F409177

General Info

Members Datasets Scaffolds Average Seq Length
328 212 656 252

Family's Representative Sequence

Representative Sequence 3300006028|Ga0070717_10100533|Ga0070717_101005334
Length 262
Sequence MSHRTPIRMPQPTERLRALVEGYLAELALAPDLGSLEEPMRHALGGKRVRPVLCLATGDALGVPVENLLPAAAAVELVHSFSLVHDDLPSLDDDRERRGAPSVWAQYGEATAILAGDALLVEAMRLALMYPTGAVARELVDATLAMIAGQQLDLEGGVALDRLHALKTGALFSASVMCALWAAEVPVDEHPPWRAFAAELGLLFQIVDDLLDGDGYVHEVGEGGARRLAEEARERAHVRLAEIDTDSEVLASIVDELTVRTS

Samples

Sample ID Description Type Environment
1 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
2 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
31 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
50 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
53 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
79 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
83 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
86 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
91 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
92 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
93 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
94 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
95 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
96 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
97 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
98 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
103 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
104 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
105 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
106 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
107 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
108 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
109 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
110 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
111 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
112 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
113 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
114 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
115 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
116 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
117 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
118 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
119 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
120 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
121 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
122 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
123 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
124 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
125 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
126 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
127 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
128 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
129 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
130 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
131 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
132 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
133 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
137 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
138 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
139 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
140 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
141 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
142 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
143 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
144 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
145 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
146 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
147 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
148 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
149 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
150 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
151 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
152 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
155 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
156 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
157 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
158 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
159 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
160 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
161 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
162 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
165 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
184 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
185 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
186 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
187 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
188 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
189 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
190 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
191 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
192 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
193 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
194 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
196 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
197 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
198 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
199 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
200 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
201 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
202 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
203 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
204 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
205 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
206 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
207 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
208 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
209 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
210 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
211 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
212 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.78
Metatranscriptomes 1.22
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.22
Nodule 0
Rhizoplane 9.15
Rhizosphere 88.72
Stem 0
Stem Tuber 0
Unclassified 1.52

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070717_10100533 3300006028 Bacteria 2455
2 JGI25407J50210_10003635 3300003373 Bacteria 3710
3 Ga0070658_10054529 3300005327 Bacteria 3246
4 Ga0070658_10409766 3300005327 Bacteria 1165
5 Ga0070683_100044379 3300005329 Bacteria 4099
6 Ga0070670_100016766 3300005331 Bacteria 6287
7 Ga0070680_100065090 3300005336 Bacteria 2988
8 Ga0070680_100166305 3300005336 Bacteria 1854
9 Ga0070682_100199120 3300005337 Bacteria 1412
10 Ga0068868_100221910 3300005338 Unclassified 1583
11 Ga0068868_100256724 3300005338 Bacteria 1473
12 Ga0070660_100014476 3300005339 Bacteria 5683
13 Ga0070691_10050462 3300005341 Bacteria 1985
14 Ga0070661_100007595 3300005344 Bacteria 7478
15 Ga0070661_100039029 3300005344 Bacteria 3458
16 Ga0070671_100042062 3300005355 Bacteria 3798
17 Ga0070667_100004429 3300005367 Bacteria 11851
18 Ga0070713_100484727 3300005436 Unclassified 1165
19 Ga0070701_10150071 3300005438 Bacteria 1341
20 Ga0070711_100186189 3300005439 Bacteria 1592
21 Ga0070694_100093561 3300005444 Bacteria 2113
22 Ga0070678_100056450 3300005456 Bacteria 2872
23 Ga0070681_10002459 3300005458 Bacteria 16970
24 Ga0070681_10020492 3300005458 Bacteria 6627
25 Ga0070681_10047798 3300005458 Bacteria 4277
26 Ga0070681_10077577 3300005458 Bacteria 3279
27 Ga0070681_10123686 3300005458 Bacteria 2519
28 Ga0070681_10352676 3300005458 Bacteria 1381
29 Ga0070679_100019206 3300005530 Bacteria 6643
30 Ga0070679_100024678 3300005530 Bacteria 5892
31 Ga0070679_100042337 3300005530 Bacteria 4534
32 Ga0070679_100044058 3300005530 Bacteria 4444
33 Ga0070679_100198318 3300005530 Bacteria 1974
34 Ga0070684_100047274 3300005535 Bacteria 3729
35 Ga0070684_100413110 3300005535 Bacteria 1245
36 Ga0068853_100032572 3300005539 Bacteria 4416
37 Ga0068853_100091557 3300005539 Bacteria 2674
38 Ga0070686_100287771 3300005544 Bacteria 1214
39 Ga0070665_100370217 3300005548 Bacteria 1439
40 Ga0068855_100028415 3300005563 Bacteria 6690
41 Ga0068855_100273811 3300005563 Bacteria 1876
42 Ga0068855_100295250 3300005563 Bacteria 1796
43 Ga0068855_100305125 3300005563 Bacteria 1762
44 Ga0068855_100448735 3300005563 Bacteria 1408
45 Ga0068855_100637467 3300005563 Bacteria 1146
46 Ga0068857_100059402 3300005577 Bacteria 3396
47 Ga0068856_100140439 3300005614 Bacteria 2423
48 Ga0068856_100222111 3300005614 Bacteria 1904
49 Ga0068858_100285493 3300005842 Bacteria 1572
50 Ga0081455_10020385 3300005937 Bacteria 6243
51 Ga0081538_10000451 3300005981 Bacteria 46242
52 Ga0081539_10011238 3300005985 Bacteria 7118
53 Ga0070712_100024357 3300006175 Bacteria 4010
54 Ga0070712_100540428 3300006175 Bacteria 981
55 Ga0075362_10136863 3300006177 Bacteria 1168
56 Ga0075430_100051474 3300006846 Bacteria 3470
57 Ga0075434_100010563 3300006871 Bacteria 8663
58 Ga0075429_100144743 3300006880 Bacteria 2080
59 Ga0075435_100010976 3300007076 Bacteria 6641
60 Ga0105240_10252421 3300009093 Bacteria 2039
61 Ga0105245_10088942 3300009098 Bacteria 2838
62 Ga0114129_10144554 3300009147 Bacteria 3258
63 Ga0105241_10129568 3300009174 Bacteria 2041
64 Ga0105242_10215982 3300009176 Bacteria 1711
65 Ga0105248_10633267 3300009177 Bacteria 1207
66 Ga0105237_10085106 3300009545 Bacteria 3151
67 Ga0105238_10036839 3300009551 Bacteria 4974
68 Ga0105238_10065138 3300009551 Bacteria 3645
69 Ga0105239_10414917 3300010375 Bacteria 1525
70 Ga0157370_10062246 3300013104 Bacteria 3539
71 Ga0157369_10028469 3300013105 Bacteria 6184
72 Ga0157369_10138607 3300013105 Bacteria 2574
73 Ga0157369_10254057 3300013105 Bacteria 1834
74 Ga0157372_10239793 3300013307 Bacteria 2104
75 Ga0157372_10253706 3300013307 Bacteria 2042
76 Ga0157372_10355121 3300013307 Bacteria 1708
77 Ga0206356_11756179 3300020070 Bacteria 2669
78 Ga0206353_10439926 3300020082 Bacteria 2450
79 Ga0206353_10658213 3300020082 Bacteria 16610
80 Ga0206353_11554810 3300020082 Bacteria 979
81 Ga0213876_10022129 3300021384 Bacteria 3363
82 Ga0207654_10032853 3300025911 Bacteria 2871
83 Ga0207707_10015058 3300025912 Bacteria 6733
84 Ga0207707_10132867 3300025912 Bacteria 2176
85 Ga0207695_10243814 3300025913 Bacteria 1698
86 Ga0207693_10049594 3300025915 Bacteria 3297
87 Ga0207660_10118406 3300025917 Bacteria 2003
88 Ga0207660_10228335 3300025917 Bacteria 1463
89 Ga0207657_10003645 3300025919 Bacteria 16400
90 Ga0207657_10007229 3300025919 Bacteria 11404
91 Ga0207657_10077567 3300025919 Bacteria 2799
92 Ga0207657_10245032 3300025919 Bacteria 1430
93 Ga0207657_10363536 3300025919 Bacteria 1140
94 Ga0207649_10035075 3300025920 Bacteria 3012
95 Ga0207649_10125620 3300025920 Bacteria 1735
96 Ga0207652_10074839 3300025921 Bacteria 2949
97 Ga0207652_10100709 3300025921 Bacteria 2551
98 Ga0207652_10101358 3300025921 Bacteria 2543
99 Ga0207652_10156039 3300025921 Bacteria 2045
100 Ga0207646_10604335 3300025922 Unclassified 984
101 Ga0207687_10176113 3300025927 Bacteria 1653
102 Ga0207700_10321196 3300025928 Unclassified 1342
103 Ga0207700_10396069 3300025928 Bacteria 1209
104 Ga0207644_10101260 3300025931 Bacteria 2164
105 Ga0207686_10057346 3300025934 Bacteria 2452
106 Ga0207661_10025455 3300025944 Bacteria 4498
107 Ga0207661_10312579 3300025944 Bacteria 1411
108 Ga0207667_10123448 3300025949 Bacteria 2668
109 Ga0207667_10237155 3300025949 Bacteria 1867
110 Ga0207667_10347804 3300025949 Bacteria 1512
111 Ga0207668_10158511 3300025972 Unclassified 1761
112 Ga0207640_10284511 3300025981 Bacteria 1300
113 Ga0207658_10012239 3300025986 Bacteria 5856
114 Ga0207677_10221739 3300026023 Bacteria 1517
115 Ga0207703_10217050 3300026035 Bacteria 1708
116 Ga0207639_10094103 3300026041 Bacteria 2405
117 Ga0207639_10230116 3300026041 Bacteria 1606
118 Ga0207702_10081153 3300026078 Bacteria 2816
119 Ga0207674_10025387 3300026116 Bacteria 6319
120 Ga0207674_10225381 3300026116 Bacteria 1823
121 Ga0207683_10052372 3300026121 Bacteria 3576
122 Ga0207683_10407768 3300026121 Bacteria 1251
123 Ga0207698_10049957 3300026142 Bacteria 3187
124 Ga0207428_10434444 3300027907 Bacteria 958
125 Ga0268266_10749267 3300028379 Bacteria 942
126 Ga0265319_1026287 3300028563 Bacteria 2076
127 Ga0265334_10090109 3300028573 Bacteria 1120
128 Ga0265322_10002985 3300028654 Bacteria 5148
129 Ga0265320_10046483 3300031240 Bacteria 2127
130 Ga0265325_10017115 3300031241 Bacteria 4034
131 Ga0265329_10041217 3300031242 Bacteria 1481
132 Ga0265340_10060723 3300031247 Bacteria 1810
133 Ga0265316_10005998 3300031344 Bacteria 11687
134 Ga0265313_10002071 3300031595 Bacteria 17952
135 Ga0265314_10001092 3300031711 Bacteria 31362
136 Ga0265314_10116930 3300031711 Bacteria 1685
137 Ga0307415_100083199 3300032126 Bacteria 2292
138 Ga0373926_0024334 3300035083 Bacteria 2108
139 Ga0373936_0051068 3300035113 Bacteria 1673
140 Ga0373953_0058042 3300035117 Bacteria 1577
141 Ga0373943_0007699 3300035170 Bacteria 4838
142 Ga0373946_0014515 3300035171 Bacteria 2972
143 Ga0373955_0044255 3300035172 Bacteria 2397
144 Ga0373924_0090049 3300035410 Bacteria 1312
145 Ga0373935_0115536 3300035692 Bacteria 1786
146 Ga0373935_0402131 3300035692 Bacteria 984
147 Ga0373947_0003592 3300035725 Bacteria 9146
148 Ga0373937_0227430 3300036401 Bacteria 1756
149 Ga0373925_0019137 3300037068 Bacteria 4978
150 Ga0395899_0059158 3300037312 Bacteria 2824
151 Ga0395900_0009227 3300037418 Bacteria 10115
152 Ga0395900_0034544 3300037418 Bacteria 5208
153 Ga0395900_0152124 3300037418 Bacteria 2364
154 Ga0395900_0162070 3300037418 Bacteria 2280
155 Ga0395900_0283492 3300037418 Bacteria 1648
156 Ga0395900_0286851 3300037418 Bacteria 1636
157 Ga0395900_0705701 3300037418 Bacteria 942
158 Ga0395898_0008224 3300037466 Bacteria 11032
159 Ga0395898_0076826 3300037466 Bacteria 3224
160 Ga0395898_0081599 3300037466 Bacteria 3117
161 Ga0395898_0767228 3300037466 Bacteria 905
162 Ga0395905_0007022 3300037471 Bacteria 11255
163 Ga0395905_0852342 3300037471 Bacteria 814
164 Ga0436364_0106452 3300037853 Bacteria 1953
165 Ga0395901_0064496 3300038443 Bacteria 3813
166 Ga0395901_0296692 3300038443 Bacteria 1676
167 Ga0436365_0382921 3300039437 Bacteria 2941
168 Ga0466965_0060026 3300044683 Bacteria 1899
169 Ga0466965_0091870 3300044683 Bacteria 1545
170 Ga0466966_0001372 3300044684 Bacteria 15654
171 Ga0466966_0007521 3300044684 Bacteria 7216
172 Ga0466966_0035561 3300044684 Bacteria 3217
173 Ga0466963_0016645 3300044694 Bacteria 4574
174 Ga0466963_0017731 3300044694 Bacteria 4440
175 Ga0466963_0307869 3300044694 Bacteria 1114
176 Ga0466963_0369789 3300044694 Bacteria 1010
177 Ga0466964_0003533 3300044706 Bacteria 5712
178 Ga0466964_0021167 3300044706 Bacteria 2513
179 Ga0466968_0003176 3300044735 Bacteria 6060
180 Ga0466960_0105040 3300044901 Bacteria 1459
181 Ga0466959_0025882 3300045049 Bacteria 4351
182 Ga0466959_0139071 3300045049 Bacteria 1717
183 Ga0451576_0504477 3300045051 Bacteria 1271
184 Ga0466958_0020822 3300045836 Bacteria 3827
185 Ga0466967_0021866 3300045976 Bacteria 5205
186 Ga0466967_0044987 3300045976 Bacteria 3833
187 Ga0466967_0083219 3300045976 Bacteria 2893
188 Ga0466967_0098430 3300045976 Bacteria 2671
189 Ga0466967_0150388 3300045976 Bacteria 2175
190 Ga0466967_0203525 3300045976 Bacteria 1875
191 Ga0466967_0219499 3300045976 Bacteria 1806
192 Ga0466967_0300718 3300045976 Bacteria 1544
193 Ga0466967_0540005 3300045976 Bacteria 1147
194 Ga0495592_0037472 3300046454 Bacteria 3651
195 Ga0495629_0297136 3300046459 Bacteria 1106
196 Ga0495641_0022887 3300046461 Bacteria 3117
197 Ga0495651_0002540 3300046462 Bacteria 14126
198 Ga0495651_0053389 3300046462 Bacteria 3111
199 Ga0495653_0117688 3300046463 Bacteria 1898
200 Ga0495653_0143532 3300046463 Bacteria 1676
201 Ga0495582_0450201 3300046473 Bacteria 743
202 Ga0495664_0048169 3300046477 Bacteria 2530
203 Ga0495664_0105936 3300046477 Bacteria 1695
204 Ga0495608_0002668 3300046511 Bacteria 12806
205 Ga0495618_0073831 3300046514 Bacteria 2172
206 Ga0495628_0027540 3300046516 Bacteria 4623
207 Ga0495628_0055047 3300046516 Bacteria 3134
208 Ga0495630_0006826 3300046517 Bacteria 8139
209 Ga0495630_0029117 3300046517 Bacteria 4105
210 Ga0495666_0190853 3300046526 Bacteria 944
211 Ga0495652_0090964 3300046529 Bacteria 2495
212 Ga0495652_0115727 3300046529 Bacteria 2148
213 Ga0495652_0461361 3300046529 Bacteria 887
214 Ga0495640_0006448 3300046533 Bacteria 9277
215 Ga0495587_0119786 3300046536 Bacteria 1508
216 Ga0495645_0199572 3300046543 Bacteria 1358
217 Ga0495667_0001367 3300046559 Bacteria 16035
218 Ga0495667_0077216 3300046559 Bacteria 2166
219 Ga0495634_0102834 3300046642 Bacteria 1845
220 Ga0495635_0150231 3300046663 Bacteria 1586
221 Ga0495657_0016441 3300046675 Bacteria 5393
222 Ga0495657_0073687 3300046675 Bacteria 2223
223 Ga0495599_0044548 3300046678 Bacteria 2783
224 Ga0495646_0040017 3300046680 Bacteria 2889
225 Ga0495658_0004361 3300046683 Bacteria 6966
226 Ga0495613_0106301 3300046689 Bacteria 2025
227 Ga0495613_0107161 3300046689 Bacteria 2016
228 Ga0495604_0045671 3300047317 Bacteria 3418
229 Ga0495604_0083426 3300047317 Bacteria 2388
230 Ga0495674_0008172 3300047319 Bacteria 9984
231 Ga0495680_0017874 3300047322 Bacteria 6035
232 Ga0495680_0088469 3300047322 Bacteria 2327
233 Ga0495684_0013122 3300047471 Bacteria 6394
234 Ga0495684_0016457 3300047471 Bacteria 5695
235 Ga0495593_0171395 3300047673 Bacteria 1094
236 Ga0495602_0253996 3300048088 Bacteria 1308
237 Ga0496100_0021612 3300048903 Bacteria 3879
238 Ga0496100_0027788 3300048903 Bacteria 3482
239 Ga0496100_0115588 3300048903 Bacteria 1871
240 Ga0496101_0007962 3300048904 Bacteria 6904
241 Ga0496101_0015398 3300048904 Bacteria 5152
242 Ga0496101_0061049 3300048904 Bacteria 2736
243 Ga0496101_0207437 3300048904 Bacteria 1517
244 Ga0496102_0018969 3300048905 Bacteria 6051
245 Ga0496102_0025166 3300048905 Bacteria 5295
246 Ga0496103_0046476 3300048906 Bacteria 2680
247 Ga0496104_0011540 3300048907 Bacteria 7916
248 Ga0496105_0022596 3300048908 Bacteria 5094
249 Ga0496106_0012412 3300048909 Bacteria 6290
250 Ga0496106_0016416 3300048909 Bacteria 5479
251 Ga0496106_0174225 3300048909 Bacteria 1706
252 Ga0496106_0529687 3300048909 Bacteria 946
253 Ga0496107_0006150 3300048910 Bacteria 8245
254 Ga0496107_0007289 3300048910 Bacteria 7622
255 Ga0496107_0011921 3300048910 Bacteria 6070
256 Ga0496108_0018588 3300048911 Bacteria 5693
257 Ga0496109_0019053 3300048912 Bacteria 6044
258 Ga0496110_0071951 3300048913 Bacteria 3067
259 Ga0496111_0015705 3300048914 Bacteria 5205
260 Ga0496112_0009482 3300048915 Bacteria 8776
261 Ga0496112_0017023 3300048915 Bacteria 6824
262 Ga0496112_0275051 3300048915 Bacteria 1632
263 Ga0496113_0097971 3300048916 Bacteria 2269
264 Ga0496114_0002002 3300048917 Bacteria 15493
265 Ga0496114_0003734 3300048917 Bacteria 11729
266 Ga0496115_0010879 3300048918 Bacteria 6811
267 Ga0501031_0002272 3300049568 Bacteria 12172
268 Ga0501031_0385356 3300049568 Bacteria 907
269 Ga0501032_0005233 3300049569 Bacteria 9656
270 Ga0501033_0005402 3300049570 Bacteria 10126
271 Ga0501034_0078776 3300049571 Bacteria 3299
272 Ga0501034_0357835 3300049571 Bacteria 1387
273 Ga0501036_0011864 3300049572 Bacteria 7221
274 Ga0501037_0004417 3300049573 Bacteria 10215
275 Ga0501038_0015251 3300049574 Bacteria 6986
276 Ga0501039_0005718 3300049575 Bacteria 9420
277 Ga0501040_0003310 3300049576 Bacteria 10419
278 Ga0501041_0015025 3300049577 Bacteria 4598
279 Ga0501042_0004796 3300049578 Bacteria 8640
280 Ga0501043_0002580 3300049579 Bacteria 15322
281 Ga0501046_0001797 3300049580 Bacteria 20463
282 Ga0501047_0009225 3300049581 Bacteria 9314
283 Ga0501047_0078047 3300049581 Bacteria 3185
284 Ga0501047_0090439 3300049581 Bacteria 2938
285 Ga0501048_0018914 3300049582 Bacteria 5062
286 Ga0501067_0027314 3300049583 Bacteria 3162
287 Ga0501067_0120974 3300049583 Bacteria 1457
288 Ga0501068_0000424 3300049584 Bacteria 21395
289 Ga0501068_0097844 3300049584 Bacteria 1816
290 Ga0501069_0003485 3300049585 Bacteria 8103
291 Ga0501069_0009583 3300049585 Bacteria 5112
292 Ga0501070_0020741 3300049586 Bacteria 5512
293 Ga0501070_0065527 3300049586 Bacteria 3008
294 Ga0501070_0325610 3300049586 Bacteria 1249
295 Ga0501071_0003943 3300049587 Bacteria 9360
296 Ga0501072_0032167 3300049588 Bacteria 4108
297 Ga0501073_0005730 3300049589 Bacteria 9292
298 Ga0501074_0003324 3300049590 Bacteria 11384
299 Ga0501075_0048208 3300049591 Bacteria 3201
300 Ga0501076_0094329 3300049592 Bacteria 2409
301 Ga0501079_0010270 3300049741 Bacteria 7110
302 Ga0501079_0363902 3300049741 Bacteria 1134
303 Ga0501080_0003912 3300049742 Bacteria 13191
304 Ga0501081_0010864 3300049743 Bacteria 5950
305 Ga0501083_0007278 3300049744 Bacteria 7855
306 Ga0501035_0010189 3300049822 Bacteria 8724
307 Ga0501044_0039731 3300049823 Bacteria 4906
308 Ga0501045_0029837 3300049824 Bacteria 3943
309 nmdc:mga03683_108147_c1 3300050489 Bacteria 1227
310 nmdc:mga0yw44_339058_c1 3300050492 Bacteria 1011
311 nmdc:mga0k408_233723_c1 3300050493 Bacteria 1097
312 nmdc:mga05p37_391734_c1 3300050507 Bacteria 1625
313 nmdc:mga05p37_40077_c1 3300050507 Bacteria 5752
314 nmdc:mga05p37_567822_c1 3300050507 Bacteria 1288
315 nmdc:mga06r32_138454_c1 3300050510 Bacteria 2409
316 nmdc:mga08y16_54413_c1 3300050511 Bacteria 4182
317 nmdc:mga08y16_791573_c1 3300050511 Bacteria 942
318 nmdc:mga0n895_181058_c1 3300050512 Bacteria 2139
319 nmdc:mga0rr50_47752_c1 3300050513 Bacteria 3161
320 nmdc:mga0a205_420250_c1 3300050515 Bacteria 1199
321 Ga0495612_0014666 3300053078 Bacteria 3149
322 Ga0495612_0037229 3300053078 Bacteria 1976
323 Ga0495655_0001179 3300053083 Bacteria 4035
324 Ga0495595_0038205 3300053084 Bacteria 2186
325 Ga0501084_0017811 3300054114 Bacteria 5911
326 Ga0501082_0465717 3300060353 Bacteria 1104
327 Ga0466962_0005550 3300061719 Bacteria 6055
328 Ga0530510_0062216 3300061734 Bacteria 2702
329 Ga0070717_10100533
330 JGI25407J50210_10003635
331 Ga0070658_10054529
332 Ga0070658_10409766
333 Ga0070683_100044379
334 Ga0070670_100016766
335 Ga0070680_100065090
336 Ga0070680_100166305
337 Ga0070682_100199120
338 Ga0068868_100221910
339 Ga0068868_100256724
340 Ga0070660_100014476
341 Ga0070691_10050462
342 Ga0070661_100007595
343 Ga0070661_100039029
344 Ga0070671_100042062
345 Ga0070667_100004429
346 Ga0070713_100484727
347 Ga0070701_10150071
348 Ga0070711_100186189
349 Ga0070694_100093561
350 Ga0070678_100056450
351 Ga0070681_10002459
352 Ga0070681_10020492
353 Ga0070681_10047798
354 Ga0070681_10077577
355 Ga0070681_10123686
356 Ga0070681_10352676
357 Ga0070679_100019206
358 Ga0070679_100024678
359 Ga0070679_100042337
360 Ga0070679_100044058
361 Ga0070679_100198318
362 Ga0070684_100047274
363 Ga0070684_100413110
364 Ga0068853_100032572
365 Ga0068853_100091557
366 Ga0070686_100287771
367 Ga0070665_100370217
368 Ga0068855_100028415
369 Ga0068855_100273811
370 Ga0068855_100295250
371 Ga0068855_100305125
372 Ga0068855_100448735
373 Ga0068855_100637467
374 Ga0068857_100059402
375 Ga0068856_100140439
376 Ga0068856_100222111
377 Ga0068858_100285493
378 Ga0081455_10020385
379 Ga0081538_10000451
380 Ga0081539_10011238
381 Ga0070712_100024357
382 Ga0070712_100540428
383 Ga0075362_10136863
384 Ga0075430_100051474
385 Ga0075434_100010563
386 Ga0075429_100144743
387 Ga0075435_100010976
388 Ga0105240_10252421
389 Ga0105245_10088942
390 Ga0114129_10144554
391 Ga0105241_10129568
392 Ga0105242_10215982
393 Ga0105248_10633267
394 Ga0105237_10085106
395 Ga0105238_10036839
396 Ga0105238_10065138
397 Ga0105239_10414917
398 Ga0157370_10062246
399 Ga0157369_10028469
400 Ga0157369_10138607
401 Ga0157369_10254057
402 Ga0157372_10239793
403 Ga0157372_10253706
404 Ga0157372_10355121
405 Ga0206356_11756179
406 Ga0206353_10439926
407 Ga0206353_10658213
408 Ga0206353_11554810
409 Ga0213876_10022129
410 Ga0207654_10032853
411 Ga0207707_10015058
412 Ga0207707_10132867
413 Ga0207695_10243814
414 Ga0207693_10049594
415 Ga0207660_10118406
416 Ga0207660_10228335
417 Ga0207657_10003645
418 Ga0207657_10007229
419 Ga0207657_10077567
420 Ga0207657_10245032
421 Ga0207657_10363536
422 Ga0207649_10035075
423 Ga0207649_10125620
424 Ga0207652_10074839
425 Ga0207652_10100709
426 Ga0207652_10101358
427 Ga0207652_10156039
428 Ga0207646_10604335
429 Ga0207687_10176113
430 Ga0207700_10321196
431 Ga0207700_10396069
432 Ga0207644_10101260
433 Ga0207686_10057346
434 Ga0207661_10025455
435 Ga0207661_10312579
436 Ga0207667_10123448
437 Ga0207667_10237155
438 Ga0207667_10347804
439 Ga0207668_10158511
440 Ga0207640_10284511
441 Ga0207658_10012239
442 Ga0207677_10221739
443 Ga0207703_10217050
444 Ga0207639_10094103
445 Ga0207639_10230116
446 Ga0207702_10081153
447 Ga0207674_10025387
448 Ga0207674_10225381
449 Ga0207683_10052372
450 Ga0207683_10407768
451 Ga0207698_10049957
452 Ga0207428_10434444
453 Ga0268266_10749267
454 Ga0265319_1026287
455 Ga0265334_10090109
456 Ga0265322_10002985
457 Ga0265320_10046483
458 Ga0265325_10017115
459 Ga0265329_10041217
460 Ga0265340_10060723
461 Ga0265316_10005998
462 Ga0265313_10002071
463 Ga0265314_10001092
464 Ga0265314_10116930
465 Ga0307415_100083199
466 Ga0373926_0024334
467 Ga0373936_0051068
468 Ga0373953_0058042
469 Ga0373943_0007699
470 Ga0373946_0014515
471 Ga0373955_0044255
472 Ga0373924_0090049
473 Ga0373935_0115536
474 Ga0373935_0402131
475 Ga0373947_0003592
476 Ga0373937_0227430
477 Ga0373925_0019137
478 Ga0395899_0059158
479 Ga0395900_0009227
480 Ga0395900_0034544
481 Ga0395900_0152124
482 Ga0395900_0162070
483 Ga0395900_0283492
484 Ga0395900_0286851
485 Ga0395900_0705701
486 Ga0395898_0008224
487 Ga0395898_0076826
488 Ga0395898_0081599
489 Ga0395898_0767228
490 Ga0395905_0007022
491 Ga0395905_0852342
492 Ga0436364_0106452
493 Ga0395901_0064496
494 Ga0395901_0296692
495 Ga0436365_0382921
496 Ga0466965_0060026
497 Ga0466965_0091870
498 Ga0466966_0001372
499 Ga0466966_0007521
500 Ga0466966_0035561
501 Ga0466963_0016645
502 Ga0466963_0017731
503 Ga0466963_0307869
504 Ga0466963_0369789
505 Ga0466964_0003533
506 Ga0466964_0021167
507 Ga0466968_0003176
508 Ga0466960_0105040
509 Ga0466959_0025882
510 Ga0466959_0139071
511 Ga0451576_0504477
512 Ga0466958_0020822
513 Ga0466967_0021866
514 Ga0466967_0044987
515 Ga0466967_0083219
516 Ga0466967_0098430
517 Ga0466967_0150388
518 Ga0466967_0203525
519 Ga0466967_0219499
520 Ga0466967_0300718
521 Ga0466967_0540005
522 Ga0495592_0037472
523 Ga0495629_0297136
524 Ga0495641_0022887
525 Ga0495651_0002540
526 Ga0495651_0053389
527 Ga0495653_0117688
528 Ga0495653_0143532
529 Ga0495582_0450201
530 Ga0495664_0048169
531 Ga0495664_0105936
532 Ga0495608_0002668
533 Ga0495618_0073831
534 Ga0495628_0027540
535 Ga0495628_0055047
536 Ga0495630_0006826
537 Ga0495630_0029117
538 Ga0495666_0190853
539 Ga0495652_0090964
540 Ga0495652_0115727
541 Ga0495652_0461361
542 Ga0495640_0006448
543 Ga0495587_0119786
544 Ga0495645_0199572
545 Ga0495667_0001367
546 Ga0495667_0077216
547 Ga0495634_0102834
548 Ga0495635_0150231
549 Ga0495657_0016441
550 Ga0495657_0073687
551 Ga0495599_0044548
552 Ga0495646_0040017
553 Ga0495658_0004361
554 Ga0495613_0106301
555 Ga0495613_0107161
556 Ga0495604_0045671
557 Ga0495604_0083426
558 Ga0495674_0008172
559 Ga0495680_0017874
560 Ga0495680_0088469
561 Ga0495684_0013122
562 Ga0495684_0016457
563 Ga0495593_0171395
564 Ga0495602_0253996
565 Ga0496100_0021612
566 Ga0496100_0027788
567 Ga0496100_0115588
568 Ga0496101_0007962
569 Ga0496101_0015398
570 Ga0496101_0061049
571 Ga0496101_0207437
572 Ga0496102_0018969
573 Ga0496102_0025166
574 Ga0496103_0046476
575 Ga0496104_0011540
576 Ga0496105_0022596
577 Ga0496106_0012412
578 Ga0496106_0016416
579 Ga0496106_0174225
580 Ga0496106_0529687
581 Ga0496107_0006150
582 Ga0496107_0007289
583 Ga0496107_0011921
584 Ga0496108_0018588
585 Ga0496109_0019053
586 Ga0496110_0071951
587 Ga0496111_0015705
588 Ga0496112_0009482
589 Ga0496112_0017023
590 Ga0496112_0275051
591 Ga0496113_0097971
592 Ga0496114_0002002
593 Ga0496114_0003734
594 Ga0496115_0010879
595 Ga0501031_0002272
596 Ga0501031_0385356
597 Ga0501032_0005233
598 Ga0501033_0005402
599 Ga0501034_0078776
600 Ga0501034_0357835
601 Ga0501036_0011864
602 Ga0501037_0004417
603 Ga0501038_0015251
604 Ga0501039_0005718
605 Ga0501040_0003310
606 Ga0501041_0015025
607 Ga0501042_0004796
608 Ga0501043_0002580
609 Ga0501046_0001797
610 Ga0501047_0009225
611 Ga0501047_0078047
612 Ga0501047_0090439
613 Ga0501048_0018914
614 Ga0501067_0027314
615 Ga0501067_0120974
616 Ga0501068_0000424
617 Ga0501068_0097844
618 Ga0501069_0003485
619 Ga0501069_0009583
620 Ga0501070_0020741
621 Ga0501070_0065527
622 Ga0501070_0325610
623 Ga0501071_0003943
624 Ga0501072_0032167
625 Ga0501073_0005730
626 Ga0501074_0003324
627 Ga0501075_0048208
628 Ga0501076_0094329
629 Ga0501079_0010270
630 Ga0501079_0363902
631 Ga0501080_0003912
632 Ga0501081_0010864
633 Ga0501083_0007278
634 Ga0501035_0010189
635 Ga0501044_0039731
636 Ga0501045_0029837
637 nmdc:mga03683_108147_c1
638 nmdc:mga0yw44_339058_c1
639 nmdc:mga0k408_233723_c1
640 nmdc:mga05p37_391734_c1
641 nmdc:mga05p37_40077_c1
642 nmdc:mga05p37_567822_c1
643 nmdc:mga06r32_138454_c1
644 nmdc:mga08y16_54413_c1
645 nmdc:mga08y16_791573_c1
646 nmdc:mga0n895_181058_c1
647 nmdc:mga0rr50_47752_c1
648 nmdc:mga0a205_420250_c1
649 Ga0495612_0014666
650 Ga0495612_0037229
651 Ga0495655_0001179
652 Ga0495595_0038205
653 Ga0501084_0017811
654 Ga0501082_0465717
655 Ga0466962_0005550
656 Ga0530510_0062216

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00348

polyprenyl_synt

Polyprenyl synthetase

34

231

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6kd7-assembly1.cif.gz_A crystal structure of geranylgeranyl pyrophosphate synthase 0.9162 1 207
7lbj-assembly1.cif.gz_B crystal structure of octaprenyl diphosphate synthase from stenotrophomonas maltophilia 0.9004 5 230
1rtr-assembly1.cif.gz_A crystal structure of s. aureus farnesyl pyrophosphate synthase 0.8949 1 230
3wjo-assembly1.cif.gz_A crystal structure of octaprenyl pyrophosphate synthase from escherichia coli with isopentenyl pyrophosphate (ipp) 0.8934 5 207
3wjn-assembly1.cif.gz_A crystal structure of octaprenyl pyrophosphate synthase from escherichia coli with farnesyl s-thiol-pyrophosphate (fspp) 0.8918 4 207
ID Description Score Start End Superfamily
af_A4HWK0_18_358_1.10.600.10 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8988 6 207 1.10.600.10
1rtrA00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8949 1 230 1.10.600.10
1rtrA00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8804 1 230 1.10.600.10
4wk5A00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8794 6 230 1.10.600.10
1wy0A00 Mainly Alpha;Orthogonal Bundle;Farnesyl Diphosphate Synthase;Farnesyl Diphosphate Synthase 0.8737 4 207 1.10.600.10
ID Description Score Start End GO Terms
AF-A0A538AMP3-F1-model_v4 Polyprenyl synthetase family protein 0.9781 1 227 GO:0004659
GO:0008299
AF-A0A538GAU8-F1-model_v4 Polyprenyl synthetase family protein 0.975 1 204 GO:0004659
GO:0008299
AF-A0A538GAU8-F1-model_v4 Polyprenyl synthetase family protein 0.9703 1 204 GO:0004659
GO:0008299
AF-A0A7V9L0H7-F1-model_v4 Polyprenyl synthetase family protein 0.9584 1 227 GO:0004659
GO:0008299
AF-A0A538AMP3-F1-model_v4 Polyprenyl synthetase family protein 0.941 1 227 GO:0004659
GO:0008299

Map