F409424

General Info

Members Datasets Scaffolds Average Seq Length
328 226 657 370

Family's Representative Sequence

Representative Sequence 3300049572|Ga0501036_0013917|Ga0501036_0013917_1839_3005
Length 388
Sequence VSPLISRVPHGQSPLRTVQVLGGGNAGSWGHPLDDVLGGMHVRSLAEGLVARGVRVTVCAPAEADRVYGFTDTGAAHVHVPRSSDPVSVAALRTVCADADLVHAHGLHASFRAALALSGRRTPLVVTWHDHAQAEGPRAHLLRVLERRAAKSATVVLGTTSDLVDRARSRGARDARLAAIAVPRPRSGYTHPERPPSKVRAELGATERPLLLAVGSLDRHRGHELLLDAAHTWRRADPTPLTVIAGEGPLRPALQKRIEDEELPVRLLGRRDDVGELLAAADLALLPASREARSVLAQEALHARVPLVAARTGGIPELVGDAAELVPPKDPEAFAAAVLRLLGDPARRQELRERGARQAAGWPTEDDTVAQVLSIYDELTQPGTVGGA

Samples

Sample ID Description Type Environment
1 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
7 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
8 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
9 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
10 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
11 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
12 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
13 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
14 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
15 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
16 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
17 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
20 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
21 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
22 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
23 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
24 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
25 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
26 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
27 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
28 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
29 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
30 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
31 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
32 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
33 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
34 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
35 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
36 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
37 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
38 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
39 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
40 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
41 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
42 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
43 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
44 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
45 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
46 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
47 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
48 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
49 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
50 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
51 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
52 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
53 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
54 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
55 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
56 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
57 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
64 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
67 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
68 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
69 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
70 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
71 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
72 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
73 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
74 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
75 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
76 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
77 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
78 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
79 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
80 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
81 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
85 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
86 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
87 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
90 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
91 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
92 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
93 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
94 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
95 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
98 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
99 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
100 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
101 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
102 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
103 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
104 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
105 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
106 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
107 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
108 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
109 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
110 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
111 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
112 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
113 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
114 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
115 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
116 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
117 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
118 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
119 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
120 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
121 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
122 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
123 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
126 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
127 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
128 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
129 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
130 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
142 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
144 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
145 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
146 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
147 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
148 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
149 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
150 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
151 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
152 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
153 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
154 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
155 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
156 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
157 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
158 2643221578 Streptomyces sp. Root63 Isolate Unclassified
159 2643221647 Streptomyces sp. Root369 Isolate Unclassified
160 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
161 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
162 2643221714 Streptomyces sp. Root264 Isolate Unclassified
163 2767802112 Streptomyces avicenniae NRRL B-24776 Isolate Rhizosphere
164 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
165 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
166 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
167 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
168 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
169 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
170 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
171 2808606448 Streptomyces sp. 193411 Isolate Unclassified
172 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
173 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
174 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
175 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
176 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
177 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
178 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
179 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
180 2862574272 Streptomyces sp. AcE210 Isolate Nodule
181 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
182 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
183 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
184 2867428634 Streptomyces sp. RP5T Isolate Unclassified
185 2867475112 Streptomyces sp. TM32 Isolate Unclassified
186 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
187 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
188 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
189 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
190 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
191 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
192 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
193 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
194 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
195 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
196 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
197 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
198 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
199 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
200 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
201 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
202 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
203 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
204 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
205 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
206 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
207 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
208 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
209 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
210 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
211 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
212 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
213 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
214 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
215 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
216 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
217 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
218 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
219 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
220 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
221 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
222 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
223 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
224 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
225 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
226 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 76.83
Metatranscriptomes 0.3
Isolates 22.87

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.18
Nodule 1.22
Rhizoplane 0.91
Rhizosphere 75.61
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501036_0013917 3300049572 Bacteria 6690
2 rootH1_10002957 3300003316 Bacteria 1424
3 rootH1_10009964 3300003316 Bacteria 3182
4 rootH1_10009964 3300003323 Bacteria 8042
5 rootH2_10053459 3300003320 Bacteria 3732
6 JGI25160J50197_1012358 3300003354 Bacteria 2967
7 Ga0006562J51391_1076153 3300003578 Bacteria 1708
8 Ga0075368_10005848 3300006042 Bacteria 4256
9 Ga0075363_100012136 3300006048 Bacteria 4144
10 Ga0075367_10049300 3300006178 Bacteria 2482
11 Ga0075370_10081188 3300006353 Bacteria 1864
12 Ga0099826_10056572 3300006948 Bacteria 2587
13 Ga0157369_10460900 3300013105 Bacteria 1316
14 Ga0182008_10002172 3300014497 Bacteria 12480
15 Ga0182007_10000584 3300015262 Bacteria 21416
16 Ga0183367_1010 3300015688 Bacteria 416164
17 Ga0209758_1012104 3300025297 Bacteria 4879
18 Ga0207426_1002272 3300025302 Bacteria 12684
19 Ga0207426_1002539 3300025302 Bacteria 11453
20 Ga0207426_1012763 3300025302 Bacteria 3144
21 Ga0207426_1029382 3300025302 Bacteria 1813
22 Ga0207647_10076675 3300025904 Bacteria 2010
23 Ga0207639_10075154 3300026041 Bacteria 2656
24 Ga0209371_1029125 3300027312 Bacteria 1223
25 Ga0307517_10001681 3300028786 Bacteria 36578
26 Ga0307515_10000544 3300028794 Bacteria 88859
27 Ga0268256_1033158 3300030500 Bacteria 1223
28 Ga0307511_10001522 3300030521 Bacteria 24502
29 Ga0307511_10102488 3300030521 Bacteria 1870
30 Ga0307512_10008602 3300030522 Bacteria 9923
31 Ga0307513_10006579 3300031456 Bacteria 15174
32 Ga0307513_10161950 3300031456 Bacteria 2128
33 Ga0307509_10017336 3300031507 Bacteria 8293
34 Ga0307509_10018485 3300031507 Bacteria 7992
35 Ga0307509_10019726 3300031507 Bacteria 7678
36 Ga0307508_10065195 3300031616 Bacteria 3209
37 Ga0307508_10135967 3300031616 Bacteria 2061
38 Ga0307508_10183913 3300031616 Bacteria 1692
39 Ga0307514_10005547 3300031649 Bacteria 11208
40 Ga0307514_10108268 3300031649 Bacteria 1977
41 Ga0307516_10006120 3300031730 Bacteria 14184
42 Ga0307516_10014589 3300031730 Bacteria 8304
43 Ga0307518_10031037 3300031838 Bacteria 3871
44 Ga0307518_10099743 3300031838 Bacteria 2080
45 Ga0307507_10052306 3300033179 Bacteria 3917
46 Ga0307507_10096873 3300033179 Bacteria 2492
47 Ga0307510_10029049 3300033180 Bacteria 6300
48 Ga0307510_10075692 3300033180 Bacteria 3317
49 Ga0395900_0216754 3300037418 Bacteria 1931
50 Ga0395898_0002252 3300037466 Bacteria 23420
51 Ga0395898_0024167 3300037466 Bacteria 6131
52 Ga0395898_0137109 3300037466 Bacteria 2343
53 Ga0395901_0215338 3300038443 Bacteria 2009
54 Ga0439436_0004452 3300041404 Bacteria 4292
55 Ga0439439_0003955 3300041406 Bacteria 3304
56 Ga0451853_1007860 3300041512 Bacteria 1927
57 Ga0439442_004060 3300042002 Bacteria 2902
58 Ga0439448_0006150 3300042005 Bacteria 3445
59 Ga0439449_0001015 3300042007 Bacteria 11061
60 Ga0439457_000036 3300042014 Bacteria 28398
61 Ga0439457_000138 3300042014 Bacteria 18420
62 Ga0450894_000636 3300042131 Bacteria 5873
63 Ga0450896_000188 3300042133 Bacteria 5286
64 Ga0450898_000418 3300042134 Bacteria 4946
65 Ga0450899_000557 3300042135 Bacteria 4253
66 Ga0450903_000049 3300042138 Bacteria 23582
67 Ga0450903_010772 3300042138 Bacteria 1477
68 Ga0450906_000440 3300042145 Bacteria 8676
69 Ga0439458_0001312 3300042157 Bacteria 6282
70 Ga0439458_0030397 3300042157 Bacteria 1285
71 Ga0466969_0022005 3300044656 Bacteria 3295
72 Ga0466969_0041122 3300044656 Bacteria 2314
73 Ga0466972_0000620 3300044658 Bacteria 17311
74 Ga0466972_0001850 3300044658 Bacteria 10369
75 Ga0466972_0008502 3300044658 Bacteria 5150
76 Ga0466972_0022299 3300044658 Bacteria 3154
77 Ga0466965_0002401 3300044683 Bacteria 7941
78 Ga0466965_0113008 3300044683 Bacteria 1397
79 Ga0466966_0001647 3300044684 Bacteria 14406
80 Ga0466966_0144734 3300044684 Bacteria 1451
81 Ga0466961_0001431 3300044693 Bacteria 14807
82 Ga0466963_0000252 3300044694 Bacteria 23516
83 Ga0466963_0007318 3300044694 Bacteria 6579
84 Ga0466964_0004047 3300044706 Bacteria 5391
85 Ga0466971_0002557 3300044719 Bacteria 7687
86 Ga0466970_0001793 3300044765 Bacteria 10343
87 Ga0466970_0006061 3300044765 Bacteria 6028
88 Ga0466957_0005054 3300044842 Bacteria 7382
89 Ga0466960_0052373 3300044901 Bacteria 1974
90 Ga0466959_0008606 3300045049 Bacteria 7222
91 Ga0466959_0102930 3300045049 Bacteria 2043
92 Ga0466958_0089566 3300045836 Bacteria 1902
93 Ga0466967_0009369 3300045976 Bacteria 7260
94 Ga0466967_0051788 3300045976 Bacteria 3600
95 Ga0495617_064828 3300046452 Bacteria 1205
96 Ga0495592_0056060 3300046454 Bacteria 2913
97 Ga0495603_0022828 3300046455 Bacteria 3786
98 Ga0495603_0036624 3300046455 Bacteria 2945
99 Ga0495603_0037093 3300046455 Bacteria 2924
100 Ga0495603_0094421 3300046455 Bacteria 1747
101 Ga0495629_0000810 3300046459 Bacteria 25297
102 Ga0495629_0009311 3300046459 Bacteria 7185
103 Ga0495629_0093977 3300046459 Bacteria 2092
104 Ga0495638_0070824 3300046460 Bacteria 2134
105 Ga0495582_0055532 3300046473 Bacteria 2183
106 Ga0495582_0067439 3300046473 Bacteria 1977
107 Ga0495582_0069453 3300046473 Bacteria 1948
108 Ga0495605_0031463 3300046474 Bacteria 2710
109 Ga0495662_0002567 3300046476 Bacteria 9168
110 Ga0495662_0053450 3300046476 Bacteria 1950
111 Ga0495664_0001113 3300046477 Bacteria 13913
112 Ga0495585_0077086 3300046492 Bacteria 1810
113 Ga0495585_0105693 3300046492 Bacteria 1501
114 Ga0495594_0038214 3300046499 Bacteria 2620
115 Ga0495594_0060613 3300046499 Bacteria 2093
116 Ga0495594_0130071 3300046499 Bacteria 1425
117 Ga0495583_0016360 3300046506 Bacteria 3990
118 Ga0495606_0010263 3300046507 Bacteria 7800
119 Ga0495608_0124350 3300046511 Bacteria 1653
120 Ga0495610_0029184 3300046512 Bacteria 2909
121 Ga0495618_0084076 3300046514 Bacteria 2033
122 Ga0495618_0161460 3300046514 Bacteria 1428
123 Ga0495620_0012590 3300046515 Bacteria 4360
124 Ga0495628_0123820 3300046516 Bacteria 1981
125 Ga0495630_0083743 3300046517 Bacteria 2408
126 Ga0495630_0109725 3300046517 Bacteria 2090
127 Ga0495631_0057232 3300046518 Bacteria 1697
128 Ga0495643_0005357 3300046522 Bacteria 8688
129 Ga0495654_0074218 3300046530 Bacteria 1607
130 Ga0495640_0012351 3300046533 Bacteria 6528
131 Ga0495640_0129431 3300046533 Bacteria 1635
132 Ga0495586_0067993 3300046535 Bacteria 1943
133 Ga0495587_0055603 3300046536 Bacteria 2330
134 Ga0495609_0009730 3300046538 Bacteria 4637
135 Ga0495645_0115165 3300046543 Bacteria 1899
136 Ga0495622_0034084 3300046557 Bacteria 2375
137 Ga0495622_0035525 3300046557 Bacteria 2324
138 Ga0495622_0097248 3300046557 Bacteria 1350
139 Ga0495667_0062409 3300046559 Bacteria 2442
140 Ga0495668_0011962 3300046616 Bacteria 5167
141 Ga0495634_0002881 3300046642 Bacteria 14112
142 Ga0495611_0011290 3300046648 Bacteria 3787
143 Ga0495625_0056355 3300046660 Bacteria 2798
144 Ga0495625_0108135 3300046660 Bacteria 1903
145 Ga0495625_0171880 3300046660 Bacteria 1446
146 Ga0495635_0006591 3300046663 Bacteria 8103
147 Ga0495635_0113268 3300046663 Bacteria 1852
148 Ga0495661_0017902 3300046665 Bacteria 4670
149 Ga0495588_0003436 3300046674 Bacteria 6885
150 Ga0495588_0006584 3300046674 Bacteria 5241
151 Ga0495588_0051548 3300046674 Bacteria 2119
152 Ga0495657_0000839 3300046675 Bacteria 27194
153 Ga0495657_0001015 3300046675 Bacteria 24750
154 Ga0495657_0029843 3300046675 Bacteria 3822
155 Ga0495599_0192279 3300046678 Bacteria 1255
156 Ga0495623_0085296 3300046679 Bacteria 1948
157 Ga0495646_0010038 3300046680 Bacteria 6020
158 Ga0495646_0054504 3300046680 Bacteria 2405
159 Ga0495658_0004990 3300046683 Bacteria 6516
160 Ga0495613_0002916 3300046689 Bacteria 12815
161 Ga0495613_0018876 3300046689 Bacteria 5137
162 Ga0495613_0048615 3300046689 Bacteria 3132
163 Ga0495613_0087526 3300046689 Bacteria 2257
164 Ga0495624_0086043 3300046690 Bacteria 1941
165 Ga0495670_0050044 3300046691 Bacteria 2091
166 Ga0495671_0007209 3300046692 Bacteria 6358
167 Ga0495649_0047219 3300046694 Bacteria 2342
168 Ga0495649_0094883 3300046694 Bacteria 1588
169 Ga0495589_0025968 3300046794 Bacteria 2969
170 Ga0495589_0029000 3300046794 Bacteria 2790
171 Ga0495600_0015772 3300046809 Bacteria 4783
172 Ga0495581_0000797 3300047315 Bacteria 16733
173 Ga0495581_0083388 3300047315 Bacteria 1851
174 Ga0495604_0000467 3300047317 Bacteria 35655
175 Ga0495604_0036015 3300047317 Bacteria 3904
176 Ga0495636_0007615 3300047318 Bacteria 4260
177 Ga0495636_0037004 3300047318 Bacteria 2015
178 Ga0495674_0189544 3300047319 Bacteria 1710
179 Ga0495676_0003999 3300047321 Bacteria 13425
180 Ga0495676_0024525 3300047321 Bacteria 5219
181 Ga0495676_0035550 3300047321 Bacteria 4165
182 Ga0495680_0037021 3300047322 Bacteria 3911
183 Ga0495687_001974 3300047443 Bacteria 17491
184 Ga0495687_004066 3300047443 Bacteria 10136
185 Ga0495687_010044 3300047443 Bacteria 5226
186 Ga0495687_034619 3300047443 Bacteria 2280
187 Ga0495687_086281 3300047443 Bacteria 1214
188 Ga0495675_0038897 3300047444 Bacteria 3029
189 Ga0495685_009528 3300047447 Bacteria 3248
190 Ga0495685_013266 3300047447 Bacteria 2796
191 Ga0495685_016302 3300047447 Bacteria 2537
192 Ga0495685_029443 3300047447 Bacteria 1888
193 Ga0495685_056665 3300047447 Bacteria 1324
194 Ga0495681_0010454 3300047470 Bacteria 5617
195 Ga0495681_0057686 3300047470 Bacteria 1802
196 Ga0495686_0008778 3300047472 Bacteria 7366
197 Ga0495593_0000836 3300047673 Bacteria 17924
198 Ga0495593_0015301 3300047673 Bacteria 4348
199 Ga0495593_0097545 3300047673 Bacteria 1509
200 Ga0495602_0034257 3300048088 Bacteria 4753
201 Ga0495614_0000600 3300048089 Bacteria 15075
202 Ga0495614_0004232 3300048089 Bacteria 6467
203 Ga0495614_0035316 3300048089 Bacteria 2147
204 Ga0496108_0106589 3300048911 Bacteria 2393
205 Ga0496109_0021493 3300048912 Bacteria 5707
206 Ga0501031_0073099 3300049568 Bacteria 2233
207 Ga0501032_0011358 3300049569 Bacteria 6396
208 Ga0501032_0039705 3300049569 Bacteria 3200
209 Ga0501033_0002591 3300049570 Bacteria 15240
210 Ga0501033_0003079 3300049570 Bacteria 13858
211 Ga0501033_0016634 3300049570 Bacteria 5564
212 Ga0501033_0031444 3300049570 Bacteria 3989
213 Ga0501034_0007133 3300049571 Bacteria 11921
214 Ga0501034_0128434 3300049571 Bacteria 2519
215 Ga0501034_0147959 3300049571 Bacteria 2325
216 Ga0501034_0224146 3300049571 Bacteria 1831
217 Ga0501034_0344437 3300049571 Bacteria 1420
218 Ga0501036_0002025 3300049572 Bacteria 15774
219 Ga0501037_0061666 3300049573 Bacteria 2735
220 Ga0501037_0162377 3300049573 Bacteria 1592
221 Ga0501038_0000677 3300049574 Bacteria 30374
222 Ga0501038_0055397 3300049574 Bacteria 3406
223 Ga0501038_0219767 3300049574 Bacteria 1516
224 Ga0501039_0276348 3300049575 Bacteria 1320
225 Ga0501043_0001400 3300049579 Bacteria 21063
226 Ga0501043_0025622 3300049579 Bacteria 4627
227 Ga0501043_0214346 3300049579 Bacteria 1492
228 Ga0501046_0240504 3300049580 Bacteria 1335
229 Ga0501047_0018965 3300049581 Bacteria 6597
230 Ga0501047_0046753 3300049581 Bacteria 4182
231 Ga0501047_0147466 3300049581 Bacteria 2229
232 Ga0501047_0205992 3300049581 Bacteria 1826
233 Ga0501048_0186486 3300049582 Bacteria 1470
234 Ga0501068_0054521 3300049584 Bacteria 2422
235 Ga0501070_0000421 3300049586 Bacteria 38478
236 Ga0501070_0170708 3300049586 Bacteria 1791
237 Ga0501074_0002012 3300049590 Bacteria 14002
238 Ga0501035_0003041 3300049822 Bacteria 16087
239 Ga0501035_0007230 3300049822 Bacteria 10386
240 Ga0501035_0022045 3300049822 Bacteria 5851
241 Ga0501035_0099239 3300049822 Bacteria 2556
242 Ga0501044_0005278 3300049823 Bacteria 14369
243 Ga0501044_0009863 3300049823 Bacteria 10381
244 Ga0501044_0032251 3300049823 Bacteria 5508
245 nmdc:mga03n38_40722_c1 3300050490 Bacteria 2020
246 nmdc:mga06z11_7562_c1 3300050494 Bacteria 4481
247 nmdc:mga04h51_2021_c1 3300050495 Bacteria 4752
248 nmdc:mga07m45_80231_c1 3300050496 Bacteria 1863
249 Ga0500640_014912 3300053095 Bacteria 3242
250 Ga0500553_047864 3300053101 Bacteria 2064
251 Ga0500572_008149 3300053111 Bacteria 2442
252 Ga0466962_0000087 3300061719 Bacteria 37548
253 Ga0466962_0016124 3300061719 Bacteria 3604
254 Ga0466962_0029095 3300061719 Bacteria 2644
255 2547406822 2547132111 Bacteria 8013147
256 2585296672 2582581312 Bacteria 7308206
257 2585303921 2582581313 Bacteria 10042643
258 2585315398 2582581314 Bacteria 11452267
259 2616695985 2616644814 Bacteria 11555299
260 2616900482 2616644941 Bacteria 8510691
261 2643904794 2643221578 Bacteria 9213798
262 2644268397 2643221647 Bacteria 10741251
263 2644405940 2643221673 Bacteria 9196637
264 2644438372 2643221678 Bacteria 9540101
265 2644629338 2643221714 Bacteria 9015452
266 2768645040 2767802112 Bacteria 6465194
267 2784587029 2784132148 Bacteria 8627943
268 2785345387 2784746763 Bacteria 9783172
269 2785367499 2784746768 Bacteria 10036182
270 2786668560 2786546132 Bacteria 10419719
271 2793984263 2791355406 Bacteria 11364898
272 2808847989 2808606359 Bacteria 9866990
273 2808918748 2808606375 Bacteria 9466072
274 2809230590 2808606448 Bacteria 8656184
275 2812360002 2811994879 Bacteria 9313447
276 2812482074 2811994917 Bacteria 7761064
277 2819696724 2818991463 Bacteria 7948711
278 2852638028 2852635781 Bacteria 8251373
279 2862180371 2862178590 Bacteria 8583590
280 2862289291 2862281513 Bacteria 9621493
281 2862390944 2862382967 Bacteria 10317375
282 2862513000 2862507626 Bacteria 9425308
283 2862583363 2862574272 Bacteria 10567477
284 2862710659 2862705112 Bacteria 6563286
285 2863406649 2863404153 Bacteria 9672205
286 2867352660 2867346516 Bacteria 7608576
287 2867436099 2867428634 Bacteria 9590268
288 2867479116 2867475112 Bacteria 6909112
289 2873157379 2873151551 Bacteria 8625867
290 2875392991 2875391855 Bacteria 7600475
291 2877683044 2877676314 Bacteria 9512378
292 2912722052 2912715099 Bacteria 9460473
293 2912725817 2912723979 Bacteria 8557534
294 2919473581 2919468124 Bacteria 9133025
295 2946051711 2946045630 Bacteria 8527308
296 2946065892 2946064051 Bacteria 8957905
297 2946074220 2946072368 Bacteria 8999607
298 2947231511 2947224130 Bacteria 9938529
299 2954010722 2954002825 Bacteria 9173742
300 2954388266 2954380949 Bacteria 10050426
301 2954674836 2954673503 Bacteria 9685905
302 2954689297 2954682443 Bacteria 9862841
303 2954699070 2954691527 Bacteria 10720516
304 2954703149 2954701450 Bacteria 10834262
305 2954718024 2954711539 Bacteria 10867210
306 2954727991 2954721474 Bacteria 10456478
307 2954733813 2954731030 Bacteria 10243860
308 2954746888 2954740390 Bacteria 10229294
309 2954752698 2954749733 Bacteria 10366972
310 2954766002 2954759201 Bacteria 9358192
311 2966604074 2966598605 Bacteria 7676064
312 2990047083 2990044586 Bacteria 6603797
313 2990065379 2990059506 Bacteria 9321252
314 2997454019 2997451912 Bacteria 8492419
315 2997601956 2997600082 Bacteria 9896405
316 3006495341 3006493962 Bacteria 8825450
317 8008489201 8008485437 Bacteria 7198341
318 8008561671 8008558824 Bacteria 10610750
319 8008580452 8008574985 Bacteria 7815457
320 8023624429 8023623736 Bacteria 8593882
321 8025527648 8025524527 Bacteria 7197316
322 8047899940 8047893842 Bacteria 11723082
323 8048358989 8048356638 Bacteria 11044339
324 8048376889 8048369669 Bacteria 11666822
325 8048385942 8048379754 Bacteria 11877923
326 8048411998 8048406513 Bacteria 8936924
327 8054167208 8054160619 Bacteria 7783213
328 8056668989 8056667051 Bacteria 6953971
329 8056835382 8056829672 Bacteria 9045328
330 Ga0501036_0013917
331 rootH1_10002957
332 rootH1_10009964
333 rootH2_10053459
334 JGI25160J50197_1012358
335 Ga0006562J51391_1076153
336 Ga0075368_10005848
337 Ga0075363_100012136
338 Ga0075367_10049300
339 Ga0075370_10081188
340 Ga0099826_10056572
341 Ga0157369_10460900
342 Ga0182008_10002172
343 Ga0182007_10000584
344 Ga0183367_1010
345 Ga0209758_1012104
346 Ga0207426_1002272
347 Ga0207426_1002539
348 Ga0207426_1012763
349 Ga0207426_1029382
350 Ga0207647_10076675
351 Ga0207639_10075154
352 Ga0209371_1029125
353 Ga0307517_10001681
354 Ga0307515_10000544
355 Ga0268256_1033158
356 Ga0307511_10001522
357 Ga0307511_10102488
358 Ga0307512_10008602
359 Ga0307513_10006579
360 Ga0307513_10161950
361 Ga0307509_10017336
362 Ga0307509_10018485
363 Ga0307509_10019726
364 Ga0307508_10065195
365 Ga0307508_10135967
366 Ga0307508_10183913
367 Ga0307514_10005547
368 Ga0307514_10108268
369 Ga0307516_10006120
370 Ga0307516_10014589
371 Ga0307518_10031037
372 Ga0307518_10099743
373 Ga0307507_10052306
374 Ga0307507_10096873
375 Ga0307510_10029049
376 Ga0307510_10075692
377 Ga0395900_0216754
378 Ga0395898_0002252
379 Ga0395898_0024167
380 Ga0395898_0137109
381 Ga0395901_0215338
382 Ga0439436_0004452
383 Ga0439439_0003955
384 Ga0451853_1007860
385 Ga0439442_004060
386 Ga0439448_0006150
387 Ga0439449_0001015
388 Ga0439457_000036
389 Ga0439457_000138
390 Ga0450894_000636
391 Ga0450896_000188
392 Ga0450898_000418
393 Ga0450899_000557
394 Ga0450903_000049
395 Ga0450903_010772
396 Ga0450906_000440
397 Ga0439458_0001312
398 Ga0439458_0030397
399 Ga0466969_0022005
400 Ga0466969_0041122
401 Ga0466972_0000620
402 Ga0466972_0001850
403 Ga0466972_0008502
404 Ga0466972_0022299
405 Ga0466965_0002401
406 Ga0466965_0113008
407 Ga0466966_0001647
408 Ga0466966_0144734
409 Ga0466961_0001431
410 Ga0466963_0000252
411 Ga0466963_0007318
412 Ga0466964_0004047
413 Ga0466971_0002557
414 Ga0466970_0001793
415 Ga0466970_0006061
416 Ga0466957_0005054
417 Ga0466960_0052373
418 Ga0466959_0008606
419 Ga0466959_0102930
420 Ga0466958_0089566
421 Ga0466967_0009369
422 Ga0466967_0051788
423 Ga0495617_064828
424 Ga0495592_0056060
425 Ga0495603_0022828
426 Ga0495603_0036624
427 Ga0495603_0037093
428 Ga0495603_0094421
429 Ga0495629_0000810
430 Ga0495629_0009311
431 Ga0495629_0093977
432 Ga0495638_0070824
433 Ga0495582_0055532
434 Ga0495582_0067439
435 Ga0495582_0069453
436 Ga0495605_0031463
437 Ga0495662_0002567
438 Ga0495662_0053450
439 Ga0495664_0001113
440 Ga0495585_0077086
441 Ga0495585_0105693
442 Ga0495594_0038214
443 Ga0495594_0060613
444 Ga0495594_0130071
445 Ga0495583_0016360
446 Ga0495606_0010263
447 Ga0495608_0124350
448 Ga0495610_0029184
449 Ga0495618_0084076
450 Ga0495618_0161460
451 Ga0495620_0012590
452 Ga0495628_0123820
453 Ga0495630_0083743
454 Ga0495630_0109725
455 Ga0495631_0057232
456 Ga0495643_0005357
457 Ga0495654_0074218
458 Ga0495640_0012351
459 Ga0495640_0129431
460 Ga0495586_0067993
461 Ga0495587_0055603
462 Ga0495609_0009730
463 Ga0495645_0115165
464 Ga0495622_0034084
465 Ga0495622_0035525
466 Ga0495622_0097248
467 Ga0495667_0062409
468 Ga0495668_0011962
469 Ga0495634_0002881
470 Ga0495611_0011290
471 Ga0495625_0056355
472 Ga0495625_0108135
473 Ga0495625_0171880
474 Ga0495635_0006591
475 Ga0495635_0113268
476 Ga0495661_0017902
477 Ga0495588_0003436
478 Ga0495588_0006584
479 Ga0495588_0051548
480 Ga0495657_0000839
481 Ga0495657_0001015
482 Ga0495657_0029843
483 Ga0495599_0192279
484 Ga0495623_0085296
485 Ga0495646_0010038
486 Ga0495646_0054504
487 Ga0495658_0004990
488 Ga0495613_0002916
489 Ga0495613_0018876
490 Ga0495613_0048615
491 Ga0495613_0087526
492 Ga0495624_0086043
493 Ga0495670_0050044
494 Ga0495671_0007209
495 Ga0495649_0047219
496 Ga0495649_0094883
497 Ga0495589_0025968
498 Ga0495589_0029000
499 Ga0495600_0015772
500 Ga0495581_0000797
501 Ga0495581_0083388
502 Ga0495604_0000467
503 Ga0495604_0036015
504 Ga0495636_0007615
505 Ga0495636_0037004
506 Ga0495674_0189544
507 Ga0495676_0003999
508 Ga0495676_0024525
509 Ga0495676_0035550
510 Ga0495680_0037021
511 Ga0495687_001974
512 Ga0495687_004066
513 Ga0495687_010044
514 Ga0495687_034619
515 Ga0495687_086281
516 Ga0495675_0038897
517 Ga0495685_009528
518 Ga0495685_013266
519 Ga0495685_016302
520 Ga0495685_029443
521 Ga0495685_056665
522 Ga0495681_0010454
523 Ga0495681_0057686
524 Ga0495686_0008778
525 Ga0495593_0000836
526 Ga0495593_0015301
527 Ga0495593_0097545
528 Ga0495602_0034257
529 Ga0495614_0000600
530 Ga0495614_0004232
531 Ga0495614_0035316
532 Ga0496108_0106589
533 Ga0496109_0021493
534 Ga0501031_0073099
535 Ga0501032_0011358
536 Ga0501032_0039705
537 Ga0501033_0002591
538 Ga0501033_0003079
539 Ga0501033_0016634
540 Ga0501033_0031444
541 Ga0501034_0007133
542 Ga0501034_0128434
543 Ga0501034_0147959
544 Ga0501034_0224146
545 Ga0501034_0344437
546 Ga0501036_0002025
547 Ga0501037_0061666
548 Ga0501037_0162377
549 Ga0501038_0000677
550 Ga0501038_0055397
551 Ga0501038_0219767
552 Ga0501039_0276348
553 Ga0501043_0001400
554 Ga0501043_0025622
555 Ga0501043_0214346
556 Ga0501046_0240504
557 Ga0501047_0018965
558 Ga0501047_0046753
559 Ga0501047_0147466
560 Ga0501047_0205992
561 Ga0501048_0186486
562 Ga0501068_0054521
563 Ga0501070_0000421
564 Ga0501070_0170708
565 Ga0501074_0002012
566 Ga0501035_0003041
567 Ga0501035_0007230
568 Ga0501035_0022045
569 Ga0501035_0099239
570 Ga0501044_0005278
571 Ga0501044_0009863
572 Ga0501044_0032251
573 nmdc:mga03n38_40722_c1
574 nmdc:mga06z11_7562_c1
575 nmdc:mga04h51_2021_c1
576 nmdc:mga07m45_80231_c1
577 Ga0500640_014912
578 Ga0500553_047864
579 Ga0500572_008149
580 Ga0466962_0000087
581 Ga0466962_0016124
582 Ga0466962_0029095
583 2547406822
584 2585296672
585 2585303921
586 2585315398
587 2616695985
588 2616900482
589 2643904794
590 2644268397
591 2644405940
592 2644438372
593 2644629338
594 2768645040
595 2784587029
596 2785345387
597 2785367499
598 2786668560
599 2793984263
600 2808847989
601 2808918748
602 2809230590
603 2812360002
604 2812482074
605 2819696724
606 2852638028
607 2862180371
608 2862289291
609 2862390944
610 2862513000
611 2862583363
612 2862710659
613 2863406649
614 2867352660
615 2867436099
616 2867479116
617 2873157379
618 2875392991
619 2877683044
620 2912722052
621 2912725817
622 2919473581
623 2946051711
624 2946065892
625 2946074220
626 2947231511
627 2954010722
628 2954388266
629 2954674836
630 2954689297
631 2954699070
632 2954703149
633 2954718024
634 2954727991
635 2954733813
636 2954746888
637 2954752698
638 2954766002
639 2966604074
640 2990047083
641 2990065379
642 2997454019
643 2997601956
644 3006495341
645 8008489201
646 8008561671
647 8008580452
648 8023624429
649 8025527648
650 8047899940
651 8048358989
652 8048376889
653 8048385942
654 8048411998
655 8054167208
656 8056668989
657 8056835382

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

197

358

0.95

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

208

344

0.92

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

38

181

0.9

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

38

183

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.905 201 354
3qhp-assembly2.cif.gz_B crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.895 201 354
3qhp-assembly2.cif.gz_B crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8838 201 354
3qhp-assembly1.cif.gz_A crystal structure of the catalytic domain of cholesterol-alpha-glucosyltransferase from helicobacter pylori 0.8728 201 354
5i45-assembly1.cif.gz_A 1.35 angstrom crystal structure of c-terminal domain of glycosyl transferase group 1 family protein (lpcc) from francisella tularensis. 0.8713 188 353
ID Description Score Start End Superfamily
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9394 205 358 3.40.50.2000
4x6lA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9375 202 352 3.40.50.2000
af_P9WMY9_212_374_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9362 198 350 3.40.50.2000
af_Q59002_191_368_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9287 185 353 3.40.50.2000
af_Q58459_195_388_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9287 201 352 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A7J5UNJ0-F1-model_v4 Glycosyltransferase 0.9476 235 370 GO:0016757
AF-A0A7X9KP03-F1-model_v4 Glycosyltransferase family 4 protein 0.9451 266 371 GO:0009103
GO:0016757
GO:0045226
AF-A0A3M2CEI8-F1-model_v4 Glycosyltransferase 0.9296 233 371 GO:0009103
GO:0016757
GO:0045226
AF-A0A554IE75-F1-model_v4 Group 1 glycosyl transferase 0.917 201 370 GO:0009103
GO:0016757
GO:0045226
AF-A0A662CBQ0-F1-model_v4 Uncharacterized protein 0.9078 202 378

Map