F408986

General Info

Members Datasets Scaffolds Average Seq Length
327 214 312 326

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_3519_c1|nmdc:mga0n895_3519_c1_9714_10850
Length 378
Sequence MDGDRIIPASGKRHSGDRNTEFRQAESMGFLLAAGRITAIMVGTITSRRLAMRPQQLSRLRFALLPLALLAAASTGFAQPYPSNNIRIVVAGASGTPPDIITRIVANEVAQSEGWRLIVEDKPGAMQTLGAAEVLKQPADGYSVLGISLSSVAAPFLLPHVSFQLDRDFIPLVKVATAYHVLVVHPGVPANSLPELAALIRKNPDKLTFSSGGFGTPAHLAGELFKLQAGLRATHVPYQAFPQAIADLLNGTNQYQFITPLPVLDLIATGKLRPLAVTAPSRMPALPDVPTVGEQGFPDLIVQDYIGFLVKRGTPDEIVMRLNGAVNRALAKPNVREAFAKMAAEPAGGSSAEFAGFLTSQLAYWGKVIADAGMKMHE

Samples

Sample ID Description Type Environment
1 2874645413 Bradyrhizobium canariense UBMA122 Isolate Nodule
2 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
3 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
4 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
5 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
6 2935648319 Bradyrhizobium sp. JR4.3 Isolate Nodule
7 2935656913 Bradyrhizobium sp. JR5.3 Isolate Nodule
8 2936011229 Bradyrhizobium sp. JR1.1 Isolate Nodule
9 2936019824 Bradyrhizobium sp. JR1.5 Isolate Nodule
10 2936028420 Bradyrhizobium sp. JR1.7 Isolate Nodule
11 2936046547 Bradyrhizobium sp. JR3.12 Isolate Nodule
12 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
13 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
18 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
19 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
29 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
36 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
37 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
38 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
41 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
42 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
43 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
44 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
45 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
48 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
49 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
50 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
51 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
54 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
68 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
69 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
70 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
74 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
75 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
76 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
77 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
78 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
81 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
104 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
105 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
106 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
107 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
108 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
109 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
110 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
111 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
112 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
113 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
115 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
123 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
124 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
125 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
126 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
127 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
128 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
129 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
130 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
131 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
132 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
133 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
134 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
135 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
136 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
137 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
140 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
143 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
144 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
145 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
146 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
147 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
148 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
149 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
150 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
151 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
152 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
153 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
154 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
155 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
156 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
157 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
158 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
159 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
160 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
161 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
162 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
163 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
164 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
165 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
166 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
167 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
168 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
169 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
170 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
171 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
172 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
173 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
174 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
175 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
176 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
177 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
178 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
179 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
180 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
181 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
182 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
183 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
184 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
185 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
186 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
187 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
188 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
189 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
191 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
192 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
193 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
194 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
195 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
196 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
197 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
198 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
199 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
200 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
201 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
202 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
203 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
204 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
205 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
206 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
207 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
208 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
209 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
210 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
211 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
212 8006964411 Bradyrhizobium sp. sBnM-33 Isolate Nodule
213 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
214 8056689827 Bradyrhizobium semiaridum WSM 1704 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 95.41
Metatranscriptomes 0
Isolates 4.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.45
Nodule 3.98
Rhizoplane 11.31
Rhizosphere 81.65
Stem 0
Stem Tuber 0
Unclassified 0.61

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10000144 3300003203 Bacteria 30886
2 JGI25405J52794_10008078 3300003911 Bacteria 1956
3 Ga0070683_100301304 3300005329 Bacteria 1525
4 Ga0070666_10155470 3300005335 Unclassified 1597
5 Ga0070680_100098486 3300005336 Unclassified 2425
6 Ga0070691_10036281 3300005341 Unclassified 2323
7 Ga0070668_100168956 3300005347 Bacteria 1779
8 Ga0070671_100121656 3300005355 Bacteria 2197
9 Ga0070674_100035185 3300005356 Bacteria 3352
10 Ga0070673_100176902 3300005364 Bacteria 1824
11 Ga0070688_100084292 3300005365 Bacteria 2064
12 Ga0070688_100120436 3300005365 Unclassified 1757
13 Ga0070667_100059318 3300005367 Plasmid 3237
14 Ga0070667_100111816 3300005367 Bacteria 2369
15 Ga0070709_10083272 3300005434 Bacteria 2092
16 Ga0070709_10148672 3300005434 Bacteria 1617
17 Ga0070700_100017083 3300005441 Bacteria 4143
18 Ga0070694_100032927 3300005444 Bacteria 3406
19 Ga0070663_100364002 3300005455 Bacteria 1174
20 Ga0070681_10008100 3300005458 Bacteria 10281
21 Ga0070681_10058858 3300005458 Bacteria 3822
22 Ga0070681_10070744 3300005458 Bacteria 3453
23 Ga0070679_100013101 3300005530 Bacteria 7940
24 Ga0070672_100113216 3300005543 Bacteria 2214
25 Ga0070665_100012082 3300005548 Bacteria 8712
26 Ga0070665_100272616 3300005548 Bacteria 1694
27 Ga0070704_100095441 3300005549 Bacteria 2227
28 Ga0068855_100212679 3300005563 Bacteria 2172
29 Ga0070664_100184500 3300005564 Bacteria 1856
30 Ga0068857_100263150 3300005577 Bacteria 1583
31 Ga0068856_100152282 3300005614 Bacteria 2322
32 Ga0070702_100062627 3300005615 Bacteria 2169
33 Ga0068859_100149262 3300005617 Bacteria 2413
34 Ga0068864_100160316 3300005618 Unclassified 2044
35 Ga0068861_100042385 3300005719 Bacteria 3411
36 Ga0068863_100291964 3300005841 Unclassified 1580
37 Ga0081455_10003645 3300005937 Bacteria 17644
38 Ga0081455_10005772 3300005937 Bacteria 13496
39 Ga0081455_10008973 3300005937 Bacteria 10328
40 Ga0081455_10009771 3300005937 Bacteria 9824
41 Ga0081455_10058571 3300005937 Bacteria 3258
42 Ga0081455_10076321 3300005937 Bacteria 2761
43 Ga0081455_10165477 3300005937 Bacteria 1690
44 Ga0081538_10007110 3300005981 Bacteria 9723
45 Ga0081538_10020531 3300005981 Bacteria 4855
46 Ga0081540_1000065 3300005983 Bacteria 116905
47 Ga0081540_1000112 3300005983 Bacteria 86810
48 Ga0081540_1032042 3300005983 Bacteria 2876
49 Ga0081539_10000616 3300005985 Bacteria 72108
50 Ga0081539_10013219 3300005985 Bacteria 6244
51 Ga0070717_10127705 3300006028 Bacteria 2184
52 Ga0075365_10121154 3300006038 Bacteria 1805
53 Ga0075362_10041960 3300006177 Bacteria 2020
54 Ga0075367_10148972 3300006178 Bacteria 1452
55 Ga0075366_10001342 3300006195 Bacteria 12294
56 Ga0075428_100031926 3300006844 Bacteria 5819
57 Ga0075428_100056118 3300006844 Bacteria 4315
58 Ga0075428_100084173 3300006844 Bacteria 3470
59 Ga0075428_100106743 3300006844 Bacteria 3052
60 Ga0075428_100114045 3300006844 Bacteria 2944
61 Ga0075428_100164374 3300006844 Bacteria 2408
62 Ga0075428_100272170 3300006844 Bacteria 1822
63 Ga0075430_100047917 3300006846 Bacteria 3608
64 Ga0075430_100215741 3300006846 Unclassified 1592
65 Ga0075431_100000057 3300006847 Bacteria 62693
66 Ga0075431_100000771 3300006847 Bacteria 27793
67 Ga0075431_100044982 3300006847 Bacteria 4551
68 Ga0075431_100058611 3300006847 Bacteria 3974
69 Ga0075431_100059235 3300006847 Bacteria 3952
70 Ga0075431_100364645 3300006847 Bacteria 1451
71 Ga0075434_100001504 3300006871 Bacteria 19693
72 Ga0075429_100000754 3300006880 Bacteria 25411
73 Ga0097620_100149280 3300006931 Bacteria 2413
74 Ga0075435_100135730 3300007076 Bacteria 2061
75 Ga0099795_10041913 3300007788 Bacteria 1632
76 Ga0105240_10047269 3300009093 Bacteria 5446
77 Ga0111539_10002564 3300009094 Bacteria 24056
78 Ga0111539_10184512 3300009094 Bacteria 2437
79 Ga0111539_10383090 3300009094 Bacteria 1637
80 Ga0111539_10395307 3300009094 Bacteria 1610
81 Ga0105245_10000947 3300009098 Bacteria 26402
82 Ga0105247_10047979 3300009101 Bacteria 2623
83 Ga0105247_10192409 3300009101 Unclassified 1366
84 Ga0114129_10001100 3300009147 Bacteria 35529
85 Ga0114129_10001669 3300009147 Bacteria 30222
86 Ga0114129_10022655 3300009147 Bacteria 8909
87 Ga0114129_10033196 3300009147 Bacteria 7294
88 Ga0114129_10037461 3300009147 Bacteria 6846
89 Ga0105243_10035633 3300009148 Bacteria 3859
90 Ga0105242_10096107 3300009176 Bacteria 2502
91 Ga0105248_10373926 3300009177 Bacteria 1604
92 Ga0105248_10445246 3300009177 Bacteria 1459
93 Ga0105237_10117107 3300009545 Bacteria 2658
94 Ga0105238_10357129 3300009551 Bacteria 1450
95 Ga0105249_10067902 3300009553 Bacteria 3286
96 Ga0105239_10522258 3300010375 Bacteria 1351
97 Ga0105246_10016985 3300011119 Bacteria 4620
98 Ga0105246_10079502 3300011119 Bacteria 2332
99 Ga0157370_10016655 3300013104 Bacteria 7438
100 Ga0163162_10161720 3300013306 Bacteria 2361
101 Ga0163162_10264307 3300013306 Bacteria 1852
102 Ga0157375_10073990 3300013308 Bacteria 3427
103 Ga0157375_10248565 3300013308 Bacteria 1939
104 Ga0163163_10063139 3300014325 Bacteria 3672
105 Ga0163163_10065753 3300014325 Bacteria 3601
106 Ga0163163_10091975 3300014325 Unclassified 3048
107 Ga0157380_10070225 3300014326 Unclassified 2829
108 Ga0157377_10207438 3300014745 Bacteria 1248
109 Ga0157376_10032742 3300014969 Bacteria 4176
110 Ga0157376_10213487 3300014969 Bacteria 1783
111 Ga0163161_10085979 3300017792 Bacteria 2321
112 Ga0163161_10202803 3300017792 Bacteria 1529
113 Ga0207688_10023186 3300025901 Bacteria 3398
114 Ga0207699_10229304 3300025906 Bacteria 1271
115 Ga0207707_10019600 3300025912 Bacteria 5903
116 Ga0207707_10046545 3300025912 Bacteria 3779
117 Ga0207707_10212011 3300025912 Bacteria 1687
118 Ga0207695_10081142 3300025913 Bacteria 3283
119 Ga0207694_10237955 3300025924 Bacteria 1488
120 Ga0207650_10002774 3300025925 Bacteria 12100
121 Ga0207650_10097383 3300025925 Unclassified 2258
122 Ga0207687_10019701 3300025927 Bacteria 4472
123 Ga0207644_10297858 3300025931 Bacteria 1299
124 Ga0207691_10055325 3300025940 Bacteria 3617
125 Ga0207689_10058410 3300025942 Bacteria 3173
126 Ga0207667_10048082 3300025949 Bacteria 4512
127 Ga0207651_10013611 3300025960 Bacteria 4662
128 Ga0207640_10249808 3300025981 Unclassified 1376
129 Ga0207658_10141421 3300025986 Bacteria 1948
130 Ga0207678_10065196 3300026067 Bacteria 3128
131 Ga0207678_10244404 3300026067 Bacteria 1537
132 Ga0207708_10031310 3300026075 Bacteria 4037
133 Ga0207702_10053005 3300026078 Bacteria 3434
134 Ga0207641_10059219 3300026088 Unclassified 3261
135 Ga0207675_100010629 3300026118 Bacteria 8622
136 Ga0207683_10403652 3300026121 Bacteria 1257
137 Ga0207428_10031490 3300027907 Bacteria 4373
138 Ga0268266_10014745 3300028379 Bacteria 6713
139 Ga0307413_10351675 3300031824 Bacteria 1137
140 Ga0307407_10144208 3300031903 Bacteria 1540
141 Ga0307411_10254449 3300032005 Bacteria 1383
142 Ga0373923_0001590 3300035111 Bacteria 6598
143 Ga0373936_0000578 3300035113 Bacteria 12619
144 Ga0373936_0092504 3300035113 Bacteria 1269
145 Ga0373945_0002984 3300035116 Bacteria 5316
146 Ga0373957_0003731 3300035120 Bacteria 4555
147 Ga0373943_0002688 3300035170 Bacteria 8079
148 Ga0373943_0171498 3300035170 Bacteria 1187
149 Ga0373946_0000260 3300035171 Bacteria 16791
150 Ga0373946_0017539 3300035171 Bacteria 2740
151 Ga0373955_0005160 3300035172 Bacteria 5843
152 Ga0373924_0000867 3300035410 Bacteria 9516
153 Ga0373931_0060946 3300035691 Bacteria 2033
154 Ga0373935_0000299 3300035692 Bacteria 24552
155 Ga0373935_0159967 3300035692 Bacteria 1534
156 Ga0373927_0014204 3300035695 Bacteria 5280
157 Ga0373927_0081263 3300035695 Bacteria 2100
158 Ga0373933_0006904 3300035724 Bacteria 6186
159 Ga0373947_0001912 3300035725 Bacteria 12737
160 Ga0373947_0052445 3300035725 Bacteria 2457
161 Ga0373947_0062831 3300035725 Bacteria 2261
162 Ga0373947_0157544 3300035725 Bacteria 1466
163 Ga0373937_0000005 3300036401 Bacteria 199965
164 Ga0373925_0000007 3300037068 Bacteria 257023
165 Ga0373925_0050965 3300037068 Bacteria 3089
166 Ga0395901_0167434 3300038443 Bacteria 2307
167 Ga0466964_0038840 3300044706 Bacteria 1916
168 Ga0466968_0012056 3300044735 Bacteria 3377
169 Ga0466967_0511358 3300045976 Bacteria 1179
170 Ga0495592_0000218 3300046454 Bacteria 49259
171 Ga0495603_0049237 3300046455 Bacteria 2508
172 Ga0495629_0193736 3300046459 Bacteria 1406
173 Ga0495629_0231615 3300046459 Bacteria 1273
174 Ga0495638_0020635 3300046460 Bacteria 4351
175 Ga0495651_0000435 3300046462 Bacteria 32200
176 Ga0495653_0000034 3300046463 Bacteria 131084
177 Ga0495582_0216533 3300046473 Bacteria 1095
178 Ga0495605_0014091 3300046474 Plasmid 4386
179 Ga0495639_0040488 3300046475 Bacteria 2096
180 Ga0495662_0020402 3300046476 Bacteria 3205
181 Ga0495664_0000003 3300046477 Bacteria 551602
182 Ga0495584_0102935 3300046491 Bacteria 1444
183 Ga0495608_0000110 3300046511 Bacteria 58344
184 Ga0495616_0097268 3300046513 Bacteria 1385
185 Ga0495618_0000018 3300046514 Bacteria 139407
186 Ga0495628_0000001 3300046516 Bacteria 917742
187 Ga0495628_0301706 3300046516 Bacteria 1185
188 Ga0495630_0008828 3300046517 Bacteria 7236
189 Ga0495631_0046875 3300046518 Bacteria 1899
190 Ga0495637_0066801 3300046520 Bacteria 1461
191 Ga0495652_0000006 3300046529 Bacteria 459709
192 Ga0495665_0052274 3300046531 Bacteria 2163
193 Ga0495640_0000002 3300046533 Bacteria 646434
194 Ga0495640_0039893 3300046533 Bacteria 3292
195 Ga0495640_0046563 3300046533 Bacteria 3005
196 Ga0495586_0051521 3300046535 Bacteria 2228
197 Ga0495587_0000001 3300046536 Bacteria 724132
198 Ga0495598_0000806 3300046537 Bacteria 5996
199 Ga0495598_0064766 3300046537 Bacteria 1136
200 Ga0495621_0015817 3300046539 Bacteria 2412
201 Ga0495645_0000009 3300046543 Bacteria 239632
202 Ga0495667_0000004 3300046559 Bacteria 295297
203 Ga0495656_0115976 3300046615 Bacteria 1259
204 Ga0495634_0000014 3300046642 Bacteria 128091
205 Ga0495635_0000001 3300046663 Bacteria 704901
206 Ga0495657_0000107 3300046675 Bacteria 74571
207 Ga0495599_0000053 3300046678 Bacteria 80559
208 Ga0495623_0000018 3300046679 Bacteria 107338
209 Ga0495646_0000020 3300046680 Bacteria 117021
210 Ga0495658_0031328 3300046683 Bacteria 2896
211 Ga0495658_0145170 3300046683 Bacteria 1453
212 Ga0495669_0041795 3300046684 Bacteria 2037
213 Ga0495613_0054934 3300046689 Bacteria 2927
214 Ga0495613_0065273 3300046689 Bacteria 2660
215 Ga0495624_0005493 3300046690 Bacteria 9127
216 Ga0495624_0101519 3300046690 Bacteria 1771
217 Ga0495671_0132789 3300046692 Bacteria 1214
218 Ga0495589_0028191 3300046794 Bacteria 2835
219 Ga0495589_0145982 3300046794 Bacteria 1131
220 Ga0495600_0000025 3300046809 Bacteria 92167
221 Ga0495604_0000008 3300047317 Bacteria 341160
222 Ga0495674_0000016 3300047319 Bacteria 216763
223 Ga0495674_0336300 3300047319 Bacteria 1228
224 Ga0495676_0051704 3300047321 Bacteria 3285
225 Ga0495680_0000146 3300047322 Bacteria 70936
226 Ga0495675_0000045 3300047444 Bacteria 82813
227 Ga0495684_0000002 3300047471 Bacteria 341216
228 Ga0495593_0000813 3300047673 Bacteria 18066
229 Ga0495593_0107370 3300047673 Bacteria 1427
230 Ga0495602_0000022 3300048088 Bacteria 163672
231 Ga0496100_0037757 3300048903 Bacteria 3056
232 Ga0496102_0142649 3300048905 Bacteria 2247
233 Ga0496102_0535557 3300048905 Bacteria 1094
234 Ga0496103_0005229 3300048906 Bacteria 7796
235 Ga0496103_0086964 3300048906 Bacteria 1970
236 Ga0496104_0003330 3300048907 Bacteria 13866
237 Ga0496104_0004964 3300048907 Bacteria 11614
238 Ga0496104_0009744 3300048907 Bacteria 8564
239 Ga0496104_0123216 3300048907 Bacteria 2489
240 Ga0496104_0162279 3300048907 Bacteria 2143
241 Ga0496104_0362736 3300048907 Bacteria 1361
242 Ga0496104_0376018 3300048907 Bacteria 1333
243 Ga0496105_0001298 3300048908 Bacteria 17483
244 Ga0496105_0350122 3300048908 Bacteria 1180
245 Ga0496106_0010785 3300048909 Bacteria 6754
246 Ga0496106_0260660 3300048909 Bacteria 1387
247 Ga0496108_0007626 3300048911 Bacteria 8765
248 Ga0496108_0093836 3300048911 Bacteria 2553
249 Ga0496109_0001689 3300048912 Bacteria 18384
250 Ga0496109_0126263 3300048912 Bacteria 2385
251 Ga0496110_0045958 3300048913 Bacteria 3818
252 Ga0496110_0129770 3300048913 Bacteria 2275
253 Ga0496111_0017027 3300048914 Bacteria 5017
254 Ga0496111_0236881 3300048914 Bacteria 1355
255 Ga0496112_0017391 3300048915 Bacteria 6753
256 Ga0496112_0098515 3300048915 Bacteria 2893
257 Ga0496112_0131518 3300048915 Bacteria 2473
258 Ga0496113_0002336 3300048916 Bacteria 10968
259 Ga0496113_0110418 3300048916 Bacteria 2140
260 Ga0496113_0159187 3300048916 Bacteria 1784
261 Ga0496113_0283042 3300048916 Bacteria 1326
262 Ga0496114_0034696 3300048917 Bacteria 4163
263 Ga0496114_0098800 3300048917 Bacteria 2489
264 Ga0496114_0252561 3300048917 Bacteria 1552
265 Ga0496115_0023711 3300048918 Bacteria 4763
266 Ga0496115_0060117 3300048918 Bacteria 3061
267 Ga0496115_0205673 3300048918 Bacteria 1626
268 Ga0501040_0171062 3300049576 Bacteria 1538
269 Ga0501070_0267143 3300049586 Bacteria 1398
270 Ga0501071_0026959 3300049587 Bacteria 4039
271 Ga0501072_0004336 3300049588 Bacteria 10769
272 Ga0501075_0207978 3300049591 Bacteria 1493
273 Ga0501076_0038231 3300049592 Bacteria 3768
274 Ga0501076_0105692 3300049592 Bacteria 2272
275 Ga0501076_0125699 3300049592 Bacteria 2078
276 Ga0501076_0453536 3300049592 Unclassified 1056
277 nmdc:mga03683_9840_c1 3300050489 Bacteria 3412
278 nmdc:mga03n38_56129_c1 3300050490 Bacteria 1776
279 nmdc:mga0yw44_77137_c1 3300050492 Bacteria 2081
280 nmdc:mga0k408_2577_c1 3300050493 Bacteria 9620
281 nmdc:mga05p37_123350_c1 3300050507 Bacteria 3182
282 nmdc:mga05p37_228_c1 3300050507 Bacteria 56943
283 nmdc:mga05p37_26660_c1 3300050507 Bacteria 7027
284 nmdc:mga05p37_44555_c1 3300050507 Bacteria 5458
285 nmdc:mga05p37_761588_c1 3300050507 Bacteria 1065
286 nmdc:mga05p37_88368_c1 3300050507 Bacteria 3820
287 nmdc:mga09592_1367_c1 3300050508 Bacteria 17860
288 nmdc:mga09592_450294_c1 3300050508 Bacteria 1111
289 nmdc:mga09592_9987_c1 3300050508 Bacteria 7720
290 nmdc:mga0qj67_21108_c1 3300050509 Bacteria 4993
291 nmdc:mga0qj67_33750_c1 3300050509 Bacteria 3994
292 nmdc:mga0qj67_366017_c1 3300050509 Bacteria 1165
293 nmdc:mga0qj67_391403_c1 3300050509 Bacteria 1122
294 nmdc:mga06r32_1267_c1 3300050510 Bacteria 22709
295 nmdc:mga06r32_145_c1 3300050510 Bacteria 53373
296 nmdc:mga06r32_356394_c1 3300050510 Unclassified 1447
297 nmdc:mga06r32_44227_c1 3300050510 Bacteria 4240
298 nmdc:mga06r32_55382_c1 3300050510 Bacteria 3804
299 nmdc:mga08y16_1363_c1 3300050511 Bacteria 24406
300 nmdc:mga08y16_323309_c1 3300050511 Bacteria 1588
301 nmdc:mga0n895_32188_c1 3300050512 Bacteria 5031
302 nmdc:mga0n895_3519_c1 3300050512 Bacteria 12656
303 Ga0495601_0000001 3300053077 Bacteria 549454
304 Ga0495601_0076791 3300053077 Bacteria 2139
305 Ga0495601_0162667 3300053077 Bacteria 1459
306 Ga0495612_0000003 3300053078 Bacteria 303629
307 Ga0495595_0000105 3300053084 Bacteria 38352
308 Ga0495619_0000004 3300053085 Bacteria 500068
309 Ga0495619_0112023 3300053085 Bacteria 1865
310 Ga0501084_0120697 3300054114 Bacteria 2204
311 Ga0501082_0181658 3300060353 Bacteria 1830
312 Ga0530510_0051661 3300061734 Bacteria 2971

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046459 Ga0495629_0231615 Ga0495629_0231615_29_901 262
2 3300050490 nmdc:mga03n38_56129_c1 nmdc:mga03n38_56129_c1_17_967 262
3 3300006195 Ga0075366_10001342 Ga0075366_100013426 263
4 3300035171 Ga0373946_0017539 Ga0373946_0017539_1847_2725 264
5 3300048907 Ga0496104_0004964 Ga0496104_0004964_7776_8651 264
6 3300049592 Ga0501076_0453536 Ga0501076_0453536_20_907 266
7 3300050493 nmdc:mga0k408_2577_c1 nmdc:mga0k408_2577_c1_8149_9186 266
8 3300050508 nmdc:mga09592_450294_c1 nmdc:mga09592_450294_c1_25_909 266
9 3300005937 Ga0081455_10003645 Ga0081455_100036456 272
10 3300005937 Ga0081455_10076321 Ga0081455_100763213 275
11 3300054114 Ga0501084_0120697 Ga0501084_0120697_645_1631 275
12 3300048905 Ga0496102_0142649 Ga0496102_0142649_1251_2210 277
13 3300005985 Ga0081539_10013219 Ga0081539_1001321910 278
14 3300048905 Ga0496102_0535557 Ga0496102_0535557_19_939 278
15 3300007788 Ga0099795_10041913 Ga0099795_100419132 279
16 3300005355 Ga0070671_100121656 Ga0070671_1001216562 280
17 3300005367 Ga0070667_100111816 Ga0070667_1001118162 280
18 3300025931 Ga0207644_10297858 Ga0207644_102978582 280
19 3300025986 Ga0207658_10141421 Ga0207658_101414212 280
20 3300046516 Ga0495628_0301706 Ga0495628_0301706_15_941 280
21 3300009094 Ga0111539_10002564 Ga0111539_1000256425 281
22 3300050508 nmdc:mga09592_9987_c1 nmdc:mga09592_9987_c1_14_943 281
23 3300005335 Ga0070666_10155470 Ga0070666_101554702 284
24 3300005364 Ga0070673_100176902 Ga0070673_1001769021 284
25 3300005365 Ga0070688_100120436 Ga0070688_1001204362 284
26 3300005543 Ga0070672_100113216 Ga0070672_1001132162 284
27 3300005617 Ga0068859_100149262 Ga0068859_1001492623 284
28 3300005618 Ga0068864_100160316 Ga0068864_1001603162 284
29 3300005841 Ga0068863_100291964 Ga0068863_1002919641 284
30 3300006931 Ga0097620_100149280 Ga0097620_1001492802 284
31 3300009101 Ga0105247_10192409 Ga0105247_101924092 284
32 3300009551 Ga0105238_10357129 Ga0105238_103571292 284
33 3300014325 Ga0163163_10091975 Ga0163163_100919753 284
34 3300014326 Ga0157380_10070225 Ga0157380_100702252 284
35 3300025924 Ga0207694_10237955 Ga0207694_102379552 284
36 3300025925 Ga0207650_10097383 Ga0207650_100973832 284
37 3300025940 Ga0207691_10055325 Ga0207691_100553252 284
38 3300025942 Ga0207689_10058410 Ga0207689_100584103 284
39 3300025960 Ga0207651_10013611 Ga0207651_100136114 284
40 3300026088 Ga0207641_10059219 Ga0207641_100592192 284
41 3300045976 Ga0466967_0511358 Ga0466967_0511358_163_1155 284
42 3300046460 Ga0495638_0020635 Ga0495638_0020635_1517_2455 284
43 3300046474 Ga0495605_0014091 Ga0495605_0014091_1579_2562 284
44 3300046518 Ga0495631_0046875 Ga0495631_0046875_770_1708 284
45 3300046537 Ga0495598_0064766 Ga0495598_0064766_70_1053 284
46 3300046684 Ga0495669_0041795 Ga0495669_0041795_739_1677 284
47 3300046692 Ga0495671_0132789 Ga0495671_0132789_179_1117 284
48 3300046794 Ga0495589_0145982 Ga0495589_0145982_123_1061 284
49 3300053077 Ga0495601_0076791 Ga0495601_0076791_1112_2074 284
50 3300038443 Ga0395901_0167434 Ga0395901_0167434_975_1976 285
51 3300044735 Ga0466968_0012056 Ga0466968_0012056_238_1179 285
52 3300005434 Ga0070709_10148672 Ga0070709_101486722 286
53 3300005937 Ga0081455_10005772 Ga0081455_100057723 286
54 3300005937 Ga0081455_10165477 Ga0081455_101654771 286
55 3300005981 Ga0081538_10007110 Ga0081538_100071109 286
56 3300006844 Ga0075428_100164374 Ga0075428_1001643742 286
57 3300035695 Ga0373927_0081263 Ga0373927_0081263_216_1202 286
58 3300035725 Ga0373947_0052445 Ga0373947_0052445_688_1674 286
59 3300037068 Ga0373925_0050965 Ga0373925_0050965_634_1620 286
60 3300048918 Ga0496115_0023711 Ga0496115_0023711_19_987 286
61 3300005341 Ga0070691_10036281 Ga0070691_100362812 287
62 3300005347 Ga0070668_100168956 Ga0070668_1001689562 287
63 3300005434 Ga0070709_10083272 Ga0070709_100832722 287
64 3300005441 Ga0070700_100017083 Ga0070700_1000170832 287
65 3300005444 Ga0070694_100032927 Ga0070694_1000329271 287
66 3300005455 Ga0070663_100364002 Ga0070663_1003640021 287
67 3300005458 Ga0070681_10058858 Ga0070681_100588583 287
68 3300005549 Ga0070704_100095441 Ga0070704_1000954413 287
69 3300005719 Ga0068861_100042385 Ga0068861_1000423851 287
70 3300005983 Ga0081540_1000112 Ga0081540_100011281 287
71 3300006028 Ga0070717_10127705 Ga0070717_101277051 287
72 3300006038 Ga0075365_10121154 Ga0075365_101211541 287
73 3300006844 Ga0075428_100056118 Ga0075428_1000561186 287
74 3300006844 Ga0075428_100106743 Ga0075428_1001067433 287
75 3300006846 Ga0075430_100047917 Ga0075430_1000479174 287
76 3300006846 Ga0075430_100215741 Ga0075430_1002157412 287
77 3300006847 Ga0075431_100000057 Ga0075431_10000005748 287
78 3300006847 Ga0075431_100000771 Ga0075431_10000077131 287
79 3300006847 Ga0075431_100058611 Ga0075431_1000586113 287
80 3300006847 Ga0075431_100059235 Ga0075431_1000592352 287
81 3300006880 Ga0075429_100000754 Ga0075429_10000075421 287
82 3300009147 Ga0114129_10001100 Ga0114129_100011005 287
83 3300009147 Ga0114129_10033196 Ga0114129_100331967 287
84 3300009177 Ga0105248_10445246 Ga0105248_104452462 287
85 3300010375 Ga0105239_10522258 Ga0105239_105222581 287
86 3300011119 Ga0105246_10079502 Ga0105246_100795022 287
87 3300013306 Ga0163162_10161720 Ga0163162_101617202 287
88 3300013308 Ga0157375_10248565 Ga0157375_102485652 287
89 3300014745 Ga0157377_10207438 Ga0157377_102074381 287
90 3300014969 Ga0157376_10213487 Ga0157376_102134873 287
91 3300017792 Ga0163161_10202803 Ga0163161_102028032 287
92 3300025906 Ga0207699_10229304 Ga0207699_102293041 287
93 3300025912 Ga0207707_10212011 Ga0207707_102120112 287
94 3300026067 Ga0207678_10244404 Ga0207678_102444042 287
95 3300026075 Ga0207708_10031310 Ga0207708_100313105 287
96 3300026118 Ga0207675_100010629 Ga0207675_1000106295 287
97 3300026121 Ga0207683_10403652 Ga0207683_104036521 287
98 3300027907 Ga0207428_10031490 Ga0207428_100314904 287
99 3300044706 Ga0466964_0038840 Ga0466964_0038840_731_1720 287
100 3300048907 Ga0496104_0123216 Ga0496104_0123216_1431_2414 287
101 3300048907 Ga0496104_0376018 Ga0496104_0376018_113_1102 287
102 3300048908 Ga0496105_0350122 Ga0496105_0350122_185_1168 287
103 3300048915 Ga0496112_0017391 Ga0496112_0017391_1824_2807 287
104 3300048915 Ga0496112_0098515 Ga0496112_0098515_1456_2445 287
105 3300048916 Ga0496113_0110418 Ga0496113_0110418_152_1135 287
106 3300048916 Ga0496113_0283042 Ga0496113_0283042_121_1110 287
107 3300048917 Ga0496114_0252561 Ga0496114_0252561_159_1142 287
108 3300049576 Ga0501040_0171062 Ga0501040_0171062_128_1093 287
109 3300049591 Ga0501075_0207978 Ga0501075_0207978_170_1159 287
110 3300049592 Ga0501076_0105692 Ga0501076_0105692_181_1146 287
111 3300049592 Ga0501076_0125699 Ga0501076_0125699_846_1826 287
112 3300050492 nmdc:mga0yw44_77137_c1 nmdc:mga0yw44_77137_c1_182_1174 287
113 3300050507 nmdc:mga05p37_123350_c1 nmdc:mga05p37_123350_c1_708_1733 287
114 3300050507 nmdc:mga05p37_228_c1 nmdc:mga05p37_228_c1_22696_23700 287
115 3300050507 nmdc:mga05p37_761588_c1 nmdc:mga05p37_761588_c1_13_1005 287
116 3300050508 nmdc:mga09592_1367_c1 nmdc:mga09592_1367_c1_1515_2519 287
117 3300050509 nmdc:mga0qj67_21108_c1 nmdc:mga0qj67_21108_c1_182_1186 287
118 3300050509 nmdc:mga0qj67_33750_c1 nmdc:mga0qj67_33750_c1_1664_2689 287
119 3300050510 nmdc:mga06r32_145_c1 nmdc:mga06r32_145_c1_21540_22544 287
120 3300050510 nmdc:mga06r32_55382_c1 nmdc:mga06r32_55382_c1_348_1373 287
121 3300050511 nmdc:mga08y16_1363_c1 nmdc:mga08y16_1363_c1_1202_2206 287
122 iso_pu_bacteria 2874645413 2874645662 287
123 iso_pu_bacteria 2922361189 2922368401 287
124 iso_pu_bacteria 2922386360 2922387823 287
125 iso_pu_bacteria 2935648319 2935651931 287
126 iso_pu_bacteria 2935656913 2935660741 287
127 iso_pu_bacteria 2936011229 2936014797 287
128 iso_pu_bacteria 2936019824 2936023406 287
129 iso_pu_bacteria 2936028420 2936032434 287
130 iso_pu_bacteria 2936046547 2936050538 287
131 iso_pu_bacteria 2936055302 2936058970 287
132 iso_pu_bacteria 8006984368 8006992578 287
133 iso_pu_bacteria 8056689827 8056695979 287
134 3300005329 Ga0070683_100301304 Ga0070683_1003013042 288
135 3300005336 Ga0070680_100098486 Ga0070680_1000984862 288
136 3300005356 Ga0070674_100035185 Ga0070674_1000351852 288
137 3300005365 Ga0070688_100084292 Ga0070688_1000842922 288
138 3300005458 Ga0070681_10008100 Ga0070681_100081009 288
139 3300005458 Ga0070681_10070744 Ga0070681_100707442 288
140 3300005530 Ga0070679_100013101 Ga0070679_1000131019 288
141 3300005548 Ga0070665_100012082 Ga0070665_1000120828 288
142 3300005548 Ga0070665_100272616 Ga0070665_1002726161 288
143 3300005563 Ga0068855_100212679 Ga0068855_1002126793 288
144 3300005564 Ga0070664_100184500 Ga0070664_1001845001 288
145 3300005577 Ga0068857_100263150 Ga0068857_1002631502 288
146 3300005614 Ga0068856_100152282 Ga0068856_1001522821 288
147 3300005615 Ga0070702_100062627 Ga0070702_1000626272 288
148 3300005937 Ga0081455_10058571 Ga0081455_100585712 288
149 3300005981 Ga0081538_10020531 Ga0081538_100205317 288
150 3300005983 Ga0081540_1032042 Ga0081540_10320423 288
151 3300006178 Ga0075367_10148972 Ga0075367_101489722 288
152 3300006844 Ga0075428_100031926 Ga0075428_1000319267 288
153 3300006844 Ga0075428_100084173 Ga0075428_1000841732 288
154 3300006844 Ga0075428_100272170 Ga0075428_1002721702 288
155 3300006847 Ga0075431_100044982 Ga0075431_1000449823 288
156 3300006847 Ga0075431_100364645 Ga0075431_1003646451 288
157 3300006871 Ga0075434_100001504 Ga0075434_10000150419 288
158 3300007076 Ga0075435_100135730 Ga0075435_1001357302 288
159 3300009093 Ga0105240_10047269 Ga0105240_100472695 288
160 3300009094 Ga0111539_10184512 Ga0111539_101845122 288
161 3300009094 Ga0111539_10383090 Ga0111539_103830902 288
162 3300009101 Ga0105247_10047979 Ga0105247_100479792 288
163 3300009147 Ga0114129_10001669 Ga0114129_100016693 288
164 3300009147 Ga0114129_10022655 Ga0114129_100226558 288
165 3300009147 Ga0114129_10037461 Ga0114129_100374616 288
166 3300009148 Ga0105243_10035633 Ga0105243_100356332 288
167 3300009176 Ga0105242_10096107 Ga0105242_100961072 288
168 3300009177 Ga0105248_10373926 Ga0105248_103739261 288
169 3300009545 Ga0105237_10117107 Ga0105237_101171072 288
170 3300009553 Ga0105249_10067902 Ga0105249_100679022 288
171 3300011119 Ga0105246_10016985 Ga0105246_100169853 288
172 3300013104 Ga0157370_10016655 Ga0157370_100166555 288
173 3300013306 Ga0163162_10264307 Ga0163162_102643073 288
174 3300013308 Ga0157375_10073990 Ga0157375_100739903 288
175 3300014325 Ga0163163_10063139 Ga0163163_100631392 288
176 3300014325 Ga0163163_10065753 Ga0163163_100657533 288
177 3300014969 Ga0157376_10032742 Ga0157376_100327421 288
178 3300017792 Ga0163161_10085979 Ga0163161_100859792 288
179 3300025901 Ga0207688_10023186 Ga0207688_100231862 288
180 3300025912 Ga0207707_10019600 Ga0207707_100196005 288
181 3300025912 Ga0207707_10046545 Ga0207707_100465453 288
182 3300025913 Ga0207695_10081142 Ga0207695_100811423 288
183 3300025925 Ga0207650_10002774 Ga0207650_100027749 288
184 3300025949 Ga0207667_10048082 Ga0207667_100480825 288
185 3300026067 Ga0207678_10065196 Ga0207678_100651963 288
186 3300026078 Ga0207702_10053005 Ga0207702_100530052 288
187 3300028379 Ga0268266_10014745 Ga0268266_100147453 288
188 3300031824 Ga0307413_10351675 Ga0307413_103516751 288
189 3300031903 Ga0307407_10144208 Ga0307407_101442082 288
190 3300032005 Ga0307411_10254449 Ga0307411_102544491 288
191 3300035111 Ga0373923_0001590 Ga0373923_0001590_2580_3557 288
192 3300035113 Ga0373936_0000578 Ga0373936_0000578_10544_11521 288
193 3300035113 Ga0373936_0092504 Ga0373936_0092504_229_1197 288
194 3300035116 Ga0373945_0002984 Ga0373945_0002984_907_1884 288
195 3300035120 Ga0373957_0003731 Ga0373957_0003731_2138_3115 288
196 3300035170 Ga0373943_0002688 Ga0373943_0002688_3846_4823 288
197 3300035170 Ga0373943_0171498 Ga0373943_0171498_204_1172 288
198 3300035171 Ga0373946_0000260 Ga0373946_0000260_2716_3693 288
199 3300035172 Ga0373955_0005160 Ga0373955_0005160_2945_3922 288
200 3300035410 Ga0373924_0000867 Ga0373924_0000867_4605_5582 288
201 3300035691 Ga0373931_0060946 Ga0373931_0060946_680_1648 288
202 3300035692 Ga0373935_0000299 Ga0373935_0000299_10833_11810 288
203 3300035692 Ga0373935_0159967 Ga0373935_0159967_517_1485 288
204 3300035695 Ga0373927_0014204 Ga0373927_0014204_1226_2203 288
205 3300035724 Ga0373933_0006904 Ga0373933_0006904_3899_4876 288
206 3300035725 Ga0373947_0001912 Ga0373947_0001912_8874_9851 288
207 3300035725 Ga0373947_0062831 Ga0373947_0062831_345_1331 288
208 3300035725 Ga0373947_0157544 Ga0373947_0157544_355_1323 288
209 3300036401 Ga0373937_0000005 Ga0373937_0000005_14038_15015 288
210 3300037068 Ga0373925_0000007 Ga0373925_0000007_185178_186155 288
211 3300046454 Ga0495592_0000218 Ga0495592_0000218_25291_26268 288
212 3300046455 Ga0495603_0049237 Ga0495603_0049237_554_1522 288
213 3300046459 Ga0495629_0193736 Ga0495629_0193736_252_1244 288
214 3300046462 Ga0495651_0000435 Ga0495651_0000435_19411_20388 288
215 3300046463 Ga0495653_0000034 Ga0495653_0000034_70909_71886 288
216 3300046473 Ga0495582_0216533 Ga0495582_0216533_12_1004 288
217 3300046475 Ga0495639_0040488 Ga0495639_0040488_679_1647 288
218 3300046476 Ga0495662_0020402 Ga0495662_0020402_516_1493 288
219 3300046477 Ga0495664_0000003 Ga0495664_0000003_373406_374383 288
220 3300046491 Ga0495584_0102935 Ga0495584_0102935_73_1041 288
221 3300046511 Ga0495608_0000110 Ga0495608_0000110_38109_39086 288
222 3300046513 Ga0495616_0097268 Ga0495616_0097268_90_1058 288
223 3300046514 Ga0495618_0000018 Ga0495618_0000018_45152_46129 288
224 3300046516 Ga0495628_0000001 Ga0495628_0000001_862807_863784 288
225 3300046517 Ga0495630_0008828 Ga0495630_0008828_2186_3163 288
226 3300046520 Ga0495637_0066801 Ga0495637_0066801_167_1135 288
227 3300046529 Ga0495652_0000006 Ga0495652_0000006_130879_131856 288
228 3300046531 Ga0495665_0052274 Ga0495665_0052274_1139_2116 288
229 3300046533 Ga0495640_0000002 Ga0495640_0000002_317620_318597 288
230 3300046533 Ga0495640_0039893 Ga0495640_0039893_1356_2324 288
231 3300046533 Ga0495640_0046563 Ga0495640_0046563_1333_2325 288
232 3300046535 Ga0495586_0051521 Ga0495586_0051521_364_1341 288
233 3300046536 Ga0495587_0000001 Ga0495587_0000001_390076_391053 288
234 3300046537 Ga0495598_0000806 Ga0495598_0000806_4233_5201 288
235 3300046539 Ga0495621_0015817 Ga0495621_0015817_312_1280 288
236 3300046543 Ga0495645_0000009 Ga0495645_0000009_91631_92608 288
237 3300046559 Ga0495667_0000004 Ga0495667_0000004_289723_290700 288
238 3300046615 Ga0495656_0115976 Ga0495656_0115976_81_1082 288
239 3300046642 Ga0495634_0000014 Ga0495634_0000014_46111_47088 288
240 3300046663 Ga0495635_0000001 Ga0495635_0000001_375887_376864 288
241 3300046675 Ga0495657_0000107 Ga0495657_0000107_45058_46035 288
242 3300046678 Ga0495599_0000053 Ga0495599_0000053_70912_71889 288
243 3300046679 Ga0495623_0000018 Ga0495623_0000018_81107_82084 288
244 3300046680 Ga0495646_0000020 Ga0495646_0000020_70917_71894 288
245 3300046683 Ga0495658_0031328 Ga0495658_0031328_386_1354 288
246 3300046683 Ga0495658_0145170 Ga0495658_0145170_148_1125 288
247 3300046689 Ga0495613_0054934 Ga0495613_0054934_1048_2040 288
248 3300046689 Ga0495613_0065273 Ga0495613_0065273_585_1562 288
249 3300046690 Ga0495624_0005493 Ga0495624_0005493_1149_2126 288
250 3300046690 Ga0495624_0101519 Ga0495624_0101519_287_1255 288
251 3300046794 Ga0495589_0028191 Ga0495589_0028191_1492_2460 288
252 3300046809 Ga0495600_0000025 Ga0495600_0000025_36993_37970 288
253 3300047317 Ga0495604_0000008 Ga0495604_0000008_128981_129958 288
254 3300047319 Ga0495674_0000016 Ga0495674_0000016_211317_212294 288
255 3300047319 Ga0495674_0336300 Ga0495674_0336300_223_1191 288
256 3300047321 Ga0495676_0051704 Ga0495676_0051704_888_1856 288
257 3300047322 Ga0495680_0000146 Ga0495680_0000146_38225_39202 288
258 3300047444 Ga0495675_0000045 Ga0495675_0000045_56852_57829 288
259 3300047471 Ga0495684_0000002 Ga0495684_0000002_129039_130016 288
260 3300047673 Ga0495593_0000813 Ga0495593_0000813_4470_5447 288
261 3300047673 Ga0495593_0107370 Ga0495593_0107370_375_1367 288
262 3300048088 Ga0495602_0000022 Ga0495602_0000022_91644_92621 288
263 3300048903 Ga0496100_0037757 Ga0496100_0037757_1128_2120 288
264 3300048906 Ga0496103_0005229 Ga0496103_0005229_61_1029 288
265 3300048906 Ga0496103_0086964 Ga0496103_0086964_532_1524 288
266 3300048907 Ga0496104_0003330 Ga0496104_0003330_5394_6362 288
267 3300048907 Ga0496104_0009744 Ga0496104_0009744_7313_8284 288
268 3300048907 Ga0496104_0162279 Ga0496104_0162279_1014_2006 288
269 3300048907 Ga0496104_0362736 Ga0496104_0362736_221_1213 288
270 3300048908 Ga0496105_0001298 Ga0496105_0001298_7004_7972 288
271 3300048909 Ga0496106_0010785 Ga0496106_0010785_4990_5958 288
272 3300048909 Ga0496106_0260660 Ga0496106_0260660_303_1274 288
273 3300048911 Ga0496108_0007626 Ga0496108_0007626_1294_2262 288
274 3300048911 Ga0496108_0093836 Ga0496108_0093836_1251_2243 288
275 3300048912 Ga0496109_0001689 Ga0496109_0001689_7916_8884 288
276 3300048912 Ga0496109_0126263 Ga0496109_0126263_198_1190 288
277 3300048913 Ga0496110_0045958 Ga0496110_0045958_1685_2653 288
278 3300048913 Ga0496110_0129770 Ga0496110_0129770_282_1274 288
279 3300048914 Ga0496111_0017027 Ga0496111_0017027_1247_2215 288
280 3300048914 Ga0496111_0236881 Ga0496111_0236881_222_1223 288
281 3300048915 Ga0496112_0131518 Ga0496112_0131518_1294_2262 288
282 3300048916 Ga0496113_0002336 Ga0496113_0002336_500_1468 288
283 3300048916 Ga0496113_0159187 Ga0496113_0159187_104_1096 288
284 3300048917 Ga0496114_0034696 Ga0496114_0034696_2133_3125 288
285 3300048917 Ga0496114_0098800 Ga0496114_0098800_948_1940 288
286 3300048918 Ga0496115_0060117 Ga0496115_0060117_1174_2166 288
287 3300048918 Ga0496115_0205673 Ga0496115_0205673_253_1224 288
288 3300049586 Ga0501070_0267143 Ga0501070_0267143_73_1056 288
289 3300049587 Ga0501071_0026959 Ga0501071_0026959_262_1245 288
290 3300049588 Ga0501072_0004336 Ga0501072_0004336_5869_6852 288
291 3300049592 Ga0501076_0038231 Ga0501076_0038231_1281_2264 288
292 3300050507 nmdc:mga05p37_26660_c1 nmdc:mga05p37_26660_c1_819_1787 288
293 3300050507 nmdc:mga05p37_44555_c1 nmdc:mga05p37_44555_c1_2787_3794 288
294 3300050507 nmdc:mga05p37_88368_c1 nmdc:mga05p37_88368_c1_1908_2858 288
295 3300050509 nmdc:mga0qj67_391403_c1 nmdc:mga0qj67_391403_c1_107_1099 288
296 3300050510 nmdc:mga06r32_1267_c1 nmdc:mga06r32_1267_c1_21044_22042 288
297 3300050510 nmdc:mga06r32_356394_c1 nmdc:mga06r32_356394_c1_429_1421 288
298 3300050510 nmdc:mga06r32_44227_c1 nmdc:mga06r32_44227_c1_1794_2786 288
299 3300050511 nmdc:mga08y16_323309_c1 nmdc:mga08y16_323309_c1_161_1129 288
300 3300050512 nmdc:mga0n895_32188_c1 nmdc:mga0n895_32188_c1_2933_3901 288
301 3300053077 Ga0495601_0000001 Ga0495601_0000001_168539_169516 288
302 3300053078 Ga0495612_0000003 Ga0495612_0000003_173589_174566 288
303 3300053084 Ga0495595_0000105 Ga0495595_0000105_11964_12941 288
304 3300053085 Ga0495619_0000004 Ga0495619_0000004_168570_169547 288
305 3300053085 Ga0495619_0112023 Ga0495619_0112023_727_1719 288
306 3300060353 Ga0501082_0181658 Ga0501082_0181658_60_1043 288
307 3300061734 Ga0530510_0051661 Ga0530510_0051661_1678_2670 288
308 iso_pu_bacteria 2876808645 2876816349 288
309 iso_pu_bacteria 2879110137 2879112661 288
310 iso_pu_bacteria 8006964411 8006973286 288
311 3300003911 JGI25405J52794_10008078 JGI25405J52794_100080782 289
312 3300005937 Ga0081455_10008973 Ga0081455_1000897313 289
313 3300005937 Ga0081455_10009771 Ga0081455_100097714 289
314 3300006844 Ga0075428_100114045 Ga0075428_1001140453 289
315 3300009094 Ga0111539_10395307 Ga0111539_103953072 289
316 3300050489 nmdc:mga03683_9840_c1 nmdc:mga03683_9840_c1_2291_3262 289
317 3300050509 nmdc:mga0qj67_366017_c1 nmdc:mga0qj67_366017_c1_148_1119 289
318 3300005983 Ga0081540_1000065 Ga0081540_1000065122 290
319 3300006177 Ga0075362_10041960 Ga0075362_100419602 290
320 3300005367 Ga0070667_100059318 Ga0070667_1000593182 291
321 3300009098 Ga0105245_10000947 Ga0105245_1000094714 291
322 3300025927 Ga0207687_10019701 Ga0207687_100197012 291
323 3300025981 Ga0207640_10249808 Ga0207640_102498082 291
324 3300050512 nmdc:mga0n895_3519_c1 nmdc:mga0n895_3519_c1_9714_10850 296
325 3300053077 Ga0495601_0162667 Ga0495601_0162667_163_1296 298
326 3300003203 JGI25406J46586_10000144 JGI25406J46586_1000014421 302
327 3300005985 Ga0081539_10000616 Ga0081539_1000061650 302

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

101

374

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9339 34 301
8hk9-assembly2.cif.gz_A apo-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis 0.918 36 298
7ndr-assembly1.cif.gz_E crystal structure of tphc in an open conformation 0.9048 38 298
2qpq-assembly2.cif.gz_B structure of bug27 from bordetella pertussis 0.8723 33 301
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.854 33 299
ID Description Score Start End Superfamily
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9354 33 301 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9317 33 301 3.40.190.150
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9278 132 210 3.40.190.10
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.9263 33 301 3.40.190.150
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.925 33 301 3.40.190.150
ID Description Score Start End GO Terms
AF-A0A0Q4Y6X1-F1-model_v4 ABC transporter substrate-binding protein 0.9592 60 301
AF-A0A3P4B635-F1-model_v4 Tripartite tricarboxylate transporter family receptor 0.95 32 302
AF-A0A537U4L1-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9486 62 293
AF-A0A4V2HUY2-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9477 96 301
AF-A0A1F4BK11-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9455 86 269

Feature Viewer

pLDDT pTM Quality
83.08 0.77 High
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Predicted Structure (AlphaFold2)

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