F408030

General Info

Members Datasets Scaffolds Average Seq Length
325 214 235 426

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0056718|Ga0501032_0056718_307_1665
Length 452
Sequence MIQTIDLRGSRPSRAEYRDLVPRAEVDVSVAVRAAAELIDEVTSGGRAALEAQALRFDGVTPPHLRVPLNEIRDAADALPPEIRTALSESIARVRAATAAQIPPDRITEIEPGARIVQRWQPVERAGLYVPGGKAVYPSSVVMNVVPAQVAGVASIALASPPQKEFGGRVHPLILGAAGLLGVDEVYAMGGAGAIGALAFGVSEIGLDPVQVITGPGNVYVAAAKRVVRGQAGIDSEAGPTEILVIADATADPEYVAADLVSQAEHDESAASVLVTDDPEFAGRVRLALERRAAATRHAERVAAALGGVQSAIVLVDDLDAAASFSNAYGPEHLELQTADPDELLGLITNAGAIFLGQDSPVSLGDYLAGSNHVLPTGGQAKFASALGAYSFLRPQQIVRYDRVALSGVHERILTLSSAEDLPAHGEAVSARFASSPIAEGGDRGGDPVQVG

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
3 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
4 2643221546 Microbacterium sp. Root53 Isolate Unclassified
5 2643221549 Agromyces sp. Root1464 Isolate Unclassified
6 2643221553 Microbacterium sp. Root553 Isolate Unclassified
7 2643221566 Microbacterium sp. Root166 Isolate Unclassified
8 2643221572 Leifsonia sp. Root60 Isolate Unclassified
9 2643221575 Microbacterium sp. Root61 Isolate Unclassified
10 2643221597 Microbacterium sp. Root180 Isolate Unclassified
11 2643221616 Leifsonia sp. Root227 Isolate Unclassified
12 2643221619 Agromyces sp. Root81 Isolate Unclassified
13 2643221630 Microbacterium sp. Root322 Isolate Unclassified
14 2643221632 Leifsonia sp. Root112D2 Isolate Unclassified
15 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
16 2643221649 Leifsonia sp. Root4 Isolate Unclassified
17 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
18 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
19 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
20 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
21 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
22 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
23 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
24 2773857759 Microbacterium sp. 1294 Isolate Unclassified
25 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
26 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
27 2808606368 Microbacterium sp. SLBN-1 Isolate Unclassified
28 2808606372 Agromyces sp. 23-23 Isolate Unclassified
29 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
30 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
31 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
32 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
33 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
34 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
35 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
36 2852643534 Leifsonia sp. AK011 Isolate Rhizosphere
37 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
38 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
39 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
40 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
41 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
42 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
43 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
44 2857737099 Lysinimonas sp. R-73066 Isolate Unclassified
45 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
46 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
47 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
48 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
49 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
50 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
51 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
52 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
53 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
54 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
55 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
56 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
57 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
58 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
59 2919042368 Curtobacterium sp. 320 Isolate Rhizosphere
60 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
61 2919069694 Microbacterium sp. 1154 Isolate Unclassified
62 2919395869 Microbacterium resistens 2980 Isolate Unclassified
63 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
64 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
65 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
66 2928104781 Curtobacterium sp. 1544 Isolate Rhizosphere
67 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
68 2928153084 Leifsonia sp. 563 Isolate Unclassified
69 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
70 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
71 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
72 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
73 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
74 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
75 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
76 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
77 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
78 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
79 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
80 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
81 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
82 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
83 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
84 2984551494 Curtobacterium sp. SORGH_AS776 Isolate Aerial Root
85 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
86 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
87 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
88 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
89 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
90 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
91 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
92 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
93 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
94 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
95 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
96 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
97 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
98 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
99 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
100 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
101 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
102 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
103 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
104 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
105 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
106 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
107 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
108 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
109 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
110 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
111 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
112 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
113 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
114 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
115 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
116 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
117 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
118 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
123 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
124 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
125 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
126 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
127 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
128 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
129 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
148 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
149 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
150 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
151 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
152 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
153 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
154 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
155 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
156 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
157 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
158 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
159 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
160 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
164 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
165 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
166 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
167 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
168 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
169 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
170 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
171 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
172 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
173 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
174 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
177 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
178 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
179 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
180 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
181 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
185 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
186 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
187 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
188 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
192 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
193 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
194 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
195 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
196 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
197 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
198 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
199 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
200 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
202 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
203 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
204 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
205 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
206 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
207 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
208 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
209 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
210 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
211 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
212 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
213 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
214 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.77
Metatranscriptomes 1.54
Isolates 27.69

Biome Distribution

Category Percentage (%)
Aerial Root 0.92
Bulb 0
Endosphere 12.31
Nodule 0
Rhizoplane 4.92
Rhizosphere 47.08
Stem 0
Stem Tuber 0.31
Unclassified 34.46

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10019477 3300001979 Bacteria 2389
2 JGI24735J21928_10000431 3300002067 Bacteria 14659
3 JGI25162J39368_1005821 3300002737 Bacteria 2291
4 JGI25154J39366_1001125 3300002738 Bacteria 10388
5 JGI25164J39214_1000402 3300002772 Bacteria 24889
6 JGI25165J46597_1000004 3300003214 Bacteria 667510
7 Ga0006562J51391_1014808 3300003578 Bacteria 10498
8 Ga0006562J51391_1014811 3300003578 Bacteria 7630
9 Ga0006562J51391_1103690 3300003578 Bacteria 5064
10 Ga0006562J51391_1103691 3300003578 Bacteria 4850
11 Ga0055533_1000001 3300003756 Bacteria 1863437
12 Ga0055525_1000787 3300003759 Bacteria 10179
13 Ga0055527_1000001 3300003760 Bacteria 850044
14 Ga0055529_1000019 3300003763 Bacteria 332786
15 Ga0055541_1006497 3300003841 Bacteria 1977
16 Ga0065714_10071023 3300005288 Bacteria 3697
17 Ga0070659_100000366 3300005366 Bacteria 34220
18 Ga0068853_100013609 3300005539 Bacteria 6648
19 Ga0068855_100012277 3300005563 Bacteria 10351
20 Ga0068855_100127183 3300005563 Bacteria 2912
21 Ga0068857_100002984 3300005577 Bacteria 13950
22 Ga0068857_100051296 3300005577 Bacteria 3660
23 Ga0068852_100004834 3300005616 Bacteria 9572
24 Ga0068852_100082332 3300005616 Bacteria 2860
25 Ga0068851_10000020 3300005834 Bacteria 133551
26 Ga0068858_100000233 3300005842 Bacteria 60097
27 Ga0075369_10064901 3300006186 Bacteria 1599
28 Ga0105244_10049043 3300009036 Bacteria 2159
29 Ga0105244_10087055 3300009036 Bacteria 1540
30 Ga0105240_10002356 3300009093 Bacteria 30453
31 Ga0105245_10153650 3300009098 Bacteria 2178
32 Ga0105243_10033572 3300009148 Bacteria 3969
33 Ga0105241_10000260 3300009174 Bacteria 39516
34 Ga0105238_10002073 3300009551 Bacteria 20252
35 Ga0105239_10245650 3300010375 Bacteria 2010
36 Ga0105239_10328463 3300010375 Bacteria 1725
37 Ga0157371_10001714 3300013102 Bacteria 22297
38 Ga0157369_10034622 3300013105 Bacteria 5540
39 Ga0157369_10056591 3300013105 Bacteria 4231
40 Ga0171462_1003 3300013250 Bacteria 853796
41 Ga0206353_12013365 3300020082 Bacteria 2473
42 Ga0209566_100240 3300025225 Bacteria 52739
43 Ga0209674_100001 3300025226 Bacteria 4013750
44 Ga0209672_100006 3300025228 Bacteria 1004497
45 Ga0209563_100001 3300025230 Bacteria 4013775
46 Ga0207427_100010 3300025231 Bacteria 648610
47 Ga0209437_100216 3300025233 Bacteria 106353
48 Ga0209646_1000071 3300025246 Bacteria 228702
49 Ga0209677_100001 3300025253 Bacteria 4013787
50 Ga0209677_102171 3300025253 Bacteria 7653
51 Ga0209148_1000015 3300025254 Bacteria 850103
52 Ga0209148_1001437 3300025254 Bacteria 12129
53 Ga0209233_1000001 3300025261 Bacteria 2992747
54 Ga0209455_1000013 3300025272 Bacteria 850103
55 Ga0207656_10000003 3300025321 Bacteria 771644
56 Ga0207655_1011660 3300025728 Bacteria 5209
57 Ga0207647_10006593 3300025904 Bacteria 8436
58 Ga0207647_10086378 3300025904 Bacteria 1875
59 Ga0207705_10015097 3300025909 Bacteria 5553
60 Ga0207654_10000003 3300025911 Bacteria 1030378
61 Ga0207695_10068991 3300025913 Bacteria 3620
62 Ga0207695_10092815 3300025913 Bacteria 3029
63 Ga0207671_10000002 3300025914 Bacteria 1144816
64 Ga0207657_10016456 3300025919 Bacteria 7133
65 Ga0207694_10000073 3300025924 Bacteria 118507
66 Ga0207709_10015541 3300025935 Bacteria 4220
67 Ga0207711_10015358 3300025941 Bacteria 6354
68 Ga0207667_10011531 3300025949 Bacteria 10270
69 Ga0207667_10075808 3300025949 Bacteria 3491
70 Ga0207667_10092697 3300025949 Bacteria 3120
71 Ga0207658_10068653 3300025986 Bacteria 2675
72 Ga0207703_10000044 3300026035 Bacteria 158471
73 Ga0207639_10071319 3300026041 Bacteria 2717
74 Ga0207702_10040177 3300026078 Bacteria 3922
75 Ga0207674_10004904 3300026116 Bacteria 16013
76 Ga0207674_10046423 3300026116 Bacteria 4460
77 Ga0207698_10001186 3300026142 Bacteria 15193
78 Ga0207698_10012929 3300026142 Bacteria 5487
79 Ga0207698_10120313 3300026142 Bacteria 2221
80 Ga0307513_10309140 3300031456 Bacteria 1344
81 Ga0307514_10009171 3300031649 Bacteria 8348
82 Ga0307406_10000034 3300031901 Bacteria 83739
83 Ga0307406_10015991 3300031901 Bacteria 4352
84 Ga0307409_100130177 3300031995 Bacteria 2149
85 Ga0307409_100213674 3300031995 Bacteria 1736
86 Ga0307414_10004129 3300032004 Bacteria 7843
87 Ga0395900_0001424 3300037418 Bacteria 28552
88 Ga0395898_0000015 3300037466 Bacteria 439819
89 Ga0395898_0422562 3300037466 Bacteria 1270
90 Ga0439465_0026706 3300041413 Bacteria 1827
91 Ga0451793_1057580 3300041452 Bacteria 2837
92 Ga0451793_1762599 3300041452 Bacteria 6366
93 Ga0466972_0026017 3300044658 Bacteria 2898
94 Ga0466972_0073538 3300044658 Bacteria 1629
95 Ga0466965_0000049 3300044683 Bacteria 41316
96 Ga0466965_0006892 3300044683 Bacteria 5197
97 Ga0466970_0000004 3300044765 Bacteria 108620
98 Ga0466970_0002403 3300044765 Bacteria 9045
99 Ga0495627_001014 3300046453 Bacteria 18844
100 Ga0495672_0005303 3300047320 Bacteria 10263
101 Ga0495672_0060560 3300047320 Bacteria 2186
102 Ga0496101_0019611 3300048904 Bacteria 4619
103 Ga0496102_0080078 3300048905 Bacteria 3009
104 Ga0496104_0031305 3300048907 Bacteria 4946
105 Ga0496104_0126955 3300048907 Bacteria 2449
106 Ga0496105_0082775 3300048908 Bacteria 2650
107 Ga0496105_0117615 3300048908 Bacteria 2192
108 Ga0496109_0083195 3300048912 Bacteria 2951
109 Ga0496110_0103549 3300048913 Bacteria 2553
110 Ga0496110_0114774 3300048913 Bacteria 2424
111 Ga0496111_0049298 3300048914 Bacteria 3036
112 Ga0496113_0013237 3300048916 Bacteria 5580
113 Ga0496114_0023217 3300048917 Bacteria 5060
114 Ga0496114_0044232 3300048917 Bacteria 3694
115 Ga0496114_0084448 3300048917 Bacteria 2688
116 Ga0496116_0111567 3300048919 Bacteria 1606
117 Ga0496117_0000232 3300048920 Bacteria 105479
118 Ga0496117_0004850 3300048920 Bacteria 14534
119 Ga0496117_0005009 3300048920 Bacteria 14209
120 Ga0496117_0007946 3300048920 Bacteria 10191
121 Ga0496117_0010702 3300048920 Bacteria 8299
122 Ga0496118_0003838 3300048921 Bacteria 18487
123 Ga0496118_0004605 3300048921 Bacteria 16205
124 Ga0496118_0008605 3300048921 Bacteria 10505
125 Ga0496118_0009135 3300048921 Bacteria 10084
126 Ga0496118_0015993 3300048921 Bacteria 6908
127 Ga0496118_0025194 3300048921 Bacteria 5110
128 Ga0496118_0046630 3300048921 Bacteria 3369
129 Ga0496118_0050988 3300048921 Bacteria 3170
130 Ga0496119_0000341 3300048922 Bacteria 65282
131 Ga0496119_0002098 3300048922 Bacteria 22484
132 Ga0496119_0007372 3300048922 Bacteria 9930
133 Ga0496119_0012064 3300048922 Bacteria 7063
134 Ga0496119_0014073 3300048922 Bacteria 6297
135 Ga0496119_0090198 3300048922 Bacteria 1744
136 Ga0496120_0001794 3300048923 Bacteria 24093
137 Ga0496120_0001809 3300048923 Bacteria 23936
138 Ga0496120_0033626 3300048923 Bacteria 3079
139 Ga0496121_0000040 3300048924 Bacteria 348494
140 Ga0496122_0000030 3300048925 Bacteria 331586
141 Ga0496122_0000120 3300048925 Bacteria 182539
142 Ga0496122_0002503 3300048925 Bacteria 25953
143 Ga0496122_0009370 3300048925 Bacteria 10337
144 Ga0496122_0015273 3300048925 Bacteria 7347
145 Ga0496122_0030762 3300048925 Bacteria 4488
146 Ga0496123_0000024 3300048926 Bacteria 331587
147 Ga0496123_0000051 3300048926 Bacteria 237095
148 Ga0496123_0001799 3300048926 Bacteria 28218
149 Ga0496123_0002701 3300048926 Bacteria 21334
150 Ga0496123_0012564 3300048926 Bacteria 7208
151 Ga0496124_0000439 3300048927 Bacteria 73567
152 Ga0496124_0008086 3300048927 Bacteria 11056
153 Ga0496124_0009102 3300048927 Bacteria 10266
154 Ga0496124_0014332 3300048927 Bacteria 7668
155 Ga0496124_0018915 3300048927 Bacteria 6431
156 Ga0496124_0022333 3300048927 Bacteria 5802
157 Ga0496124_0072562 3300048927 Bacteria 2850
158 Ga0496124_0088642 3300048927 Bacteria 2528
159 Ga0496124_0112783 3300048927 Bacteria 2186
160 Ga0496125_0000097 3300048928 Bacteria 204607
161 Ga0496125_0001405 3300048928 Bacteria 35141
162 Ga0496125_0010773 3300048928 Bacteria 9208
163 Ga0496125_0011839 3300048928 Bacteria 8690
164 Ga0496125_0057813 3300048928 Bacteria 3137
165 Ga0496126_0001194 3300048929 Bacteria 42334
166 Ga0496126_0002527 3300048929 Bacteria 24495
167 Ga0496126_0005417 3300048929 Bacteria 14558
168 Ga0496126_0011052 3300048929 Bacteria 9382
169 Ga0496126_0018282 3300048929 Bacteria 6953
170 Ga0496126_0082025 3300048929 Bacteria 2850
171 Ga0496126_0091762 3300048929 Bacteria 2670
172 Ga0501032_0024545 3300049569 Bacteria 4161
173 Ga0501032_0033951 3300049569 Bacteria 3494
174 Ga0501032_0056718 3300049569 Bacteria 2632
175 Ga0501033_0021306 3300049570 Bacteria 4889
176 Ga0501033_0052880 3300049570 Bacteria 3009
177 Ga0501034_0000227 3300049571 Bacteria 106244
178 Ga0501034_0005786 3300049571 Bacteria 13445
179 Ga0501034_0006125 3300049571 Bacteria 12977
180 Ga0501034_0019134 3300049571 Bacteria 7012
181 Ga0501034_0073129 3300049571 Bacteria 3437
182 Ga0501034_0118667 3300049571 Bacteria 2632
183 Ga0501034_0272202 3300049571 Bacteria 1634
184 Ga0501034_0293460 3300049571 Bacteria 1563
185 Ga0501036_0160786 3300049572 Bacteria 1893
186 Ga0501037_0000671 3300049573 Bacteria 26204
187 Ga0501037_0021132 3300049573 Bacteria 4809
188 Ga0501037_0023861 3300049573 Bacteria 4524
189 Ga0501037_0095613 3300049573 Bacteria 2147
190 Ga0501038_0032606 3300049574 Bacteria 4595
191 Ga0501038_0068046 3300049574 Bacteria 3028
192 Ga0501039_0047498 3300049575 Bacteria 3318
193 Ga0501043_0002454 3300049579 Bacteria 15682
194 Ga0501043_0039602 3300049579 Bacteria 3704
195 Ga0501043_0065644 3300049579 Bacteria 2850
196 Ga0501043_0077652 3300049579 Bacteria 2608
197 Ga0501043_0088202 3300049579 Bacteria 2438
198 Ga0501046_0002489 3300049580 Bacteria 17261
199 Ga0501046_0002630 3300049580 Bacteria 16774
200 Ga0501047_0000983 3300049581 Bacteria 28745
201 Ga0501047_0018681 3300049581 Bacteria 6648
202 Ga0501047_0279360 3300049581 Bacteria 1515
203 Ga0501048_0017335 3300049582 Bacteria 5307
204 Ga0501067_0046452 3300049583 Bacteria 2410
205 Ga0501068_0026892 3300049584 Bacteria 3394
206 Ga0501070_0000167 3300049586 Bacteria 60680
207 Ga0501070_0003401 3300049586 Bacteria 13809
208 Ga0501071_0001502 3300049587 Bacteria 13562
209 Ga0501073_0028496 3300049589 Bacteria 3991
210 Ga0501076_0126158 3300049592 Bacteria 2074
211 Ga0501080_0000084 3300049742 Bacteria 62784
212 Ga0501083_0019605 3300049744 Bacteria 4711
213 Ga0501035_0020532 3300049822 Bacteria 6067
214 Ga0501035_0037684 3300049822 Bacteria 4376
215 Ga0501044_0004023 3300049823 Bacteria 16480
216 Ga0501044_0043533 3300049823 Bacteria 4663
217 nmdc:mga0yw44_16262_c1 3300050492 Bacteria 4015
218 nmdc:mga0sz30_38991_c1 3300050516 Bacteria 1992
219 Ga0500635_0000028 3300053080 Bacteria 104398
220 Ga0500556_0000001 3300053104 Bacteria 1135060
221 Ga0500559_0000102 3300053136 Bacteria 66427
222 Ga0500559_0007192 3300053136 Bacteria 4955
223 Ga0500559_0020842 3300053136 Bacteria 2774
224 Ga0500559_0095452 3300053136 Bacteria 1365
225 Ga0500568_0000014 3300053139 Bacteria 223550
226 Ga0500568_0000016 3300053139 Bacteria 217194
227 Ga0500568_0004426 3300053139 Bacteria 7508
228 Ga0500568_0007254 3300053139 Bacteria 5460
229 Ga0500573_0000059 3300053140 Bacteria 71066
230 Ga0500573_0004636 3300053140 Bacteria 7271
231 Ga0500573_0008523 3300053140 Bacteria 5650
232 Ga0500573_0072836 3300053140 Bacteria 1958
233 Ga0500573_0101899 3300053140 Bacteria 1615
234 Ga0500616_0000088 3300053153 Bacteria 191662
235 Ga0500616_0003545 3300053153 Bacteria 11827

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025941 Ga0207711_10015358 Ga0207711_100153587 342
2 3300048921 Ga0496118_0008605 Ga0496118_0008605_3837_5093 351
3 3300048928 Ga0496125_0057813 Ga0496125_0057813_615_1874 355
4 3300053139 Ga0500568_0000014 Ga0500568_0000014_186523_187830 358
5 3300053153 Ga0500616_0003545 Ga0500616_0003545_22_1155 362
6 3300048929 Ga0496126_0082025 Ga0496126_0082025_1364_2668 363
7 3300037466 Ga0395898_0422562 Ga0395898_0422562_112_1257 364
8 3300009098 Ga0105245_10153650 Ga0105245_101536502 374
9 3300048920 Ga0496117_0007946 Ga0496117_0007946_8699_10000 375
10 3300048920 Ga0496117_0010702 Ga0496117_0010702_3648_4958 376
11 3300049569 Ga0501032_0024545 Ga0501032_0024545_976_2280 380
12 3300049573 Ga0501037_0095613 Ga0501037_0095613_689_1993 380
13 3300049579 Ga0501043_0039602 Ga0501043_0039602_1172_2476 380
14 3300049581 Ga0501047_0000983 Ga0501047_0000983_4840_6144 380
15 3300049823 Ga0501044_0004023 Ga0501044_0004023_719_2023 380
16 3300048925 Ga0496122_0002503 Ga0496122_0002503_10961_12277 381
17 3300048926 Ga0496123_0002701 Ga0496123_0002701_17813_19129 381
18 3300005616 Ga0068852_100082332 Ga0068852_1000823322 382
19 3300005834 Ga0068851_10000020 Ga0068851_1000002084 382
20 3300025321 Ga0207656_10000003 Ga0207656_100000037 382
21 3300025914 Ga0207671_10000002 Ga0207671_10000002103 382
22 3300026142 Ga0207698_10012929 Ga0207698_100129296 382
23 3300048922 Ga0496119_0007372 Ga0496119_0007372_3321_4634 382
24 3300049574 Ga0501038_0032606 Ga0501038_0032606_1936_3204 382
25 3300049571 Ga0501034_0005786 Ga0501034_0005786_4299_5567 386
26 3300003578 Ga0006562J51391_1103690 Ga0006562J51391_11036903 388
27 3300003578 Ga0006562J51391_1103691 Ga0006562J51391_11036914 388
28 3300048929 Ga0496126_0091762 Ga0496126_0091762_63_1361 388
29 3300048929 Ga0496126_0002527 Ga0496126_0002527_19078_20382 389
30 3300049592 Ga0501076_0126158 Ga0501076_0126158_307_1614 390
31 3300013250 Ga0171462_1003 Ga0171462_1003695 391
32 3300005577 Ga0068857_100002984 Ga0068857_1000029843 392
33 3300026116 Ga0207674_10004904 Ga0207674_100049043 392
34 3300002067 JGI24735J21928_10000431 JGI24735J21928_1000043110 393
35 3300049586 Ga0501070_0000167 Ga0501070_0000167_45652_46956 393
36 3300053140 Ga0500573_0008523 Ga0500573_0008523_641_1948 393
37 3300005577 Ga0068857_100051296 Ga0068857_1000512963 394
38 3300009093 Ga0105240_10002356 Ga0105240_1000235618 394
39 3300009174 Ga0105241_10000260 Ga0105241_1000026027 394
40 3300025254 Ga0209148_1001437 Ga0209148_10014378 394
41 3300025911 Ga0207654_10000003 Ga0207654_10000003222 394
42 3300025913 Ga0207695_10068991 Ga0207695_100689912 394
43 3300026116 Ga0207674_10046423 Ga0207674_100464233 394
44 3300031456 Ga0307513_10309140 Ga0307513_103091401 394
45 3300044658 Ga0466972_0026017 Ga0466972_0026017_1471_2781 394
46 3300044765 Ga0466970_0002403 Ga0466970_0002403_4925_6235 394
47 3300048914 Ga0496111_0049298 Ga0496111_0049298_1653_2954 394
48 3300031995 Ga0307409_100213674 Ga0307409_1002136742 395
49 3300048925 Ga0496122_0000120 Ga0496122_0000120_13125_14447 396
50 3300048926 Ga0496123_0000051 Ga0496123_0000051_43020_44342 396
51 3300048927 Ga0496124_0008086 Ga0496124_0008086_1202_2524 396
52 3300048929 Ga0496126_0011052 Ga0496126_0011052_6085_7407 396
53 3300002737 JGI25162J39368_1005821 JGI25162J39368_10058211 397
54 3300002772 JGI25164J39214_1000402 JGI25164J39214_10004026 397
55 3300003214 JGI25165J46597_1000004 JGI25165J46597_1000004427 397
56 3300025231 Ga0207427_100010 Ga0207427_100010154 397
57 3300025233 Ga0209437_100216 Ga0209437_10021652 397
58 3300025261 Ga0209233_1000001 Ga0209233_10000011795 397
59 3300044683 Ga0466965_0006892 Ga0466965_0006892_1974_3287 397
60 3300048922 Ga0496119_0002098 Ga0496119_0002098_15464_16786 397
61 3300048923 Ga0496120_0033626 Ga0496120_0033626_206_1528 397
62 3300053136 Ga0500559_0020842 Ga0500559_0020842_1489_2727 397
63 3300009036 Ga0105244_10087055 Ga0105244_100870552 399
64 3300048929 Ga0496126_0005417 Ga0496126_0005417_6430_7734 399
65 3300025904 Ga0207647_10006593 Ga0207647_100065938 400
66 3300026142 Ga0207698_10120313 Ga0207698_101203132 400
67 3300031901 Ga0307406_10015991 Ga0307406_100159912 400
68 3300032004 Ga0307414_10004129 Ga0307414_100041293 400
69 3300048922 Ga0496119_0000341 Ga0496119_0000341_30920_32263 400
70 3300048925 Ga0496122_0030762 Ga0496122_0030762_364_1668 400
71 3300025904 Ga0207647_10086378 Ga0207647_100863782 401
72 3300044765 Ga0466970_0000004 Ga0466970_0000004_74991_76325 401
73 3300005616 Ga0068852_100004834 Ga0068852_1000048344 402
74 3300026142 Ga0207698_10001186 Ga0207698_100011869 402
75 3300048907 Ga0496104_0126955 Ga0496104_0126955_523_1824 402
76 3300048913 Ga0496110_0103549 Ga0496110_0103549_892_2193 402
77 3300048919 Ga0496116_0111567 Ga0496116_0111567_48_1355 402
78 3300005563 Ga0068855_100012277 Ga0068855_1000122776 403
79 3300020082 Ga0206353_12013365 Ga0206353_120133652 403
80 3300025253 Ga0209677_102171 Ga0209677_1021716 403
81 3300025919 Ga0207657_10016456 Ga0207657_100164565 403
82 3300025949 Ga0207667_10011531 Ga0207667_100115316 403
83 3300025949 Ga0207667_10075808 Ga0207667_100758083 403
84 3300002738 JGI25154J39366_1001125 JGI25154J39366_100112512 404
85 3300025246 Ga0209646_1000071 Ga0209646_1000071224 404
86 3300047320 Ga0495672_0005303 Ga0495672_0005303_1103_2416 404
87 3300049587 Ga0501071_0001502 Ga0501071_0001502_370_1695 404
88 iso_pu_bacteria 2852646457 2852648709 404
89 3300048921 Ga0496118_0004605 Ga0496118_0004605_3013_4317 407
90 3300005842 Ga0068858_100000233 Ga0068858_10000023358 408
91 3300026035 Ga0207703_10000044 Ga0207703_1000004416 408
92 3300010375 Ga0105239_10328463 Ga0105239_103284632 409
93 3300049571 Ga0501034_0006125 Ga0501034_0006125_11540_12865 409
94 3300049571 Ga0501034_0073129 Ga0501034_0073129_1065_2384 409
95 3300005539 Ga0068853_100013609 Ga0068853_1000136092 410
96 3300025986 Ga0207658_10068653 Ga0207658_100686533 410
97 3300026041 Ga0207639_10071319 Ga0207639_100713193 410
98 3300026078 Ga0207702_10040177 Ga0207702_100401772 410
99 3300049571 Ga0501034_0293460 Ga0501034_0293460_156_1466 410
100 3300049583 Ga0501067_0046452 Ga0501067_0046452_328_1638 410
101 3300048920 Ga0496117_0004850 Ga0496117_0004850_6583_7905 411
102 3300048921 Ga0496118_0025194 Ga0496118_0025194_464_1786 411
103 3300048921 Ga0496118_0046630 Ga0496118_0046630_1366_2679 411
104 3300005366 Ga0070659_100000366 Ga0070659_10000036625 412
105 3300048928 Ga0496125_0000097 Ga0496125_0000097_118745_120058 412
106 3300049571 Ga0501034_0000227 Ga0501034_0000227_67511_68815 412
107 3300013105 Ga0157369_10034622 Ga0157369_100346223 413
108 3300013105 Ga0157369_10056591 Ga0157369_100565912 413
109 3300047320 Ga0495672_0060560 Ga0495672_0060560_485_1789 413
110 3300048925 Ga0496122_0015273 Ga0496122_0015273_4464_5768 413
111 3300048928 Ga0496125_0010773 Ga0496125_0010773_4133_5437 413
112 3300049579 Ga0501043_0002454 Ga0501043_0002454_12779_14092 413
113 3300049586 Ga0501070_0003401 Ga0501070_0003401_4583_5896 413
114 3300049589 Ga0501073_0028496 Ga0501073_0028496_1472_2785 413
115 3300049742 Ga0501080_0000084 Ga0501080_0000084_29768_31081 413
116 3300049744 Ga0501083_0019605 Ga0501083_0019605_737_2050 413
117 iso_pu_bacteria 2808606447 2809227148 413
118 iso_pu_bacteria 2852632344 2852633471 413
119 iso_pu_bacteria 2857720070 2857720557 413
120 iso_pu_bacteria 2928090899 2928092360 413
121 iso_pu_bacteria 2984580707 2984580876 413
122 3300044658 Ga0466972_0073538 Ga0466972_0073538_36_1340 414
123 3300048904 Ga0496101_0019611 Ga0496101_0019611_1720_3033 414
124 3300048907 Ga0496104_0031305 Ga0496104_0031305_661_1974 414
125 3300048908 Ga0496105_0082775 Ga0496105_0082775_988_2301 414
126 iso_pu_bacteria 2585428157 2588108203 414
127 iso_pu_bacteria 2643221566 2643848071 414
128 iso_pu_bacteria 2643221572 2643875010 414
129 iso_pu_bacteria 2643221575 2643885102 414
130 iso_pu_bacteria 2643221597 2643995605 414
131 iso_pu_bacteria 2643221669 2644382066 414
132 iso_pu_bacteria 2757320536 2758227244 414
133 iso_pu_bacteria 2773857758 2774381646 414
134 iso_pu_bacteria 2773857759 2774384720 414
135 iso_pu_bacteria 2773857763 2774399829 414
136 iso_pu_bacteria 2808606306 2808631445 414
137 iso_pu_bacteria 2821268502 2821269709 414
138 iso_pu_bacteria 2833709550 2833710655 414
139 iso_pu_bacteria 2870628048 2870630075 414
140 iso_pu_bacteria 2904509784 2904512698 414
141 iso_pu_bacteria 2906799679 2906800207 414
142 iso_pu_bacteria 2908678064 2908681304 414
143 iso_pu_bacteria 2919069694 2919071468 414
144 iso_pu_bacteria 2974324384 2974326049 414
145 iso_pu_bacteria 2977228692 2977231012 414
146 iso_pu_bacteria 2977236895 2977239806 414
147 iso_pu_bacteria 2977251589 2977253697 414
148 iso_pu_bacteria 2977264416 2977266248 414
149 iso_pu_bacteria 2984542743 2984545921 414
150 iso_pu_bacteria 8045830549 8045830883 414
151 3300048924 Ga0496121_0000040 Ga0496121_0000040_66808_68130 415
152 iso_pu_bacteria 2643221542 2643733359 415
153 iso_pu_bacteria 2643221553 2643786156 415
154 iso_pu_bacteria 2643221616 2644097095 415
155 iso_pu_bacteria 2643221630 2644169933 415
156 iso_pu_bacteria 2643221649 2644279273 415
157 iso_pu_bacteria 2643221724 2644680548 415
158 iso_pu_bacteria 2728369380 2730230007 415
159 iso_pu_bacteria 2747842429 2747952381 415
160 iso_pu_bacteria 2852663356 2852666920 415
161 iso_pu_bacteria 2852677369 2852679500 415
162 iso_pu_bacteria 2857723135 2857724210 415
163 iso_pu_bacteria 2884763398 2884765713 415
164 iso_pu_bacteria 2895660088 2895661136 415
165 iso_pu_bacteria 2897561785 2897563528 415
166 iso_pu_bacteria 2919395869 2919398305 415
167 iso_pu_bacteria 2946080515 2946080602 415
168 iso_pu_bacteria 2966921586 2966923325 415
169 iso_pu_bacteria 8004182704 8004184844 415
170 iso_pu_bacteria 8057345674 8057348984 415
171 3300048921 Ga0496118_0050988 Ga0496118_0050988_880_2250 416
172 iso_pu_bacteria 2643221546 2643753579 416
173 iso_pu_bacteria 2643221549 2643767426 416
174 iso_pu_bacteria 2643221619 2644110647 416
175 iso_pu_bacteria 2751185788 2753301680 416
176 iso_pu_bacteria 2844852863 2844855354 416
177 iso_pu_bacteria 2857733635 2857735505 416
178 iso_pu_bacteria 2870622029 2870623334 416
179 iso_pu_bacteria 2919042368 2919043619 416
180 iso_pu_bacteria 2919443155 2919445924 416
181 iso_pu_bacteria 2928104781 2928108271 416
182 iso_pu_bacteria 2984551494 2984553837 416
183 iso_pu_bacteria 8004212874 8004214384 416
184 3300003578 Ga0006562J51391_1014808 Ga0006562J51391_10148083 417
185 3300003578 Ga0006562J51391_1014811 Ga0006562J51391_10148116 417
186 3300006186 Ga0075369_10064901 Ga0075369_100649011 417
187 3300048908 Ga0496105_0117615 Ga0496105_0117615_864_2165 417
188 3300048912 Ga0496109_0083195 Ga0496109_0083195_91_1392 417
189 3300048913 Ga0496110_0114774 Ga0496110_0114774_61_1362 417
190 3300048916 Ga0496113_0013237 Ga0496113_0013237_117_1418 417
191 3300048917 Ga0496114_0023217 Ga0496114_0023217_317_1618 417
192 3300048917 Ga0496114_0044232 Ga0496114_0044232_476_1777 417
193 3300048920 Ga0496117_0000232 Ga0496117_0000232_47782_49083 417
194 3300048921 Ga0496118_0003838 Ga0496118_0003838_12666_13967 417
195 3300048922 Ga0496119_0012064 Ga0496119_0012064_3466_4767 417
196 3300048922 Ga0496119_0014073 Ga0496119_0014073_2636_3937 417
197 3300048923 Ga0496120_0001794 Ga0496120_0001794_12251_13552 417
198 3300048923 Ga0496120_0001809 Ga0496120_0001809_10549_11850 417
199 3300048925 Ga0496122_0000030 Ga0496122_0000030_159711_161012 417
200 3300048925 Ga0496122_0009370 Ga0496122_0009370_7980_9281 417
201 3300048926 Ga0496123_0000024 Ga0496123_0000024_159712_161013 417
202 3300048926 Ga0496123_0001799 Ga0496123_0001799_7991_9292 417
203 3300048927 Ga0496124_0009102 Ga0496124_0009102_1125_2426 417
204 3300048927 Ga0496124_0014332 Ga0496124_0014332_3680_4981 417
205 3300048927 Ga0496124_0018915 Ga0496124_0018915_2314_3612 417
206 3300048928 Ga0496125_0001405 Ga0496125_0001405_30366_31667 417
207 3300048928 Ga0496125_0011839 Ga0496125_0011839_6258_7559 417
208 3300048929 Ga0496126_0001194 Ga0496126_0001194_26729_28030 417
209 3300050516 nmdc:mga0sz30_38991_c1 nmdc:mga0sz30_38991_c1_224_1525 417
210 iso_pu_bacteria 2585428094 2587862534 417
211 iso_pu_bacteria 2643221635 2644199409 417
212 iso_pu_bacteria 2808606372 2808902370 417
213 iso_pu_bacteria 2844841374 2844842735 417
214 iso_pu_bacteria 2852643534 2852645339 417
215 iso_pu_bacteria 2862993130 2862996446 417
216 iso_pu_bacteria 2904430863 2904433171 417
217 iso_pu_bacteria 2904501621 2904502707 417
218 iso_pu_bacteria 2908674828 2908677610 417
219 iso_pu_bacteria 2909074476 2909075183 417
220 iso_pu_bacteria 2919039151 2919040596 417
221 iso_pu_bacteria 2919055335 2919058441 417
222 iso_pu_bacteria 2919523602 2919524824 417
223 iso_pu_bacteria 2928153084 2928156265 417
224 iso_pu_bacteria 2928500415 2928501580 417
225 iso_pu_bacteria 2939657138 2939657768 417
226 iso_pu_bacteria 2939660829 2939660949 417
227 iso_pu_bacteria 2964326757 2964326829 417
228 iso_pu_bacteria 8056037122 8056037721 417
229 3300003760 Ga0055527_1000001 Ga0055527_1000001549 418
230 3300003763 Ga0055529_1000019 Ga0055529_100001955 418
231 3300009036 Ga0105244_10049043 Ga0105244_100490433 418
232 3300009148 Ga0105243_10033572 Ga0105243_100335723 418
233 3300013102 Ga0157371_10001714 Ga0157371_100017146 418
234 3300025228 Ga0209672_100006 Ga0209672_100006426 418
235 3300025254 Ga0209148_1000015 Ga0209148_1000015270 418
236 3300025272 Ga0209455_1000013 Ga0209455_1000013270 418
237 3300025728 Ga0207655_1011660 Ga0207655_10116602 418
238 3300025935 Ga0207709_10015541 Ga0207709_100155413 418
239 3300037418 Ga0395900_0001424 Ga0395900_0001424_26960_28264 418
240 3300037466 Ga0395898_0000015 Ga0395898_0000015_114050_115354 418
241 3300049569 Ga0501032_0033951 Ga0501032_0033951_756_2060 418
242 3300049571 Ga0501034_0272202 Ga0501034_0272202_311_1615 418
243 3300049574 Ga0501038_0068046 Ga0501038_0068046_1661_2965 418
244 3300050492 nmdc:mga0yw44_16262_c1 nmdc:mga0yw44_16262_c1_231_1544 418
245 3300053140 Ga0500573_0004636 Ga0500573_0004636_4220_5524 418
246 3300009551 Ga0105238_10002073 Ga0105238_1000207317 419
247 3300010375 Ga0105239_10245650 Ga0105239_102456502 419
248 3300025913 Ga0207695_10092815 Ga0207695_100928153 419
249 3300025924 Ga0207694_10000073 Ga0207694_100000734 419
250 3300031995 Ga0307409_100130177 Ga0307409_1001301772 419
251 3300041452 Ga0451793_1762599 Ga0451793_1762599_4512_5819 419
252 3300044683 Ga0466965_0000049 Ga0466965_0000049_658_1965 419
253 3300046453 Ga0495627_001014 Ga0495627_001014_3966_5270 419
254 3300048905 Ga0496102_0080078 Ga0496102_0080078_1441_2748 419
255 3300048920 Ga0496117_0005009 Ga0496117_0005009_9504_10811 419
256 3300048921 Ga0496118_0009135 Ga0496118_0009135_7534_8841 419
257 3300048921 Ga0496118_0015993 Ga0496118_0015993_3841_5148 419
258 3300048926 Ga0496123_0012564 Ga0496123_0012564_5828_7135 419
259 3300048927 Ga0496124_0000439 Ga0496124_0000439_54962_56269 419
260 3300048927 Ga0496124_0022333 Ga0496124_0022333_2430_3737 419
261 3300048927 Ga0496124_0072562 Ga0496124_0072562_992_2299 419
262 3300048927 Ga0496124_0088642 Ga0496124_0088642_238_1545 419
263 3300048929 Ga0496126_0018282 Ga0496126_0018282_2379_3683 419
264 3300049571 Ga0501034_0118667 Ga0501034_0118667_657_1964 419
265 3300049579 Ga0501043_0088202 Ga0501043_0088202_685_1992 419
266 3300049581 Ga0501047_0279360 Ga0501047_0279360_191_1498 419
267 3300053080 Ga0500635_0000028 Ga0500635_0000028_36776_38083 419
268 3300053136 Ga0500559_0000102 Ga0500559_0000102_34108_35415 419
269 3300053140 Ga0500573_0000059 Ga0500573_0000059_18658_19965 419
270 3300053140 Ga0500573_0072836 Ga0500573_0072836_571_1878 419
271 3300053140 Ga0500573_0101899 Ga0500573_0101899_286_1593 419
272 3300053153 Ga0500616_0000088 Ga0500616_0000088_115969_117276 419
273 iso_pu_bacteria 2643221632 2644183647 419
274 iso_pu_bacteria 2946041624 2946044627 419
275 3300003756 Ga0055533_1000001 Ga0055533_10000011064 420
276 3300003759 Ga0055525_1000787 Ga0055525_10007879 420
277 3300003841 Ga0055541_1006497 Ga0055541_10064971 420
278 3300005288 Ga0065714_10071023 Ga0065714_100710233 420
279 3300005563 Ga0068855_100127183 Ga0068855_1001271832 420
280 3300025225 Ga0209566_100240 Ga0209566_10024047 420
281 3300025226 Ga0209674_100001 Ga0209674_1000011064 420
282 3300025230 Ga0209563_100001 Ga0209563_1000011064 420
283 3300025253 Ga0209677_100001 Ga0209677_1000011064 420
284 3300025909 Ga0207705_10015097 Ga0207705_100150973 420
285 3300025949 Ga0207667_10092697 Ga0207667_100926972 420
286 3300031649 Ga0307514_10009171 Ga0307514_100091715 420
287 3300041413 Ga0439465_0026706 Ga0439465_0026706_427_1737 420
288 3300041452 Ga0451793_1057580 Ga0451793_1057580_323_1639 420
289 3300048917 Ga0496114_0084448 Ga0496114_0084448_498_1808 420
290 3300048922 Ga0496119_0090198 Ga0496119_0090198_280_1590 420
291 3300049573 Ga0501037_0021132 Ga0501037_0021132_1501_2814 420
292 3300053104 Ga0500556_0000001 Ga0500556_0000001_115798_117108 420
293 3300053136 Ga0500559_0007192 Ga0500559_0007192_1298_2608 420
294 3300053136 Ga0500559_0095452 Ga0500559_0095452_14_1327 420
295 3300053139 Ga0500568_0000016 Ga0500568_0000016_95880_97190 420
296 3300053139 Ga0500568_0004426 Ga0500568_0004426_1493_2812 420
297 3300053139 Ga0500568_0007254 Ga0500568_0007254_2041_3357 420
298 iso_pu_bacteria 2857737099 2857737483 420
299 3300031901 Ga0307406_10000034 Ga0307406_1000003475 421
300 iso_pu_bacteria 2808606368 2808885397 421
301 iso_pu_bacteria 2811994872 2812322830 423
302 iso_pu_bacteria 2945968032 2945968132 423
303 3300048927 Ga0496124_0112783 Ga0496124_0112783_639_1988 425
304 iso_pu_bacteria 2946033335 2946033458 425
305 iso_pu_bacteria 2857729791 2857732514 426
306 iso_pu_bacteria 2928121344 2928122856 426
307 3300049569 Ga0501032_0056718 Ga0501032_0056718_307_1665 428
308 3300049570 Ga0501033_0021306 Ga0501033_0021306_1916_3271 428
309 3300049570 Ga0501033_0052880 Ga0501033_0052880_234_1592 428
310 3300049571 Ga0501034_0019134 Ga0501034_0019134_1934_3289 428
311 3300049572 Ga0501036_0160786 Ga0501036_0160786_229_1587 428
312 3300049573 Ga0501037_0000671 Ga0501037_0000671_17308_18666 428
313 3300049573 Ga0501037_0023861 Ga0501037_0023861_759_2114 428
314 3300049575 Ga0501039_0047498 Ga0501039_0047498_229_1587 428
315 3300049579 Ga0501043_0065644 Ga0501043_0065644_281_1636 428
316 3300049579 Ga0501043_0077652 Ga0501043_0077652_230_1588 428
317 3300049580 Ga0501046_0002489 Ga0501046_0002489_3987_5342 428
318 3300049580 Ga0501046_0002630 Ga0501046_0002630_5021_6379 428
319 3300049581 Ga0501047_0018681 Ga0501047_0018681_4490_5845 428
320 3300049582 Ga0501048_0017335 Ga0501048_0017335_65_1423 428
321 3300049584 Ga0501068_0026892 Ga0501068_0026892_1527_2885 428
322 3300049822 Ga0501035_0020532 Ga0501035_0020532_889_2244 428
323 3300049822 Ga0501035_0037684 Ga0501035_0037684_1149_2507 428
324 3300049823 Ga0501044_0043533 Ga0501044_0043533_1614_2969 428
325 3300001979 JGI24740J21852_10019477 JGI24740J21852_100194772 429

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00815

Histidinol_dh

Histidinol dehydrogenase

21

433

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4j0e-assembly1.cif.gz_B crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p1 space group 0.648 215 336
3mgg-assembly1.cif.gz_A crystal structure of methyl transferase from methanosarcina mazei 0.6312 224 331
4j0f-assembly1.cif.gz_A crystal structure of 3-hydroxyacyl-coa dehydrogenase from caenorhadbitis elegans in p212121 space group 0.62 224 336
2hdh-assembly1.cif.gz_B biochemical characterization and structure determination of human heart short chain l-3-hydroxyacyl coa dehydrogenase provide insight into catalytic mechanism 0.6022 224 335
6z5f-assembly2.cif.gz_BBB crystal structure of rat peroxisomal multifunctional enzyme type-1 (rpmfe1) complexed with 3-ketodecanoyl-coa and oxidised nicotinamide adenine dinucleotide 0.6022 223 335
ID Description Score Start End Superfamily
6an0A03 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9476 380 414 1.20.5.1300
af_P9WNW9_250_396_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.916 223 365 3.40.50.1980
af_P9WNW9_40_244_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.914 31 210 3.40.50.1980
af_Q9P777_34_236_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9126 31 205 3.40.50.1980
af_Q2FUT8_220_366_3.40.50.1980 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.8942 223 365 3.40.50.1980
ID Description Score Start End GO Terms
AF-A0A0K2R0V2-F1-model_v4 deleted 0.9799 37 190
AF-T1CPK4-F1-model_v4 Histidinol dehydrogenase, prokaryotic-type 0.9626 35 191 GO:0000105
GO:0004399
GO:0005829
GO:0046872
GO:0051287
AF-A0A7Y6E203-F1-model_v4 Histidinol dehydrogenase 0.9508 1 202 GO:0000105
GO:0004399
GO:0005829
GO:0046872
GO:0051287
AF-A0A533IZ70-F1-model_v4 deleted 0.9451 1 172
AF-A0A0K8Q7D0-F1-model_v4 Histidinol dehydrogenase 0.9438 1 203 GO:0000105
GO:0004399
GO:0005829
GO:0046872
GO:0051287

Feature Viewer

pLDDT pTM Quality
80.05 0.75 High
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Predicted Structure (AlphaFold2)

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