F408574

General Info

Members Datasets Scaffolds Average Seq Length
326 262 216 911

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2643221631|2644178833
Length 917
Sequence DKILRAGEGKTLRKLQRIAAQVNSIEEDFVNLTDDELRALTDEYKQRLADGETLDDILPEAFATVREAAKRVLGQRHYDVQLMGGAALHLGFVAEMRTGEGKTLVGTLPAYLNALTGKGVHLITVNDYLAERDSEWMGRVHRFLGLEVGVILGSMSPAERKRQYAMDITYGTNNEFGFDYLRDNMAWSQDELVQRGHNFAVVDEVDSILIDEARTPLIISGPADQATKWYADFAKLVQRLKRDRDYEVDEKKRTVGVLEEGVGRVEDYLGIDNLYESVNTPLVGFLNNAIKAKELYKNDKDYVVMNGEVMIVDEHTGRMLAGRRYNEGMHQAIEAKEGVEVQNENQTLATVTLQNFFRLYDKLGGMTGTATTEAAEFHQIYKLGVVPIPTNKNPLRIDQPDLIYKSEPAKFAAVVEDIVEKHEKGQPILVGTVSVEKSEYLSQELRKRGVPHEVLNAKHHEREAQIVAQAGRKGAVTVATNMAGRGTDIMLGGNADHLAAAELAQRGLTELDTPDEYEAAFPAALEKAKAAVKAEQEEVQSIGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLSLGDDLMRLFKAGMVERVLAMANVPEDVPIESKMVTRAIASAQTQVEQQNFEIRKNVLKYDEVLNRQREVIYGERRRVLEGEDLQEQVGHFMDDTVAAYVGAATGEGFEDDWDLDKLWTALKQLYPLTLELEELEEEAGGPAGLTSEFLTKVLQEDIQAQYGAREDQLGSEIMRELERRVVLSVLDRRWREHLYEMDYLQEGIGLRAMAQRDPLVEYQREGFDMFGAMMEGIKEESVGYLFNLEVQVEQQVEEVPLADTEETLARLEKDAAASRPEIKAKGLEVPKPQRLHYTAPSVDGDETVVEGDFEDTLGAEEGDGLTRAERRKAARAAKGRRRK

Samples

Sample ID Description Type Environment
1 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
2 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
3 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
4 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
5 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
6 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
7 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
8 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
9 2643221548 Streptomyces sp. Root55 Isolate Unclassified
10 2643221575 Microbacterium sp. Root61 Isolate Unclassified
11 2643221578 Streptomyces sp. Root63 Isolate Unclassified
12 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
13 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
14 2643221613 Oerskovia sp. Root22 Isolate Unclassified
15 2643221616 Leifsonia sp. Root227 Isolate Unclassified
16 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
17 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
18 2643221649 Leifsonia sp. Root4 Isolate Unclassified
19 2643221670 Streptomyces sp. Root431 Isolate Unclassified
20 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
21 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
22 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
23 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
24 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
25 2643221721 Oerskovia sp. Root918 Isolate Unclassified
26 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
27 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
28 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
29 2739367653 Kocuria sp. OV113 Isolate Unclassified
30 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
31 2773857759 Microbacterium sp. 1294 Isolate Unclassified
32 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
33 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
34 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
35 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
36 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
37 2816332305 Kocuria rhizophila FDAARGOS_302 Isolate Rhizosphere
38 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
39 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
40 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
41 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
42 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
43 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
44 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
45 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
46 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
47 2857710386 Brevibacterium sp. R-73093 Isolate Unclassified
48 2857727296 Kocuria sp. R-72562 Isolate Unclassified
49 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
50 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
51 2862574272 Streptomyces sp. AcE210 Isolate Nodule
52 2867369537 Streptomyces sp. Z26 Isolate Unclassified
53 2867475112 Streptomyces sp. TM32 Isolate Unclassified
54 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
55 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
56 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
57 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
58 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
59 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
60 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
61 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
62 2905926851 Arthrobacter sedimenti MIC A30 Isolate Rhizosphere
63 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
64 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
65 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
66 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
67 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
68 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
69 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
70 2920879853 Kocuria salina CV6 Isolate Unclassified
71 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
72 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
73 2928153084 Leifsonia sp. 563 Isolate Unclassified
74 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
75 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
76 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
77 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
78 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
79 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
80 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
81 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
82 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
83 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
84 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
85 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
86 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
87 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
88 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
89 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
90 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
91 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
92 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
93 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
94 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
95 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
96 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
97 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
98 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
99 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
100 3300003285 Grassland soil microbial communities from Hopland, California, USA - Sample H3_Rhizo_39 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
101 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
102 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
103 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
104 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
105 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
106 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
107 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
108 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
109 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
110 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
111 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
112 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
113 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
114 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
115 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
116 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
117 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
118 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
119 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
120 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
121 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
122 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
123 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
124 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
125 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
130 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
131 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
132 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
133 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
134 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
135 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
136 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
137 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
145 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
146 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
147 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
148 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
149 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
150 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
151 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
152 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
153 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
154 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
155 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
156 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
157 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
158 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
159 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
160 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
161 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
162 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
163 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
164 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
165 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
166 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
167 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
168 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
169 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
170 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
171 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
172 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
173 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
174 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
175 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
176 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
177 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
178 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
179 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
180 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
181 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
182 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
183 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
184 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
185 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
186 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
187 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
188 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
189 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
190 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
191 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
192 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
193 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
194 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
195 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
196 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
197 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
198 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
199 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
200 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
201 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
202 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
203 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
204 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
205 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
206 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
207 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
208 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
209 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
210 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
211 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
212 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
213 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
214 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
215 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
216 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
217 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
218 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
219 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
220 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
221 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
222 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
223 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
224 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
225 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
226 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
228 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
229 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
230 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
231 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
232 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
233 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
234 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
235 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
236 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
237 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
238 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
239 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
240 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
241 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
242 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
243 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
244 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
245 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
246 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
247 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
248 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
249 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
250 8002811521 Leucobacter chinensis NC76-1 Isolate Rhizosphere
251 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
252 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
253 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
254 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
255 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
256 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
257 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
258 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
259 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
260 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
261 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
262 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 65.34
Metatranscriptomes 0.92
Isolates 33.74

Biome Distribution

Category Percentage (%)
Aerial Root 0.61
Bulb 0
Endosphere 11.66
Nodule 0.31
Rhizoplane 1.84
Rhizosphere 58.9
Stem 0
Stem Tuber 0
Unclassified 26.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25164J39214_1000655 3300002772 Bacteria 14173
2 JGI25165J46597_1000044 3300003214 Bacteria 263289
3 Ga0007423J48922_100318 3300003285 Bacteria 5155
4 Ga0055539_1000027 3300003752 Bacteria 258020
5 Ga0055533_1000020 3300003756 Bacteria 353998
6 Ga0055525_1000151 3300003759 Bacteria 94158
7 Ga0055527_1000005 3300003760 Bacteria 504776
8 Ga0055542_1000006 3300003762 Bacteria 504776
9 Ga0055529_1000013 3300003763 Bacteria 373267
10 Ga0055541_1000849 3300003841 Bacteria 7476
11 Ga0070658_10000330 3300005327 Bacteria 40639
12 Ga0070658_10006072 3300005327 Bacteria 9795
13 Ga0070659_100014681 3300005366 Bacteria 5856
14 Ga0068852_100000700 3300005616 Bacteria 21917
15 Ga0068861_100032707 3300005719 Bacteria 3832
16 Ga0068851_10000001 3300005834 Bacteria 495512
17 Ga0081539_10018597 3300005985 Bacteria 4812
18 Ga0081539_10021092 3300005985 Bacteria 4369
19 Ga0075365_10008027 3300006038 Bacteria 5960
20 Ga0075363_100016944 3300006048 Bacteria 3606
21 Ga0075367_10001429 3300006178 Bacteria 10243
22 Ga0105237_10000738 3300009545 Bacteria 45118
23 Ga0105238_10003348 3300009551 Bacteria 15990
24 Ga0157371_10001174 3300013102 Bacteria 28121
25 Ga0157371_10037621 3300013102 Bacteria 3462
26 Ga0157370_10004526 3300013104 Bacteria 15930
27 Ga0157369_10000103 3300013105 Bacteria 118273
28 Ga0157369_10010472 3300013105 Bacteria 10561
29 Ga0206354_10250894 3300020081 Bacteria 4931
30 Ga0206353_10548987 3300020082 Bacteria 12280
31 Ga0213875_10007833 3300021388 Bacteria 5488
32 Ga0209566_100043 3300025225 Bacteria 266609
33 Ga0209674_100001 3300025226 Bacteria 4013750
34 Ga0209672_100003 3300025228 Bacteria 1560476
35 Ga0209147_100465 3300025229 Bacteria 24951
36 Ga0209563_100001 3300025230 Bacteria 4013775
37 Ga0209563_100241 3300025230 Bacteria 26299
38 Ga0207427_100077 3300025231 Bacteria 149591
39 Ga0209437_100490 3300025233 Bacteria 29074
40 Ga0209677_100001 3300025253 Bacteria 4013787
41 Ga0209148_1000004 3300025254 Bacteria 1844481
42 Ga0209233_1000014 3300025261 Bacteria 996641
43 Ga0209455_1000046 3300025272 Bacteria 382681
44 Ga0209758_1002554 3300025297 Bacteria 18334
45 Ga0207656_10000002 3300025321 Bacteria 792178
46 Ga0207655_1005052 3300025728 Bacteria 9121
47 Ga0207647_10017516 3300025904 Bacteria 4869
48 Ga0207705_10000001 3300025909 Bacteria 2061880
49 Ga0207671_10000002 3300025914 Bacteria 1144816
50 Ga0207694_10000022 3300025924 Bacteria 288900
51 Ga0207698_10000063 3300026142 Bacteria 72803
52 Ga0207698_10000323 3300026142 Bacteria 28504
53 Ga0207428_10001744 3300027907 Bacteria 22274
54 Ga0307517_10018760 3300028786 Bacteria 8923
55 Ga0307515_10053741 3300028794 Bacteria 5932
56 Ga0307512_10032302 3300030522 Bacteria 4521
57 Ga0307512_10033149 3300030522 Bacteria 4446
58 Ga0307513_10046212 3300031456 Bacteria 4750
59 Ga0307408_100003596 3300031548 Bacteria 10555
60 Ga0307508_10006968 3300031616 Bacteria 10541
61 Ga0307508_10008074 3300031616 Bacteria 9761
62 Ga0307514_10030407 3300031649 Bacteria 4335
63 Ga0307405_10013821 3300031731 Bacteria 4318
64 Ga0307406_10000712 3300031901 Bacteria 18735
65 Ga0307406_10002614 3300031901 Bacteria 9810
66 Ga0307409_100002762 3300031995 Bacteria 9278
67 Ga0307416_100005999 3300032002 Bacteria 7554
68 Ga0307416_100014323 3300032002 Bacteria 5429
69 Ga0307414_10005690 3300032004 Bacteria 6881
70 Ga0307507_10014493 3300033179 Bacteria 9390
71 Ga0395898_0025358 3300037466 Bacteria 5975
72 Ga0395898_0046860 3300037466 Bacteria 4245
73 Ga0436364_0077614 3300037853 Bacteria 12761
74 Ga0400485_08773 3300038735 Bacteria 119523
75 Ga0400486_27583 3300038742 Bacteria 18353
76 Ga0439442_000001 3300042002 Bacteria 161142
77 Ga0439449_0002837 3300042007 Bacteria 6738
78 Ga0439457_005436 3300042014 Bacteria 3208
79 Ga0450907_000136 3300042146 Bacteria 28005
80 Ga0439434_0001269 3300042435 Bacteria 7262
81 Ga0450918_000474 3300042531 Bacteria 8557
82 Ga0466970_0000056 3300044765 Bacteria 43205
83 Ga0466970_0009318 3300044765 Bacteria 4958
84 Ga0466957_0026314 3300044842 Bacteria 3451
85 Ga0466960_0013867 3300044901 Bacteria 3433
86 Ga0466959_0004019 3300045049 Bacteria 9774
87 Ga0495592_0024849 3300046454 Bacteria 4552
88 Ga0495590_0000336 3300046457 Bacteria 24394
89 Ga0495629_0005284 3300046459 Bacteria 9654
90 Ga0495629_0011798 3300046459 Bacteria 6340
91 Ga0495629_0012853 3300046459 Bacteria 6055
92 Ga0495651_0000755 3300046462 Bacteria 25003
93 Ga0495651_0010101 3300046462 Bacteria 7251
94 Ga0495651_0019403 3300046462 Bacteria 5270
95 Ga0495664_0000276 3300046477 Bacteria 24487
96 Ga0495585_0018469 3300046492 Bacteria 4020
97 Ga0495596_0012770 3300046500 Bacteria 3582
98 Ga0495606_0016274 3300046507 Bacteria 5678
99 Ga0495616_0014410 3300046513 Bacteria 4425
100 Ga0495628_0027486 3300046516 Bacteria 4628
101 Ga0495631_0002908 3300046518 Bacteria 9489
102 Ga0495643_0003252 3300046522 Bacteria 12022
103 Ga0495654_0016992 3300046530 Bacteria 3831
104 Ga0495587_0007540 3300046536 Bacteria 7045
105 Ga0495609_0015489 3300046538 Bacteria 3569
106 Ga0495645_0012402 3300046543 Bacteria 6007
107 Ga0495634_0000467 3300046642 Bacteria 40017
108 Ga0495634_0040715 3300046642 Bacteria 3157
109 Ga0495625_0006514 3300046660 Bacteria 10372
110 Ga0495635_0000788 3300046663 Bacteria 20646
111 Ga0495646_0000179 3300046680 Bacteria 31613
112 Ga0495613_0002960 3300046689 Bacteria 12713
113 Ga0495624_0028091 3300046690 Bacteria 3678
114 Ga0495671_0013696 3300046692 Bacteria 4382
115 Ga0495600_0009000 3300046809 Bacteria 6151
116 Ga0495600_0015333 3300046809 Bacteria 4843
117 Ga0495674_0033098 3300047319 Bacteria 4685
118 Ga0495676_0004086 3300047321 Bacteria 13294
119 Ga0495676_0052703 3300047321 Bacteria 3245
120 Ga0495681_0005252 3300047470 Bacteria 8697
121 Ga0495681_0010010 3300047470 Bacteria 5775
122 Ga0495593_0001357 3300047673 Bacteria 14297
123 Ga0495614_0000193 3300048089 Bacteria 23115
124 Ga0496103_0004003 3300048906 Bacteria 8949
125 Ga0496105_0039554 3300048908 Bacteria 3887
126 Ga0496111_0023212 3300048914 Bacteria 4354
127 Ga0496113_0033606 3300048916 Bacteria 3736
128 Ga0496114_0039165 3300048917 Bacteria 3921
129 Ga0496115_0002074 3300048918 Bacteria 14353
130 Ga0496117_0011562 3300048920 Bacteria 7897
131 Ga0496117_0014794 3300048920 Bacteria 6696
132 Ga0496117_0016000 3300048920 Bacteria 6354
133 Ga0496118_0000640 3300048921 Bacteria 57413
134 Ga0496118_0014550 3300048921 Bacteria 7356
135 Ga0496119_0002830 3300048922 Bacteria 18551
136 Ga0496119_0006102 3300048922 Bacteria 11287
137 Ga0496119_0008109 3300048922 Bacteria 9307
138 Ga0496119_0024042 3300048922 Bacteria 4300
139 Ga0496121_0000025 3300048924 Bacteria 453467
140 Ga0496122_0000020 3300048925 Bacteria 401675
141 Ga0496122_0000534 3300048925 Bacteria 78704
142 Ga0496122_0000877 3300048925 Bacteria 56353
143 Ga0496122_0001607 3300048925 Bacteria 35329
144 Ga0496123_0000003 3300048926 Bacteria 866556
145 Ga0496123_0000142 3300048926 Bacteria 146932
146 Ga0496123_0001128 3300048926 Bacteria 39884
147 Ga0496123_0009800 3300048926 Bacteria 8558
148 Ga0496124_0000070 3300048927 Bacteria 220875
149 Ga0496124_0000461 3300048927 Bacteria 70566
150 Ga0496124_0006489 3300048927 Bacteria 12734
151 Ga0496125_0000120 3300048928 Bacteria 175991
152 Ga0496125_0000214 3300048928 Bacteria 118625
153 Ga0496125_0001049 3300048928 Bacteria 42719
154 Ga0496125_0002055 3300048928 Bacteria 27192
155 Ga0496126_0005931 3300048929 Bacteria 13770
156 Ga0501031_0002835 3300049568 Bacteria 11064
157 Ga0501033_0019768 3300049570 Bacteria 5090
158 Ga0501034_0006138 3300049571 Bacteria 12954
159 Ga0501034_0009553 3300049571 Bacteria 10153
160 Ga0501034_0015998 3300049571 Bacteria 7701
161 Ga0501036_0007340 3300049572 Bacteria 8981
162 Ga0501036_0021744 3300049572 Bacteria 5392
163 Ga0501037_0003899 3300049573 Bacteria 10824
164 Ga0501037_0004961 3300049573 Bacteria 9676
165 Ga0501038_0004309 3300049574 Bacteria 13228
166 Ga0501038_0013010 3300049574 Bacteria 7589
167 Ga0501038_0038577 3300049574 Bacteria 4182
168 Ga0501038_0054457 3300049574 Bacteria 3441
169 Ga0501041_0010248 3300049577 Bacteria 5522
170 Ga0501042_0012152 3300049578 Bacteria 5825
171 Ga0501043_0053021 3300049579 Bacteria 3185
172 Ga0501046_0002804 3300049580 Bacteria 16232
173 Ga0501046_0022600 3300049580 Bacteria 5180
174 Ga0501047_0000254 3300049581 Bacteria 63304
175 Ga0501047_0000770 3300049581 Bacteria 33540
176 Ga0501047_0001034 3300049581 Bacteria 27873
177 Ga0501047_0010677 3300049581 Bacteria 8678
178 Ga0501047_0020789 3300049581 Bacteria 6305
179 Ga0501067_0012464 3300049583 Bacteria 4716
180 Ga0501068_0006421 3300049584 Bacteria 6481
181 Ga0501070_0000044 3300049586 Bacteria 108859
182 Ga0501071_0000109 3300049587 Bacteria 32090
183 Ga0501071_0000629 3300049587 Bacteria 18329
184 Ga0501073_0000048 3300049589 Bacteria 76634
185 Ga0501073_0005223 3300049589 Bacteria 9737
186 Ga0501076_0014334 3300049592 Bacteria 5969
187 Ga0501079_0008455 3300049741 Bacteria 7802
188 Ga0501080_0000038 3300049742 Bacteria 82193
189 Ga0501083_0004610 3300049744 Bacteria 9738
190 Ga0501083_0028916 3300049744 Bacteria 3817
191 Ga0501035_0003710 3300049822 Bacteria 14561
192 Ga0501035_0012886 3300049822 Bacteria 7721
193 Ga0501035_0015192 3300049822 Bacteria 7106
194 Ga0501035_0019704 3300049822 Bacteria 6198
195 Ga0501035_0043583 3300049822 Bacteria 4042
196 Ga0501035_0047946 3300049822 Bacteria 3832
197 Ga0501044_0002753 3300049823 Bacteria 20011
198 Ga0501044_0003304 3300049823 Bacteria 18172
199 Ga0501044_0003539 3300049823 Bacteria 17583
200 Ga0501044_0009605 3300049823 Bacteria 10526
201 Ga0501044_0043313 3300049823 Bacteria 4677
202 nmdc:mga0yw44_5947_c1 3300050492 Bacteria 5837
203 Ga0500635_0000004 3300053080 Bacteria 210675
204 Ga0495655_0001801 3300053083 Bacteria 3336
205 Ga0500643_000285 3300053087 Bacteria 43666
206 Ga0500556_0000168 3300053104 Bacteria 53779
207 Ga0500593_000670 3300053117 Bacteria 13053
208 Ga0500559_0001220 3300053136 Bacteria 15228
209 Ga0500559_0004611 3300053136 Bacteria 6511
210 Ga0500559_0006405 3300053136 Bacteria 5318
211 Ga0500568_0000044 3300053139 Bacteria 126099
212 Ga0500573_0000001 3300053140 Bacteria 436394
213 Ga0500573_0010087 3300053140 Bacteria 5264
214 Ga0500616_0001065 3300053153 Bacteria 28823
215 Ga0500645_002149 3300053730 Bacteria 9043
216 Ga0501084_0004001 3300054114 Bacteria 12003

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049579 Ga0501043_0053021 Ga0501043_0053021_12_2573 752
2 3300046459 Ga0495629_0012853 Ga0495629_0012853_75_2645 768
3 3300047321 Ga0495676_0004086 Ga0495676_0004086_115_2898 817
4 3300046462 Ga0495651_0010101 Ga0495651_0010101_2475_5273 824
5 3300046642 Ga0495634_0040715 Ga0495634_0040715_242_3040 824
6 3300046689 Ga0495613_0002960 Ga0495613_0002960_8217_11015 824
7 3300046690 Ga0495624_0028091 Ga0495624_0028091_857_3655 824
8 3300049568 Ga0501031_0002835 Ga0501031_0002835_4132_6909 829
9 3300049571 Ga0501034_0006138 Ga0501034_0006138_906_3683 829
10 3300049573 Ga0501037_0004961 Ga0501037_0004961_6008_8785 829
11 3300049581 Ga0501047_0001034 Ga0501047_0001034_12694_15471 829
12 3300049741 Ga0501079_0008455 Ga0501079_0008455_1453_4230 829
13 3300054114 Ga0501084_0004001 Ga0501084_0004001_7384_10161 829
14 iso_pu_bacteria 2839986021 2839987250 830
15 3300049822 Ga0501035_0015192 Ga0501035_0015192_395_3256 831
16 3300049574 Ga0501038_0013010 Ga0501038_0013010_4514_7375 833
17 3300049822 Ga0501035_0043583 Ga0501035_0043583_75_2882 833
18 3300049581 Ga0501047_0000254 Ga0501047_0000254_47726_50542 835
19 3300049574 Ga0501038_0038577 Ga0501038_0038577_514_3312 836
20 3300049577 Ga0501041_0010248 Ga0501041_0010248_946_3744 836
21 3300049578 Ga0501042_0012152 Ga0501042_0012152_1453_4251 836
22 3300049583 Ga0501067_0012464 Ga0501067_0012464_902_3700 836
23 3300049587 Ga0501071_0000629 Ga0501071_0000629_14408_17206 836
24 3300049592 Ga0501076_0014334 Ga0501076_0014334_3149_5947 836
25 3300049744 Ga0501083_0028916 Ga0501083_0028916_986_3784 836
26 3300049823 Ga0501044_0003304 Ga0501044_0003304_191_2989 836
27 3300049584 Ga0501068_0006421 Ga0501068_0006421_686_3808 837
28 3300049570 Ga0501033_0019768 Ga0501033_0019768_757_3615 838
29 3300031616 Ga0307508_10006968 Ga0307508_100069688 843
30 iso_pu_bacteria 2835188231 2835189748 847
31 3300021388 Ga0213875_10007833 Ga0213875_100078333 848
32 3300047321 Ga0495676_0052703 Ga0495676_0052703_300_3125 848
33 3300049822 Ga0501035_0012886 Ga0501035_0012886_3832_6660 848
34 3300049823 Ga0501044_0009605 Ga0501044_0009605_3718_6546 848
35 iso_pu_bacteria 2905926851 2905927735 848
36 3300037853 Ga0436364_0077614 Ga0436364_0077614_5446_8271 849
37 3300049572 Ga0501036_0007340 Ga0501036_0007340_3031_5952 849
38 3300025297 Ga0209758_1002554 Ga0209758_100255415 850
39 3300048089 Ga0495614_0000193 Ga0495614_0000193_3886_6711 853
40 3300031901 Ga0307406_10002614 Ga0307406_100026144 855
41 3300032004 Ga0307414_10005690 Ga0307414_100056903 855
42 3300053087 Ga0500643_000285 Ga0500643_000285_38375_41179 855
43 3300048925 Ga0496122_0000877 Ga0496122_0000877_49_2838 857
44 3300048926 Ga0496123_0000142 Ga0496123_0000142_79292_82081 857
45 3300048927 Ga0496124_0000461 Ga0496124_0000461_64161_66950 857
46 3300042007 Ga0439449_0002837 Ga0439449_0002837_3126_5810 858
47 3300042014 Ga0439457_005436 Ga0439457_005436_60_2744 858
48 3300042002 Ga0439442_000001 Ga0439442_000001_80203_82941 861
49 3300042146 Ga0450907_000136 Ga0450907_000136_14083_16821 861
50 3300042435 Ga0439434_0001269 Ga0439434_0001269_2398_5136 861
51 3300042531 Ga0450918_000474 Ga0450918_000474_4417_7155 861
52 3300028786 Ga0307517_10018760 Ga0307517_100187607 863
53 3300033179 Ga0307507_10014493 Ga0307507_100144937 863
54 3300046459 Ga0495629_0005284 Ga0495629_0005284_3191_6007 863
55 3300046660 Ga0495625_0006514 Ga0495625_0006514_349_3165 863
56 3300046692 Ga0495671_0013696 Ga0495671_0013696_231_3047 863
57 3300047470 Ga0495681_0005252 Ga0495681_0005252_348_3164 863
58 3300049571 Ga0501034_0009553 Ga0501034_0009553_6436_9273 863
59 3300049822 Ga0501035_0019704 Ga0501035_0019704_2882_5719 863
60 3300046500 Ga0495596_0012770 Ga0495596_0012770_49_2844 864
61 3300046522 Ga0495643_0003252 Ga0495643_0003252_8843_11638 864
62 3300025904 Ga0207647_10017516 Ga0207647_100175162 866
63 3300037466 Ga0395898_0046860 Ga0395898_0046860_721_3534 867
64 3300049822 Ga0501035_0003710 Ga0501035_0003710_7510_10326 867
65 3300049574 Ga0501038_0004309 Ga0501038_0004309_10427_13198 868
66 3300049580 Ga0501046_0002804 Ga0501046_0002804_2619_5390 868
67 3300049581 Ga0501047_0010677 Ga0501047_0010677_5605_8376 868
68 3300049744 Ga0501083_0004610 Ga0501083_0004610_4022_6793 868
69 3300049822 Ga0501035_0047946 Ga0501035_0047946_480_3251 868
70 3300049823 Ga0501044_0002753 Ga0501044_0002753_4990_7761 868
71 3300049823 Ga0501044_0043313 Ga0501044_0043313_963_3905 868
72 3300031456 Ga0307513_10046212 Ga0307513_100462122 869
73 3300013102 Ga0157371_10037621 Ga0157371_100376212 871
74 3300013104 Ga0157370_10004526 Ga0157370_1000452610 871
75 3300049573 Ga0501037_0003899 Ga0501037_0003899_6318_9176 871
76 3300049581 Ga0501047_0000770 Ga0501047_0000770_3756_6614 871
77 3300049823 Ga0501044_0003539 Ga0501044_0003539_6226_9084 871
78 3300005985 Ga0081539_10018597 Ga0081539_100185973 872
79 3300038735 Ga0400485_08773 Ga0400485_08773_95701_98592 872
80 3300038742 Ga0400486_27583 Ga0400486_27583_8179_11070 872
81 3300046516 Ga0495628_0027486 Ga0495628_0027486_1588_4368 872
82 iso_pu_bacteria 2554235227 2555231363 872
83 iso_pu_bacteria 2654587600 2655033027 872
84 3300048928 Ga0496125_0000214 Ga0496125_0000214_29501_32314 873
85 3300048924 Ga0496121_0000025 Ga0496121_0000025_203597_206434 874
86 3300027907 Ga0207428_10001744 Ga0207428_100017445 875
87 3300031995 Ga0307409_100002762 Ga0307409_1000027621 876
88 3300032002 Ga0307416_100014323 Ga0307416_1000143231 876
89 3300046454 Ga0495592_0024849 Ga0495592_0024849_217_3012 876
90 3300046462 Ga0495651_0019403 Ga0495651_0019403_1587_4382 876
91 3300046492 Ga0495585_0018469 Ga0495585_0018469_1206_4001 876
92 3300046507 Ga0495606_0016274 Ga0495606_0016274_68_2863 876
93 3300046513 Ga0495616_0014410 Ga0495616_0014410_559_3354 876
94 3300046518 Ga0495631_0002908 Ga0495631_0002908_6628_9423 876
95 3300046530 Ga0495654_0016992 Ga0495654_0016992_510_3305 876
96 3300046538 Ga0495609_0015489 Ga0495609_0015489_67_2862 876
97 3300046809 Ga0495600_0015333 Ga0495600_0015333_541_3336 876
98 3300047319 Ga0495674_0033098 Ga0495674_0033098_679_3474 876
99 3300047470 Ga0495681_0010010 Ga0495681_0010010_2112_4907 876
100 3300048928 Ga0496125_0002055 Ga0496125_0002055_24322_27147 876
101 3300003285 Ga0007423J48922_100318 Ga0007423J48922_1003183 877
102 3300037466 Ga0395898_0025358 Ga0395898_0025358_1994_4735 877
103 3300031548 Ga0307408_100003596 Ga0307408_1000035968 878
104 3300030522 Ga0307512_10033149 Ga0307512_100331492 879
105 3300031616 Ga0307508_10008074 Ga0307508_100080745 879
106 3300048925 Ga0496122_0001607 Ga0496122_0001607_6995_9799 879
107 3300048926 Ga0496123_0001128 Ga0496123_0001128_43_2847 879
108 3300053730 Ga0500645_002149 Ga0500645_002149_5024_7939 879
109 iso_pu_bacteria 2857710386 2857713246 879
110 3300028794 Ga0307515_10053741 Ga0307515_100537413 880
111 3300030522 Ga0307512_10032302 Ga0307512_100323022 880
112 3300031649 Ga0307514_10030407 Ga0307514_100304072 880
113 3300048920 Ga0496117_0016000 Ga0496117_0016000_3140_5950 880
114 3300046459 Ga0495629_0011798 Ga0495629_0011798_2247_5039 881
115 3300046462 Ga0495651_0000755 Ga0495651_0000755_16204_18996 881
116 3300046477 Ga0495664_0000276 Ga0495664_0000276_16262_19054 881
117 3300046536 Ga0495587_0007540 Ga0495587_0007540_3444_6236 881
118 3300046543 Ga0495645_0012402 Ga0495645_0012402_537_3329 881
119 3300046642 Ga0495634_0000467 Ga0495634_0000467_17509_20301 881
120 3300046663 Ga0495635_0000788 Ga0495635_0000788_357_3149 881
121 3300046680 Ga0495646_0000179 Ga0495646_0000179_15220_18012 881
122 3300046809 Ga0495600_0009000 Ga0495600_0009000_2247_5039 881
123 3300047673 Ga0495593_0001357 Ga0495593_0001357_5617_8409 881
124 3300049587 Ga0501071_0000109 Ga0501071_0000109_6690_9530 881
125 iso_pu_bacteria 2616644941 2616906016 881
126 iso_pu_bacteria 2643221587 2643944339 881
127 iso_pu_bacteria 2643221670 2644385742 881
128 iso_pu_bacteria 2643221677 2644431237 881
129 iso_pu_bacteria 2862574272 2862579567 881
130 iso_pu_bacteria 3006486233 3006486355 881
131 iso_pu_bacteria 8056447290 8056448441 881
132 3300005719 Ga0068861_100032707 Ga0068861_1000327072 882
133 3300053104 Ga0500556_0000168 Ga0500556_0000168_1326_4172 882
134 3300053117 Ga0500593_000670 Ga0500593_000670_8930_11776 882
135 iso_pu_bacteria 2582581312 2585302150 882
136 iso_pu_bacteria 2643221548 2643765520 882
137 iso_pu_bacteria 2643221682 2644462408 882
138 iso_pu_bacteria 2818991463 2819693279 882
139 iso_pu_bacteria 2875391855 2875394182 882
140 iso_pu_bacteria 3006393351 3006393516 882
141 iso_pu_bacteria 8056667051 8056672703 882
142 iso_pu_bacteria 8056829672 8056830456 882
143 3300049589 Ga0501073_0000048 Ga0501073_0000048_73748_76603 883
144 iso_pu_bacteria 2728369276 2729908481 883
145 iso_pu_bacteria 2808606982 2811848632 883
146 iso_pu_bacteria 2966598605 2966602895 883
147 iso_pu_bacteria 3006493962 3006499080 883
148 iso_pu_bacteria 2582581314 2585315639 884
149 iso_pu_bacteria 2643221601 2644017030 884
150 iso_pu_bacteria 2643221631 2644178833 884
151 iso_pu_bacteria 2808606700 2810364214 884
152 iso_pu_bacteria 2912757875 2912760311 884
153 iso_pu_bacteria 2946003308 2946005348 884
154 iso_pu_bacteria 2954002825 2954004756 884
155 iso_pu_bacteria 8008485437 8008487437 884
156 iso_pu_bacteria 8025524527 8025526413 884
157 3300044765 Ga0466970_0009318 Ga0466970_0009318_1514_4291 885
158 3300053083 Ga0495655_0001801 Ga0495655_0001801_87_2813 885
159 iso_pu_bacteria 2616644814 2616697373 885
160 iso_pu_bacteria 2643221578 2643898313 885
161 iso_pu_bacteria 2643221673 2644409458 885
162 iso_pu_bacteria 2946045630 2946050416 885
163 iso_pu_bacteria 3006321560 3006321570 885
164 3300006038 Ga0075365_10008027 Ga0075365_100080273 886
165 3300006048 Ga0075363_100016944 Ga0075363_1000169441 886
166 3300006178 Ga0075367_10001429 Ga0075367_100014293 886
167 3300009551 Ga0105238_10003348 Ga0105238_100033487 886
168 3300044901 Ga0466960_0013867 Ga0466960_0013867_43_2847 886
169 3300045049 Ga0466959_0004019 Ga0466959_0004019_6775_9582 886
170 3300050492 nmdc:mga0yw44_5947_c1 nmdc:mga0yw44_5947_c1_489_3299 886
171 3300005985 Ga0081539_10021092 Ga0081539_100210922 887
172 iso_pu_bacteria 2867475112 2867477360 887
173 iso_pu_bacteria 2997451912 2997456063 887
174 iso_pu_bacteria 3001889506 3001892006 887
175 3300044842 Ga0466957_0026314 Ga0466957_0026314_415_3219 888
176 3300048922 Ga0496119_0006102 Ga0496119_0006102_3555_6407 888
177 iso_pu_bacteria 8054160619 8054160976 888
178 3300009545 Ga0105237_10000738 Ga0105237_1000073845 889
179 3300025728 Ga0207655_1005052 Ga0207655_10050522 889
180 3300048920 Ga0496117_0011562 Ga0496117_0011562_1543_4323 889
181 3300048921 Ga0496118_0000640 Ga0496118_0000640_13595_16375 889
182 3300048922 Ga0496119_0008109 Ga0496119_0008109_3158_5938 889
183 3300048926 Ga0496123_0009800 Ga0496123_0009800_5273_8053 889
184 3300048927 Ga0496124_0000070 Ga0496124_0000070_21724_24504 889
185 iso_pu_bacteria 2920879853 2920882261 889
186 iso_pu_bacteria 2997600082 2997601587 889
187 iso_pu_bacteria 8048127548 8048136953 889
188 3300025230 Ga0209563_100241 Ga0209563_1002419 890
189 iso_pu_bacteria 2867369537 2867371568 890
190 3300048929 Ga0496126_0005931 Ga0496126_0005931_95_3169 892
191 iso_pu_bacteria 2953998280 2953999628 892
192 3300031731 Ga0307405_10013821 Ga0307405_100138213 893
193 3300048908 Ga0496105_0039554 Ga0496105_0039554_467_3277 893
194 3300048918 Ga0496115_0002074 Ga0496115_0002074_3055_5865 893
195 iso_pu_bacteria 2537561592 2537898113 893
196 3300049589 Ga0501073_0005223 Ga0501073_0005223_3680_6535 894
197 3300049742 Ga0501080_0000038 Ga0501080_0000038_64052_66907 894
198 iso_pu_bacteria 8004021418 8004023449 894
199 iso_pu_bacteria 8004025490 8004026468 894
200 3300025924 Ga0207694_10000022 Ga0207694_10000022255 895
201 3300031901 Ga0307406_10000712 Ga0307406_1000071218 895
202 3300053139 Ga0500568_0000044 Ga0500568_0000044_15080_17929 895
203 iso_pu_bacteria 2884994152 2884996078 895
204 3300005834 Ga0068851_10000001 Ga0068851_10000001302 896
205 3300025321 Ga0207656_10000002 Ga0207656_10000002626 896
206 3300025914 Ga0207671_10000002 Ga0207671_10000002920 896
207 3300026142 Ga0207698_10000063 Ga0207698_100000639 896
208 iso_pu_bacteria 2643221690 2644503237 896
209 iso_pu_bacteria 2811994880 2812364712 896
210 iso_pu_bacteria 2887443736 2887445814 896
211 3300032002 Ga0307416_100005999 Ga0307416_1000059996 897
212 3300048925 Ga0496122_0000534 Ga0496122_0000534_9249_12071 897
213 iso_pu_bacteria 2643221694 2644525552 899
214 iso_pu_bacteria 2643221722 2644669630 899
215 3300053153 Ga0500616_0001065 Ga0500616_0001065_18489_21335 900
216 iso_pu_bacteria 2995726249 2995726837 900
217 3300005616 Ga0068852_100000700 Ga0068852_10000070015 902
218 3300026142 Ga0207698_10000323 Ga0207698_1000032329 902
219 iso_pu_bacteria 2816332305 2817508773 902
220 3300046457 Ga0495590_0000336 Ga0495590_0000336_4145_7021 903
221 3300048920 Ga0496117_0014794 Ga0496117_0014794_1775_4576 903
222 iso_pu_bacteria 8002811521 8002812906 904
223 3300048921 Ga0496118_0014550 Ga0496118_0014550_1119_3905 905
224 3300048922 Ga0496119_0024042 Ga0496119_0024042_1445_4231 905
225 3300048925 Ga0496122_0000020 Ga0496122_0000020_383325_386111 905
226 3300048926 Ga0496123_0000003 Ga0496123_0000003_598449_601235 905
227 3300048927 Ga0496124_0006489 Ga0496124_0006489_2762_5548 905
228 3300048928 Ga0496125_0001049 Ga0496125_0001049_31748_34534 905
229 3300053140 Ga0500573_0010087 Ga0500573_0010087_1611_4460 905
230 iso_pu_bacteria 8055037949 8055040572 905
231 3300053140 Ga0500573_0000001 Ga0500573_0000001_142105_144885 906
232 3300003760 Ga0055527_1000005 Ga0055527_1000005407 907
233 3300003762 Ga0055542_1000006 Ga0055542_1000006407 907
234 3300003763 Ga0055529_1000013 Ga0055529_1000013316 907
235 3300025228 Ga0209672_100003 Ga0209672_100003750 907
236 3300025229 Ga0209147_100465 Ga0209147_1004659 907
237 3300025254 Ga0209148_1000004 Ga0209148_10000041045 907
238 3300025272 Ga0209455_1000046 Ga0209455_100004664 907
239 3300048922 Ga0496119_0002830 Ga0496119_0002830_388_3222 907
240 3300049574 Ga0501038_0054457 Ga0501038_0054457_614_3352 907
241 iso_pu_bacteria 2848551377 2848552934 907
242 iso_pu_bacteria 2893684298 2893686546 907
243 3300048917 Ga0496114_0039165 Ga0496114_0039165_575_3493 909
244 3300020081 Ga0206354_10250894 Ga0206354_102508942 910
245 3300020082 Ga0206353_10548987 Ga0206353_105489874 910
246 3300048914 Ga0496111_0023212 Ga0496111_0023212_696_3491 910
247 3300048916 Ga0496113_0033606 Ga0496113_0033606_75_2870 910
248 iso_pu_bacteria 2643221613 2644083594 910
249 iso_pu_bacteria 2643221721 2644664211 910
250 iso_pu_bacteria 2932431166 2932433208 910
251 iso_pu_bacteria 2935890801 2935891592 910
252 3300005327 Ga0070658_10006072 Ga0070658_100060723 911
253 3300013105 Ga0157369_10010472 Ga0157369_100104728 911
254 iso_pu_bacteria 2857727296 2857727657 911
255 3300044765 Ga0466970_0000056 Ga0466970_0000056_33460_36270 912
256 iso_pu_bacteria 8055034563 8055037040 912
257 3300053080 Ga0500635_0000004 Ga0500635_0000004_171365_174172 913
258 3300053136 Ga0500559_0004611 Ga0500559_0004611_2769_5561 913
259 iso_pu_bacteria 2739367653 2739602728 913
260 iso_pu_bacteria 2808606368 2808885025 913
261 3300049586 Ga0501070_0000044 Ga0501070_0000044_956_3760 914
262 3300003752 Ga0055539_1000027 Ga0055539_1000027140 915
263 3300003756 Ga0055533_1000020 Ga0055533_1000020140 915
264 3300003759 Ga0055525_1000151 Ga0055525_10001518 915
265 3300003841 Ga0055541_1000849 Ga0055541_10008491 915
266 3300025225 Ga0209566_100043 Ga0209566_10004351 915
267 3300025226 Ga0209674_100001 Ga0209674_1000013759 915
268 3300025230 Ga0209563_100001 Ga0209563_1000013759 915
269 3300025253 Ga0209677_100001 Ga0209677_1000013759 915
270 iso_pu_bacteria 2773857759 2774383645 915
271 iso_pu_bacteria 2977251589 2977251844 915
272 3300005366 Ga0070659_100014681 Ga0070659_1000146813 916
273 iso_pu_bacteria 2946033335 2946034277 916
274 3300048906 Ga0496103_0004003 Ga0496103_0004003_6135_8930 917
275 3300013105 Ga0157369_10000103 Ga0157369_1000010399 918
276 iso_pu_bacteria 2585428157 2588106744 918
277 iso_pu_bacteria 2984580707 2984582062 918
278 3300048928 Ga0496125_0000120 Ga0496125_0000120_22316_25099 919
279 3300049572 Ga0501036_0021744 Ga0501036_0021744_954_3770 919
280 iso_pu_bacteria 2643221575 2643888517 919
281 iso_pu_bacteria 2751185788 2753302544 919
282 iso_pu_bacteria 2904430863 2904434023 919
283 iso_pu_bacteria 2904501621 2904503836 919
284 iso_pu_bacteria 2908674828 2908676802 919
285 iso_pu_bacteria 2909074476 2909077005 919
286 iso_pu_bacteria 2919039151 2919039617 919
287 iso_pu_bacteria 2919042368 2919043014 919
288 iso_pu_bacteria 2928104781 2928105869 919
289 iso_pu_bacteria 2928500415 2928503342 919
290 iso_pu_bacteria 2984551494 2984554699 919
291 3300049571 Ga0501034_0015998 Ga0501034_0015998_4527_7337 920
292 3300049580 Ga0501046_0022600 Ga0501046_0022600_149_2959 920
293 3300049581 Ga0501047_0020789 Ga0501047_0020789_1453_4263 920
294 iso_pu_bacteria 2852632344 2852633044 920
295 iso_pu_bacteria 2821268502 2821269349 921
296 iso_pu_bacteria 2852643534 2852646240 922
297 3300013102 Ga0157371_10001174 Ga0157371_1000117424 923
298 iso_pu_bacteria 2643221649 2644277555 923
299 iso_pu_bacteria 2939660829 2939663110 923
300 iso_pu_bacteria 2966921586 2966921839 923
301 iso_pu_bacteria 2585428094 2587864823 924
302 iso_pu_bacteria 2808606447 2809226825 924
303 iso_pu_bacteria 2857737099 2857740041 925
304 iso_pu_bacteria 2928121344 2928124867 925
305 iso_pu_bacteria 2870628048 2870629723 926
306 iso_pu_bacteria 2643221632 2644180924 927
307 iso_pu_bacteria 2857729791 2857732241 927
308 iso_pu_bacteria 2870622029 2870624578 928
309 iso_pu_bacteria 2928153084 2928154985 928
310 iso_pu_bacteria 2939657138 2939660145 928
311 3300005327 Ga0070658_10000330 Ga0070658_1000033015 929
312 3300025909 Ga0207705_10000001 Ga0207705_100000011603 929
313 iso_pu_bacteria 2844841374 2844841557 929
314 iso_pu_bacteria 2966924647 2966926367 929
315 iso_pu_bacteria 2919523602 2919527267 930
316 iso_pu_bacteria 8056037122 8056037212 930
317 iso_pu_bacteria 2643221616 2644095079 931
318 iso_pu_bacteria 2844852863 2844856387 931
319 iso_pu_bacteria 2919055335 2919057207 931
320 3300053136 Ga0500559_0001220 Ga0500559_0001220_71_2905 933
321 3300053136 Ga0500559_0006405 Ga0500559_0006405_1468_4302 933
322 3300002772 JGI25164J39214_1000655 JGI25164J39214_10006554 935
323 3300003214 JGI25165J46597_1000044 JGI25165J46597_1000044128 935
324 3300025231 Ga0207427_100077 Ga0207427_10007799 935
325 3300025233 Ga0209437_100490 Ga0209437_1004903 935
326 3300025261 Ga0209233_1000014 Ga0209233_1000014127 935

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01043

SecA_PP_bind

SecA preprotein cross-linking domain

225

334

0.99

PF07517

SecA_DEAD

SecA DEAD-like domain

1

378

0.99

PF21090

P-loop_SecA

SecA P-loop domain

393

606

0.98

PF07516

SecA_SW

SecA Wing and Scaffold domain

608

823

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.9367 11 590
3bxz-assembly1.cif.gz_A crystal structure of the isolated dead motor domains from escherichia coli seca 0.9305 11 590
1tf2-assembly1.cif.gz_A crystal structure of seca:adp in an open conformation from bacillus subtilis 0.928 19 829
1tf5-assembly1.cif.gz_A crystal structure of seca in an open conformation from bacillus subtilis 0.9185 19 829
1tf2-assembly1.cif.gz_A crystal structure of seca:adp in an open conformation from bacillus subtilis 0.912 19 829
ID Description Score Start End Superfamily
af_P9WGP5_617_837_1.10.3060.10 Mainly Alpha;Orthogonal Bundle;Helical scaffold and wing domains of SecA;Helical scaffold and wing domains of SecA 0.9622 618 831 1.10.3060.10
af_A0A1D6MS70_87_296_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9616 22 226 3.40.50.300
2ibmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.944 13 398 3.40.50.300
1tf5A02 Alpha Beta;Alpha-Beta Complex;Pre-protein croslinking domain of SecA;SecA, preprotein cross-linking domain 0.9437 227 350 3.90.1440.10
2ibmB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9371 13 398 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A453HJD4-F1-model_v4 chloroplast protein-transporting ATPase (EC 7.4.2.4) 0.9852 17 178 GO:0005524
GO:0006605
GO:0006886
GO:0009941
GO:0016020
GO:0016464
GO:0017038
AF-A0A350PH04-F1-model_v4 Preprotein translocase subunit SecA 0.9851 378 490 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
GO:0031522
GO:0043952
AF-A0A354U311-F1-model_v4 deleted 0.9815 387 492
AF-A0A6A7GBI7-F1-model_v4 Preprotein translocase subunit SecA 0.9793 407 593 GO:0005524
GO:0005829
GO:0005886
GO:0006605
GO:0006886
AF-A0A6B1PE52-F1-model_v4 deleted 0.9776 4 150

Feature Viewer

pLDDT pTM Quality
76.83 0.69 Medium
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Predicted Structure (AlphaFold2)

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