F407874

General Info

Members Datasets Scaffolds Average Seq Length
325 188 650 218

Family's Representative Sequence

Representative Sequence 3300025961|Ga0207712_10134626|Ga0207712_101346263
Length 239
Sequence VSPSQTTASAARESTVGRRVPGAVRVVIGEDDVLLREGICRLLAEGGFDVVAQAGDAEDFLRRALAHRPDVAVVDVKMPPGQEDDGLRAALELRRQRPETGILVLSQFYEEHYALELIGEHAEGVGYLLKERVGDVDAFMDAVSRVAAGGSALDPEIVGRMLGRRREDSPLERLSPREHDVLAAMAEGKSNKGIAEALVVTQAAVEKHVTSIFHKLELDPGATEHRRVLAVLTYMRDSS

Samples

Sample ID Description Type Environment
1 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
3 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
25 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
30 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
36 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
37 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
40 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
43 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
44 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
45 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
48 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
49 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
50 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
51 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
52 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
53 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
54 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
55 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
60 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
62 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
63 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
64 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
65 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
70 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
71 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
125 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
126 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
127 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
131 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
132 3300033547 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1 Metagenome Unclassified
133 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
134 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
135 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
136 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
137 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
138 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
139 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
140 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
141 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
142 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
145 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
146 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
147 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
150 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
151 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
152 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
153 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
154 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
155 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
156 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
157 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
158 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
159 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
160 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
161 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
167 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
168 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
169 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
170 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
171 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
172 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
173 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
174 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
175 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
176 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
177 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
184 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
185 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
186 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
187 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
188 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.69
Metatranscriptomes 0.31
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 16.92
Rhizosphere 80.31
Stem 0
Stem Tuber 0
Unclassified 2.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207712_10134626 3300025961 Bacteria 1888
2 JGI24749J21850_1012972 3300002076 Unclassified 1170
3 JGI24744J21845_10027848 3300002077 Bacteria 1090
4 Ga0070683_100020666 3300005329 Bacteria 5861
5 Ga0070683_100045293 3300005329 Bacteria 4059
6 Ga0068869_100090389 3300005334 Bacteria 2301
7 Ga0070682_100002743 3300005337 Bacteria 9756
8 Ga0070682_100027507 3300005337 Bacteria 3413
9 Ga0068868_100042774 3300005338 Bacteria 3537
10 Ga0070689_100032976 3300005340 Bacteria 3943
11 Ga0070691_10002900 3300005341 Bacteria 7690
12 Ga0070691_10394649 3300005341 Bacteria 778
13 Ga0070661_100013391 3300005344 Bacteria 5757
14 Ga0070668_100078060 3300005347 Bacteria 2589
15 Ga0070668_100138238 3300005347 Bacteria 1961
16 Ga0070671_100149174 3300005355 Bacteria 1974
17 Ga0070674_100002000 3300005356 Bacteria 11161
18 Ga0070674_100010768 3300005356 Bacteria 5545
19 Ga0070673_100014998 3300005364 Bacteria 5423
20 Ga0070673_100258578 3300005364 Bacteria 1520
21 Ga0070688_100126965 3300005365 Bacteria 1715
22 Ga0070667_100119713 3300005367 Bacteria 2290
23 Ga0070714_100128108 3300005435 Bacteria 2266
24 Ga0070714_100979153 3300005435 Bacteria 823
25 Ga0070713_100054100 3300005436 Bacteria 3329
26 Ga0070713_100215638 3300005436 Bacteria 1739
27 Ga0070710_10022152 3300005437 Bacteria 3320
28 Ga0070710_10047473 3300005437 Bacteria 2395
29 Ga0070701_10053021 3300005438 Bacteria 2109
30 Ga0070711_100016228 3300005439 Bacteria 4727
31 Ga0070711_100330405 3300005439 Bacteria 1220
32 Ga0070700_100000983 3300005441 Bacteria 14074
33 Ga0070700_100019854 3300005441 Bacteria 3883
34 Ga0070700_100021843 3300005441 Bacteria 3724
35 Ga0070694_100337029 3300005444 Unclassified 1165
36 Ga0070663_100015068 3300005455 Bacteria 4977
37 Ga0070678_100152279 3300005456 Bacteria 1864
38 Ga0070662_100082364 3300005457 Bacteria 2399
39 Ga0068867_100172490 3300005459 Bacteria 1714
40 Ga0070707_100043272 3300005468 Bacteria 4311
41 Ga0070707_100112406 3300005468 Bacteria 2642
42 Ga0070707_100124690 3300005468 Bacteria 2502
43 Ga0070698_100048229 3300005471 Bacteria 4352
44 Ga0070698_100201591 3300005471 Bacteria 1925
45 Ga0070684_100012415 3300005535 Bacteria 6827
46 Ga0070684_100068727 3300005535 Bacteria 3114
47 Ga0070672_100182713 3300005543 Unclassified 1748
48 Ga0070686_100064172 3300005544 Bacteria 2382
49 Ga0070696_100092360 3300005546 Bacteria 2157
50 Ga0070665_100062934 3300005548 Bacteria 3720
51 Ga0070704_100050797 3300005549 Bacteria 2917
52 Ga0070704_100088401 3300005549 Bacteria 2302
53 Ga0070704_100257023 3300005549 Bacteria 1437
54 Ga0068855_100490616 3300005563 Bacteria 1336
55 Ga0070664_100053391 3300005564 Bacteria 3426
56 Ga0070664_100068910 3300005564 Bacteria 3025
57 Ga0068854_100084589 3300005578 Bacteria 2348
58 Ga0068854_100121980 3300005578 Bacteria 1980
59 Ga0068856_100002350 3300005614 Bacteria 19453
60 Ga0070702_100003711 3300005615 Bacteria 6881
61 Ga0070702_100025873 3300005615 Bacteria 3149
62 Ga0068859_100037027 3300005617 Bacteria 4897
63 Ga0068864_100003966 3300005618 Bacteria 12185
64 Ga0068864_100254349 3300005618 Bacteria 1632
65 Ga0068866_10200414 3300005718 Bacteria 1192
66 Ga0068861_100028739 3300005719 Bacteria 4059
67 Ga0068861_100732083 3300005719 Bacteria 922
68 Ga0068870_10495982 3300005840 Bacteria 813
69 Ga0068863_100123510 3300005841 Bacteria 2470
70 Ga0068858_100042984 3300005842 Bacteria 4191
71 Ga0068860_100832433 3300005843 Bacteria 937
72 Ga0068860_101102822 3300005843 Bacteria 813
73 Ga0068862_100075909 3300005844 Bacteria 2908
74 Ga0068862_100160979 3300005844 Bacteria 2003
75 Ga0068862_100466912 3300005844 Bacteria 1192
76 Ga0081455_10027816 3300005937 Bacteria 5177
77 Ga0081455_10213658 3300005937 Bacteria 1435
78 Ga0081455_10368021 3300005937 Bacteria 1008
79 Ga0081538_10003430 3300005981 Bacteria 14993
80 Ga0081538_10040281 3300005981 Bacteria 2983
81 Ga0081538_10102291 3300005981 Bacteria 1438
82 Ga0081540_1000986 3300005983 Bacteria 25652
83 Ga0081540_1029252 3300005983 Bacteria 3074
84 Ga0081539_10003294 3300005985 Bacteria 20218
85 Ga0070717_10216148 3300006028 Bacteria 1683
86 Ga0070712_100003990 3300006175 Bacteria 9070
87 Ga0070712_100030824 3300006175 Bacteria 3608
88 Ga0070712_100130892 3300006175 Unclassified 1901
89 Ga0075428_100096236 3300006844 Bacteria 3227
90 Ga0075428_100184131 3300006844 Unclassified 2260
91 Ga0075431_100002329 3300006847 Bacteria 18258
92 Ga0075431_100045418 3300006847 Bacteria 4529
93 Ga0075433_10046605 3300006852 Bacteria 3770
94 Ga0075434_100010369 3300006871 Bacteria 8733
95 Ga0075434_100207917 3300006871 Bacteria 1978
96 Ga0097620_100037025 3300006931 Bacteria 4897
97 Ga0099795_10210629 3300007788 Bacteria 823
98 Ga0111539_10007650 3300009094 Bacteria 13806
99 Ga0111539_10026002 3300009094 Bacteria 7163
100 Ga0111539_10203079 3300009094 Bacteria 2311
101 Ga0111539_10254378 3300009094 Bacteria 2045
102 Ga0111539_10759448 3300009094 Bacteria 1128
103 Ga0105245_10000349 3300009098 Bacteria 43123
104 Ga0105245_10052958 3300009098 Bacteria 3642
105 Ga0105247_10046895 3300009101 Bacteria 2653
106 Ga0105247_10098459 3300009101 Bacteria 1867
107 Ga0105247_10307018 3300009101 Bacteria 1102
108 Ga0114129_10019656 3300009147 Bacteria 9614
109 Ga0114129_10126908 3300009147 Bacteria 3507
110 Ga0114129_10349673 3300009147 Bacteria 1959
111 Ga0105243_10024606 3300009148 Bacteria 4594
112 Ga0105243_10042040 3300009148 Bacteria 3576
113 Ga0105243_10075521 3300009148 Bacteria 2736
114 Ga0105242_10144509 3300009176 Bacteria 2068
115 Ga0105242_10220324 3300009176 Bacteria 1695
116 Ga0105248_10013358 3300009177 Bacteria 9039
117 Ga0105249_10077427 3300009553 Bacteria 3084
118 Ga0105249_10102513 3300009553 Bacteria 2694
119 Ga0105249_10387515 3300009553 Bacteria 1425
120 Ga0105239_10062365 3300010375 Bacteria 4092
121 Ga0105239_10726945 3300010375 Bacteria 1136
122 Ga0105246_10004886 3300011119 Bacteria 8164
123 Ga0105246_10087417 3300011119 Bacteria 2237
124 Ga0157369_10310049 3300013105 Bacteria 1641
125 Ga0157374_10026598 3300013296 Bacteria 5208
126 Ga0157378_10185205 3300013297 Bacteria 1961
127 Ga0157378_10225448 3300013297 Bacteria 1783
128 Ga0163162_10117785 3300013306 Bacteria 2758
129 Ga0163162_10391916 3300013306 Bacteria 1522
130 Ga0157372_10005495 3300013307 Bacteria 13464
131 Ga0157372_10695733 3300013307 Bacteria 1183
132 Ga0157375_10168720 3300013308 Bacteria 2335
133 Ga0157375_10333839 3300013308 Bacteria 1681
134 Ga0163163_10023986 3300014325 Bacteria 5802
135 Ga0163163_10182176 3300014325 Bacteria 2148
136 Ga0163163_10253650 3300014325 Bacteria 1810
137 Ga0157380_10965119 3300014326 Bacteria 883
138 Ga0157379_10828308 3300014968 Bacteria 875
139 Ga0207692_10039021 3300025898 Bacteria 2333
140 Ga0207692_10076452 3300025898 Bacteria 1778
141 Ga0207642_10137637 3300025899 Bacteria 1283
142 Ga0207642_10214251 3300025899 Bacteria 1072
143 Ga0207710_10065076 3300025900 Bacteria 1661
144 Ga0207688_10000559 3300025901 Bacteria 18175
145 Ga0207688_10091326 3300025901 Bacteria 1749
146 Ga0207680_10007783 3300025903 Bacteria 5236
147 Ga0207684_10247092 3300025910 Bacteria 1539
148 Ga0207684_10583346 3300025910 Bacteria 955
149 Ga0207695_10098856 3300025913 Bacteria 2917
150 Ga0207693_10010713 3300025915 Bacteria 7442
151 Ga0207663_10037804 3300025916 Bacteria 2913
152 Ga0207660_10412144 3300025917 Bacteria 1089
153 Ga0207660_10500559 3300025917 Bacteria 986
154 Ga0207649_10056620 3300025920 Bacteria 2449
155 Ga0207646_10683477 3300025922 Bacteria 918
156 Ga0207687_10004868 3300025927 Bacteria 8928
157 Ga0207687_10017091 3300025927 Bacteria 4769
158 Ga0207687_10103374 3300025927 Bacteria 2101
159 Ga0207700_10054742 3300025928 Bacteria 2996
160 Ga0207644_10105316 3300025931 Bacteria 2125
161 Ga0207644_10434526 3300025931 Bacteria 1077
162 Ga0207690_10245584 3300025932 Bacteria 1380
163 Ga0207706_10032306 3300025933 Bacteria 4662
164 Ga0207686_10072448 3300025934 Bacteria 2220
165 Ga0207709_10023473 3300025935 Bacteria 3511
166 Ga0207709_10062279 3300025935 Bacteria 2334
167 Ga0207670_10032987 3300025936 Bacteria 3333
168 Ga0207669_10007968 3300025937 Bacteria 4943
169 Ga0207669_10076595 3300025937 Bacteria 2124
170 Ga0207669_10163814 3300025937 Bacteria 1574
171 Ga0207704_10048708 3300025938 Bacteria 2543
172 Ga0207661_10003981 3300025944 Bacteria 10323
173 Ga0207661_10122644 3300025944 Bacteria 2215
174 Ga0207661_10160441 3300025944 Unclassified 1950
175 Ga0207679_10016628 3300025945 Bacteria 4887
176 Ga0207667_10418176 3300025949 Bacteria 1364
177 Ga0207651_10061535 3300025960 Bacteria 2612
178 Ga0207651_10372193 3300025960 Bacteria 1209
179 Ga0207712_10097467 3300025961 Bacteria 2178
180 Ga0207668_10088227 3300025972 Bacteria 2271
181 Ga0207668_10181376 3300025972 Bacteria 1661
182 Ga0207640_10013624 3300025981 Bacteria 4666
183 Ga0207658_10004425 3300025986 Bacteria 9772
184 Ga0207677_10258780 3300026023 Bacteria 1418
185 Ga0207677_10329010 3300026023 Bacteria 1273
186 Ga0207703_10485526 3300026035 Bacteria 1158
187 Ga0207639_10198019 3300026041 Bacteria 1721
188 Ga0207678_10018077 3300026067 Bacteria 6191
189 Ga0207708_10000898 3300026075 Bacteria 22330
190 Ga0207708_10018765 3300026075 Bacteria 5210
191 Ga0207708_10887543 3300026075 Bacteria 771
192 Ga0207702_10023256 3300026078 Bacteria 5139
193 Ga0207648_10387879 3300026089 Bacteria 1264
194 Ga0207676_10061900 3300026095 Bacteria 2965
195 Ga0207675_100212481 3300026118 Bacteria 1861
196 Ga0207675_100704460 3300026118 Bacteria 1019
197 Ga0207683_10275896 3300026121 Bacteria 1536
198 Ga0207698_10184953 3300026142 Bacteria 1850
199 Ga0268266_10000537 3300028379 Bacteria 52878
200 Ga0268265_10265711 3300028380 Bacteria 1528
201 Ga0268264_10022338 3300028381 Bacteria 5167
202 Ga0268264_11018771 3300028381 Bacteria 835
203 Ga0316176_1037617 3300030732 Bacteria 1113
204 Ga0307405_10174291 3300031731 Bacteria 1538
205 Ga0307405_10492450 3300031731 Bacteria 981
206 Ga0307406_10070337 3300031901 Bacteria 2291
207 Ga0307407_10113105 3300031903 Bacteria 1708
208 Ga0307409_100498337 3300031995 Bacteria 1185
209 Ga0307416_100443936 3300032002 Bacteria 1348
210 Ga0307414_10482742 3300032004 Bacteria 1093
211 Ga0316214_1000475 3300033545 Bacteria 4087
212 Ga0316212_1008357 3300033547 Bacteria 1489
213 Ga0373947_0190919 3300035725 Bacteria 1337
214 Ga0372808_017848 3300036459 Bacteria 1019
215 Ga0395900_0146111 3300037418 Bacteria 2418
216 Ga0395898_0095191 3300037466 Bacteria 2861
217 Ga0395898_0269249 3300037466 Bacteria 1625
218 Ga0395901_0202553 3300038443 Bacteria 2080
219 Ga0395901_0286336 3300038443 Bacteria 1711
220 Ga0395901_0411262 3300038443 Bacteria 1389
221 Ga0395901_0830590 3300038443 Bacteria 911
222 Ga0436363_0737124 3300039450 Bacteria 1750
223 Ga0451791_0474167 3300041451 Bacteria 1348
224 Ga0451853_0961744 3300041512 Bacteria 1342
225 Ga0439450_033022 3300042008 Bacteria 1171
226 Ga0466960_0000089 3300044901 Bacteria 30130
227 Ga0466960_0000162 3300044901 Bacteria 22545
228 Ga0466959_0445556 3300045049 Bacteria 878
229 Ga0466967_0217835 3300045976 Bacteria 1813
230 Ga0466967_0491396 3300045976 Bacteria 1203
231 Ga0495653_0215549 3300046463 Bacteria 1294
232 Ga0495608_0119878 3300046511 Bacteria 1688
233 Ga0495618_0060001 3300046514 Bacteria 2411
234 Ga0495618_0279160 3300046514 Bacteria 1042
235 Ga0495630_0155351 3300046517 Bacteria 1741
236 Ga0495640_0082856 3300046533 Bacteria 2129
237 Ga0495586_0275894 3300046535 Bacteria 961
238 Ga0495634_0213532 3300046642 Bacteria 1193
239 Ga0495634_0279825 3300046642 Bacteria 1013
240 Ga0495635_0049479 3300046663 Bacteria 2897
241 Ga0495658_0535434 3300046683 Bacteria 750
242 Ga0495604_0399673 3300047317 Bacteria 905
243 Ga0495674_0081388 3300047319 Bacteria 2778
244 Ga0495674_0106832 3300047319 Bacteria 2376
245 Ga0495672_0047043 3300047320 Bacteria 2569
246 Ga0495676_0390342 3300047321 Bacteria 925
247 Ga0495680_0023056 3300047322 Bacteria 5181
248 Ga0495684_0021013 3300047471 Bacteria 5028
249 Ga0495684_0029254 3300047471 Bacteria 4229
250 Ga0496100_0018077 3300048903 Bacteria 4175
251 Ga0496100_0038689 3300048903 Bacteria 3024
252 Ga0496100_0040869 3300048903 Bacteria 2953
253 Ga0496101_0003325 3300048904 Bacteria 10005
254 Ga0496101_0003550 3300048904 Bacteria 9726
255 Ga0496101_0006313 3300048904 Bacteria 7628
256 Ga0496101_0024402 3300048904 Bacteria 4185
257 Ga0496102_0000762 3300048905 Bacteria 31344
258 Ga0496102_0015764 3300048905 Bacteria 6586
259 Ga0496102_0018513 3300048905 Bacteria 6122
260 Ga0496102_0028923 3300048905 Bacteria 4954
261 Ga0496103_0023403 3300048906 Bacteria 3724
262 Ga0496103_0081307 3300048906 Bacteria 2038
263 Ga0496104_0002649 3300048907 Bacteria 15406
264 Ga0496104_0003889 3300048907 Bacteria 12928
265 Ga0496104_0249674 3300048907 Bacteria 1687
266 Ga0496105_0009622 3300048908 Bacteria 7565
267 Ga0496105_0016298 3300048908 Bacteria 5931
268 Ga0496105_0283567 3300048908 Bacteria 1335
269 Ga0496105_0462394 3300048908 Bacteria 1000
270 Ga0496105_0687537 3300048908 Bacteria 786
271 Ga0496106_0003999 3300048909 Bacteria 11019
272 Ga0496106_0004548 3300048909 Bacteria 10280
273 Ga0496106_0007410 3300048909 Bacteria 8109
274 Ga0496106_0031545 3300048909 Bacteria 3950
275 Ga0496106_0036882 3300048909 Bacteria 3657
276 Ga0496107_0001971 3300048910 Bacteria 13059
277 Ga0496107_0016765 3300048910 Bacteria 5150
278 Ga0496107_0038492 3300048910 Bacteria 3430
279 Ga0496107_0107101 3300048910 Bacteria 2053
280 Ga0496108_0004394 3300048911 Bacteria 11347
281 Ga0496108_0005860 3300048911 Bacteria 9963
282 Ga0496108_0012041 3300048911 Bacteria 7033
283 Ga0496109_0003310 3300048912 Bacteria 13457
284 Ga0496109_0016842 3300048912 Bacteria 6396
285 Ga0496109_0419294 3300048912 Bacteria 1264
286 Ga0496110_0024817 3300048913 Bacteria 5115
287 Ga0496110_0146559 3300048913 Bacteria 2135
288 Ga0496110_0250074 3300048913 Bacteria 1613
289 Ga0496111_0011962 3300048914 Bacteria 5865
290 Ga0496111_0013593 3300048914 Bacteria 5543
291 Ga0496112_0012491 3300048915 Bacteria 7804
292 Ga0496112_0112877 3300048915 Bacteria 2688
293 Ga0496112_0147420 3300048915 Bacteria 2321
294 Ga0496113_0021150 3300048916 Bacteria 4586
295 Ga0496113_0069084 3300048916 Bacteria 2682
296 Ga0496113_0130147 3300048916 Bacteria 1974
297 Ga0496114_0002780 3300048917 Bacteria 13394
298 Ga0496114_0010060 3300048917 Bacteria 7521
299 Ga0496114_0215388 3300048917 Bacteria 1685
300 Ga0496115_0004656 3300048918 Bacteria 9934
301 Ga0496115_0005552 3300048918 Bacteria 9179
302 Ga0496115_0277989 3300048918 Bacteria 1375
303 Ga0496115_0361093 3300048918 Bacteria 1183
304 Ga0496121_0152488 3300048924 Bacteria 1699
305 Ga0496121_0494194 3300048924 Bacteria 778
306 Ga0496124_0251229 3300048927 Bacteria 1308
307 nmdc:mga05p37_439025_c1 3300050507 Bacteria 1514
308 nmdc:mga05p37_76886_c1 3300050507 Bacteria 4109
309 nmdc:mga05p37_78949_c1 3300050507 Bacteria 4053
310 nmdc:mga06r32_14965_c1 3300050510 Bacteria 7042
311 nmdc:mga06r32_2833_c1 3300050510 Bacteria 15561
312 nmdc:mga08y16_134139_c1 3300050511 Bacteria 2573
313 nmdc:mga08y16_49222_c1 3300050511 Bacteria 4411
314 nmdc:mga08y16_9066_c1 3300050511 Bacteria 10443
315 nmdc:mga0n895_31881_c1 3300050512 Bacteria 5052
316 nmdc:mga0n895_56494_c1 3300050512 Bacteria 3867
317 nmdc:mga0rr50_267862_c1 3300050513 Bacteria 1423
318 nmdc:mga0rr50_289655_c1 3300050513 Unclassified 1368
319 nmdc:mga08x19_130799_c1 3300050514 Bacteria 1688
320 nmdc:mga0a205_74146_c1 3300050515 Bacteria 3288
321 nmdc:mga0a205_78668_c1 3300050515 Bacteria 3186
322 Ga0495601_0032026 3300053077 Bacteria 3270
323 Ga0495595_0005750 3300053084 Bacteria 5022
324 Ga0495619_0116813 3300053085 Bacteria 1826
325 Ga0500616_0053563 3300053153 Bacteria 2116
326 Ga0207712_10134626
327 JGI24749J21850_1012972
328 JGI24744J21845_10027848
329 Ga0070683_100020666
330 Ga0070683_100045293
331 Ga0068869_100090389
332 Ga0070682_100002743
333 Ga0070682_100027507
334 Ga0068868_100042774
335 Ga0070689_100032976
336 Ga0070691_10002900
337 Ga0070691_10394649
338 Ga0070661_100013391
339 Ga0070668_100078060
340 Ga0070668_100138238
341 Ga0070671_100149174
342 Ga0070674_100002000
343 Ga0070674_100010768
344 Ga0070673_100014998
345 Ga0070673_100258578
346 Ga0070688_100126965
347 Ga0070667_100119713
348 Ga0070714_100128108
349 Ga0070714_100979153
350 Ga0070713_100054100
351 Ga0070713_100215638
352 Ga0070710_10022152
353 Ga0070710_10047473
354 Ga0070701_10053021
355 Ga0070711_100016228
356 Ga0070711_100330405
357 Ga0070700_100000983
358 Ga0070700_100019854
359 Ga0070700_100021843
360 Ga0070694_100337029
361 Ga0070663_100015068
362 Ga0070678_100152279
363 Ga0070662_100082364
364 Ga0068867_100172490
365 Ga0070707_100043272
366 Ga0070707_100112406
367 Ga0070707_100124690
368 Ga0070698_100048229
369 Ga0070698_100201591
370 Ga0070684_100012415
371 Ga0070684_100068727
372 Ga0070672_100182713
373 Ga0070686_100064172
374 Ga0070696_100092360
375 Ga0070665_100062934
376 Ga0070704_100050797
377 Ga0070704_100088401
378 Ga0070704_100257023
379 Ga0068855_100490616
380 Ga0070664_100053391
381 Ga0070664_100068910
382 Ga0068854_100084589
383 Ga0068854_100121980
384 Ga0068856_100002350
385 Ga0070702_100003711
386 Ga0070702_100025873
387 Ga0068859_100037027
388 Ga0068864_100003966
389 Ga0068864_100254349
390 Ga0068866_10200414
391 Ga0068861_100028739
392 Ga0068861_100732083
393 Ga0068870_10495982
394 Ga0068863_100123510
395 Ga0068858_100042984
396 Ga0068860_100832433
397 Ga0068860_101102822
398 Ga0068862_100075909
399 Ga0068862_100160979
400 Ga0068862_100466912
401 Ga0081455_10027816
402 Ga0081455_10213658
403 Ga0081455_10368021
404 Ga0081538_10003430
405 Ga0081538_10040281
406 Ga0081538_10102291
407 Ga0081540_1000986
408 Ga0081540_1029252
409 Ga0081539_10003294
410 Ga0070717_10216148
411 Ga0070712_100003990
412 Ga0070712_100030824
413 Ga0070712_100130892
414 Ga0075428_100096236
415 Ga0075428_100184131
416 Ga0075431_100002329
417 Ga0075431_100045418
418 Ga0075433_10046605
419 Ga0075434_100010369
420 Ga0075434_100207917
421 Ga0097620_100037025
422 Ga0099795_10210629
423 Ga0111539_10007650
424 Ga0111539_10026002
425 Ga0111539_10203079
426 Ga0111539_10254378
427 Ga0111539_10759448
428 Ga0105245_10000349
429 Ga0105245_10052958
430 Ga0105247_10046895
431 Ga0105247_10098459
432 Ga0105247_10307018
433 Ga0114129_10019656
434 Ga0114129_10126908
435 Ga0114129_10349673
436 Ga0105243_10024606
437 Ga0105243_10042040
438 Ga0105243_10075521
439 Ga0105242_10144509
440 Ga0105242_10220324
441 Ga0105248_10013358
442 Ga0105249_10077427
443 Ga0105249_10102513
444 Ga0105249_10387515
445 Ga0105239_10062365
446 Ga0105239_10726945
447 Ga0105246_10004886
448 Ga0105246_10087417
449 Ga0157369_10310049
450 Ga0157374_10026598
451 Ga0157378_10185205
452 Ga0157378_10225448
453 Ga0163162_10117785
454 Ga0163162_10391916
455 Ga0157372_10005495
456 Ga0157372_10695733
457 Ga0157375_10168720
458 Ga0157375_10333839
459 Ga0163163_10023986
460 Ga0163163_10182176
461 Ga0163163_10253650
462 Ga0157380_10965119
463 Ga0157379_10828308
464 Ga0207692_10039021
465 Ga0207692_10076452
466 Ga0207642_10137637
467 Ga0207642_10214251
468 Ga0207710_10065076
469 Ga0207688_10000559
470 Ga0207688_10091326
471 Ga0207680_10007783
472 Ga0207684_10247092
473 Ga0207684_10583346
474 Ga0207695_10098856
475 Ga0207693_10010713
476 Ga0207663_10037804
477 Ga0207660_10412144
478 Ga0207660_10500559
479 Ga0207649_10056620
480 Ga0207646_10683477
481 Ga0207687_10004868
482 Ga0207687_10017091
483 Ga0207687_10103374
484 Ga0207700_10054742
485 Ga0207644_10105316
486 Ga0207644_10434526
487 Ga0207690_10245584
488 Ga0207706_10032306
489 Ga0207686_10072448
490 Ga0207709_10023473
491 Ga0207709_10062279
492 Ga0207670_10032987
493 Ga0207669_10007968
494 Ga0207669_10076595
495 Ga0207669_10163814
496 Ga0207704_10048708
497 Ga0207661_10003981
498 Ga0207661_10122644
499 Ga0207661_10160441
500 Ga0207679_10016628
501 Ga0207667_10418176
502 Ga0207651_10061535
503 Ga0207651_10372193
504 Ga0207712_10097467
505 Ga0207668_10088227
506 Ga0207668_10181376
507 Ga0207640_10013624
508 Ga0207658_10004425
509 Ga0207677_10258780
510 Ga0207677_10329010
511 Ga0207703_10485526
512 Ga0207639_10198019
513 Ga0207678_10018077
514 Ga0207708_10000898
515 Ga0207708_10018765
516 Ga0207708_10887543
517 Ga0207702_10023256
518 Ga0207648_10387879
519 Ga0207676_10061900
520 Ga0207675_100212481
521 Ga0207675_100704460
522 Ga0207683_10275896
523 Ga0207698_10184953
524 Ga0268266_10000537
525 Ga0268265_10265711
526 Ga0268264_10022338
527 Ga0268264_11018771
528 Ga0316176_1037617
529 Ga0307405_10174291
530 Ga0307405_10492450
531 Ga0307406_10070337
532 Ga0307407_10113105
533 Ga0307409_100498337
534 Ga0307416_100443936
535 Ga0307414_10482742
536 Ga0316214_1000475
537 Ga0316212_1008357
538 Ga0373947_0190919
539 Ga0372808_017848
540 Ga0395900_0146111
541 Ga0395898_0095191
542 Ga0395898_0269249
543 Ga0395901_0202553
544 Ga0395901_0286336
545 Ga0395901_0411262
546 Ga0395901_0830590
547 Ga0436363_0737124
548 Ga0451791_0474167
549 Ga0451853_0961744
550 Ga0439450_033022
551 Ga0466960_0000089
552 Ga0466960_0000162
553 Ga0466959_0445556
554 Ga0466967_0217835
555 Ga0466967_0491396
556 Ga0495653_0215549
557 Ga0495608_0119878
558 Ga0495618_0060001
559 Ga0495618_0279160
560 Ga0495630_0155351
561 Ga0495640_0082856
562 Ga0495586_0275894
563 Ga0495634_0213532
564 Ga0495634_0279825
565 Ga0495635_0049479
566 Ga0495658_0535434
567 Ga0495604_0399673
568 Ga0495674_0081388
569 Ga0495674_0106832
570 Ga0495672_0047043
571 Ga0495676_0390342
572 Ga0495680_0023056
573 Ga0495684_0021013
574 Ga0495684_0029254
575 Ga0496100_0018077
576 Ga0496100_0038689
577 Ga0496100_0040869
578 Ga0496101_0003325
579 Ga0496101_0003550
580 Ga0496101_0006313
581 Ga0496101_0024402
582 Ga0496102_0000762
583 Ga0496102_0015764
584 Ga0496102_0018513
585 Ga0496102_0028923
586 Ga0496103_0023403
587 Ga0496103_0081307
588 Ga0496104_0002649
589 Ga0496104_0003889
590 Ga0496104_0249674
591 Ga0496105_0009622
592 Ga0496105_0016298
593 Ga0496105_0283567
594 Ga0496105_0462394
595 Ga0496105_0687537
596 Ga0496106_0003999
597 Ga0496106_0004548
598 Ga0496106_0007410
599 Ga0496106_0031545
600 Ga0496106_0036882
601 Ga0496107_0001971
602 Ga0496107_0016765
603 Ga0496107_0038492
604 Ga0496107_0107101
605 Ga0496108_0004394
606 Ga0496108_0005860
607 Ga0496108_0012041
608 Ga0496109_0003310
609 Ga0496109_0016842
610 Ga0496109_0419294
611 Ga0496110_0024817
612 Ga0496110_0146559
613 Ga0496110_0250074
614 Ga0496111_0011962
615 Ga0496111_0013593
616 Ga0496112_0012491
617 Ga0496112_0112877
618 Ga0496112_0147420
619 Ga0496113_0021150
620 Ga0496113_0069084
621 Ga0496113_0130147
622 Ga0496114_0002780
623 Ga0496114_0010060
624 Ga0496114_0215388
625 Ga0496115_0004656
626 Ga0496115_0005552
627 Ga0496115_0277989
628 Ga0496115_0361093
629 Ga0496121_0152488
630 Ga0496121_0494194
631 Ga0496124_0251229
632 nmdc:mga05p37_439025_c1
633 nmdc:mga05p37_76886_c1
634 nmdc:mga05p37_78949_c1
635 nmdc:mga06r32_14965_c1
636 nmdc:mga06r32_2833_c1
637 nmdc:mga08y16_134139_c1
638 nmdc:mga08y16_49222_c1
639 nmdc:mga08y16_9066_c1
640 nmdc:mga0n895_31881_c1
641 nmdc:mga0n895_56494_c1
642 nmdc:mga0rr50_267862_c1
643 nmdc:mga0rr50_289655_c1
644 nmdc:mga08x19_130799_c1
645 nmdc:mga0a205_74146_c1
646 nmdc:mga0a205_78668_c1
647 Ga0495601_0032026
648 Ga0495595_0005750
649 Ga0495619_0116813
650 Ga0500616_0053563

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00196

GerE

Bacterial regulatory proteins, luxR family

172

230

0.96

PF00072

Response_reg

Response regulator receiver domain

26

143

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zlj-assembly2.cif.gz_C crystal structure of the mycobacterium tuberculosis hypoxic response regulator dosr c-terminal domain 0.9672 155 220
4wul-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 26bp dna 0.9465 155 219
3ulq-assembly1.cif.gz_B crystal structure of the anti-activator rapf complexed with the response regulator coma dna binding domain 0.9429 155 216
4wu4-assembly1.cif.gz_A crystal structure of e. faecalis dna binding domain liard191n complexed with 22bp dna 0.9412 151 219
7x1k-assembly1.cif.gz_B crystal structure of the flagellar expression regulator degu from listeria monocytogenes 0.936 152 219
ID Description Score Start End Superfamily
3cloA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.949 155 212 1.10.10.10
3ulqB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9429 155 216 1.10.10.10
4if4D02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9403 150 218 1.10.10.10
4if4C02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9398 150 218 1.10.10.10
af_O53213_1064_1134_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9354 154 220 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A3N0DSD5-F1-model_v4 Response regulator 0.9804 4 144 GO:0000160
GO:0004016
GO:0009190
AF-A0A538JGH7-F1-model_v4 Response regulator 0.977 1 138 GO:0000160
GO:0004016
GO:0009190
AF-A0A538J270-F1-model_v4 Response regulator 0.9763 3 147 GO:0000160
GO:0004016
GO:0009190
AF-A9WTE0-F1-model_v4 Two-component response regulator 0.9762 4 93 GO:0000160
AF-A0A6H9YBC7-F1-model_v4 Response regulator transcription factor 0.9734 6 142 GO:0000160
GO:0003677

Map