F408997

General Info

Members Datasets Scaffolds Average Seq Length
327 199 654 117

Family's Representative Sequence

Representative Sequence 3300053139|Ga0500568_0006605|Ga0500568_0006605_5218_5601
Length 127
Sequence MIGLNDDDERDTAPGDLLPLPPATFHILLAVADDERHGYGIIQDVAARTNGSLRLSPGTLYRSIQRMLEQGLLVEVKERPAAPGDDERRRYYRITPLGRLVAEAEARRLVQLVDMARAARFVPETGR

Samples

Sample ID Description Type Environment
1 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
41 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
44 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
45 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
46 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
49 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
50 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
65 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
66 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
69 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
76 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
77 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
78 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
79 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
80 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
81 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
82 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
83 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
84 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
122 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
125 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
126 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
127 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
128 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
129 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
130 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
131 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
132 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
133 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
134 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
135 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
136 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
137 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
138 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
139 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
140 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
141 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
142 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
143 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
144 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
145 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
146 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
147 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
148 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
149 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
150 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
151 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
152 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
153 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
154 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
155 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
156 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
157 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
158 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
159 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
160 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
161 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
162 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
163 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
164 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
165 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
166 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
167 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
168 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
169 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
170 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
171 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
172 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
173 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
174 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
175 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
176 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
177 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
178 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
179 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
180 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
181 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
183 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
184 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
185 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
186 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
187 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
188 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
191 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
192 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
193 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
194 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
195 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
196 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
197 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
198 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
199 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.5
Nodule 0
Rhizoplane 0.92
Rhizosphere 92.05
Stem 0
Stem Tuber 0
Unclassified 33.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500568_0006605 3300053139 Bacteria 5800
2 Ga0065712_10069180 3300005290 Bacteria 7810
3 Ga0070683_100001215 3300005329 Bacteria 19570
4 Ga0070683_100100925 3300005329 Unclassified 2717
5 Ga0070690_100200961 3300005330 Bacteria 1387
6 Ga0070670_100439054 3300005331 Bacteria 1156
7 Ga0070689_100084597 3300005340 Bacteria 2493
8 Ga0070689_101966421 3300005340 Bacteria 534
9 Ga0070661_101277831 3300005344 Bacteria 615
10 Ga0070668_101469713 3300005347 Unclassified 622
11 Ga0070669_101394439 3300005353 Unclassified 608
12 Ga0070675_100000094 3300005354 Bacteria 50939
13 Ga0070675_100088055 3300005354 Bacteria 2597
14 Ga0070675_101489506 3300005354 Bacteria 624
15 Ga0070671_100654136 3300005355 Archaea 910
16 Ga0070674_100705573 3300005356 Bacteria 863
17 Ga0070673_101605893 3300005364 Bacteria 614
18 Ga0070688_100033221 3300005365 Bacteria 3117
19 Ga0070688_100086426 3300005365 Unclassified 2040
20 Ga0070667_100146051 3300005367 Bacteria 2074
21 Ga0070667_101338819 3300005367 Bacteria 671
22 Ga0070714_100008165 3300005435 Bacteria 8160
23 Ga0070711_100598984 3300005439 Bacteria 919
24 Ga0070694_100018155 3300005444 Bacteria 4461
25 Ga0070678_100499750 3300005456 Bacteria 1073
26 Ga0068867_101450162 3300005459 Unclassified 638
27 Ga0070685_10094571 3300005466 Unclassified 1815
28 Ga0070685_10437686 3300005466 Bacteria 913
29 Ga0070707_100072205 3300005468 Bacteria 3326
30 Ga0070707_100802644 3300005468 Bacteria 905
31 Ga0070698_100373542 3300005471 Unclassified 1358
32 Ga0070699_100269617 3300005518 Unclassified 1523
33 Ga0070684_100028686 3300005535 Bacteria 4708
34 Ga0070684_100193606 3300005535 Bacteria 1851
35 Ga0070684_100498724 3300005535 Bacteria 1127
36 Ga0070697_101780903 3300005536 Bacteria 551
37 Ga0070686_100234970 3300005544 Unclassified 1332
38 Ga0070695_100086353 3300005545 Bacteria 2085
39 Ga0070665_100231271 3300005548 Bacteria 1849
40 Ga0070665_100263746 3300005548 Bacteria 1724
41 Ga0070704_100020566 3300005549 Bacteria 4259
42 Ga0068855_101022395 3300005563 Unclassified 867
43 Ga0068855_101481564 3300005563 Unclassified 697
44 Ga0070664_100154948 3300005564 Bacteria 2024
45 Ga0068852_100016972 3300005616 Bacteria 5698
46 Ga0068859_100059756 3300005617 Bacteria 3840
47 Ga0068859_100080003 3300005617 Unclassified 3309
48 Ga0068864_100637230 3300005618 Bacteria 1037
49 Ga0068866_10325108 3300005718 Unclassified 969
50 Ga0068863_100177080 3300005841 Bacteria 2047
51 Ga0068863_101114411 3300005841 Bacteria 794
52 Ga0068858_100260918 3300005842 Unclassified 1647
53 Ga0068858_100923329 3300005842 Unclassified 854
54 Ga0068858_100987116 3300005842 Bacteria 825
55 Ga0068862_100182207 3300005844 Unclassified 1886
56 Ga0075368_10585264 3300006042 Unclassified 504
57 Ga0075363_100337231 3300006048 Bacteria 879
58 Ga0075364_10414882 3300006051 Bacteria 919
59 Ga0075364_10444325 3300006051 Unclassified 886
60 Ga0075432_10044171 3300006058 Unclassified 1562
61 Ga0070716_100249019 3300006173 Unclassified 1209
62 Ga0070716_101510019 3300006173 Bacteria 549
63 Ga0070712_100703542 3300006175 Bacteria 862
64 Ga0075362_10688518 3300006177 Bacteria 533
65 Ga0075367_10027403 3300006178 Bacteria 3242
66 Ga0075367_10378416 3300006178 Unclassified 894
67 Ga0075370_10169509 3300006353 Bacteria 1283
68 Ga0068871_101044533 3300006358 Unclassified 762
69 Ga0075428_100605450 3300006844 Unclassified 1170
70 Ga0075431_100073488 3300006847 Unclassified 3527
71 Ga0075431_101279186 3300006847 Bacteria 695
72 Ga0075433_10140934 3300006852 Bacteria 2143
73 Ga0075433_10199884 3300006852 Bacteria 1777
74 Ga0075434_100002799 3300006871 Bacteria 15456
75 Ga0075434_100586309 3300006871 Bacteria 1134
76 Ga0075429_101582708 3300006880 Bacteria 570
77 Ga0075436_100006039 3300006914 Bacteria 8311
78 Ga0075436_100251563 3300006914 Bacteria 1258
79 Ga0097620_100059758 3300006931 Bacteria 3840
80 Ga0097620_100080004 3300006931 Unclassified 3309
81 Ga0075435_100003579 3300007076 Bacteria 10554
82 Ga0075435_100019879 3300007076 Bacteria 5136
83 Ga0075435_100486285 3300007076 Bacteria 1066
84 Ga0075435_100486350 3300007076 Bacteria 1066
85 Ga0105245_10541671 3300009098 Unclassified 1185
86 Ga0105245_13085029 3300009098 Unclassified 516
87 Ga0114129_10010029 3300009147 Bacteria 13504
88 Ga0114129_10082694 3300009147 Bacteria 4461
89 Ga0114129_10340656 3300009147 Bacteria 1989
90 Ga0105243_10087280 3300009148 Unclassified 2560
91 Ga0105243_10316770 3300009148 Bacteria 1420
92 Ga0105241_10016596 3300009174 Bacteria 5403
93 Ga0105241_12327535 3300009174 Unclassified 533
94 Ga0105242_10016490 3300009176 Bacteria 5744
95 Ga0105248_10088953 3300009177 Bacteria 3476
96 Ga0105248_10204087 3300009177 Unclassified 2227
97 Ga0105248_10656269 3300009177 Unclassified 1184
98 Ga0105248_11624141 3300009177 Bacteria 732
99 Ga0105237_10026048 3300009545 Bacteria 5977
100 Ga0105237_10472352 3300009545 Bacteria 1260
101 Ga0105238_10039961 3300009551 Bacteria 4755
102 Ga0105238_11037258 3300009551 Unclassified 841
103 Ga0105249_10330247 3300009553 Unclassified 1538
104 Ga0105239_13394139 3300010375 Unclassified 518
105 Ga0105246_10373548 3300011119 Archaea 1176
106 Ga0157373_10295909 3300013100 Unclassified 1148
107 Ga0157370_10021006 3300013104 Bacteria 6510
108 Ga0157369_10037905 3300013105 Bacteria 5274
109 Ga0157369_10599596 3300013105 Bacteria 1137
110 Ga0157374_10523239 3300013296 Bacteria 1192
111 Ga0157374_10684828 3300013296 Bacteria 1038
112 Ga0157374_12889883 3300013296 Unclassified 508
113 Ga0157378_10408762 3300013297 Unclassified 1339
114 Ga0157378_11454088 3300013297 Bacteria 729
115 Ga0163162_10057889 3300013306 Unclassified 3903
116 Ga0163162_10559668 3300013306 Bacteria 1271
117 Ga0157372_10023883 3300013307 Bacteria 6633
118 Ga0157372_10147114 3300013307 Bacteria 2717
119 Ga0157372_10962183 3300013307 Unclassified 989
120 Ga0157375_10136456 3300013308 Bacteria 2577
121 Ga0157375_10174112 3300013308 Bacteria 2301
122 Ga0163163_10035088 3300014325 Bacteria 4863
123 Ga0163163_11032761 3300014325 Bacteria 885
124 Ga0163163_12178976 3300014325 Bacteria 613
125 Ga0157380_10124753 3300014326 Bacteria 2187
126 Ga0157380_11294120 3300014326 Unclassified 776
127 Ga0157377_10081977 3300014745 Bacteria 1888
128 Ga0157377_10166101 3300014745 Unclassified 1376
129 Ga0157376_10077071 3300014969 Bacteria 2851
130 Ga0157376_11769469 3300014969 Bacteria 654
131 Ga0163161_10298837 3300017792 Bacteria 1267
132 Ga0213872_10000214 3300021361 Bacteria 51205
133 Ga0213875_10197378 3300021388 Unclassified 946
134 Ga0213875_10320669 3300021388 Unclassified 734
135 Ga0207645_10114570 3300025907 Unclassified 1747
136 Ga0207645_10720590 3300025907 Bacteria 678
137 Ga0207643_10268501 3300025908 Bacteria 1055
138 Ga0207643_11048190 3300025908 Unclassified 527
139 Ga0207705_11533136 3300025909 Unclassified 504
140 Ga0207654_11257837 3300025911 Unclassified 539
141 Ga0207695_10020295 3300025913 Bacteria 7616
142 Ga0207671_10415357 3300025914 Bacteria 1070
143 Ga0207693_10608122 3300025915 Unclassified 851
144 Ga0207662_10060818 3300025918 Bacteria 2266
145 Ga0207646_10963626 3300025922 Bacteria 755
146 Ga0207681_10069245 3300025923 Bacteria 2454
147 Ga0207694_10085897 3300025924 Bacteria 2477
148 Ga0207659_10001333 3300025926 Bacteria 14769
149 Ga0207659_11842600 3300025926 Unclassified 513
150 Ga0207687_11401561 3300025927 Bacteria 601
151 Ga0207664_10033733 3300025929 Bacteria 3936
152 Ga0207644_11469950 3300025931 Archaea 572
153 Ga0207686_10040815 3300025934 Unclassified 2824
154 Ga0207709_10207201 3300025935 Bacteria 1405
155 Ga0207670_10073033 3300025936 Bacteria 2378
156 Ga0207669_10193698 3300025937 Unclassified 1469
157 Ga0207669_10955413 3300025937 Bacteria 718
158 Ga0207665_10338729 3300025939 Unclassified 1133
159 Ga0207665_10865147 3300025939 Bacteria 716
160 Ga0207691_10250395 3300025940 Unclassified 1529
161 Ga0207711_10111633 3300025941 Bacteria 2432
162 Ga0207711_10119376 3300025941 Bacteria 2353
163 Ga0207711_10245513 3300025941 Bacteria 1642
164 Ga0207711_11530609 3300025941 Bacteria 610
165 Ga0207711_12062376 3300025941 Unclassified 513
166 Ga0207661_10009894 3300025944 Bacteria 6850
167 Ga0207661_10040322 3300025944 Unclassified 3670
168 Ga0207661_10457128 3300025944 Unclassified 1163
169 Ga0207661_11474415 3300025944 Bacteria 624
170 Ga0207679_10043284 3300025945 Unclassified 3242
171 Ga0207651_10151091 3300025960 Unclassified 1808
172 Ga0207712_10139595 3300025961 Unclassified 1858
173 Ga0207668_10848504 3300025972 Bacteria 811
174 Ga0207668_11431231 3300025972 Bacteria 623
175 Ga0207677_10133343 3300026023 Unclassified 1890
176 Ga0207703_10763931 3300026035 Unclassified 921
177 Ga0207708_11277715 3300026075 Unclassified 643
178 Ga0207641_10817576 3300026088 Bacteria 922
179 Ga0207676_10246561 3300026095 Unclassified 1606
180 Ga0207676_10481063 3300026095 Bacteria 1176
181 Ga0207683_10706690 3300026121 Unclassified 935
182 Ga0207698_10006108 3300026142 Bacteria 7494
183 Ga0268266_10133760 3300028379 Bacteria 2220
184 Ga0268266_10829130 3300028379 Unclassified 894
185 Ga0268265_10048471 3300028380 Unclassified 3189
186 Ga0268265_11746741 3300028380 Unclassified 628
187 Ga0268264_10782876 3300028381 Bacteria 952
188 Ga0307513_10990104 3300031456 Unclassified 550
189 Ga0307405_10220886 3300031731 Unclassified 1390
190 Ga0307410_10309577 3300031852 Bacteria 1249
191 Ga0307412_11990803 3300031911 Unclassified 537
192 Ga0307416_101351031 3300032002 Unclassified 818
193 Ga0307415_100684067 3300032126 Unclassified 924
194 Ga0373934_0170359 3300035086 Bacteria 894
195 Ga0373934_0370925 3300035086 Bacteria 597
196 Ga0373954_0371819 3300035118 Bacteria 706
197 Ga0373957_0522326 3300035120 Bacteria 518
198 Ga0373955_0488494 3300035172 Bacteria 752
199 Ga0373931_0383131 3300035691 Archaea 887
200 Ga0373927_0084504 3300035695 Bacteria 2059
201 Ga0373947_0884338 3300035725 Bacteria 610
202 Ga0373925_0215829 3300037068 Unclassified 1530
203 Ga0436364_0630365 3300037853 Bacteria 4977
204 Ga0436364_1138382 3300037853 Unclassified 3230
205 Ga0436361_0706550 3300039447 Bacteria 75639
206 Ga0439431_0052838 3300041997 Bacteria 1057
207 Ga0439463_205188 3300042016 Unclassified 512
208 Ga0439434_0126904 3300042435 Bacteria 835
209 Ga0439460_0140861 3300042461 Bacteria 800
210 Ga0495592_0079021 3300046454 Bacteria 2382
211 Ga0495592_0083804 3300046454 Bacteria 2301
212 Ga0495651_0030565 3300046462 Unclassified 4200
213 Ga0495651_0037700 3300046462 Bacteria 3764
214 Ga0495580_0001444 3300046472 Bacteria 20811
215 Ga0495580_0055576 3300046472 Bacteria 2789
216 Ga0495580_0147276 3300046472 Bacteria 1632
217 Ga0495582_0651024 3300046473 Bacteria 610
218 Ga0495662_0031557 3300046476 Bacteria 2559
219 Ga0495664_0001908 3300046477 Bacteria 11090
220 Ga0495664_0026501 3300046477 Bacteria 3375
221 Ga0495664_0371634 3300046477 Bacteria 860
222 Ga0495585_0503077 3300046492 Unclassified 576
223 Ga0495594_0337364 3300046499 Unclassified 858
224 Ga0495594_0589811 3300046499 Unclassified 630
225 Ga0495608_0178164 3300046511 Unclassified 1345
226 Ga0495618_0027508 3300046514 Bacteria 3540
227 Ga0495628_0015075 3300046516 Bacteria 6455
228 Ga0495628_0302176 3300046516 Bacteria 1184
229 Ga0495628_0861299 3300046516 Bacteria 631
230 Ga0495630_0227124 3300046517 Bacteria 1426
231 Ga0495630_0245851 3300046517 Bacteria 1367
232 Ga0495652_0068697 3300046529 Unclassified 2968
233 Ga0495652_0095059 3300046529 Bacteria 2429
234 Ga0495665_0010559 3300046531 Bacteria 4998
235 Ga0495665_0061131 3300046531 Unclassified 1989
236 Ga0495665_0075190 3300046531 Bacteria 1778
237 Ga0495665_0419941 3300046531 Bacteria 677
238 Ga0495665_0501533 3300046531 Unclassified 611
239 Ga0495640_0036838 3300046533 Bacteria 3454
240 Ga0495640_0238666 3300046533 Bacteria 1141
241 Ga0495587_0080846 3300046536 Unclassified 1883
242 Ga0495587_0154951 3300046536 Bacteria 1305
243 Ga0495587_0193159 3300046536 Bacteria 1152
244 Ga0495645_0001279 3300046543 Bacteria 17135
245 Ga0495667_0045160 3300046559 Unclassified 2918
246 Ga0495667_0238501 3300046559 Bacteria 1159
247 Ga0495667_0328515 3300046559 Bacteria 967
248 Ga0495667_0508948 3300046559 Unclassified 754
249 Ga0495656_0766236 3300046615 Unclassified 521
250 Ga0495634_0030342 3300046642 Bacteria 3734
251 Ga0495635_0296448 3300046663 Bacteria 1084
252 Ga0495657_0676764 3300046675 Bacteria 594
253 Ga0495599_0007024 3300046678 Bacteria 6810
254 Ga0495599_0128875 3300046678 Bacteria 1572
255 Ga0495623_0010626 3300046679 Bacteria 5958
256 Ga0495623_0162406 3300046679 Bacteria 1312
257 Ga0495646_0033881 3300046680 Bacteria 3175
258 Ga0495646_0247458 3300046680 Unclassified 956
259 Ga0495669_0625294 3300046684 Bacteria 524
260 Ga0495613_0034730 3300046689 Unclassified 3744
261 Ga0495613_0354115 3300046689 Unclassified 1008
262 Ga0495613_0528203 3300046689 Unclassified 792
263 Ga0495613_0652144 3300046689 Bacteria 696
264 Ga0495624_0682612 3300046690 Unclassified 610
265 Ga0495671_0605917 3300046692 Unclassified 521
266 Ga0495600_0172291 3300046809 Unclassified 1397
267 Ga0495600_0244641 3300046809 Bacteria 1142
268 Ga0495600_0347512 3300046809 Bacteria 929
269 Ga0495581_0484222 3300047315 Bacteria 720
270 Ga0495581_0667348 3300047315 Bacteria 600
271 Ga0495604_0111213 3300047317 Unclassified 1997
272 Ga0495604_0468200 3300047317 Unclassified 821
273 Ga0495674_0010205 3300047319 Bacteria 8896
274 Ga0495674_0064633 3300047319 Bacteria 3180
275 Ga0495674_0099381 3300047319 Unclassified 2477
276 Ga0495674_0354997 3300047319 Bacteria 1189
277 Ga0495674_1136114 3300047319 Unclassified 593
278 Ga0495680_0027404 3300047322 Bacteria 4683
279 Ga0495680_0231916 3300047322 Unclassified 1314
280 Ga0495675_0059619 3300047444 Unclassified 2420
281 Ga0495675_0067525 3300047444 Bacteria 2259
282 Ga0495675_0083162 3300047444 Bacteria 2015
283 Ga0495675_0715124 3300047444 Unclassified 560
284 Ga0495684_0020970 3300047471 Bacteria 5033
285 Ga0495684_0076937 3300047471 Unclassified 2534
286 Ga0495684_0197271 3300047471 Bacteria 1485
287 Ga0495684_0280984 3300047471 Bacteria 1201
288 Ga0495602_0096954 3300048088 Unclassified 2431
289 Ga0495602_0746268 3300048088 Bacteria 661
290 Ga0495602_0797544 3300048088 Bacteria 634
291 Ga0495602_0911635 3300048088 Bacteria 584
292 Ga0496106_0451354 3300048909 Bacteria 1033
293 Ga0496109_0926555 3300048912 Unclassified 809
294 Ga0496112_0265355 3300048915 Bacteria 1666
295 Ga0501048_0830641 3300049582 Unclassified 664
296 Ga0501198_154406 3300049649 Bacteria 508
297 nmdc:mga03n38_214766_c1 3300050490 Bacteria 1001
298 nmdc:mga00v17_167625_c1 3300050491 Bacteria 1415
299 nmdc:mga00v17_402998_c1 3300050491 Unclassified 889
300 nmdc:mga06z11_268022_c1 3300050494 Bacteria 1009
301 nmdc:mga06z11_38317_c1 3300050494 Bacteria 2380
302 nmdc:mga05p37_116647_c1 3300050507 Bacteria 3281
303 nmdc:mga05p37_1312676_c1 3300050507 Bacteria 736
304 nmdc:mga05p37_19451_c1 3300050507 Bacteria 8215
305 nmdc:mga09592_1260333_c1 3300050508 Bacteria 609
306 nmdc:mga0qj67_119579_c1 3300050509 Bacteria 2130
307 nmdc:mga06r32_90953_c1 3300050510 Bacteria 2982
308 nmdc:mga0n895_114532_c1 3300050512 Bacteria 2715
309 nmdc:mga0n895_66819_c1 3300050512 Bacteria 3560
310 nmdc:mga0n895_682247_c1 3300050512 Bacteria 1024
311 nmdc:mga0n895_99345_c1 3300050512 Bacteria 2919
312 nmdc:mga0rr50_1075301_c1 3300050513 Bacteria 685
313 nmdc:mga0rr50_22935_c1 3300050513 Bacteria 4294
314 nmdc:mga0rr50_28551_c1 3300050513 Bacteria 3923
315 nmdc:mga0rr50_953490_c1 3300050513 Unclassified 731
316 nmdc:mga08x19_106713_c1 3300050514 Bacteria 1864
317 nmdc:mga08x19_199652_c1 3300050514 Bacteria 1371
318 nmdc:mga0a205_61429_c1 3300050515 Bacteria 3630
319 nmdc:mga0a205_70433_c1 3300050515 Bacteria 3376
320 Ga0500592_005985 3300053116 Bacteria 1936
321 Ga0500658_0186465 3300053134 Bacteria 946
322 Ga0500616_0000718 3300053153 Bacteria 38389
323 Ga0500645_000154 3300053730 Bacteria 53453
324 Ga0590071_000417 3300059421 Bacteria 12469
325 Ga0590075_000136 3300059424 Bacteria 19187
326 Ga0590075_017779 3300059424 Unclassified 1755
327 Ga0590075_199277 3300059424 Unclassified 530
328 Ga0500568_0006605
329 Ga0065712_10069180
330 Ga0070683_100001215
331 Ga0070683_100100925
332 Ga0070690_100200961
333 Ga0070670_100439054
334 Ga0070689_100084597
335 Ga0070689_101966421
336 Ga0070661_101277831
337 Ga0070668_101469713
338 Ga0070669_101394439
339 Ga0070675_100000094
340 Ga0070675_100088055
341 Ga0070675_101489506
342 Ga0070671_100654136
343 Ga0070674_100705573
344 Ga0070673_101605893
345 Ga0070688_100033221
346 Ga0070688_100086426
347 Ga0070667_100146051
348 Ga0070667_101338819
349 Ga0070714_100008165
350 Ga0070711_100598984
351 Ga0070694_100018155
352 Ga0070678_100499750
353 Ga0068867_101450162
354 Ga0070685_10094571
355 Ga0070685_10437686
356 Ga0070707_100072205
357 Ga0070707_100802644
358 Ga0070698_100373542
359 Ga0070699_100269617
360 Ga0070684_100028686
361 Ga0070684_100193606
362 Ga0070684_100498724
363 Ga0070697_101780903
364 Ga0070686_100234970
365 Ga0070695_100086353
366 Ga0070665_100231271
367 Ga0070665_100263746
368 Ga0070704_100020566
369 Ga0068855_101022395
370 Ga0068855_101481564
371 Ga0070664_100154948
372 Ga0068852_100016972
373 Ga0068859_100059756
374 Ga0068859_100080003
375 Ga0068864_100637230
376 Ga0068866_10325108
377 Ga0068863_100177080
378 Ga0068863_101114411
379 Ga0068858_100260918
380 Ga0068858_100923329
381 Ga0068858_100987116
382 Ga0068862_100182207
383 Ga0075368_10585264
384 Ga0075363_100337231
385 Ga0075364_10414882
386 Ga0075364_10444325
387 Ga0075432_10044171
388 Ga0070716_100249019
389 Ga0070716_101510019
390 Ga0070712_100703542
391 Ga0075362_10688518
392 Ga0075367_10027403
393 Ga0075367_10378416
394 Ga0075370_10169509
395 Ga0068871_101044533
396 Ga0075428_100605450
397 Ga0075431_100073488
398 Ga0075431_101279186
399 Ga0075433_10140934
400 Ga0075433_10199884
401 Ga0075434_100002799
402 Ga0075434_100586309
403 Ga0075429_101582708
404 Ga0075436_100006039
405 Ga0075436_100251563
406 Ga0097620_100059758
407 Ga0097620_100080004
408 Ga0075435_100003579
409 Ga0075435_100019879
410 Ga0075435_100486285
411 Ga0075435_100486350
412 Ga0105245_10541671
413 Ga0105245_13085029
414 Ga0114129_10010029
415 Ga0114129_10082694
416 Ga0114129_10340656
417 Ga0105243_10087280
418 Ga0105243_10316770
419 Ga0105241_10016596
420 Ga0105241_12327535
421 Ga0105242_10016490
422 Ga0105248_10088953
423 Ga0105248_10204087
424 Ga0105248_10656269
425 Ga0105248_11624141
426 Ga0105237_10026048
427 Ga0105237_10472352
428 Ga0105238_10039961
429 Ga0105238_11037258
430 Ga0105249_10330247
431 Ga0105239_13394139
432 Ga0105246_10373548
433 Ga0157373_10295909
434 Ga0157370_10021006
435 Ga0157369_10037905
436 Ga0157369_10599596
437 Ga0157374_10523239
438 Ga0157374_10684828
439 Ga0157374_12889883
440 Ga0157378_10408762
441 Ga0157378_11454088
442 Ga0163162_10057889
443 Ga0163162_10559668
444 Ga0157372_10023883
445 Ga0157372_10147114
446 Ga0157372_10962183
447 Ga0157375_10136456
448 Ga0157375_10174112
449 Ga0163163_10035088
450 Ga0163163_11032761
451 Ga0163163_12178976
452 Ga0157380_10124753
453 Ga0157380_11294120
454 Ga0157377_10081977
455 Ga0157377_10166101
456 Ga0157376_10077071
457 Ga0157376_11769469
458 Ga0163161_10298837
459 Ga0213872_10000214
460 Ga0213875_10197378
461 Ga0213875_10320669
462 Ga0207645_10114570
463 Ga0207645_10720590
464 Ga0207643_10268501
465 Ga0207643_11048190
466 Ga0207705_11533136
467 Ga0207654_11257837
468 Ga0207695_10020295
469 Ga0207671_10415357
470 Ga0207693_10608122
471 Ga0207662_10060818
472 Ga0207646_10963626
473 Ga0207681_10069245
474 Ga0207694_10085897
475 Ga0207659_10001333
476 Ga0207659_11842600
477 Ga0207687_11401561
478 Ga0207664_10033733
479 Ga0207644_11469950
480 Ga0207686_10040815
481 Ga0207709_10207201
482 Ga0207670_10073033
483 Ga0207669_10193698
484 Ga0207669_10955413
485 Ga0207665_10338729
486 Ga0207665_10865147
487 Ga0207691_10250395
488 Ga0207711_10111633
489 Ga0207711_10119376
490 Ga0207711_10245513
491 Ga0207711_11530609
492 Ga0207711_12062376
493 Ga0207661_10009894
494 Ga0207661_10040322
495 Ga0207661_10457128
496 Ga0207661_11474415
497 Ga0207679_10043284
498 Ga0207651_10151091
499 Ga0207712_10139595
500 Ga0207668_10848504
501 Ga0207668_11431231
502 Ga0207677_10133343
503 Ga0207703_10763931
504 Ga0207708_11277715
505 Ga0207641_10817576
506 Ga0207676_10246561
507 Ga0207676_10481063
508 Ga0207683_10706690
509 Ga0207698_10006108
510 Ga0268266_10133760
511 Ga0268266_10829130
512 Ga0268265_10048471
513 Ga0268265_11746741
514 Ga0268264_10782876
515 Ga0307513_10990104
516 Ga0307405_10220886
517 Ga0307410_10309577
518 Ga0307412_11990803
519 Ga0307416_101351031
520 Ga0307415_100684067
521 Ga0373934_0170359
522 Ga0373934_0370925
523 Ga0373954_0371819
524 Ga0373957_0522326
525 Ga0373955_0488494
526 Ga0373931_0383131
527 Ga0373927_0084504
528 Ga0373947_0884338
529 Ga0373925_0215829
530 Ga0436364_0630365
531 Ga0436364_1138382
532 Ga0436361_0706550
533 Ga0439431_0052838
534 Ga0439463_205188
535 Ga0439434_0126904
536 Ga0439460_0140861
537 Ga0495592_0079021
538 Ga0495592_0083804
539 Ga0495651_0030565
540 Ga0495651_0037700
541 Ga0495580_0001444
542 Ga0495580_0055576
543 Ga0495580_0147276
544 Ga0495582_0651024
545 Ga0495662_0031557
546 Ga0495664_0001908
547 Ga0495664_0026501
548 Ga0495664_0371634
549 Ga0495585_0503077
550 Ga0495594_0337364
551 Ga0495594_0589811
552 Ga0495608_0178164
553 Ga0495618_0027508
554 Ga0495628_0015075
555 Ga0495628_0302176
556 Ga0495628_0861299
557 Ga0495630_0227124
558 Ga0495630_0245851
559 Ga0495652_0068697
560 Ga0495652_0095059
561 Ga0495665_0010559
562 Ga0495665_0061131
563 Ga0495665_0075190
564 Ga0495665_0419941
565 Ga0495665_0501533
566 Ga0495640_0036838
567 Ga0495640_0238666
568 Ga0495587_0080846
569 Ga0495587_0154951
570 Ga0495587_0193159
571 Ga0495645_0001279
572 Ga0495667_0045160
573 Ga0495667_0238501
574 Ga0495667_0328515
575 Ga0495667_0508948
576 Ga0495656_0766236
577 Ga0495634_0030342
578 Ga0495635_0296448
579 Ga0495657_0676764
580 Ga0495599_0007024
581 Ga0495599_0128875
582 Ga0495623_0010626
583 Ga0495623_0162406
584 Ga0495646_0033881
585 Ga0495646_0247458
586 Ga0495669_0625294
587 Ga0495613_0034730
588 Ga0495613_0354115
589 Ga0495613_0528203
590 Ga0495613_0652144
591 Ga0495624_0682612
592 Ga0495671_0605917
593 Ga0495600_0172291
594 Ga0495600_0244641
595 Ga0495600_0347512
596 Ga0495581_0484222
597 Ga0495581_0667348
598 Ga0495604_0111213
599 Ga0495604_0468200
600 Ga0495674_0010205
601 Ga0495674_0064633
602 Ga0495674_0099381
603 Ga0495674_0354997
604 Ga0495674_1136114
605 Ga0495680_0027404
606 Ga0495680_0231916
607 Ga0495675_0059619
608 Ga0495675_0067525
609 Ga0495675_0083162
610 Ga0495675_0715124
611 Ga0495684_0020970
612 Ga0495684_0076937
613 Ga0495684_0197271
614 Ga0495684_0280984
615 Ga0495602_0096954
616 Ga0495602_0746268
617 Ga0495602_0797544
618 Ga0495602_0911635
619 Ga0496106_0451354
620 Ga0496109_0926555
621 Ga0496112_0265355
622 Ga0501048_0830641
623 Ga0501198_154406
624 nmdc:mga03n38_214766_c1
625 nmdc:mga00v17_167625_c1
626 nmdc:mga00v17_402998_c1
627 nmdc:mga06z11_268022_c1
628 nmdc:mga06z11_38317_c1
629 nmdc:mga05p37_116647_c1
630 nmdc:mga05p37_1312676_c1
631 nmdc:mga05p37_19451_c1
632 nmdc:mga09592_1260333_c1
633 nmdc:mga0qj67_119579_c1
634 nmdc:mga06r32_90953_c1
635 nmdc:mga0n895_114532_c1
636 nmdc:mga0n895_66819_c1
637 nmdc:mga0n895_682247_c1
638 nmdc:mga0n895_99345_c1
639 nmdc:mga0rr50_1075301_c1
640 nmdc:mga0rr50_22935_c1
641 nmdc:mga0rr50_28551_c1
642 nmdc:mga0rr50_953490_c1
643 nmdc:mga08x19_106713_c1
644 nmdc:mga08x19_199652_c1
645 nmdc:mga0a205_61429_c1
646 nmdc:mga0a205_70433_c1
647 Ga0500592_005985
648 Ga0500658_0186465
649 Ga0500616_0000718
650 Ga0500645_000154
651 Ga0590071_000417
652 Ga0590075_000136
653 Ga0590075_017779
654 Ga0590075_199277

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03551

PadR

Transcriptional regulator PadR-like family

27

104

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zhv-assembly1.cif.gz_B crystal structure of the padr-family transcriptional regulator rv3488 of mycobacterium tuberculosis h37rv in complex with zinc ion 0.8638 18 88
6abt-assembly1.cif.gz_A crystal structure of transcription factor from listeria monocytogenes 0.8411 18 92
7q34-assembly2.cif.gz_C crystal structure of the multidrug binding transcriptional regulator lmrr in complex squaraine dye 0.7932 17 96
7q34-assembly1.cif.gz_A crystal structure of the multidrug binding transcriptional regulator lmrr in complex squaraine dye 0.7896 17 92
3f8b-assembly1.cif.gz_A-2 crystal structure of the multidrug binding transcriptional regulator lmrr in drug free state 0.7894 17 96
ID Description Score Start End Superfamily
af_Q9VP79_118_196_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8304 14 70 1.10.10.10
5y8tC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8122 15 78 1.10.10.10
af_Q2FV75_68_159_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8037 15 58 1.10.10.10
5y8tA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7867 18 78 1.10.10.10
af_O50432_1_88_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.7721 15 77 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0U2P2Y3-F1-model_v4 Winged helix-turn-helix DNA-binding protein 0.9711 1 62 GO:0003677
AF-A0A1A8ZMQ0-F1-model_v4 Transcriptional regulator PadR-like family protein 0.9711 13 93
AF-A0A645BPI9-F1-model_v4 Transcription regulator PadR N-terminal domain-containing protein 0.9628 13 95
AF-A0A317CYS0-F1-model_v4 PadR family transcriptional regulator 0.9621 14 93
AF-A0A2E1AK80-F1-model_v4 PadR family transcriptional regulator 0.9608 8 92

Map