F408913

General Info

Members Datasets Scaffolds Average Seq Length
327 186 307 143

Family's Representative Sequence

Representative Sequence 3300046452|Ga0495617_000006|Ga0495617_000006_276373_276882
Length 169
Sequence MACLSPDCYGEQLRIIDPVINVEGEHIMLGSKLDDYMRFNETALSLRSTRQSVLASNIANADTPNYKARDIDFSATMQAALDKANPNAQQSLATTAVKHYPNPLQDAGTLADGTPLLYRGVIQGAVDGNTVDMDVERNQFADNAIRYEAGITAINGQIKSMLAAIQSGS

Samples

Sample ID Description Type Environment
1 2548876994 Herbaspirillum lusitanum P6-12 Isolate Nodule
2 2643221554 Duganella sp. Root1480D1 Isolate Unclassified
3 2643221638 Duganella sp. Root336D2 Isolate Unclassified
4 2738541297 Duganella sp. GV083 Isolate Unclassified
5 2738541357 Duganella sp. GV053 Isolate Unclassified
6 2738543003 Duganella sp. GV066 Isolate Unclassified
7 2738543026 Duganella sp. GV089 Isolate Unclassified
8 2738543029 Duganella sp. GV039 Isolate Unclassified
9 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
10 2821131069 Duganella sp. 1224 Isolate Unclassified
11 2842711865 Duganella sp. R-73148 Isolate Unclassified
12 2857553236 Duganella sp. R-74557 Isolate Unclassified
13 2857558681 Duganella sp. R-74565 Isolate Unclassified
14 2857564685 Duganella sp. R-74599 Isolate Unclassified
15 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
16 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
17 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
18 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
19 2904424332 Duganella sp. 1411 Isolate Rhizosphere
20 2919476304 Duganella sp. 3397 Isolate Unclassified
21 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
22 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
23 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
24 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
25 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
26 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
27 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
28 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
29 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
30 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
31 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
32 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
33 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
34 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
35 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
36 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
37 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
38 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
41 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
42 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
43 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
47 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
48 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
49 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
50 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
56 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
57 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
58 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
59 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
60 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
61 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
62 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
63 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
64 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
65 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
66 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
69 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
70 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
74 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
75 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
76 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
77 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
94 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
98 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
101 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
104 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
105 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
106 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
107 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
108 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
109 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
110 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
111 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
112 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
113 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
117 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
118 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
119 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
120 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
124 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
125 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
126 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
127 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
128 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
129 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
130 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
131 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
132 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
133 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
134 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
135 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
136 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
137 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
140 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
141 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
142 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
145 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
146 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
147 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
148 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
149 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
150 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
151 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
152 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
153 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
161 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
162 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
163 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
169 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
170 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
173 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
174 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
175 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
176 3300049678 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought Metagenome Rhizosphere
177 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
178 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
179 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
180 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
181 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
182 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
183 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
184 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
185 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
186 3300053738 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.27
Metatranscriptomes 0.61
Isolates 6.12

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 23.24
Nodule 1.53
Rhizoplane 3.67
Rhizosphere 55.96
Stem 0
Stem Tuber 0
Unclassified 15.6

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000228 3300002704 Bacteria 22132
2 JGI25156J39149_1000152 3300002705 Bacteria 51354
3 JGI25154J39366_1000166 3300002738 Bacteria 51354
4 JGI25154J39366_1000677 3300002738 Bacteria 15771
5 JGI25158J39367_1001073 3300002739 Bacteria 4965
6 JGI25157J39369_1000104 3300002741 Bacteria 72176
7 JGI25152J39213_1000108 3300002773 Bacteria 58108
8 JGI25150J39212_1005399 3300002774 Bacteria 2730
9 JGI25150J39212_1009782 3300002774 Bacteria 1810
10 JGI25150J39212_1035014 3300002774 Bacteria 673
11 JGI25159J45721_1001293 3300002987 Bacteria 10567
12 JGI25153J46596_10007627 3300003215 Bacteria 5286
13 Ga0055532_1000015 3300003758 Bacteria 340197
14 Ga0055529_1000185 3300003763 Bacteria 85584
15 Ga0055526_1000166 3300003771 Bacteria 57918
16 Ga0055526_1000302 3300003771 Bacteria 41148
17 Ga0055526_1001662 3300003771 Bacteria 15600
18 Ga0055526_1009670 3300003771 Bacteria 4599
19 Ga0055537_1000109 3300003773 Bacteria 62298
20 Ga0055524_1000007 3300003775 Bacteria 298766
21 Ga0055524_1001785 3300003775 Bacteria 11815
22 Ga0055524_1009073 3300003775 Bacteria 4079
23 Ga0055534_1000280 3300003784 Bacteria 34767
24 Ga0055534_1004904 3300003784 Bacteria 3742
25 Ga0055528_1000025 3300003790 Bacteria 130730
26 Ga0055528_1021235 3300003790 Bacteria 2069
27 Ga0055530_10015131 3300003791 Bacteria 2538
28 Ga0055531_10002855 3300003794 Bacteria 11273
29 Ga0065165_1000094 3300005262 Bacteria 146099
30 Ga0065165_1083543 3300005262 Bacteria 825
31 Ga0070670_100462022 3300005331 Bacteria 1126
32 Ga0070680_100829015 3300005336 Bacteria 797
33 Ga0070680_101418343 3300005336 Bacteria 601
34 Ga0070682_100658677 3300005337 Bacteria 834
35 Ga0068855_100128624 3300005563 Unclassified 2894
36 Ga0068855_100393133 3300005563 Bacteria 1520
37 Ga0068854_101024277 3300005578 Bacteria 732
38 Ga0068856_100220045 3300005614 Bacteria 1914
39 Ga0068852_100308937 3300005616 Bacteria 1533
40 Ga0075362_10031300 3300006177 Bacteria 2302
41 Ga0075366_10450325 3300006195 Bacteria 794
42 Ga0079104_1007428 3300006946 Bacteria 3977
43 Ga0079104_1018273 3300006946 Bacteria 1991
44 Ga0105244_10009040 3300009036 Bacteria 6164
45 Ga0105240_10001159 3300009093 Bacteria 46178
46 Ga0105248_11170129 3300009177 Bacteria 869
47 Ga0105238_10019289 3300009551 Bacteria 6947
48 Ga0105239_10429568 3300010375 Bacteria 1497
49 Ga0182008_10018322 3300014497 Bacteria 3625
50 Ga0182006_1000163 3300015261 Bacteria 70369
51 Ga0182006_1248664 3300015261 Bacteria 584
52 Ga0182007_10029416 3300015262 Bacteria 1881
53 Ga0182005_1000020 3300015265 Bacteria 278671
54 Ga0163161_10452746 3300017792 Bacteria 1038
55 Ga0213872_10000874 3300021361 Bacteria 21816
56 Ga0213872_10009471 3300021361 Bacteria 4670
57 Ga0209435_100035 3300025206 Bacteria 142907
58 Ga0209436_100803 3300025208 Bacteria 12861
59 Ga0209436_115611 3300025208 Bacteria 1168
60 Ga0209436_118899 3300025208 Bacteria 968
61 Ga0209147_100004 3300025229 Bacteria 1371850
62 Ga0209437_101586 3300025233 Bacteria 5257
63 Ga0209437_126167 3300025233 Bacteria 639
64 Ga0207425_1000001 3300025245 Bacteria 2525432
65 Ga0207425_1000153 3300025245 Bacteria 58689
66 Ga0207425_1001104 3300025245 Bacteria 12260
67 Ga0209646_1000028 3300025246 Bacteria 387986
68 Ga0209646_1000146 3300025246 Bacteria 104682
69 Ga0209026_1000165 3300025250 Bacteria 101338
70 Ga0209759_1000095 3300025256 Bacteria 158102
71 Ga0209129_1000001 3300025258 Bacteria 1452436
72 Ga0209129_1004994 3300025258 Bacteria 4896
73 Ga0209565_1000009 3300025263 Bacteria 751701
74 Ga0209565_1003434 3300025263 Bacteria 5126
75 Ga0209565_1005827 3300025263 Bacteria 3536
76 Ga0209565_1007017 3300025263 Bacteria 3087
77 Ga0209455_1000049 3300025272 Bacteria 374414
78 Ga0209455_1002130 3300025272 Bacteria 7855
79 Ga0209673_1000036 3300025273 Bacteria 323162
80 Ga0209673_1010891 3300025273 Bacteria 3795
81 Ga0209130_1000762 3300025284 Bacteria 27906
82 Ga0209130_1000936 3300025284 Bacteria 23302
83 Ga0209130_1005633 3300025284 Bacteria 4290
84 Ga0209675_1000013 3300025291 Bacteria 448220
85 Ga0209675_1025353 3300025291 Bacteria 1497
86 Ga0209564_1000045 3300025295 Bacteria 376549
87 Ga0209564_1000175 3300025295 Bacteria 153109
88 Ga0209564_1000514 3300025295 Bacteria 63392
89 Ga0209564_1003401 3300025295 Bacteria 10952
90 Ga0209564_1008346 3300025295 Bacteria 5126
91 Ga0209758_1000055 3300025297 Bacteria 336183
92 Ga0209758_1000149 3300025297 Bacteria 163504
93 Ga0209050_1000334 3300025298 Bacteria 93637
94 Ga0209050_1001265 3300025298 Bacteria 29124
95 Ga0209050_1004689 3300025298 Bacteria 9076
96 Ga0209256_1000358 3300025299 Bacteria 74650
97 Ga0209256_1002150 3300025299 Bacteria 17020
98 Ga0209256_1007843 3300025299 Bacteria 5126
99 Ga0209256_1018656 3300025299 Bacteria 2241
100 Ga0207426_1020739 3300025302 Bacteria 2280
101 Ga0209051_1064875 3300025303 Bacteria 1129
102 Ga0209257_1000010 3300025304 Bacteria 1158682
103 Ga0209257_1003274 3300025304 Bacteria 14145
104 Ga0207655_1004259 3300025728 Bacteria 10239
105 Ga0207713_1046683 3300025735 Bacteria 1759
106 Ga0207695_10004237 3300025913 Bacteria 19707
107 Ga0207660_10876442 3300025917 Bacteria 733
108 Ga0207694_10180526 3300025924 Bacteria 1711
109 Ga0207667_10016340 3300025949 Bacteria 8389
110 Ga0207667_10602308 3300025949 Bacteria 1108
111 Ga0207640_10871743 3300025981 Bacteria 785
112 Ga0207702_10408442 3300026078 Bacteria 1311
113 Ga0207698_11176700 3300026142 Bacteria 780
114 Ga0209281_1026884 3300027111 Bacteria 1059
115 Ga0307515_10291705 3300028794 Bacteria 1326
116 Ga0316181_1070941 3300030744 Bacteria 3582
117 Ga0265328_10000004 3300031239 Bacteria 242356
118 Ga0307513_10651357 3300031456 Bacteria 760
119 Ga0307408_100001137 3300031548 Bacteria 20218
120 Ga0307408_100002971 3300031548 Bacteria 11742
121 Ga0307408_100051045 3300031548 Bacteria 2977
122 Ga0307408_100148941 3300031548 Bacteria 1845
123 Ga0307408_100225031 3300031548 Bacteria 1533
124 Ga0265314_10055172 3300031711 Bacteria 2745
125 Ga0307518_10002114 3300031838 Bacteria 14581
126 Ga0307416_100000607 3300032002 Bacteria 18461
127 Ga0307414_10909975 3300032004 Bacteria 807
128 Ga0395905_0030976 3300037471 Bacteria 5037
129 Ga0436361_0315037 3300039447 Bacteria 3716
130 Ga0436361_0321638 3300039447 Bacteria 7541
131 Ga0436361_0660666 3300039447 Bacteria 586
132 Ga0451847_0089712 3300041503 Bacteria 687
133 Ga0451853_4011651 3300041512 Bacteria 1439
134 Ga0439458_0077041 3300042157 Bacteria 847
135 Ga0466982_0184854 3300044672 Bacteria 1258
136 Ga0466965_0023758 3300044683 Bacteria 2961
137 Ga0466964_0474903 3300044706 Bacteria 667
138 Ga0466968_0315180 3300044735 Bacteria 754
139 Ga0495617_000006 3300046452 Bacteria 398279
140 Ga0495617_006753 3300046452 Bacteria 4013
141 Ga0495627_000005 3300046453 Bacteria 630805
142 Ga0495627_018741 3300046453 Bacteria 2329
143 Ga0495590_0000003 3300046457 Bacteria 478593
144 Ga0495638_0000066 3300046460 Bacteria 168673
145 Ga0495638_0011525 3300046460 Bacteria 6089
146 Ga0495638_0039913 3300046460 Bacteria 2977
147 Ga0495638_0074138 3300046460 Bacteria 2076
148 Ga0495638_0086538 3300046460 Bacteria 1894
149 Ga0495653_0000011 3300046463 Bacteria 272314
150 Ga0495650_0000352 3300046471 Bacteria 81351
151 Ga0495650_0000752 3300046471 Bacteria 40464
152 Ga0495650_0000801 3300046471 Bacteria 38279
153 Ga0495650_0002737 3300046471 Bacteria 13629
154 Ga0495650_0012015 3300046471 Bacteria 4687
155 Ga0495650_0051368 3300046471 Bacteria 1699
156 Ga0495605_0000003 3300046474 Bacteria 491502
157 Ga0495639_0036134 3300046475 Bacteria 2211
158 Ga0495585_0166650 3300046492 Bacteria 1140
159 Ga0495594_0472374 3300046499 Bacteria 713
160 Ga0495607_0005286 3300046501 Bacteria 9286
161 Ga0495607_0019018 3300046501 Bacteria 4367
162 Ga0495583_0000079 3300046506 Bacteria 169681
163 Ga0495606_0000284 3300046507 Bacteria 88119
164 Ga0495606_0001123 3300046507 Bacteria 38220
165 Ga0495606_0001209 3300046507 Bacteria 36268
166 Ga0495606_0001720 3300046507 Bacteria 28152
167 Ga0495606_0002639 3300046507 Bacteria 20460
168 Ga0495606_0003360 3300046507 Bacteria 17058
169 Ga0495606_0012862 3300046507 Bacteria 6667
170 Ga0495606_0148441 3300046507 Bacteria 1378
171 Ga0495610_0000004 3300046512 Bacteria 1006135
172 Ga0495610_0003019 3300046512 Bacteria 13489
173 Ga0495610_0009867 3300046512 Bacteria 5979
174 Ga0495610_0015115 3300046512 Bacteria 4501
175 Ga0495610_0032982 3300046512 Bacteria 2682
176 Ga0495610_0052468 3300046512 Bacteria 1979
177 Ga0495631_0058845 3300046518 Bacteria 1670
178 Ga0495637_0002213 3300046520 Bacteria 10861
179 Ga0495643_0000269 3300046522 Bacteria 75478
180 Ga0495643_0000613 3300046522 Bacteria 42548
181 Ga0495643_0231425 3300046522 Bacteria 871
182 Ga0495648_0000474 3300046524 Bacteria 43183
183 Ga0495648_0019991 3300046524 Bacteria 4685
184 Ga0495648_0030693 3300046524 Bacteria 3549
185 Ga0495648_0037087 3300046524 Bacteria 3137
186 Ga0495648_0093600 3300046524 Bacteria 1675
187 Ga0495642_0001206 3300046528 Bacteria 11899
188 Ga0495642_0056245 3300046528 Bacteria 1624
189 Ga0495642_0121290 3300046528 Bacteria 1122
190 Ga0495642_0142605 3300046528 Bacteria 1034
191 Ga0495654_0009905 3300046530 Bacteria 5209
192 Ga0495654_0089331 3300046530 Bacteria 1432
193 Ga0495654_0228774 3300046530 Bacteria 783
194 Ga0495598_0028158 3300046537 Bacteria 1557
195 Ga0495609_0050892 3300046538 Bacteria 1845
196 Ga0495609_0077165 3300046538 Bacteria 1459
197 Ga0495609_0141304 3300046538 Bacteria 1027
198 Ga0495621_0009870 3300046539 Bacteria 2913
199 Ga0495621_0200149 3300046539 Bacteria 803
200 Ga0495597_0000170 3300046542 Bacteria 57689
201 Ga0495597_0000346 3300046542 Bacteria 41442
202 Ga0495597_0065647 3300046542 Bacteria 1574
203 Ga0495622_0000884 3300046557 Bacteria 16334
204 Ga0495622_0000928 3300046557 Bacteria 15844
205 Ga0495633_0000230 3300046558 Bacteria 68204
206 Ga0495633_0013937 3300046558 Bacteria 4215
207 Ga0495633_0029070 3300046558 Bacteria 2689
208 Ga0495633_0040503 3300046558 Bacteria 2219
209 Ga0495633_0051547 3300046558 Bacteria 1938
210 Ga0495633_0120307 3300046558 Bacteria 1216
211 Ga0495656_0166320 3300046615 Bacteria 1075
212 Ga0495656_0228554 3300046615 Bacteria 933
213 Ga0495668_0000168 3300046616 Bacteria 97230
214 Ga0495668_0000729 3300046616 Bacteria 39374
215 Ga0495668_0001111 3300046616 Bacteria 27748
216 Ga0495668_0002565 3300046616 Bacteria 14763
217 Ga0495668_0151010 3300046616 Bacteria 1272
218 Ga0495668_0601755 3300046616 Bacteria 607
219 Ga0495625_0000562 3300046660 Bacteria 54473
220 Ga0495625_0001427 3300046660 Bacteria 29158
221 Ga0495625_0002051 3300046660 Bacteria 22609
222 Ga0495625_0007203 3300046660 Bacteria 9740
223 Ga0495625_0040585 3300046660 Bacteria 3392
224 Ga0495659_0369320 3300046664 Bacteria 615
225 Ga0495588_0021282 3300046674 Bacteria 3194
226 Ga0495588_0044801 3300046674 Bacteria 2266
227 Ga0495588_0476543 3300046674 Bacteria 654
228 Ga0495623_0444385 3300046679 Bacteria 691
229 Ga0495671_0000001 3300046692 Bacteria 1169494
230 Ga0495671_0073849 3300046692 Bacteria 1674
231 Ga0495671_0096722 3300046692 Bacteria 1444
232 Ga0495671_0362803 3300046692 Bacteria 694
233 Ga0495649_0027173 3300046694 Bacteria 3176
234 Ga0495649_0076656 3300046694 Bacteria 1790
235 Ga0495649_0145562 3300046694 Bacteria 1246
236 Ga0495649_0197493 3300046694 Bacteria 1046
237 Ga0495649_0205397 3300046694 Bacteria 1022
238 Ga0495649_0551551 3300046694 Bacteria 570
239 Ga0495660_0000416 3300046810 Bacteria 36277
240 Ga0495660_0001974 3300046810 Bacteria 13350
241 Ga0495660_0005137 3300046810 Bacteria 7868
242 Ga0495604_0330319 3300047317 Bacteria 1017
243 Ga0495672_0000379 3300047320 Bacteria 55067
244 Ga0495676_0467743 3300047321 Bacteria 830
245 Ga0495683_0016199 3300047323 Bacteria 3871
246 Ga0495683_0064863 3300047323 Bacteria 1803
247 Ga0495683_0133494 3300047323 Bacteria 1169
248 Ga0495679_012804 3300047446 Bacteria 3174
249 Ga0495679_130805 3300047446 Bacteria 681
250 Ga0495673_0000006 3300047469 Bacteria 908691
251 Ga0495673_0000014 3300047469 Bacteria 599202
252 Ga0495673_0000090 3300047469 Bacteria 188187
253 Ga0495681_0014127 3300047470 Bacteria 4597
254 Ga0495686_0002157 3300047472 Bacteria 19203
255 Ga0495686_0118831 3300047472 Bacteria 1578
256 Ga0495686_0257756 3300047472 Bacteria 977
257 Ga0495615_0095666 3300048090 Bacteria 833
258 Ga0496100_0288093 3300048903 Bacteria 1226
259 Ga0496101_0503349 3300048904 Bacteria 957
260 Ga0496102_0018558 3300048905 Bacteria 6115
261 Ga0496104_0041100 3300048907 Bacteria 4335
262 Ga0496105_0281276 3300048908 Bacteria 1341
263 Ga0496106_0099287 3300048909 Bacteria 2257
264 Ga0496107_0051784 3300048910 Bacteria 2962
265 Ga0496109_0230293 3300048912 Bacteria 1743
266 Ga0496110_0836500 3300048913 Bacteria 825
267 Ga0496115_0030449 3300048918 Bacteria 4245
268 Ga0496115_0356305 3300048918 Bacteria 1193
269 Ga0496115_0483448 3300048918 Bacteria 997
270 Ga0496116_0002821 3300048919 Bacteria 17836
271 Ga0496116_0076251 3300048919 Bacteria 2101
272 Ga0496116_0329465 3300048919 Bacteria 710
273 Ga0496120_0230019 3300048923 Bacteria 881
274 Ga0496121_0047265 3300048924 Bacteria 3674
275 Ga0496121_0152775 3300048924 Bacteria 1697
276 Ga0496121_0354902 3300048924 Bacteria 975
277 Ga0496121_0544682 3300048924 Bacteria 727
278 Ga0496122_0002624 3300048925 Bacteria 25161
279 Ga0496122_0084284 3300048925 Bacteria 2199
280 Ga0496123_0000441 3300048926 Bacteria 74721
281 Ga0496123_0019246 3300048926 Bacteria 5387
282 Ga0496124_0107264 3300048927 Bacteria 2254
283 Ga0496124_0251280 3300048927 Bacteria 1308
284 Ga0496124_0628383 3300048927 Bacteria 693
285 Ga0496124_0658414 3300048927 Bacteria 671
286 Ga0496125_0005009 3300048928 Bacteria 14959
287 Ga0496126_0074117 3300048929 Bacteria 3023
288 Ga0501310_000551 3300049130 Bacteria 3322
289 Ga0501310_004643 3300049130 Bacteria 1386
290 Ga0495678_000016 3300049459 Bacteria 303426
291 Ga0495678_000096 3300049459 Bacteria 109474
292 Ga0495678_043363 3300049459 Bacteria 1786
293 Ga0501227_005511 3300049665 Bacteria 2708
294 Ga0501230_010075 3300049667 Bacteria 1467
295 Ga0501248_027862 3300049678 Bacteria 628
296 Ga0501249_009349 3300049679 Bacteria 2039
297 Ga0501221_017305 3300049704 Bacteria 1374
298 Ga0501269_000086 3300049766 Bacteria 28992
299 Ga0501279_001240 3300049775 Bacteria 3353
300 Ga0501279_011167 3300049775 Bacteria 1212
301 nmdc:mga0k408_421146_c1 3300050493 Bacteria 794
302 Ga0500594_0026650 3300053118 Bacteria 1490
303 Ga0500618_000431 3300053125 Bacteria 27850
304 Ga0500586_003312 3300053145 Bacteria 3795
305 Ga0500586_018327 3300053145 Bacteria 2158
306 Ga0500634_0238162 3300053161 Bacteria 766
307 Ga0500613_009801 3300053738 Bacteria 1065

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046520 Ga0495637_0002213 Ga0495637_0002213_7233_7682 123
2 3300046452 Ga0495617_006753 Ga0495617_006753_1331_1780 124
3 3300047323 Ga0495683_0064863 Ga0495683_0064863_1142_1591 124
4 3300006195 Ga0075366_10450325 Ga0075366_104503252 129
5 3300053738 Ga0500613_009801 Ga0500613_009801_55_459 129
6 3300050493 nmdc:mga0k408_421146_c1 nmdc:mga0k408_421146_c1_15_482 130
7 iso_pu_bacteria 2643221554 2643788262 131
8 iso_pu_bacteria 2643221638 2644213808 131
9 3300005337 Ga0070682_100658677 Ga0070682_1006586771 132
10 3300031239 Ga0265328_10000004 Ga0265328_10000004223 132
11 3300046471 Ga0495650_0051368 Ga0495650_0051368_913_1323 132
12 3300048918 Ga0496115_0356305 Ga0496115_0356305_88_507 133
13 iso_pu_bacteria 2842711865 2842717283 133
14 iso_pu_bacteria 2857553236 2857553774 133
15 iso_pu_bacteria 2857558681 2857564216 133
16 iso_pu_bacteria 2904424332 2904430509 133
17 iso_pu_bacteria 2919476304 2919480398 133
18 3300003775 Ga0055524_1000007 Ga0055524_1000007197 134
19 3300005331 Ga0070670_100462022 Ga0070670_1004620222 134
20 3300006946 Ga0079104_1018273 Ga0079104_10182732 134
21 3300017792 Ga0163161_10452746 Ga0163161_104527462 134
22 3300031838 Ga0307518_10002114 Ga0307518_1000211413 134
23 3300041503 Ga0451847_0089712 Ga0451847_0089712_210_635 134
24 3300044672 Ga0466982_0184854 Ga0466982_0184854_612_1028 134
25 3300046537 Ga0495598_0028158 Ga0495598_0028158_855_1277 134
26 3300046539 Ga0495621_0009870 Ga0495621_0009870_865_1287 134
27 3300046539 Ga0495621_0200149 Ga0495621_0200149_57_479 134
28 3300046694 Ga0495649_0197493 Ga0495649_0197493_217_633 134
29 3300046694 Ga0495649_0551551 Ga0495649_0551551_131_547 134
30 3300048090 Ga0495615_0095666 Ga0495615_0095666_348_770 134
31 3300048905 Ga0496102_0018558 Ga0496102_0018558_3209_3631 134
32 3300048907 Ga0496104_0041100 Ga0496104_0041100_2721_3143 134
33 3300048908 Ga0496105_0281276 Ga0496105_0281276_610_1032 134
34 3300048909 Ga0496106_0099287 Ga0496106_0099287_492_914 134
35 3300048910 Ga0496107_0051784 Ga0496107_0051784_1711_2133 134
36 3300048912 Ga0496109_0230293 Ga0496109_0230293_562_984 134
37 3300048913 Ga0496110_0836500 Ga0496110_0836500_218_640 134
38 iso_pu_bacteria 2738541297 2738825055 134
39 iso_pu_bacteria 2738541357 2739148852 134
40 iso_pu_bacteria 2738543003 2739190771 134
41 iso_pu_bacteria 2738543026 2739317248 134
42 iso_pu_bacteria 2738543029 2739335489 134
43 iso_pu_bacteria 2821131069 2821133662 134
44 iso_pu_bacteria 2857564685 2857565449 134
45 3300002739 JGI25158J39367_1001073 JGI25158J39367_10010733 135
46 3300002773 JGI25152J39213_1000108 JGI25152J39213_100010847 135
47 3300002774 JGI25150J39212_1009782 JGI25150J39212_10097822 135
48 3300002774 JGI25150J39212_1035014 JGI25150J39212_10350141 135
49 3300002987 JGI25159J45721_1001293 JGI25159J45721_10012936 135
50 3300003215 JGI25153J46596_10007627 JGI25153J46596_100076275 135
51 3300003771 Ga0055526_1001662 Ga0055526_100166212 135
52 3300003771 Ga0055526_1009670 Ga0055526_10096701 135
53 3300003773 Ga0055537_1000109 Ga0055537_100010930 135
54 3300003775 Ga0055524_1001785 Ga0055524_100178511 135
55 3300003775 Ga0055524_1009073 Ga0055524_10090731 135
56 3300003784 Ga0055534_1000280 Ga0055534_100028021 135
57 3300003784 Ga0055534_1004904 Ga0055534_10049046 135
58 3300003790 Ga0055528_1000025 Ga0055528_100002550 135
59 3300003790 Ga0055528_1021235 Ga0055528_10212353 135
60 3300003791 Ga0055530_10015131 Ga0055530_100151313 135
61 3300003794 Ga0055531_10002855 Ga0055531_100028557 135
62 3300005262 Ga0065165_1000094 Ga0065165_100009420 135
63 3300005262 Ga0065165_1083543 Ga0065165_10835431 135
64 3300009177 Ga0105248_11170129 Ga0105248_111701292 135
65 3300025208 Ga0209436_100803 Ga0209436_10080312 135
66 3300025208 Ga0209436_115611 Ga0209436_1156113 135
67 3300025208 Ga0209436_118899 Ga0209436_1188991 135
68 3300025245 Ga0207425_1000001 Ga0207425_10000012052 135
69 3300025245 Ga0207425_1000153 Ga0207425_100015351 135
70 3300025258 Ga0209129_1000001 Ga0209129_10000011229 135
71 3300025258 Ga0209129_1004994 Ga0209129_10049943 135
72 3300025263 Ga0209565_1000009 Ga0209565_1000009489 135
73 3300025263 Ga0209565_1003434 Ga0209565_10034345 135
74 3300025263 Ga0209565_1005827 Ga0209565_10058275 135
75 3300025263 Ga0209565_1007017 Ga0209565_10070172 135
76 3300025273 Ga0209673_1000036 Ga0209673_1000036193 135
77 3300025273 Ga0209673_1010891 Ga0209673_10108914 135
78 3300025284 Ga0209130_1000762 Ga0209130_100076216 135
79 3300025284 Ga0209130_1000936 Ga0209130_100093612 135
80 3300025284 Ga0209130_1005633 Ga0209130_10056332 135
81 3300025291 Ga0209675_1000013 Ga0209675_1000013193 135
82 3300025291 Ga0209675_1025353 Ga0209675_10253532 135
83 3300025295 Ga0209564_1000175 Ga0209564_1000175134 135
84 3300025295 Ga0209564_1003401 Ga0209564_10034016 135
85 3300025295 Ga0209564_1008346 Ga0209564_10083465 135
86 3300025297 Ga0209758_1000055 Ga0209758_1000055300 135
87 3300025298 Ga0209050_1000334 Ga0209050_10003344 135
88 3300025298 Ga0209050_1001265 Ga0209050_100126523 135
89 3300025298 Ga0209050_1004689 Ga0209050_10046891 135
90 3300025299 Ga0209256_1000358 Ga0209256_100035852 135
91 3300025299 Ga0209256_1002150 Ga0209256_10021509 135
92 3300025299 Ga0209256_1007843 Ga0209256_10078435 135
93 3300025299 Ga0209256_1018656 Ga0209256_10186562 135
94 3300025302 Ga0207426_1020739 Ga0207426_10207392 135
95 3300025303 Ga0209051_1064875 Ga0209051_10648751 135
96 3300025304 Ga0209257_1000010 Ga0209257_10000101100 135
97 3300025304 Ga0209257_1003274 Ga0209257_10032741 135
98 3300031548 Ga0307408_100001137 Ga0307408_10000113715 135
99 3300031548 Ga0307408_100002971 Ga0307408_10000297113 135
100 3300031548 Ga0307408_100051045 Ga0307408_1000510454 135
101 3300031548 Ga0307408_100148941 Ga0307408_1001489413 135
102 3300031548 Ga0307408_100225031 Ga0307408_1002250312 135
103 3300032002 Ga0307416_100000607 Ga0307416_10000060721 135
104 3300042157 Ga0439458_0077041 Ga0439458_0077041_127_546 135
105 3300046460 Ga0495638_0074138 Ga0495638_0074138_415_834 135
106 3300046692 Ga0495671_0073849 Ga0495671_0073849_850_1269 135
107 3300047472 Ga0495686_0002157 Ga0495686_0002157_6843_7262 135
108 3300048903 Ga0496100_0288093 Ga0496100_0288093_527_946 135
109 3300049130 Ga0501310_000551 Ga0501310_000551_104_523 135
110 3300049665 Ga0501227_005511 Ga0501227_005511_1966_2385 135
111 3300049678 Ga0501248_027862 Ga0501248_027862_68_487 135
112 3300049775 Ga0501279_001240 Ga0501279_001240_1661_2080 135
113 3300049775 Ga0501279_011167 Ga0501279_011167_418_837 135
114 3300003763 Ga0055529_1000185 Ga0055529_100018511 136
115 3300005336 Ga0070680_100829015 Ga0070680_1008290152 136
116 3300005563 Ga0068855_100128624 Ga0068855_1001286243 136
117 3300025233 Ga0209437_126167 Ga0209437_1261671 136
118 3300025272 Ga0209455_1000049 Ga0209455_1000049119 136
119 3300025917 Ga0207660_10876442 Ga0207660_108764421 136
120 3300025949 Ga0207667_10602308 Ga0207667_106023083 136
121 3300032004 Ga0307414_10909975 Ga0307414_109099752 136
122 3300037471 Ga0395905_0030976 Ga0395905_0030976_308_721 136
123 3300044683 Ga0466965_0023758 Ga0466965_0023758_476_898 136
124 3300044735 Ga0466968_0315180 Ga0466968_0315180_258_680 136
125 3300046492 Ga0495585_0166650 Ga0495585_0166650_340_762 136
126 3300046499 Ga0495594_0472374 Ga0495594_0472374_120_584 136
127 3300046507 Ga0495606_0003360 Ga0495606_0003360_13366_13788 136
128 3300046507 Ga0495606_0148441 Ga0495606_0148441_891_1313 136
129 3300046518 Ga0495631_0058845 Ga0495631_0058845_236_658 136
130 3300046524 Ga0495648_0019991 Ga0495648_0019991_2328_2750 136
131 3300046528 Ga0495642_0142605 Ga0495642_0142605_510_932 136
132 3300046542 Ga0495597_0065647 Ga0495597_0065647_149_571 136
133 3300046558 Ga0495633_0029070 Ga0495633_0029070_1689_2111 136
134 3300046615 Ga0495656_0228554 Ga0495656_0228554_381_803 136
135 3300046616 Ga0495668_0151010 Ga0495668_0151010_628_1050 136
136 3300046616 Ga0495668_0601755 Ga0495668_0601755_25_489 136
137 3300046674 Ga0495588_0021282 Ga0495588_0021282_780_1220 136
138 3300046674 Ga0495588_0044801 Ga0495588_0044801_1030_1494 136
139 3300046674 Ga0495588_0476543 Ga0495588_0476543_145_567 136
140 3300046679 Ga0495623_0444385 Ga0495623_0444385_66_488 136
141 3300046692 Ga0495671_0362803 Ga0495671_0362803_177_599 136
142 3300047317 Ga0495604_0330319 Ga0495604_0330319_414_836 136
143 3300047321 Ga0495676_0467743 Ga0495676_0467743_227_649 136
144 3300047323 Ga0495683_0133494 Ga0495683_0133494_302_724 136
145 3300048918 Ga0496115_0030449 Ga0496115_0030449_3334_3756 136
146 3300048927 Ga0496124_0658414 Ga0496124_0658414_204_626 136
147 3300049130 Ga0501310_004643 Ga0501310_004643_862_1284 136
148 3300049667 Ga0501230_010075 Ga0501230_010075_923_1375 136
149 3300049704 Ga0501221_017305 Ga0501221_017305_133_555 136
150 iso_pu_bacteria 2548876994 2550694397 136
151 iso_pu_bacteria 2818991445 2819592418 136
152 iso_pu_bacteria 2884811622 2884814762 136
153 iso_pu_bacteria 2884836552 2884840103 136
154 iso_pu_bacteria 2884852848 2884857130 136
155 iso_pu_bacteria 2896154374 2896157716 136
156 3300002738 JGI25154J39366_1000677 JGI25154J39366_10006776 137
157 3300002774 JGI25150J39212_1005399 JGI25150J39212_10053994 137
158 3300003771 Ga0055526_1000166 Ga0055526_100016636 137
159 3300003771 Ga0055526_1000302 Ga0055526_100030216 137
160 3300005336 Ga0070680_101418343 Ga0070680_1014183431 137
161 3300006177 Ga0075362_10031300 Ga0075362_100313003 137
162 3300006946 Ga0079104_1007428 Ga0079104_10074285 137
163 3300009036 Ga0105244_10009040 Ga0105244_100090402 137
164 3300015261 Ga0182006_1000163 Ga0182006_100016321 137
165 3300015261 Ga0182006_1248664 Ga0182006_12486642 137
166 3300015262 Ga0182007_10029416 Ga0182007_100294162 137
167 3300015265 Ga0182005_1000020 Ga0182005_1000020224 137
168 3300025233 Ga0209437_101586 Ga0209437_1015861 137
169 3300025245 Ga0207425_1001104 Ga0207425_10011049 137
170 3300025246 Ga0209646_1000028 Ga0209646_1000028219 137
171 3300025295 Ga0209564_1000045 Ga0209564_1000045325 137
172 3300025295 Ga0209564_1000514 Ga0209564_100051415 137
173 3300025297 Ga0209758_1000149 Ga0209758_100014941 137
174 3300025728 Ga0207655_1004259 Ga0207655_10042598 137
175 3300027111 Ga0209281_1026884 Ga0209281_10268842 137
176 3300028794 Ga0307515_10291705 Ga0307515_102917052 137
177 3300030744 Ga0316181_1070941 Ga0316181_10709414 137
178 3300031456 Ga0307513_10651357 Ga0307513_106513572 137
179 3300041512 Ga0451853_4011651 Ga0451853_4011651_93_518 137
180 3300046452 Ga0495617_000006 Ga0495617_000006_276373_276882 137
181 3300046453 Ga0495627_000005 Ga0495627_000005_117861_118286 137
182 3300046453 Ga0495627_018741 Ga0495627_018741_1510_2019 137
183 3300046457 Ga0495590_0000003 Ga0495590_0000003_18245_18670 137
184 3300046460 Ga0495638_0000066 Ga0495638_0000066_143938_144363 137
185 3300046460 Ga0495638_0011525 Ga0495638_0011525_5295_5762 137
186 3300046460 Ga0495638_0039913 Ga0495638_0039913_205_630 137
187 3300046460 Ga0495638_0086538 Ga0495638_0086538_677_1186 137
188 3300046463 Ga0495653_0000011 Ga0495653_0000011_170414_170860 137
189 3300046471 Ga0495650_0000752 Ga0495650_0000752_16051_16497 137
190 3300046471 Ga0495650_0000801 Ga0495650_0000801_13837_14304 137
191 3300046471 Ga0495650_0002737 Ga0495650_0002737_65_574 137
192 3300046471 Ga0495650_0012015 Ga0495650_0012015_1196_1621 137
193 3300046474 Ga0495605_0000003 Ga0495605_0000003_278760_279188 137
194 3300046475 Ga0495639_0036134 Ga0495639_0036134_575_1000 137
195 3300046501 Ga0495607_0005286 Ga0495607_0005286_3541_3966 137
196 3300046501 Ga0495607_0019018 Ga0495607_0019018_49_558 137
197 3300046506 Ga0495583_0000079 Ga0495583_0000079_18122_18547 137
198 3300046507 Ga0495606_0000284 Ga0495606_0000284_16007_16516 137
199 3300046507 Ga0495606_0001123 Ga0495606_0001123_21586_22032 137
200 3300046507 Ga0495606_0001209 Ga0495606_0001209_18522_18947 137
201 3300046507 Ga0495606_0001720 Ga0495606_0001720_22132_22557 137
202 3300046507 Ga0495606_0012862 Ga0495606_0012862_2649_3074 137
203 3300046512 Ga0495610_0000004 Ga0495610_0000004_277354_277863 137
204 3300046512 Ga0495610_0003019 Ga0495610_0003019_10412_10921 137
205 3300046512 Ga0495610_0009867 Ga0495610_0009867_4199_4624 137
206 3300046512 Ga0495610_0015115 Ga0495610_0015115_549_974 137
207 3300046512 Ga0495610_0032982 Ga0495610_0032982_189_614 137
208 3300046512 Ga0495610_0052468 Ga0495610_0052468_1242_1667 137
209 3300046522 Ga0495643_0000269 Ga0495643_0000269_31330_31755 137
210 3300046522 Ga0495643_0000613 Ga0495643_0000613_17961_18386 137
211 3300046522 Ga0495643_0231425 Ga0495643_0231425_152_577 137
212 3300046524 Ga0495648_0000474 Ga0495648_0000474_24330_24755 137
213 3300046524 Ga0495648_0030693 Ga0495648_0030693_770_1195 137
214 3300046524 Ga0495648_0037087 Ga0495648_0037087_231_680 137
215 3300046524 Ga0495648_0093600 Ga0495648_0093600_1027_1536 137
216 3300046528 Ga0495642_0001206 Ga0495642_0001206_7470_7895 137
217 3300046528 Ga0495642_0056245 Ga0495642_0056245_919_1344 137
218 3300046530 Ga0495654_0009905 Ga0495654_0009905_3232_3741 137
219 3300046530 Ga0495654_0228774 Ga0495654_0228774_25_450 137
220 3300046538 Ga0495609_0050892 Ga0495609_0050892_255_680 137
221 3300046538 Ga0495609_0077165 Ga0495609_0077165_344_769 137
222 3300046538 Ga0495609_0141304 Ga0495609_0141304_466_891 137
223 3300046542 Ga0495597_0000170 Ga0495597_0000170_10584_11009 137
224 3300046542 Ga0495597_0000346 Ga0495597_0000346_16714_17139 137
225 3300046557 Ga0495622_0000884 Ga0495622_0000884_6397_6822 137
226 3300046558 Ga0495633_0000230 Ga0495633_0000230_35165_35590 137
227 3300046558 Ga0495633_0013937 Ga0495633_0013937_1141_1650 137
228 3300046558 Ga0495633_0040503 Ga0495633_0040503_10_519 137
229 3300046558 Ga0495633_0051547 Ga0495633_0051547_1244_1669 137
230 3300046558 Ga0495633_0120307 Ga0495633_0120307_267_692 137
231 3300046615 Ga0495656_0166320 Ga0495656_0166320_119_628 137
232 3300046616 Ga0495668_0000168 Ga0495668_0000168_79213_79638 137
233 3300046616 Ga0495668_0000729 Ga0495668_0000729_21881_22390 137
234 3300046616 Ga0495668_0001111 Ga0495668_0001111_21941_22450 137
235 3300046616 Ga0495668_0002565 Ga0495668_0002565_13110_13556 137
236 3300046660 Ga0495625_0000562 Ga0495625_0000562_35936_36361 137
237 3300046660 Ga0495625_0001427 Ga0495625_0001427_5069_5566 137
238 3300046660 Ga0495625_0007203 Ga0495625_0007203_1561_1986 137
239 3300046660 Ga0495625_0040585 Ga0495625_0040585_631_1056 137
240 3300046692 Ga0495671_0000001 Ga0495671_0000001_924606_925115 137
241 3300046692 Ga0495671_0096722 Ga0495671_0096722_536_961 137
242 3300046694 Ga0495649_0027173 Ga0495649_0027173_410_835 137
243 3300046694 Ga0495649_0145562 Ga0495649_0145562_62_487 137
244 3300046694 Ga0495649_0205397 Ga0495649_0205397_263_688 137
245 3300046810 Ga0495660_0000416 Ga0495660_0000416_21220_21645 137
246 3300046810 Ga0495660_0001974 Ga0495660_0001974_9318_9743 137
247 3300046810 Ga0495660_0005137 Ga0495660_0005137_4516_5025 137
248 3300047320 Ga0495672_0000379 Ga0495672_0000379_10594_11019 137
249 3300047323 Ga0495683_0016199 Ga0495683_0016199_847_1356 137
250 3300047446 Ga0495679_012804 Ga0495679_012804_1549_2058 137
251 3300047446 Ga0495679_130805 Ga0495679_130805_101_526 137
252 3300047469 Ga0495673_0000006 Ga0495673_0000006_239770_240267 137
253 3300047469 Ga0495673_0000014 Ga0495673_0000014_165091_165516 137
254 3300047469 Ga0495673_0000090 Ga0495673_0000090_130005_130514 137
255 3300047470 Ga0495681_0014127 Ga0495681_0014127_2232_2657 137
256 3300047472 Ga0495686_0118831 Ga0495686_0118831_608_1054 137
257 3300047472 Ga0495686_0257756 Ga0495686_0257756_423_932 137
258 3300048904 Ga0496101_0503349 Ga0496101_0503349_138_644 137
259 3300048918 Ga0496115_0483448 Ga0496115_0483448_135_644 137
260 3300048919 Ga0496116_0076251 Ga0496116_0076251_1349_1774 137
261 3300048919 Ga0496116_0329465 Ga0496116_0329465_56_505 137
262 3300048923 Ga0496120_0230019 Ga0496120_0230019_318_764 137
263 3300048924 Ga0496121_0047265 Ga0496121_0047265_248_676 137
264 3300048925 Ga0496122_0084284 Ga0496122_0084284_513_959 137
265 3300048926 Ga0496123_0019246 Ga0496123_0019246_1753_2199 137
266 3300048927 Ga0496124_0107264 Ga0496124_0107264_1147_1572 137
267 3300048927 Ga0496124_0628383 Ga0496124_0628383_239_667 137
268 3300048929 Ga0496126_0074117 Ga0496126_0074117_108_605 137
269 3300049459 Ga0495678_000016 Ga0495678_000016_86149_86574 137
270 3300049459 Ga0495678_000096 Ga0495678_000096_28879_29304 137
271 3300049459 Ga0495678_043363 Ga0495678_043363_1304_1729 137
272 3300049679 Ga0501249_009349 Ga0501249_009349_1325_1750 137
273 3300049766 Ga0501269_000086 Ga0501269_000086_19941_20366 137
274 3300053118 Ga0500594_0026650 Ga0500594_0026650_994_1443 137
275 3300053125 Ga0500618_000431 Ga0500618_000431_16794_17303 137
276 3300053145 Ga0500586_003312 Ga0500586_003312_1714_2223 137
277 3300053145 Ga0500586_018327 Ga0500586_018327_250_675 137
278 3300021361 Ga0213872_10000874 Ga0213872_100008743 138
279 3300021361 Ga0213872_10009471 Ga0213872_100094716 138
280 3300031711 Ga0265314_10055172 Ga0265314_100551722 138
281 3300039447 Ga0436361_0315037 Ga0436361_0315037_3240_3668 138
282 3300039447 Ga0436361_0321638 Ga0436361_0321638_3746_4174 138
283 3300039447 Ga0436361_0660666 Ga0436361_0660666_110_538 138
284 3300044706 Ga0466964_0474903 Ga0466964_0474903_167_595 138
285 3300046471 Ga0495650_0000352 Ga0495650_0000352_10642_11070 138
286 3300046507 Ga0495606_0002639 Ga0495606_0002639_18528_18956 138
287 3300046528 Ga0495642_0121290 Ga0495642_0121290_423_851 138
288 3300046557 Ga0495622_0000928 Ga0495622_0000928_6513_6941 138
289 3300046664 Ga0495659_0369320 Ga0495659_0369320_163_591 138
290 3300046694 Ga0495649_0076656 Ga0495649_0076656_41_469 138
291 3300053161 Ga0500634_0238162 Ga0500634_0238162_259_678 139
292 3300002704 JGI25155J39150_1000228 JGI25155J39150_10002285 140
293 3300002705 JGI25156J39149_1000152 JGI25156J39149_100015233 140
294 3300002738 JGI25154J39366_1000166 JGI25154J39366_100016633 140
295 3300002741 JGI25157J39369_1000104 JGI25157J39369_100010433 140
296 3300003758 Ga0055532_1000015 Ga0055532_100001573 140
297 3300005563 Ga0068855_100393133 Ga0068855_1003931332 140
298 3300005578 Ga0068854_101024277 Ga0068854_1010242772 140
299 3300005614 Ga0068856_100220045 Ga0068856_1002200453 140
300 3300005616 Ga0068852_100308937 Ga0068852_1003089372 140
301 3300009093 Ga0105240_10001159 Ga0105240_1000115918 140
302 3300009551 Ga0105238_10019289 Ga0105238_100192895 140
303 3300010375 Ga0105239_10429568 Ga0105239_104295683 140
304 3300014497 Ga0182008_10018322 Ga0182008_100183225 140
305 3300025206 Ga0209435_100035 Ga0209435_10003573 140
306 3300025229 Ga0209147_100004 Ga0209147_100004639 140
307 3300025246 Ga0209646_1000146 Ga0209646_100014674 140
308 3300025250 Ga0209026_1000165 Ga0209026_100016533 140
309 3300025256 Ga0209759_1000095 Ga0209759_100009575 140
310 3300025272 Ga0209455_1002130 Ga0209455_10021309 140
311 3300025735 Ga0207713_1046683 Ga0207713_10466831 140
312 3300025913 Ga0207695_10004237 Ga0207695_100042375 140
313 3300025924 Ga0207694_10180526 Ga0207694_101805262 140
314 3300025949 Ga0207667_10016340 Ga0207667_100163404 140
315 3300025981 Ga0207640_10871743 Ga0207640_108717431 140
316 3300026078 Ga0207702_10408442 Ga0207702_104084421 140
317 3300026142 Ga0207698_11176700 Ga0207698_111767001 140
318 3300046530 Ga0495654_0089331 Ga0495654_0089331_258_680 140
319 3300046660 Ga0495625_0002051 Ga0495625_0002051_14141_14563 140
320 3300048919 Ga0496116_0002821 Ga0496116_0002821_8191_8613 140
321 3300048924 Ga0496121_0152775 Ga0496121_0152775_724_1146 140
322 3300048924 Ga0496121_0354902 Ga0496121_0354902_192_614 140
323 3300048924 Ga0496121_0544682 Ga0496121_0544682_217_639 140
324 3300048925 Ga0496122_0002624 Ga0496122_0002624_23586_24008 140
325 3300048926 Ga0496123_0000441 Ga0496123_0000441_23603_24025 140
326 3300048927 Ga0496124_0251280 Ga0496124_0251280_707_1129 140
327 3300048928 Ga0496125_0005009 Ga0496125_0005009_11197_11619 140

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00460

Flg_bb_rod

Flagella basal body rod protein

37

67

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7nvg-assembly1.cif.gz_l2 salmonella flagellar basal body refined in c1 map 0.9179 9 43
7nvg-assembly1.cif.gz_q2 salmonella flagellar basal body refined in c1 map 0.9079 9 43
7cgo-assembly1.cif.gz_R cryo-em structure of the flagellar motor-hook complex from salmonella 0.9006 9 43
7cgo-assembly1.cif.gz_P cryo-em structure of the flagellar motor-hook complex from salmonella 0.9 11 43
7cgo-assembly1.cif.gz_N cryo-em structure of the flagellar motor-hook complex from salmonella 0.8956 11 43
ID Description Score Start End Superfamily
af_Q15884_1_109_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5389 1 129 1.20.140.150
af_Q15884_1_109_1.20.140.150 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3; 0.5307 1 129 1.20.140.150
af_Q17428_1_214_1.20.120.550 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Membrane associated eicosanoid/glutathione metabolism-like domain 0.4782 10 64 1.20.120.550
af_Q17827_3_116_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4763 4 136 1.10.287.370
af_Q4DCS0_16_144_1.10.287.370 Mainly Alpha;Orthogonal Bundle;Helix Hairpins; 0.4014 6 139 1.10.287.370
ID Description Score Start End GO Terms
AF-A0A3M1A1Z7-F1-model_v4 Flagellar hook-associated protein 1 (HAP1) 0.9603 3 43 GO:0005198
GO:0005576
GO:0009424
GO:0044780
AF-A0A2T3KMR3-F1-model_v4 Flagellar hook-associated protein 1 (HAP1) 0.9599 1 43 GO:0005198
GO:0005576
GO:0009424
GO:0044780
AF-A0A081ND28-F1-model_v4 Flagellar basal-body rod protein FlgF 0.9542 6 43 GO:0030694
GO:0071978
AF-A0A520RFM6-F1-model_v4 Flagellar hook protein FlgE 0.9516 5 44 GO:0005829
GO:0009424
GO:0009425
GO:0071978
AF-A0A087LUW4-F1-model_v4 Flagellar hook-associated protein 1 0.9491 12 44 GO:0005198
GO:0005576
GO:0009424
GO:0044780

Feature Viewer

pLDDT pTM Quality
63.69 0.5 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map