMRVGARLSEMTDLASPRRGKRERLIYGALQVLHAQGVESTTLADIAAAADVPVGNVYYYFKTKDELVEAVIAAHAKEIDSRLASLEQHRTPKARLKAFVRMLTEERELAVRSGCPQGSLCSELDKRDDELSRSCSQLISVPIEWAERQLRAMGRRDARELAVALIASYQGIALLTNTFRDPELMAREGRRLERWVDSLA

Samples

Sample ID Description Type Environment
1 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
18 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
19 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
20 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
21 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
24 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
25 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
26 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
27 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
36 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
40 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
41 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
42 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
43 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
44 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
62 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
63 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
70 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
71 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
72 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
73 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
74 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
75 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
76 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
79 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
80 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
81 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
82 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
83 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
84 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
85 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
86 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
87 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
91 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
92 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
93 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
96 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
100 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
101 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
102 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
105 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
106 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
107 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
108 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
109 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
110 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
111 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
112 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
113 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
114 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
115 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
119 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
120 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
121 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
122 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
123 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
126 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
127 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
131 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
132 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
133 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
134 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
135 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
136 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
137 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
138 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
139 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
140 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
141 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
142 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
146 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
147 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
148 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
149 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
150 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
151 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
152 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
153 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
154 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
155 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
156 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
157 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
158 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
167 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
168 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
169 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
170 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
171 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
172 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
173 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
174 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
175 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
176 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
177 2643221692 Nocardia sp. Root136 Isolate Unclassified
178 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
179 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
180 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
181 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.56
Metatranscriptomes 0
Isolates 2.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.83
Nodule 0
Rhizoplane 5.49
Rhizosphere 82.62
Stem 0
Stem Tuber 0
Unclassified 0.91

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466962_0042294 3300061719 Bacteria 2181
2 Ga0070683_100248177 3300005329 Bacteria 1693
3 Ga0070680_100023564 3300005336 Bacteria 4910
4 Ga0070660_100003413 3300005339 Bacteria 10926
5 Ga0070714_100001827 3300005435 Bacteria 15476
6 Ga0070714_100007597 3300005435 Bacteria 8441
7 Ga0070714_100025916 3300005435 Bacteria 4842
8 Ga0070714_100037244 3300005435 Bacteria 4086
9 Ga0070714_100089550 3300005435 Bacteria 2694
10 Ga0070714_100150876 3300005435 Bacteria 2094
11 Ga0070714_100155118 3300005435 Bacteria 2066
12 Ga0070713_100059637 3300005436 Bacteria 3187
13 Ga0070713_100073329 3300005436 Bacteria 2897
14 Ga0070713_100161627 3300005436 Bacteria 2000
15 Ga0070713_100164055 3300005436 Bacteria 1985
16 Ga0070713_100227140 3300005436 Bacteria 1695
17 Ga0070713_100660030 3300005436 Bacteria 996
18 Ga0070713_100843713 3300005436 Bacteria 879
19 Ga0070710_10223289 3300005437 Bacteria 1199
20 Ga0070711_101061675 3300005439 Bacteria 697
21 Ga0070708_100403185 3300005445 Bacteria 1289
22 Ga0070708_100510667 3300005445 Bacteria 1134
23 Ga0070708_100555408 3300005445 Bacteria 1083
24 Ga0070681_10004315 3300005458 Bacteria 13511
25 Ga0070681_10007241 3300005458 Bacteria 10826
26 Ga0070707_100058691 3300005468 Bacteria 3690
27 Ga0070707_100118369 3300005468 Bacteria 2571
28 Ga0070698_100044102 3300005471 Bacteria 4568
29 Ga0070699_100018742 3300005518 Bacteria 5943
30 Ga0070699_100165833 3300005518 Bacteria 1956
31 Ga0070679_100009018 3300005530 Bacteria 9410
32 Ga0070679_100056171 3300005530 Bacteria 3923
33 Ga0070684_100038644 3300005535 Bacteria 4101
34 Ga0070684_100375232 3300005535 Bacteria 1309
35 Ga0070684_100819061 3300005535 Bacteria 871
36 Ga0070697_100243233 3300005536 Bacteria 1537
37 Ga0070695_100472316 3300005545 Bacteria 965
38 Ga0070693_100109510 3300005547 Bacteria 1697
39 Ga0070665_100468453 3300005548 Bacteria 1270
40 Ga0068855_100011832 3300005563 Bacteria 10548
41 Ga0068855_100125986 3300005563 Bacteria 2928
42 Ga0068854_100066782 3300005578 Bacteria 2618
43 Ga0068856_100007079 3300005614 Bacteria 10952
44 Ga0068856_100367004 3300005614 Bacteria 1458
45 Ga0081455_10074984 3300005937 Bacteria 2792
46 Ga0070717_10006944 3300006028 Bacteria 8367
47 Ga0070717_10014781 3300006028 Bacteria 6006
48 Ga0070717_10087551 3300006028 Bacteria 2623
49 Ga0070717_10161344 3300006028 Bacteria 1945
50 Ga0070717_10164244 3300006028 Bacteria 1928
51 Ga0070717_10207781 3300006028 Bacteria 1717
52 Ga0070717_10239686 3300006028 Bacteria 1599
53 Ga0070717_10252919 3300006028 Bacteria 1557
54 Ga0070717_10261077 3300006028 Bacteria 1532
55 Ga0070717_10314055 3300006028 Bacteria 1395
56 Ga0075364_10138401 3300006051 Bacteria 1636
57 Ga0099794_10076092 3300007265 Unclassified 1650
58 Ga0111539_11130177 3300009094 Bacteria 910
59 Ga0105245_10124094 3300009098 Bacteria 2415
60 Ga0105243_10002008 3300009148 Bacteria 17292
61 Ga0105241_10469332 3300009174 Bacteria 1117
62 Ga0105237_10045891 3300009545 Bacteria 4397
63 Ga0105237_10320437 3300009545 Bacteria 1554
64 Ga0105237_11253769 3300009545 Bacteria 748
65 Ga0105238_10267881 3300009551 Bacteria 1688
66 Ga0105238_10680322 3300009551 Bacteria 1040
67 Ga0105239_10008392 3300010375 Bacteria 11765
68 Ga0105239_10512870 3300010375 Bacteria 1364
69 Ga0105246_10325234 3300011119 Bacteria 1251
70 Ga0157370_10287475 3300013104 Bacteria 1519
71 Ga0157370_10721154 3300013104 Bacteria 909
72 Ga0157369_10355353 3300013105 Bacteria 1522
73 Ga0157372_10058733 3300013307 Bacteria 4301
74 Ga0157372_10148320 3300013307 Bacteria 2705
75 Ga0157372_10495117 3300013307 Bacteria 1425
76 Ga0157379_11141928 3300014968 Bacteria 747
77 Ga0213873_10041484 3300021358 Bacteria 1187
78 Ga0213872_10104689 3300021361 Bacteria 1260
79 Ga0213874_10000284 3300021377 Bacteria 9913
80 Ga0213874_10028344 3300021377 Bacteria 1599
81 Ga0213874_10082393 3300021377 Bacteria 1044
82 Ga0213876_10013655 3300021384 Bacteria 4308
83 Ga0213876_10025383 3300021384 Bacteria 3127
84 Ga0213876_10052288 3300021384 Bacteria 2159
85 Ga0213875_10205518 3300021388 Bacteria 927
86 Ga0207692_10027468 3300025898 Bacteria 2682
87 Ga0207707_10008593 3300025912 Bacteria 8854
88 Ga0207671_10026814 3300025914 Bacteria 4311
89 Ga0207693_10009793 3300025915 Bacteria 7801
90 Ga0207693_10525952 3300025915 Bacteria 923
91 Ga0207660_10339563 3300025917 Bacteria 1202
92 Ga0207657_10025231 3300025919 Bacteria 5485
93 Ga0207652_10282965 3300025921 Bacteria 1496
94 Ga0207646_10305275 3300025922 Bacteria 1438
95 Ga0207646_10378476 3300025922 Bacteria 1279
96 Ga0207646_10547594 3300025922 Bacteria 1040
97 Ga0207687_10131863 3300025927 Bacteria 1885
98 Ga0207700_10054748 3300025928 Bacteria 2996
99 Ga0207700_10468053 3300025928 Unclassified 1113
100 Ga0207700_10803328 3300025928 Bacteria 841
101 Ga0207700_11010450 3300025928 Bacteria 744
102 Ga0207664_10001372 3300025929 Bacteria 16010
103 Ga0207664_10001744 3300025929 Bacteria 14332
104 Ga0207664_10007096 3300025929 Bacteria 7765
105 Ga0207664_10333910 3300025929 Bacteria 1339
106 Ga0207665_10124330 3300025939 Bacteria 1825
107 Ga0207661_10105386 3300025944 Bacteria 2376
108 Ga0207679_10498723 3300025945 Bacteria 1086
109 Ga0207640_10069765 3300025981 Bacteria 2361
110 Ga0207702_10090159 3300026078 Bacteria 2682
111 Ga0207702_10287877 3300026078 Bacteria 1556
112 Ga0209998_10046149 3300027717 Bacteria 999
113 Ga0265318_10024412 3300028577 Bacteria 2397
114 Ga0265323_10013768 3300028653 Bacteria 3217
115 Ga0265322_10002918 3300028654 Bacteria 5206
116 Ga0265336_10012238 3300028666 Bacteria 2890
117 Ga0265338_10001391 3300028800 Bacteria 39385
118 Ga0265324_10000629 3300029957 Bacteria 24070
119 Ga0265325_10180422 3300031241 Bacteria 983
120 Ga0265314_10029654 3300031711 Bacteria 4062
121 Ga0307406_10049948 3300031901 Bacteria 2649
122 Ga0307415_100016628 3300032126 Bacteria 4390
123 Ga0373934_0001260 3300035086 Bacteria 9226
124 Ga0373923_0020465 3300035111 Bacteria 2571
125 Ga0373936_0007053 3300035113 Bacteria 4228
126 Ga0373945_0010611 3300035116 Bacteria 3036
127 Ga0373953_0118688 3300035117 Bacteria 1122
128 Ga0373954_0069724 3300035118 Bacteria 1669
129 Ga0373956_0002803 3300035119 Bacteria 7046
130 Ga0373957_0004909 3300035120 Bacteria 4109
131 Ga0373943_0064248 3300035170 Bacteria 1842
132 Ga0373946_0028357 3300035171 Bacteria 2220
133 Ga0373955_0001248 3300035172 Bacteria 10805
134 Ga0373955_0052995 3300035172 Bacteria 2214
135 Ga0373924_0000725 3300035410 Bacteria 10257
136 Ga0373935_0008183 3300035692 Bacteria 6265
137 Ga0373933_0001938 3300035724 Bacteria 11941
138 Ga0373947_0182575 3300035725 Bacteria 1366
139 Ga0373937_0000837 3300036401 Bacteria 26356
140 Ga0373937_0054544 3300036401 Bacteria 3668
141 Ga0373925_0090717 3300037068 Bacteria 2336
142 Ga0395900_0003061 3300037418 Bacteria 18206
143 Ga0395900_0023268 3300037418 Bacteria 6341
144 Ga0395898_0000885 3300037466 Bacteria 48863
145 Ga0395898_0003394 3300037466 Bacteria 17841
146 Ga0436364_0412538 3300037853 Bacteria 1927
147 Ga0436364_0477885 3300037853 Bacteria 2256
148 Ga0436364_0491274 3300037853 Bacteria 7123
149 Ga0436364_0620143 3300037853 Bacteria 8842
150 Ga0436364_0757648 3300037853 Bacteria 1937
151 Ga0436365_0015580 3300039437 Bacteria 955
152 Ga0436365_0807774 3300039437 Bacteria 5101
153 Ga0436365_0866311 3300039437 Bacteria 916
154 Ga0436365_1042628 3300039437 Bacteria 12199
155 Ga0436365_1057104 3300039437 Bacteria 931
156 Ga0436365_1587548 3300039437 Bacteria 6936
157 Ga0436365_1601193 3300039437 Bacteria 10996
158 Ga0436365_1791345 3300039437 Bacteria 3589
159 Ga0436361_0490574 3300039447 Bacteria 1543
160 Ga0436363_0051939 3300039450 Bacteria 834
161 Ga0436363_0403192 3300039450 Bacteria 3041
162 Ga0436363_0546272 3300039450 Bacteria 6655
163 Ga0436363_0553593 3300039450 Bacteria 1613
164 Ga0436363_0837834 3300039450 Bacteria 1276
165 Ga0436363_1168229 3300039450 Bacteria 2245
166 Ga0436363_1337061 3300039450 Bacteria 1846
167 Ga0436363_1480012 3300039450 Bacteria 35093
168 Ga0436363_1704856 3300039450 Bacteria 3821
169 Ga0436362_0067724 3300039453 Bacteria 947
170 Ga0436362_0374736 3300039453 Bacteria 2125
171 Ga0466969_0023669 3300044656 Bacteria 3163
172 Ga0466966_0066209 3300044684 Bacteria 2271
173 Ga0466966_0196814 3300044684 Bacteria 1220
174 Ga0466961_0012574 3300044693 Bacteria 5418
175 Ga0466961_0046153 3300044693 Bacteria 2787
176 Ga0466961_0194836 3300044693 Bacteria 1255
177 Ga0466961_0299980 3300044693 Bacteria 981
178 Ga0466963_0002095 3300044694 Bacteria 11011
179 Ga0466963_0002927 3300044694 Bacteria 9649
180 Ga0466963_0016375 3300044694 Bacteria 4610
181 Ga0466963_0107801 3300044694 Bacteria 1910
182 Ga0466963_0118369 3300044694 Unclassified 1822
183 Ga0466963_0141400 3300044694 Bacteria 1667
184 Ga0466963_0182167 3300044694 Bacteria 1467
185 Ga0466964_0034809 3300044706 Bacteria 2011
186 Ga0466964_0173144 3300044706 Bacteria 1018
187 Ga0466964_0477954 3300044706 Bacteria 665
188 Ga0466971_0008903 3300044719 Bacteria 4387
189 Ga0466971_0017598 3300044719 Bacteria 3163
190 Ga0466968_0177212 3300044735 Bacteria 990
191 Ga0466970_0121262 3300044765 Bacteria 1432
192 Ga0466970_0163010 3300044765 Bacteria 1233
193 Ga0466957_0035530 3300044842 Bacteria 2990
194 Ga0466957_0073904 3300044842 Bacteria 2114
195 Ga0466959_0006725 3300045049 Bacteria 8003
196 Ga0466959_0009191 3300045049 Bacteria 7019
197 Ga0466959_0066511 3300045049 Bacteria 2615
198 Ga0466959_0116770 3300045049 Bacteria 1900
199 Ga0466959_0143992 3300045049 Bacteria 1682
200 Ga0466959_0152277 3300045049 Bacteria 1629
201 Ga0466959_0179042 3300045049 Bacteria 1484
202 Ga0466959_0402685 3300045049 Bacteria 930
203 Ga0466958_0008508 3300045836 Bacteria 5699
204 Ga0466958_0031424 3300045836 Bacteria 3155
205 Ga0466958_0045914 3300045836 Bacteria 2636
206 Ga0466958_0087153 3300045836 Bacteria 1927
207 Ga0466958_0161312 3300045836 Bacteria 1416
208 Ga0466958_0288559 3300045836 Bacteria 1052
209 Ga0466967_0026840 3300045976 Bacteria 4779
210 Ga0466967_0062423 3300045976 Bacteria 3307
211 Ga0466967_0091875 3300045976 Bacteria 2759
212 Ga0466967_0138225 3300045976 Bacteria 2267
213 Ga0466967_0164336 3300045976 Bacteria 2085
214 Ga0466967_0321457 3300045976 Bacteria 1492
215 Ga0466967_0500713 3300045976 Bacteria 1192
216 Ga0466967_1076584 3300045976 Bacteria 801
217 Ga0466967_1173636 3300045976 Bacteria 765
218 Ga0495592_0008308 3300046454 Bacteria 7788
219 Ga0495603_0257931 3300046455 Bacteria 1003
220 Ga0495629_0016384 3300046459 Bacteria 5320
221 Ga0495629_0017783 3300046459 Bacteria 5095
222 Ga0495641_0011594 3300046461 Bacteria 5006
223 Ga0495651_0007329 3300046462 Bacteria 8432
224 Ga0495651_0021123 3300046462 Bacteria 5056
225 Ga0495653_0022625 3300046463 Bacteria 5083
226 Ga0495653_0176976 3300046463 Bacteria 1467
227 Ga0495580_0149156 3300046472 Bacteria 1620
228 Ga0495582_0019250 3300046473 Bacteria 3733
229 Ga0495662_0008150 3300046476 Bacteria 5162
230 Ga0495594_0000586 3300046499 Bacteria 18751
231 Ga0495608_0004957 3300046511 Bacteria 9531
232 Ga0495608_0009540 3300046511 Bacteria 6778
233 Ga0495628_0037643 3300046516 Bacteria 3878
234 Ga0495628_0418496 3300046516 Bacteria 977
235 Ga0495630_0059426 3300046517 Bacteria 2868
236 Ga0495652_0209426 3300046529 Bacteria 1473
237 Ga0495652_0240428 3300046529 Bacteria 1347
238 Ga0495665_0009286 3300046531 Bacteria 5327
239 Ga0495640_0022895 3300046533 Bacteria 4563
240 Ga0495640_0201337 3300046533 Bacteria 1262
241 Ga0495640_0316108 3300046533 Bacteria 968
242 Ga0495586_0049998 3300046535 Bacteria 2261
243 Ga0495587_0005676 3300046536 Bacteria 8135
244 Ga0495645_0041510 3300046543 Bacteria 3354
245 Ga0495645_0156673 3300046543 Bacteria 1578
246 Ga0495622_0006332 3300046557 Bacteria 5495
247 Ga0495667_0005060 3300046559 Bacteria 8917
248 Ga0495667_0046541 3300046559 Bacteria 2868
249 Ga0495634_0012815 3300046642 Bacteria 6068
250 Ga0495634_0224411 3300046642 Bacteria 1158
251 Ga0495588_0026683 3300046674 Bacteria 2885
252 Ga0495657_0013876 3300046675 Bacteria 5927
253 Ga0495657_0019620 3300046675 Bacteria 4875
254 Ga0495623_0028839 3300046679 Bacteria 3571
255 Ga0495623_0169807 3300046679 Bacteria 1275
256 Ga0495647_0033273 3300046681 Bacteria 1926
257 Ga0495658_0010714 3300046683 Bacteria 4590
258 Ga0495613_0085137 3300046689 Bacteria 2294
259 Ga0495624_0035417 3300046690 Bacteria 3223
260 Ga0495670_0235224 3300046691 Bacteria 975
261 Ga0495600_0014775 3300046809 Bacteria 4923
262 Ga0495604_0004379 3300047317 Bacteria 11186
263 Ga0495604_0111483 3300047317 Bacteria 1994
264 Ga0495636_0091102 3300047318 Bacteria 1324
265 Ga0495674_0197385 3300047319 Bacteria 1670
266 Ga0495676_0026701 3300047321 Bacteria 4966
267 Ga0495676_0030014 3300047321 Bacteria 4621
268 Ga0495680_0004421 3300047322 Bacteria 13439
269 Ga0495680_0012353 3300047322 Bacteria 7518
270 Ga0495680_0250020 3300047322 Bacteria 1257
271 Ga0495675_0033626 3300047444 Bacteria 3273
272 Ga0495684_0019396 3300047471 Bacteria 5235
273 Ga0495593_0058645 3300047673 Bacteria 2018
274 Ga0495593_0289321 3300047673 Bacteria 819
275 Ga0495602_0025120 3300048088 Bacteria 5770
276 Ga0496102_0225646 3300048905 Bacteria 1766
277 Ga0496102_1210988 3300048905 Bacteria 675
278 Ga0496104_0289945 3300048907 Bacteria 1549
279 Ga0496105_0046092 3300048908 Bacteria 3599
280 Ga0496105_0555342 3300048908 Bacteria 896
281 Ga0496108_0023822 3300048911 Bacteria 5038
282 Ga0496108_0294315 3300048911 Bacteria 1414
283 Ga0496108_0934545 3300048911 Bacteria 743
284 Ga0496109_0678104 3300048912 Bacteria 968
285 Ga0496110_0283046 3300048913 Bacteria 1510
286 Ga0496111_0105341 3300048914 Bacteria 2075
287 Ga0496112_0197143 3300048915 Bacteria 1974
288 Ga0496112_0978411 3300048915 Bacteria 766
289 Ga0496112_1249130 3300048915 Bacteria 659
290 Ga0496113_0358529 3300048916 Bacteria 1170
291 Ga0496115_0065350 3300048918 Bacteria 2938
292 Ga0496115_0336275 3300048918 Bacteria 1233
293 Ga0496115_0887780 3300048918 Bacteria 688
294 Ga0496121_0000832 3300048924 Bacteria 56038
295 Ga0496121_0043436 3300048924 Bacteria 3892
296 Ga0496122_0092151 3300048925 Bacteria 2061
297 Ga0501038_0042750 3300049574 Bacteria 3945
298 Ga0501039_0222640 3300049575 Bacteria 1483
299 Ga0501042_0008564 3300049578 Bacteria 6764
300 Ga0501047_0027683 3300049581 Bacteria 5461
301 Ga0501048_0009872 3300049582 Bacteria 7158
302 Ga0501073_0045600 3300049589 Bacteria 3087
303 Ga0501074_0005752 3300049590 Bacteria 8942
304 nmdc:mga00v17_296034_c1 3300050491 Bacteria 1051
305 nmdc:mga0yw44_171617_c1 3300050492 Bacteria 1424
306 Ga0495601_0308252 3300053077 Bacteria 1031
307 Ga0495601_0486436 3300053077 Bacteria 797
308 Ga0495612_0188241 3300053078 Bacteria 908
309 Ga0495595_0013272 3300053084 Bacteria 3479
310 Ga0495595_0028074 3300053084 Bacteria 2511
311 Ga0495619_0037836 3300053085 Bacteria 3146
312 Ga0495619_0114219 3300053085 Bacteria 1847
313 Ga0495619_0203217 3300053085 Bacteria 1372
314 Ga0500572_029875 3300053111 Bacteria 1511
315 Ga0500559_0010027 3300053136 Bacteria 4080
316 Ga0500559_0013453 3300053136 Bacteria 3466
317 Ga0466962_0001676 3300061719 Bacteria 10390
318 Ga0466962_0034462 3300061719 Bacteria 2423
319 Ga0466962_0096685 3300061719 Bacteria 1416
320 Ga0466962_0209888 3300061719 Bacteria 952
321 2515856124 2515154155 Bacteria 7985436
322 2552108877 2551306166 Bacteria 9731570
323 2585301615 2582581312 Bacteria 7308206
324 2644512454 2643221692 Bacteria 7282860
325 2676492553 2675903060 Bacteria 10051191
326 2819741857 2818991472 Bacteria 10089953
327 2889304146 2889300758 Bacteria 5690814
328 2939745460 2939743619 Bacteria 5762299
329 Ga0466962_0042294
330 Ga0070683_100248177
331 Ga0070680_100023564
332 Ga0070660_100003413
333 Ga0070714_100001827
334 Ga0070714_100007597
335 Ga0070714_100025916
336 Ga0070714_100037244
337 Ga0070714_100089550
338 Ga0070714_100150876
339 Ga0070714_100155118
340 Ga0070713_100059637
341 Ga0070713_100073329
342 Ga0070713_100161627
343 Ga0070713_100164055
344 Ga0070713_100227140
345 Ga0070713_100660030
346 Ga0070713_100843713
347 Ga0070710_10223289
348 Ga0070711_101061675
349 Ga0070708_100403185
350 Ga0070708_100510667
351 Ga0070708_100555408
352 Ga0070681_10004315
353 Ga0070681_10007241
354 Ga0070707_100058691
355 Ga0070707_100118369
356 Ga0070698_100044102
357 Ga0070699_100018742
358 Ga0070699_100165833
359 Ga0070679_100009018
360 Ga0070679_100056171
361 Ga0070684_100038644
362 Ga0070684_100375232
363 Ga0070684_100819061
364 Ga0070697_100243233
365 Ga0070695_100472316
366 Ga0070693_100109510
367 Ga0070665_100468453
368 Ga0068855_100011832
369 Ga0068855_100125986
370 Ga0068854_100066782
371 Ga0068856_100007079
372 Ga0068856_100367004
373 Ga0081455_10074984
374 Ga0070717_10006944
375 Ga0070717_10014781
376 Ga0070717_10087551
377 Ga0070717_10161344
378 Ga0070717_10164244
379 Ga0070717_10207781
380 Ga0070717_10239686
381 Ga0070717_10252919
382 Ga0070717_10261077
383 Ga0070717_10314055
384 Ga0075364_10138401
385 Ga0099794_10076092
386 Ga0111539_11130177
387 Ga0105245_10124094
388 Ga0105243_10002008
389 Ga0105241_10469332
390 Ga0105237_10045891
391 Ga0105237_10320437
392 Ga0105237_11253769
393 Ga0105238_10267881
394 Ga0105238_10680322
395 Ga0105239_10008392
396 Ga0105239_10512870
397 Ga0105246_10325234
398 Ga0157370_10287475
399 Ga0157370_10721154
400 Ga0157369_10355353
401 Ga0157372_10058733
402 Ga0157372_10148320
403 Ga0157372_10495117
404 Ga0157379_11141928
405 Ga0213873_10041484
406 Ga0213872_10104689
407 Ga0213874_10000284
408 Ga0213874_10028344
409 Ga0213874_10082393
410 Ga0213876_10013655
411 Ga0213876_10025383
412 Ga0213876_10052288
413 Ga0213875_10205518
414 Ga0207692_10027468
415 Ga0207707_10008593
416 Ga0207671_10026814
417 Ga0207693_10009793
418 Ga0207693_10525952
419 Ga0207660_10339563
420 Ga0207657_10025231
421 Ga0207652_10282965
422 Ga0207646_10305275
423 Ga0207646_10378476
424 Ga0207646_10547594
425 Ga0207687_10131863
426 Ga0207700_10054748
427 Ga0207700_10468053
428 Ga0207700_10803328
429 Ga0207700_11010450
430 Ga0207664_10001372
431 Ga0207664_10001744
432 Ga0207664_10007096
433 Ga0207664_10333910
434 Ga0207665_10124330
435 Ga0207661_10105386
436 Ga0207679_10498723
437 Ga0207640_10069765
438 Ga0207702_10090159
439 Ga0207702_10287877
440 Ga0209998_10046149
441 Ga0265318_10024412
442 Ga0265323_10013768
443 Ga0265322_10002918
444 Ga0265336_10012238
445 Ga0265338_10001391
446 Ga0265324_10000629
447 Ga0265325_10180422
448 Ga0265314_10029654
449 Ga0307406_10049948
450 Ga0307415_100016628
451 Ga0373934_0001260
452 Ga0373923_0020465
453 Ga0373936_0007053
454 Ga0373945_0010611
455 Ga0373953_0118688
456 Ga0373954_0069724
457 Ga0373956_0002803
458 Ga0373957_0004909
459 Ga0373943_0064248
460 Ga0373946_0028357
461 Ga0373955_0001248
462 Ga0373955_0052995
463 Ga0373924_0000725
464 Ga0373935_0008183
465 Ga0373933_0001938
466 Ga0373947_0182575
467 Ga0373937_0000837
468 Ga0373937_0054544
469 Ga0373925_0090717
470 Ga0395900_0003061
471 Ga0395900_0023268
472 Ga0395898_0000885
473 Ga0395898_0003394
474 Ga0436364_0412538
475 Ga0436364_0477885
476 Ga0436364_0491274
477 Ga0436364_0620143
478 Ga0436364_0757648
479 Ga0436365_0015580
480 Ga0436365_0807774
481 Ga0436365_0866311
482 Ga0436365_1042628
483 Ga0436365_1057104
484 Ga0436365_1587548
485 Ga0436365_1601193
486 Ga0436365_1791345
487 Ga0436361_0490574
488 Ga0436363_0051939
489 Ga0436363_0403192
490 Ga0436363_0546272
491 Ga0436363_0553593
492 Ga0436363_0837834
493 Ga0436363_1168229
494 Ga0436363_1337061
495 Ga0436363_1480012
496 Ga0436363_1704856
497 Ga0436362_0067724
498 Ga0436362_0374736
499 Ga0466969_0023669
500 Ga0466966_0066209
501 Ga0466966_0196814
502 Ga0466961_0012574
503 Ga0466961_0046153
504 Ga0466961_0194836
505 Ga0466961_0299980
506 Ga0466963_0002095
507 Ga0466963_0002927
508 Ga0466963_0016375
509 Ga0466963_0107801
510 Ga0466963_0118369
511 Ga0466963_0141400
512 Ga0466963_0182167
513 Ga0466964_0034809
514 Ga0466964_0173144
515 Ga0466964_0477954
516 Ga0466971_0008903
517 Ga0466971_0017598
518 Ga0466968_0177212
519 Ga0466970_0121262
520 Ga0466970_0163010
521 Ga0466957_0035530
522 Ga0466957_0073904
523 Ga0466959_0006725
524 Ga0466959_0009191
525 Ga0466959_0066511
526 Ga0466959_0116770
527 Ga0466959_0143992
528 Ga0466959_0152277
529 Ga0466959_0179042
530 Ga0466959_0402685
531 Ga0466958_0008508
532 Ga0466958_0031424
533 Ga0466958_0045914
534 Ga0466958_0087153
535 Ga0466958_0161312
536 Ga0466958_0288559
537 Ga0466967_0026840
538 Ga0466967_0062423
539 Ga0466967_0091875
540 Ga0466967_0138225
541 Ga0466967_0164336
542 Ga0466967_0321457
543 Ga0466967_0500713
544 Ga0466967_1076584
545 Ga0466967_1173636
546 Ga0495592_0008308
547 Ga0495603_0257931
548 Ga0495629_0016384
549 Ga0495629_0017783
550 Ga0495641_0011594
551 Ga0495651_0007329
552 Ga0495651_0021123
553 Ga0495653_0022625
554 Ga0495653_0176976
555 Ga0495580_0149156
556 Ga0495582_0019250
557 Ga0495662_0008150
558 Ga0495594_0000586
559 Ga0495608_0004957
560 Ga0495608_0009540
561 Ga0495628_0037643
562 Ga0495628_0418496
563 Ga0495630_0059426
564 Ga0495652_0209426
565 Ga0495652_0240428
566 Ga0495665_0009286
567 Ga0495640_0022895
568 Ga0495640_0201337
569 Ga0495640_0316108
570 Ga0495586_0049998
571 Ga0495587_0005676
572 Ga0495645_0041510
573 Ga0495645_0156673
574 Ga0495622_0006332
575 Ga0495667_0005060
576 Ga0495667_0046541
577 Ga0495634_0012815
578 Ga0495634_0224411
579 Ga0495588_0026683
580 Ga0495657_0013876
581 Ga0495657_0019620
582 Ga0495623_0028839
583 Ga0495623_0169807
584 Ga0495647_0033273
585 Ga0495658_0010714
586 Ga0495613_0085137
587 Ga0495624_0035417
588 Ga0495670_0235224
589 Ga0495600_0014775
590 Ga0495604_0004379
591 Ga0495604_0111483
592 Ga0495636_0091102
593 Ga0495674_0197385
594 Ga0495676_0026701
595 Ga0495676_0030014
596 Ga0495680_0004421
597 Ga0495680_0012353
598 Ga0495680_0250020
599 Ga0495675_0033626
600 Ga0495684_0019396
601 Ga0495593_0058645
602 Ga0495593_0289321
603 Ga0495602_0025120
604 Ga0496102_0225646
605 Ga0496102_1210988
606 Ga0496104_0289945
607 Ga0496105_0046092
608 Ga0496105_0555342
609 Ga0496108_0023822
610 Ga0496108_0294315
611 Ga0496108_0934545
612 Ga0496109_0678104
613 Ga0496110_0283046
614 Ga0496111_0105341
615 Ga0496112_0197143
616 Ga0496112_0978411
617 Ga0496112_1249130
618 Ga0496113_0358529
619 Ga0496115_0065350
620 Ga0496115_0336275
621 Ga0496115_0887780
622 Ga0496121_0000832
623 Ga0496121_0043436
624 Ga0496122_0092151
625 Ga0501038_0042750
626 Ga0501039_0222640
627 Ga0501042_0008564
628 Ga0501047_0027683
629 Ga0501048_0009872
630 Ga0501073_0045600
631 Ga0501074_0005752
632 nmdc:mga00v17_296034_c1
633 nmdc:mga0yw44_171617_c1
634 Ga0495601_0308252
635 Ga0495601_0486436
636 Ga0495612_0188241
637 Ga0495595_0013272
638 Ga0495595_0028074
639 Ga0495619_0037836
640 Ga0495619_0114219
641 Ga0495619_0203217
642 Ga0500572_029875
643 Ga0500559_0010027
644 Ga0500559_0013453
645 Ga0466962_0001676
646 Ga0466962_0034462
647 Ga0466962_0096685
648 Ga0466962_0209888
649 2515856124
650 2552108877
651 2585301615
652 2644512454
653 2676492553
654 2819741857
655 2889304146
656 2939745460

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

43

89

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
3dpj-assembly2.cif.gz_H the crystal structure of a tetr transcription regulator from silicibacter pomeroyi dss 0.9081 8 193
3dpj-assembly2.cif.gz_H the crystal structure of a tetr transcription regulator from silicibacter pomeroyi dss 0.8945 8 193
2g7s-assembly1.cif.gz_A-2 the crystal structure of transcriptional regulator, tetr family, from agrobacterium tumefaciens 0.8832 11 184
6zui-assembly1.cif.gz_A crystal structure of the cys-ser mutant of the cpyfp-based biosensor for hypochlorous acid 0.8687 10 91
3bru-assembly1.cif.gz_B crystal structure of regulatory protein tetr from rhodobacter sphaeroides 0.8681 11 184
ID Description Score Start End Superfamily
5mwrB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9836 13 57 1.10.10.60
2of7A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9804 11 51 1.10.10.60
6el2B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9802 10 57 1.10.10.60
3whcB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9759 10 53 1.10.10.60
3mvpA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9704 11 51 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A1M4EBF4-F1-model_v4 Transcriptional regulator, TetR family 0.9872 23 188 GO:0003677
GO:0006355
AF-A0A7W7MNZ1-F1-model_v4 AcrR family transcriptional regulator 0.9866 11 192 GO:0003677
GO:0006355
AF-A0A535FS39-F1-model_v4 TetR family transcriptional regulator 0.9854 11 154 GO:0000976
GO:0003700
AF-A0A7K0D692-F1-model_v4 HTH-type transcriptional regulator BetI 0.9807 10 191 GO:0003677
GO:0006355
AF-L0A740-F1-model_v4 Transcriptional regulator 0.9801 11 193 GO:0003677
GO:0006355

Map