F409029

General Info

Members Datasets Scaffolds Average Seq Length
327 241 654 590

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006321560|3006323108
Length 619
Sequence TAIPAASPGSASAPAPAPAAGPAAAPPPVPSVVAVIGLGTMGTGIAEVMARAGHEVIGVDVDATAARRAVTALDRSTARAVQRGRCTPEERADALARFRTFPDLRAAAAADLVIEVVDERYAVKRDVITALDRLVRPEAILATGTNALSVTRLAAETARPDRVLGLHFFAPAPAMKLVEVVSTVLTSPQATAAVTALVRSLGKEPVPVGDRPGFIADGLLFGYLNQAAAMYESRYATREDIDAAMRLGCGLPMGPLALLDLIGVDTATTVLDAMYEATRDRLHSPAPVLRQLTAAGLLGRKSGRGFYRYEAPGSPVVVPDAPAPREEGGGRPAGRTVTTVGVAGSGTMAAGIAEVFAKAGYPVRLAARSPEKAERAVARVVASLDRSVVKGRLDEGQRDAAVALLAPAASYDELAAADLVVEAVAEDLFVKQELFRVLDKVCRPGAVLATTTSSLPVVAIARATGRPQDVVGMHFFNPAPAMKLVEVVHTVLTADDVVATVHEVCGQVRKHPVDCGDRAGFIVNALLFPYLNNAVKMVQDHYASVDAIDAAMKLGGGYPMGPFELLDVVGLDVSLAIEQVLHEEFRDPGLAPAPLLEHLVSAGCLGRKTGRGFREYAGA

Samples

Sample ID Description Type Environment
1 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
6 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
7 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
8 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
9 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
10 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
11 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
12 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
13 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
14 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
15 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
16 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
17 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
18 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
19 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
20 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
23 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
25 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
26 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
27 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
28 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
29 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
30 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
31 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
32 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
33 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
34 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
35 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
36 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
37 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
38 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
39 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
40 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
41 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
42 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
43 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
44 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
45 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
46 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
47 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
48 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
49 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
50 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
51 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
52 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
53 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
54 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
55 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
56 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
57 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
58 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
59 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
60 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
61 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
62 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
63 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
64 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
65 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
66 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
67 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
68 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
69 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
70 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
71 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
72 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
73 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
74 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
75 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
79 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
80 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
81 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
82 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
83 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
84 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
85 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
86 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
87 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
88 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
89 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
90 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
91 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
92 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
93 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
96 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
97 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
98 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
99 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
100 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
101 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
102 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
103 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
104 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
105 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
106 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
107 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
108 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
109 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
110 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
111 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
112 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
113 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
115 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
118 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
123 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
127 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
128 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
129 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
130 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
131 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
132 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
135 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
136 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
137 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
138 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
139 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
140 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
141 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
142 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
143 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
144 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
147 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
148 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
151 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
152 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
153 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
154 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
155 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
156 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
157 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
158 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
159 2643221548 Streptomyces sp. Root55 Isolate Unclassified
160 2643221578 Streptomyces sp. Root63 Isolate Unclassified
161 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
162 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
163 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
164 2643221647 Streptomyces sp. Root369 Isolate Unclassified
165 2643221670 Streptomyces sp. Root431 Isolate Unclassified
166 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
167 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
168 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
169 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
170 2643221714 Streptomyces sp. Root264 Isolate Unclassified
171 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
172 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
173 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
174 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
175 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
176 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
177 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
178 2808606448 Streptomyces sp. 193411 Isolate Unclassified
179 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
180 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
181 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
182 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
183 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
184 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
185 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
186 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
187 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
188 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
189 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
190 2862574272 Streptomyces sp. AcE210 Isolate Nodule
191 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
192 2867369537 Streptomyces sp. Z26 Isolate Unclassified
193 2867428634 Streptomyces sp. RP5T Isolate Unclassified
194 2867475112 Streptomyces sp. TM32 Isolate Unclassified
195 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
196 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
197 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
198 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
199 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
200 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
201 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
202 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
203 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
204 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
205 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
206 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
207 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
208 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
209 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
210 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
211 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
212 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
213 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
214 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
215 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
216 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
217 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
218 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
219 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
220 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
221 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
222 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
223 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
224 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
225 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
226 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
227 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
228 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
229 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
230 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
231 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
232 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
233 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
234 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
235 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
236 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
237 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
238 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
239 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
240 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
241 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.56
Metatranscriptomes 0.61
Isolates 27.83

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.81
Nodule 0.92
Rhizoplane 0.31
Rhizosphere 74.92
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10008394 3300001989 Bacteria 3857
2 rootH1_10004752 3300003323 Bacteria 6757
3 Ga0070714_100000106 3300005435 Bacteria 70067
4 Ga0070714_100015372 3300005435 Bacteria 6159
5 Ga0070700_100000032 3300005441 Bacteria 114995
6 Ga0068853_100073653 3300005539 Bacteria 2978
7 Ga0070665_100059011 3300005548 Bacteria 3846
8 Ga0081455_10000323 3300005937 Bacteria 62637
9 Ga0075365_10030406 3300006038 Bacteria 3459
10 Ga0075368_10009026 3300006042 Bacteria 3578
11 Ga0075367_10004135 3300006178 Bacteria 7037
12 Ga0075370_10026918 3300006353 Bacteria 3188
13 Ga0105238_10140883 3300009551 Bacteria 2388
14 Ga0182008_10001814 3300014497 Bacteria 13910
15 Ga0182007_10000483 3300015262 Bacteria 23980
16 Ga0183367_1001 3300015688 Bacteria 1225545
17 Ga0206353_10140313 3300020082 Bacteria 4497
18 Ga0224712_10020068 3300022467 Bacteria 2263
19 Ga0209758_1009624 3300025297 Bacteria 5960
20 Ga0207426_1002002 3300025302 Bacteria 14402
21 Ga0207664_10000047 3300025929 Bacteria 139122
22 Ga0207708_10000045 3300026075 Bacteria 118159
23 Ga0209813_10013219 3300027866 Bacteria 2200
24 Ga0268266_10086381 3300028379 Bacteria 2743
25 Ga0307517_10000344 3300028786 Bacteria 80274
26 Ga0307517_10002786 3300028786 Bacteria 27793
27 Ga0307515_10000055 3300028794 Bacteria 264365
28 Ga0307515_10055821 3300028794 Bacteria 5759
29 Ga0307511_10000113 3300030521 Bacteria 72975
30 Ga0307511_10051411 3300030521 Bacteria 3305
31 Ga0307512_10004676 3300030522 Bacteria 14832
32 Ga0307513_10099872 3300031456 Bacteria 2929
33 Ga0307509_10006014 3300031507 Bacteria 16564
34 Ga0307509_10037017 3300031507 Bacteria 5336
35 Ga0307509_10151427 3300031507 Bacteria 2234
36 Ga0307508_10021854 3300031616 Bacteria 5821
37 Ga0307508_10109810 3300031616 Bacteria 2357
38 Ga0307514_10045853 3300031649 Bacteria 3417
39 Ga0307516_10043667 3300031730 Bacteria 4440
40 Ga0307507_10000024 3300033179 Bacteria 212340
41 Ga0307507_10014314 3300033179 Bacteria 9479
42 Ga0307510_10069591 3300033180 Bacteria 3523
43 Ga0395898_0003315 3300037466 Bacteria 18079
44 Ga0395898_0008818 3300037466 Bacteria 10625
45 Ga0395901_0030851 3300038443 Bacteria 5524
46 Ga0439436_0000620 3300041404 Bacteria 9411
47 Ga0439436_0001554 3300041404 Bacteria 6686
48 Ga0439433_0002552 3300041999 Bacteria 3866
49 Ga0439449_0015815 3300042007 Bacteria 2836
50 Ga0439455_0004068 3300042012 Bacteria 2863
51 Ga0439457_000551 3300042014 Bacteria 10955
52 Ga0439457_000630 3300042014 Bacteria 10414
53 Ga0450896_003644 3300042133 Bacteria 2058
54 Ga0450903_000703 3300042138 Bacteria 6660
55 Ga0439458_0000748 3300042157 Bacteria 8306
56 Ga0466969_0001309 3300044656 Bacteria 13412
57 Ga0466969_0003283 3300044656 Bacteria 8593
58 Ga0466969_0030239 3300044656 Bacteria 2760
59 Ga0466972_0002204 3300044658 Bacteria 9560
60 Ga0466972_0016800 3300044658 Bacteria 3659
61 Ga0466972_0019880 3300044658 Bacteria 3357
62 Ga0466965_0011503 3300044683 Bacteria 4150
63 Ga0466966_0003392 3300044684 Bacteria 10508
64 Ga0466961_0002104 3300044693 Bacteria 12391
65 Ga0466963_0001025 3300044694 Bacteria 14497
66 Ga0466963_0003114 3300044694 Bacteria 9402
67 Ga0466964_0018400 3300044706 Bacteria 2681
68 Ga0466971_0000360 3300044719 Bacteria 17428
69 Ga0466971_0000463 3300044719 Bacteria 15866
70 Ga0466971_0001585 3300044719 Bacteria 9601
71 Ga0466971_0022483 3300044719 Bacteria 2810
72 Ga0466970_0001172 3300044765 Bacteria 12726
73 Ga0466970_0003693 3300044765 Bacteria 7477
74 Ga0466957_0009135 3300044842 Bacteria 5654
75 Ga0466960_0005265 3300044901 Bacteria 5111
76 Ga0466959_0002190 3300045049 Bacteria 12428
77 Ga0466959_0004284 3300045049 Bacteria 9516
78 Ga0466958_0001825 3300045836 Bacteria 10352
79 Ga0466958_0009093 3300045836 Bacteria 5522
80 Ga0466967_0001598 3300045976 Bacteria 13346
81 Ga0466967_0040745 3300045976 Bacteria 4000
82 Ga0466967_0080056 3300045976 Bacteria 2947
83 Ga0495617_008703 3300046452 Bacteria 3493
84 Ga0495592_0005077 3300046454 Bacteria 9694
85 Ga0495592_0010820 3300046454 Bacteria 6881
86 Ga0495603_0003753 3300046455 Bacteria 9033
87 Ga0495603_0007453 3300046455 Bacteria 6581
88 Ga0495603_0038678 3300046455 Bacteria 2860
89 Ga0495629_0005907 3300046459 Bacteria 9123
90 Ga0495629_0019741 3300046459 Bacteria 4811
91 Ga0495629_0057437 3300046459 Bacteria 2721
92 Ga0495651_0001909 3300046462 Bacteria 16139
93 Ga0495651_0003580 3300046462 Bacteria 11916
94 Ga0495605_0004744 3300046474 Bacteria 7950
95 Ga0495664_0000402 3300046477 Bacteria 21128
96 Ga0495585_0008095 3300046492 Bacteria 6388
97 Ga0495594_0000330 3300046499 Bacteria 23485
98 Ga0495594_0008522 3300046499 Bacteria 5286
99 Ga0495594_0010400 3300046499 Bacteria 4826
100 Ga0495596_0013252 3300046500 Bacteria 3504
101 Ga0495607_0047971 3300046501 Bacteria 2499
102 Ga0495583_0036924 3300046506 Bacteria 2320
103 Ga0495606_0014186 3300046507 Bacteria 6236
104 Ga0495610_0022147 3300046512 Bacteria 3480
105 Ga0495616_0007339 3300046513 Bacteria 6598
106 Ga0495618_0079365 3300046514 Bacteria 2093
107 Ga0495620_0009076 3300046515 Bacteria 5306
108 Ga0495620_0017050 3300046515 Bacteria 3630
109 Ga0495628_0040489 3300046516 Bacteria 3723
110 Ga0495630_0083136 3300046517 Bacteria 2417
111 Ga0495631_0011782 3300046518 Bacteria 4288
112 Ga0495643_0025017 3300046522 Bacteria 3381
113 Ga0495652_0002867 3300046529 Bacteria 17391
114 Ga0495652_0010502 3300046529 Bacteria 8391
115 Ga0495640_0010793 3300046533 Bacteria 7047
116 Ga0495587_0002204 3300046536 Bacteria 13024
117 Ga0495609_0004666 3300046538 Bacteria 7428
118 Ga0495645_0005253 3300046543 Bacteria 8866
119 Ga0495633_0004958 3300046558 Bacteria 8311
120 Ga0495634_0000714 3300046642 Bacteria 32209
121 Ga0495625_0007561 3300046660 Bacteria 9436
122 Ga0495625_0035124 3300046660 Bacteria 3696
123 Ga0495635_0000586 3300046663 Bacteria 23438
124 Ga0495635_0014748 3300046663 Bacteria 5467
125 Ga0495635_0055303 3300046663 Bacteria 2734
126 Ga0495588_0002835 3300046674 Bacteria 7457
127 Ga0495588_0010497 3300046674 Bacteria 4307
128 Ga0495657_0006494 3300046675 Bacteria 9142
129 Ga0495623_0026459 3300046679 Bacteria 3734
130 Ga0495646_0001476 3300046680 Bacteria 13975
131 Ga0495646_0027540 3300046680 Bacteria 3565
132 Ga0495658_0006674 3300046683 Bacteria 5672
133 Ga0495613_0000717 3300046689 Bacteria 25942
134 Ga0495613_0000948 3300046689 Bacteria 22175
135 Ga0495613_0105175 3300046689 Bacteria 2037
136 Ga0495670_0028314 3300046691 Bacteria 2778
137 Ga0495671_0008492 3300046692 Bacteria 5777
138 Ga0495589_0004254 3300046794 Bacteria 7658
139 Ga0495589_0008957 3300046794 Bacteria 5206
140 Ga0495589_0028897 3300046794 Bacteria 2796
141 Ga0495589_0032206 3300046794 Bacteria 2636
142 Ga0495600_0001390 3300046809 Bacteria 13370
143 Ga0495604_0000534 3300047317 Bacteria 33497
144 Ga0495604_0000925 3300047317 Bacteria 24435
145 Ga0495604_0062663 3300047317 Bacteria 2839
146 Ga0495636_0005490 3300047318 Bacteria 4981
147 Ga0495674_0073940 3300047319 Bacteria 2936
148 Ga0495676_0000578 3300047321 Bacteria 30172
149 Ga0495676_0002965 3300047321 Bacteria 15343
150 Ga0495680_0034437 3300047322 Bacteria 4089
151 Ga0495687_000608 3300047443 Bacteria 41847
152 Ga0495687_005460 3300047443 Bacteria 8097
153 Ga0495687_011702 3300047443 Bacteria 4694
154 Ga0495675_0083144 3300047444 Bacteria 2015
155 Ga0495685_002304 3300047447 Bacteria 5956
156 Ga0495685_008387 3300047447 Bacteria 3430
157 Ga0495685_028989 3300047447 Bacteria 1904
158 Ga0495681_0001121 3300047470 Bacteria 20318
159 Ga0495681_0001581 3300047470 Bacteria 16938
160 Ga0495593_0000887 3300047673 Bacteria 17377
161 Ga0495602_0008923 3300048088 Bacteria 10453
162 Ga0495614_0007872 3300048089 Bacteria 4738
163 Ga0495614_0021249 3300048089 Bacteria 2803
164 Ga0495614_0029244 3300048089 Bacteria 2371
165 Ga0495614_0032596 3300048089 Bacteria 2243
166 Ga0495626_0009273 3300048091 Bacteria 5325
167 Ga0495682_0016858 3300049460 Bacteria 2763
168 Ga0501031_0002529 3300049568 Bacteria 11645
169 Ga0501031_0010590 3300049568 Bacteria 6004
170 Ga0501033_0002605 3300049570 Bacteria 15201
171 Ga0501033_0004218 3300049570 Bacteria 11565
172 Ga0501033_0034021 3300049570 Bacteria 3824
173 Ga0501034_0003777 3300049571 Bacteria 17090
174 Ga0501034_0030056 3300049571 Bacteria 5523
175 Ga0501034_0035432 3300049571 Bacteria 5059
176 Ga0501034_0036021 3300049571 Bacteria 5016
177 Ga0501036_0004252 3300049572 Bacteria 11547
178 Ga0501036_0013919 3300049572 Bacteria 6690
179 Ga0501037_0004560 3300049573 Bacteria 10076
180 Ga0501037_0015835 3300049573 Bacteria 5550
181 Ga0501037_0113237 3300049573 Bacteria 1953
182 Ga0501038_0002308 3300049574 Bacteria 17738
183 Ga0501038_0013493 3300049574 Bacteria 7446
184 Ga0501038_0026803 3300049574 Bacteria 5131
185 Ga0501038_0047006 3300049574 Bacteria 3740
186 Ga0501039_0054254 3300049575 Bacteria 3102
187 Ga0501040_0016723 3300049576 Bacteria 4862
188 Ga0501041_0001720 3300049577 Bacteria 12275
189 Ga0501043_0002982 3300049579 Bacteria 14095
190 Ga0501043_0006999 3300049579 Bacteria 8984
191 Ga0501043_0009865 3300049579 Bacteria 7486
192 Ga0501043_0064197 3300049579 Bacteria 2883
193 Ga0501046_0006667 3300049580 Bacteria 10196
194 Ga0501046_0019685 3300049580 Bacteria 5594
195 Ga0501047_0000023 3300049581 Bacteria 240478
196 Ga0501047_0005683 3300049581 Bacteria 11738
197 Ga0501047_0027869 3300049581 Bacteria 5444
198 Ga0501047_0030323 3300049581 Bacteria 5214
199 Ga0501047_0090311 3300049581 Bacteria 2940
200 Ga0501047_0109286 3300049581 Bacteria 2648
201 Ga0501048_0023446 3300049582 Bacteria 4508
202 Ga0501048_0049399 3300049582 Bacteria 2997
203 Ga0501048_0056695 3300049582 Bacteria 2779
204 Ga0501067_0008039 3300049583 Bacteria 5859
205 Ga0501070_0006172 3300049586 Bacteria 10214
206 Ga0501071_0047126 3300049587 Bacteria 3096
207 Ga0501072_0040234 3300049588 Bacteria 3670
208 Ga0501074_0006196 3300049590 Bacteria 8635
209 Ga0501074_0012280 3300049590 Bacteria 6226
210 Ga0501083_0001532 3300049744 Bacteria 15795
211 Ga0501035_0004191 3300049822 Bacteria 13703
212 Ga0501035_0009003 3300049822 Bacteria 9284
213 Ga0501035_0023329 3300049822 Bacteria 5676
214 Ga0501035_0030344 3300049822 Bacteria 4929
215 Ga0501044_0004956 3300049823 Bacteria 14888
216 Ga0501044_0068812 3300049823 Bacteria 3605
217 Ga0501045_0040095 3300049824 Bacteria 3408
218 nmdc:mga06z11_275_c1 3300050494 Bacteria 20098
219 nmdc:mga04h51_4295_c1 3300050495 Bacteria 3533
220 nmdc:mga07m45_47420_c1 3300050496 Bacteria 2415
221 Ga0495601_0063092 3300053077 Bacteria 2354
222 Ga0500640_000988 3300053095 Bacteria 8108
223 Ga0500654_016409 3300053099 Bacteria 4863
224 Ga0500560_008732 3300053107 Bacteria 2456
225 Ga0500628_003927 3300053129 Bacteria 2454
226 Ga0500561_0000431 3300053137 Bacteria 6834
227 Ga0500573_0051435 3300053140 Bacteria 2369
228 Ga0500616_0010935 3300053153 Bacteria 5401
229 Ga0500633_0000327 3300053160 Bacteria 7103
230 Ga0500587_001836 3300053739 Bacteria 3021
231 Ga0501084_0007840 3300054114 Bacteria 8787
232 Ga0501082_0011777 3300060353 Bacteria 7519
233 Ga0466962_0000572 3300061719 Bacteria 16176
234 Ga0466962_0001673 3300061719 Bacteria 10405
235 Ga0466962_0015950 3300061719 Bacteria 3625
236 Ga0466962_0027929 3300061719 Bacteria 2704
237 3006323108 3006321560 Bacteria 8247479
238 2547410292 2547132111 Bacteria 8013147
239 2554260720 2554235005 Bacteria 6457341
240 2585298145 2582581312 Bacteria 7308206
241 2585304646 2582581313 Bacteria 10042643
242 2585314742 2582581314 Bacteria 11452267
243 2616698185 2616644814 Bacteria 11555299
244 2616901482 2616644941 Bacteria 8510691
245 2643762054 2643221548 Bacteria 8053412
246 2643901984 2643221578 Bacteria 9213798
247 2643946235 2643221587 Bacteria 7586415
248 2644017987 2643221601 Bacteria 7493239
249 2644180725 2643221631 Bacteria 8168043
250 2644261968 2643221647 Bacteria 10741251
251 2644388005 2643221670 Bacteria 6497041
252 2644408128 2643221673 Bacteria 9196637
253 2644433024 2643221677 Bacteria 7584031
254 2644438890 2643221678 Bacteria 9540101
255 2644460876 2643221682 Bacteria 6743283
256 2644631315 2643221714 Bacteria 9015452
257 2784591635 2784132148 Bacteria 8627943
258 2785340098 2784746763 Bacteria 9783172
259 2785372639 2784746768 Bacteria 10036182
260 2786675344 2786546132 Bacteria 10419719
261 2793983366 2791355406 Bacteria 11364898
262 2808844994 2808606359 Bacteria 9866990
263 2808914593 2808606375 Bacteria 9466072
264 2809235266 2808606448 Bacteria 8656184
265 2811843528 2808606982 Bacteria 7791042
266 2812354694 2811994879 Bacteria 9313447
267 2812477663 2811994917 Bacteria 7761064
268 2819698796 2818991463 Bacteria 7948711
269 2819740048 2818991472 Bacteria 10089953
270 2852636314 2852635781 Bacteria 8251373
271 2862183998 2862178590 Bacteria 8583590
272 2862283407 2862281513 Bacteria 9621493
273 2862294882 2862290372 Bacteria 7471434
274 2862390357 2862382967 Bacteria 10317375
275 2862507772 2862507626 Bacteria 9425308
276 2862576436 2862574272 Bacteria 10567477
277 2863409869 2863404153 Bacteria 9672205
278 2867374654 2867369537 Bacteria 6501581
279 2867432038 2867428634 Bacteria 9590268
280 2867475204 2867475112 Bacteria 6909112
281 2873152935 2873151551 Bacteria 8625867
282 2875397708 2875391855 Bacteria 7600475
283 2877678076 2877676314 Bacteria 9512378
284 2891332161 2891326441 Bacteria 6439512
285 2912716315 2912715099 Bacteria 9460473
286 2912729227 2912723979 Bacteria 8557534
287 2912763909 2912757875 Bacteria 7940295
288 2918507484 2918501144 Bacteria 8668083
289 2919471209 2919468124 Bacteria 9133025
290 2935395385 2935390628 Bacteria 7043367
291 2946046817 2946045630 Bacteria 8527308
292 2946070969 2946064051 Bacteria 8957905
293 2946078900 2946072368 Bacteria 8999607
294 2947225754 2947224130 Bacteria 9938529
295 2954009925 2954002825 Bacteria 9173742
296 2954382861 2954380949 Bacteria 10050426
297 2954680029 2954673503 Bacteria 9685905
298 2954684121 2954682443 Bacteria 9862841
299 2954693682 2954691527 Bacteria 10720516
300 2954708778 2954701450 Bacteria 10834262
301 2954713328 2954711539 Bacteria 10867210
302 2954723288 2954721474 Bacteria 10456478
303 2954738540 2954731030 Bacteria 10243860
304 2954742195 2954740390 Bacteria 10229294
305 2954757398 2954749733 Bacteria 10366972
306 2954761173 2954759201 Bacteria 9358192
307 2966599826 2966598605 Bacteria 7676064
308 2990061812 2990059506 Bacteria 9321252
309 2990090593 2990088156 Bacteria 6657676
310 2995464981 2995463766 Bacteria 8577691
311 2997457421 2997451912 Bacteria 8492419
312 2997603501 2997600082 Bacteria 9896405
313 3006397211 3006393351 Bacteria 6615579
314 3006427125 3006425503 Bacteria 6491253
315 3006488796 3006486233 Bacteria 8157040
316 3006494217 3006493962 Bacteria 8825450
317 8008563962 8008558824 Bacteria 10610750
318 8008576101 8008574985 Bacteria 7815457
319 8023626176 8023623736 Bacteria 8593882
320 8025533062 8025530807 Bacteria 8495698
321 8047895308 8047893842 Bacteria 11723082
322 8048130602 8048127548 Bacteria 11053136
323 8048363645 8048356638 Bacteria 11044339
324 8048372334 8048369669 Bacteria 11666822
325 8048381268 8048379754 Bacteria 11877923
326 8048407053 8048406513 Bacteria 8936924
327 8056837026 8056829672 Bacteria 9045328
328 JGI24739J22299_10008394
329 rootH1_10004752
330 Ga0070714_100000106
331 Ga0070714_100015372
332 Ga0070700_100000032
333 Ga0068853_100073653
334 Ga0070665_100059011
335 Ga0081455_10000323
336 Ga0075365_10030406
337 Ga0075368_10009026
338 Ga0075367_10004135
339 Ga0075370_10026918
340 Ga0105238_10140883
341 Ga0182008_10001814
342 Ga0182007_10000483
343 Ga0183367_1001
344 Ga0206353_10140313
345 Ga0224712_10020068
346 Ga0209758_1009624
347 Ga0207426_1002002
348 Ga0207664_10000047
349 Ga0207708_10000045
350 Ga0209813_10013219
351 Ga0268266_10086381
352 Ga0307517_10000344
353 Ga0307517_10002786
354 Ga0307515_10000055
355 Ga0307515_10055821
356 Ga0307511_10000113
357 Ga0307511_10051411
358 Ga0307512_10004676
359 Ga0307513_10099872
360 Ga0307509_10006014
361 Ga0307509_10037017
362 Ga0307509_10151427
363 Ga0307508_10021854
364 Ga0307508_10109810
365 Ga0307514_10045853
366 Ga0307516_10043667
367 Ga0307507_10000024
368 Ga0307507_10014314
369 Ga0307510_10069591
370 Ga0395898_0003315
371 Ga0395898_0008818
372 Ga0395901_0030851
373 Ga0439436_0000620
374 Ga0439436_0001554
375 Ga0439433_0002552
376 Ga0439449_0015815
377 Ga0439455_0004068
378 Ga0439457_000551
379 Ga0439457_000630
380 Ga0450896_003644
381 Ga0450903_000703
382 Ga0439458_0000748
383 Ga0466969_0001309
384 Ga0466969_0003283
385 Ga0466969_0030239
386 Ga0466972_0002204
387 Ga0466972_0016800
388 Ga0466972_0019880
389 Ga0466965_0011503
390 Ga0466966_0003392
391 Ga0466961_0002104
392 Ga0466963_0001025
393 Ga0466963_0003114
394 Ga0466964_0018400
395 Ga0466971_0000360
396 Ga0466971_0000463
397 Ga0466971_0001585
398 Ga0466971_0022483
399 Ga0466970_0001172
400 Ga0466970_0003693
401 Ga0466957_0009135
402 Ga0466960_0005265
403 Ga0466959_0002190
404 Ga0466959_0004284
405 Ga0466958_0001825
406 Ga0466958_0009093
407 Ga0466967_0001598
408 Ga0466967_0040745
409 Ga0466967_0080056
410 Ga0495617_008703
411 Ga0495592_0005077
412 Ga0495592_0010820
413 Ga0495603_0003753
414 Ga0495603_0007453
415 Ga0495603_0038678
416 Ga0495629_0005907
417 Ga0495629_0019741
418 Ga0495629_0057437
419 Ga0495651_0001909
420 Ga0495651_0003580
421 Ga0495605_0004744
422 Ga0495664_0000402
423 Ga0495585_0008095
424 Ga0495594_0000330
425 Ga0495594_0008522
426 Ga0495594_0010400
427 Ga0495596_0013252
428 Ga0495607_0047971
429 Ga0495583_0036924
430 Ga0495606_0014186
431 Ga0495610_0022147
432 Ga0495616_0007339
433 Ga0495618_0079365
434 Ga0495620_0009076
435 Ga0495620_0017050
436 Ga0495628_0040489
437 Ga0495630_0083136
438 Ga0495631_0011782
439 Ga0495643_0025017
440 Ga0495652_0002867
441 Ga0495652_0010502
442 Ga0495640_0010793
443 Ga0495587_0002204
444 Ga0495609_0004666
445 Ga0495645_0005253
446 Ga0495633_0004958
447 Ga0495634_0000714
448 Ga0495625_0007561
449 Ga0495625_0035124
450 Ga0495635_0000586
451 Ga0495635_0014748
452 Ga0495635_0055303
453 Ga0495588_0002835
454 Ga0495588_0010497
455 Ga0495657_0006494
456 Ga0495623_0026459
457 Ga0495646_0001476
458 Ga0495646_0027540
459 Ga0495658_0006674
460 Ga0495613_0000717
461 Ga0495613_0000948
462 Ga0495613_0105175
463 Ga0495670_0028314
464 Ga0495671_0008492
465 Ga0495589_0004254
466 Ga0495589_0008957
467 Ga0495589_0028897
468 Ga0495589_0032206
469 Ga0495600_0001390
470 Ga0495604_0000534
471 Ga0495604_0000925
472 Ga0495604_0062663
473 Ga0495636_0005490
474 Ga0495674_0073940
475 Ga0495676_0000578
476 Ga0495676_0002965
477 Ga0495680_0034437
478 Ga0495687_000608
479 Ga0495687_005460
480 Ga0495687_011702
481 Ga0495675_0083144
482 Ga0495685_002304
483 Ga0495685_008387
484 Ga0495685_028989
485 Ga0495681_0001121
486 Ga0495681_0001581
487 Ga0495593_0000887
488 Ga0495602_0008923
489 Ga0495614_0007872
490 Ga0495614_0021249
491 Ga0495614_0029244
492 Ga0495614_0032596
493 Ga0495626_0009273
494 Ga0495682_0016858
495 Ga0501031_0002529
496 Ga0501031_0010590
497 Ga0501033_0002605
498 Ga0501033_0004218
499 Ga0501033_0034021
500 Ga0501034_0003777
501 Ga0501034_0030056
502 Ga0501034_0035432
503 Ga0501034_0036021
504 Ga0501036_0004252
505 Ga0501036_0013919
506 Ga0501037_0004560
507 Ga0501037_0015835
508 Ga0501037_0113237
509 Ga0501038_0002308
510 Ga0501038_0013493
511 Ga0501038_0026803
512 Ga0501038_0047006
513 Ga0501039_0054254
514 Ga0501040_0016723
515 Ga0501041_0001720
516 Ga0501043_0002982
517 Ga0501043_0006999
518 Ga0501043_0009865
519 Ga0501043_0064197
520 Ga0501046_0006667
521 Ga0501046_0019685
522 Ga0501047_0000023
523 Ga0501047_0005683
524 Ga0501047_0027869
525 Ga0501047_0030323
526 Ga0501047_0090311
527 Ga0501047_0109286
528 Ga0501048_0023446
529 Ga0501048_0049399
530 Ga0501048_0056695
531 Ga0501067_0008039
532 Ga0501070_0006172
533 Ga0501071_0047126
534 Ga0501072_0040234
535 Ga0501074_0006196
536 Ga0501074_0012280
537 Ga0501083_0001532
538 Ga0501035_0004191
539 Ga0501035_0009003
540 Ga0501035_0023329
541 Ga0501035_0030344
542 Ga0501044_0004956
543 Ga0501044_0068812
544 Ga0501045_0040095
545 nmdc:mga06z11_275_c1
546 nmdc:mga04h51_4295_c1
547 nmdc:mga07m45_47420_c1
548 Ga0495601_0063092
549 Ga0500640_000988
550 Ga0500654_016409
551 Ga0500560_008732
552 Ga0500628_003927
553 Ga0500561_0000431
554 Ga0500573_0051435
555 Ga0500616_0010935
556 Ga0500633_0000327
557 Ga0500587_001836
558 Ga0501084_0007840
559 Ga0501082_0011777
560 Ga0466962_0000572
561 Ga0466962_0001673
562 Ga0466962_0015950
563 Ga0466962_0027929
564 3006323108
565 2547410292
566 2554260720
567 2585298145
568 2585304646
569 2585314742
570 2616698185
571 2616901482
572 2643762054
573 2643901984
574 2643946235
575 2644017987
576 2644180725
577 2644261968
578 2644388005
579 2644408128
580 2644433024
581 2644438890
582 2644460876
583 2644631315
584 2784591635
585 2785340098
586 2785372639
587 2786675344
588 2793983366
589 2808844994
590 2808914593
591 2809235266
592 2811843528
593 2812354694
594 2812477663
595 2819698796
596 2819740048
597 2852636314
598 2862183998
599 2862283407
600 2862294882
601 2862390357
602 2862507772
603 2862576436
604 2863409869
605 2867374654
606 2867432038
607 2867475204
608 2873152935
609 2875397708
610 2877678076
611 2891332161
612 2912716315
613 2912729227
614 2912763909
615 2918507484
616 2919471209
617 2935395385
618 2946046817
619 2946070969
620 2946078900
621 2947225754
622 2954009925
623 2954382861
624 2954680029
625 2954684121
626 2954693682
627 2954708778
628 2954713328
629 2954723288
630 2954738540
631 2954742195
632 2954757398
633 2954761173
634 2966599826
635 2990061812
636 2990090593
637 2995464981
638 2997457421
639 2997603501
640 3006397211
641 3006427125
642 3006488796
643 3006494217
644 8008563962
645 8008576101
646 8023626176
647 8025533062
648 8047895308
649 8048130602
650 8048363645
651 8048372334
652 8048381268
653 8048407053
654 8056837026

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

213

309

0.99

PF00725

3HCDH

3-hydroxyacyl-CoA dehydrogenase, C-terminal domain

520

616

0.99

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

339

518

0.99

PF02737

3HCDH_N

3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

32

211

0.99

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

339

477

0.85

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

32

169

0.74

Structural Annotation

Top 5 Hits

ID Description Score Start End
2vvl-assembly4.cif.gz_F the structure of mao-n-d3, a variant of monoamine oxidase from aspergillus niger. 0.9856 16 44
7vwp-assembly1.cif.gz_D-2 structure of the flavin-dependent monooxygenase flso1 from the biosynthesis of fluostatinsin 0.9856 16 43
7vwp-assembly1.cif.gz_A structure of the flavin-dependent monooxygenase flso1 from the biosynthesis of fluostatinsin 0.9825 16 43
7vwp-assembly2.cif.gz_B structure of the flavin-dependent monooxygenase flso1 from the biosynthesis of fluostatinsin 0.9819 16 43
3if9-assembly1.cif.gz_B-2 crystal structure of glycine oxidase g51s/a54r/h244a mutant in complex with inhibitor glycolate 0.9809 16 45
ID Description Score Start End Superfamily
af_I1MHA5_112_472_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9999 305 332 3.50.50.60
af_P9WNY9_4_366_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9923 16 45 3.50.50.60
6hrdD02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9876 494 578 1.10.1040.10
4kuhF02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9868 494 578 1.10.1040.10
4kueB02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9864 494 578 1.10.1040.10
ID Description Score Start End GO Terms
AF-A0A6B3HMS0-F1-model_v4 NAD(P)-binding domain-containing protein 1.003 305 392 GO:0006635
GO:0008691
GO:0070403
AF-A0A656TFL7-F1-model_v4 deleted 1.002 189 276
AF-A0A7C4HZB3-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase 0.9983 14 85 GO:0006631
GO:0016491
GO:0070403
AF-A0A2V8ID11-F1-model_v4 3-hydroxybutyryl-CoA dehydrogenase 0.996 13 120 GO:0006631
GO:0016491
GO:0070403
AF-X1REX1-F1-model_v4 3-hydroxyacyl-CoA dehydrogenase NAD binding domain-containing protein 0.9957 12 93 GO:0006631
GO:0016491
GO:0070403

Map