F407680

General Info

Members Datasets Scaffolds Average Seq Length
325 191 650 341

Family's Representative Sequence

Representative Sequence 3300005345|Ga0070692_10139457|Ga0070692_101394571
Length 375
Sequence MCFTVIERIVDNVFLSDAMFSAGKRFTGADRIRRLIDSLPTGRALAIATALLVSADAAAQPAEPFFARKTVTITIGYTAGGSYDLYGRMVARHLGKHIPGQPTLIAQNMPGAGSLKAANYLYEVAPKDGTALGVVVESAALEQALANPAVQYDAAKFTYVGRVATSNNIFMQWHTAKVQSLDDARRMETSLAGTGPGSIAETVPRLLNALTGTRFKLISGYPASSEAMLAMERGEVEGASSSWAAVKVGKQAWLRERKIRIILQTTPERIAELPDAPSLGEIGDTPEDRQVFALYASGSAIGRSVIAPPGLPAERVGALRDAFQGMVRDPDFIADLQRTNVELEPLPGAEVEQLVVRTLNVPATVRDRAKLAFGR

Samples

Sample ID Description Type Environment
1 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
2 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
35 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
39 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
44 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
56 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
60 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
61 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
62 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
63 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
64 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
100 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
101 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
102 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
103 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
104 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
105 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
106 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
107 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
108 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
109 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
110 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
111 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
112 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
113 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
114 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
115 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
116 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
117 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
118 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
125 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
126 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
127 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
128 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
129 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
130 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
131 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
132 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
133 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
134 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
135 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
138 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
139 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
140 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
143 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
144 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
145 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
146 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
147 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
148 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
149 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
150 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
151 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
152 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
153 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
154 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
158 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
168 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
169 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
170 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
171 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
172 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
173 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
174 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
175 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
176 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
177 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
178 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
179 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
180 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
181 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
182 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
183 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
184 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
185 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
186 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
187 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
188 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
189 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.69
Nodule 0
Rhizoplane 16.31
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 18.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070692_10139457 3300005345 Bacteria 1371
2 Ga0070670_100004740 3300005331 Bacteria 11413
3 Ga0070680_100045767 3300005336 Bacteria 3558
4 Ga0070680_100169411 3300005336 Bacteria 1837
5 Ga0070682_100090667 3300005337 Unclassified 1999
6 Ga0070660_100208067 3300005339 Unclassified 1588
7 Ga0070689_100038514 3300005340 Bacteria 3658
8 Ga0070689_100190974 3300005340 Bacteria 1668
9 Ga0070687_100173282 3300005343 Bacteria 1286
10 Ga0070669_100071016 3300005353 Bacteria 2575
11 Ga0070675_100279593 3300005354 Bacteria 1466
12 Ga0070675_100323639 3300005354 Unclassified 1362
13 Ga0070671_100114347 3300005355 Unclassified 2268
14 Ga0070674_100060034 3300005356 Bacteria 2649
15 Ga0070673_100098845 3300005364 Unclassified 2399
16 Ga0070688_100248387 3300005365 Bacteria 1266
17 Ga0070659_100193777 3300005366 Bacteria 1671
18 Ga0070714_100001180 3300005435 Bacteria 18804
19 Ga0070714_100151048 3300005435 Bacteria 2093
20 Ga0070713_100026660 3300005436 Bacteria 4541
21 Ga0070711_100142978 3300005439 Bacteria 1796
22 Ga0070700_100057977 3300005441 Unclassified 2431
23 Ga0070694_100115132 3300005444 Unclassified 1921
24 Ga0070708_100087867 3300005445 Unclassified 2825
25 Ga0070663_100080080 3300005455 Bacteria 2398
26 Ga0070678_100007086 3300005456 Bacteria 6630
27 Ga0070662_100231682 3300005457 Bacteria 1478
28 Ga0070681_10001222 3300005458 Bacteria 22366
29 Ga0070681_10009930 3300005458 Bacteria 9380
30 Ga0070681_10233617 3300005458 Unclassified 1753
31 Ga0070681_10440299 3300005458 Unclassified 1215
32 Ga0070699_100011080 3300005518 Bacteria 7795
33 Ga0070699_100281993 3300005518 Archaea 1488
34 Ga0070686_100101436 3300005544 Unclassified 1945
35 Ga0070696_100086476 3300005546 Unclassified 2226
36 Ga0070704_100021915 3300005549 Bacteria 4150
37 Ga0070704_100032006 3300005549 Bacteria 3542
38 Ga0070702_100172968 3300005615 Unclassified 1406
39 Ga0068851_10048798 3300005834 Bacteria 2146
40 Ga0068863_100108522 3300005841 Unclassified 2641
41 Ga0068863_100122226 3300005841 Unclassified 2483
42 Ga0068860_100333866 3300005843 Bacteria 1489
43 Ga0081455_10008894 3300005937 Bacteria 10384
44 Ga0081455_10013682 3300005937 Bacteria 7991
45 Ga0081455_10014091 3300005937 Bacteria 7858
46 Ga0081455_10236847 3300005937 Bacteria 1343
47 Ga0081538_10010431 3300005981 Bacteria 7618
48 Ga0081540_1063898 3300005983 Bacteria 1739
49 Ga0075365_10013196 3300006038 Bacteria 4929
50 Ga0075365_10086226 3300006038 Bacteria 2134
51 Ga0075365_10088260 3300006038 Bacteria 2109
52 Ga0075365_10258132 3300006038 Unclassified 1225
53 Ga0075364_10296903 3300006051 Bacteria 1100
54 Ga0070715_10103701 3300006163 Bacteria 1331
55 Ga0097621_100110800 3300006237 Unclassified 2319
56 Ga0097621_100226324 3300006237 Bacteria 1631
57 Ga0068871_100283651 3300006358 Bacteria 1449
58 Ga0075428_100007178 3300006844 Bacteria 12337
59 Ga0075428_100013809 3300006844 Bacteria 8993
60 Ga0075428_100055272 3300006844 Bacteria 4349
61 Ga0075428_100063532 3300006844 Bacteria 4042
62 Ga0075428_100194951 3300006844 Bacteria 2191
63 Ga0075430_100000015 3300006846 Bacteria 89952
64 Ga0075430_100000263 3300006846 Bacteria 36938
65 Ga0075430_100000289 3300006846 Bacteria 35411
66 Ga0075430_100003280 3300006846 Bacteria 13570
67 Ga0075430_100006431 3300006846 Bacteria 9905
68 Ga0075430_100017996 3300006846 Bacteria 6016
69 Ga0075431_100110108 3300006847 Bacteria 2842
70 Ga0075431_100125634 3300006847 Bacteria 2647
71 Ga0075433_10419666 3300006852 Unclassified 1180
72 Ga0075434_100173256 3300006871 Bacteria 2178
73 Ga0075429_100031205 3300006880 Bacteria 4631
74 Ga0075429_100165228 3300006880 Bacteria 1939
75 Ga0068865_100025844 3300006881 Bacteria 3867
76 Ga0075435_100047364 3300007076 Bacteria 3452
77 Ga0099795_10029931 3300007788 Unclassified 1865
78 Ga0099795_10072662 3300007788 Unclassified 1301
79 Ga0111539_10035666 3300009094 Bacteria 6021
80 Ga0105245_10148396 3300009098 Bacteria 2215
81 Ga0105245_10210871 3300009098 Bacteria 1869
82 Ga0105247_10032277 3300009101 Bacteria 3182
83 Ga0105247_10139634 3300009101 Bacteria 1586
84 Ga0114129_10006530 3300009147 Bacteria 16547
85 Ga0114129_10011626 3300009147 Bacteria 12531
86 Ga0114129_10128577 3300009147 Bacteria 3481
87 Ga0114129_10424574 3300009147 Bacteria 1748
88 Ga0105248_10223317 3300009177 Bacteria 2121
89 Ga0105237_10516689 3300009545 Bacteria 1201
90 Ga0099796_10036036 3300010159 Unclassified 1645
91 Ga0105239_10113884 3300010375 Bacteria 2999
92 Ga0105246_10229203 3300011119 Bacteria 1462
93 Ga0105246_10261167 3300011119 Unclassified 1380
94 Ga0157374_10226399 3300013296 Unclassified 1836
95 Ga0157374_10233402 3300013296 Bacteria 1808
96 Ga0157374_10307814 3300013296 Bacteria 1568
97 Ga0157378_10090144 3300013297 Bacteria 2786
98 Ga0157378_10321768 3300013297 Bacteria 1503
99 Ga0163162_10058289 3300013306 Bacteria 3890
100 Ga0163162_10155028 3300013306 Unclassified 2410
101 Ga0157375_10286616 3300013308 Bacteria 1810
102 Ga0157375_10483998 3300013308 Bacteria 1402
103 Ga0157380_10042276 3300014326 Bacteria 3562
104 Ga0157380_10110961 3300014326 Bacteria 2305
105 Ga0157380_10156406 3300014326 Unclassified 1976
106 Ga0157380_10456605 3300014326 Bacteria 1229
107 Ga0207710_10091596 3300025900 Bacteria 1423
108 Ga0207710_10094013 3300025900 Bacteria 1407
109 Ga0207688_10067582 3300025901 Bacteria 2023
110 Ga0207688_10115608 3300025901 Bacteria 1561
111 Ga0207643_10005682 3300025908 Bacteria 6669
112 Ga0207684_10019381 3300025910 Bacteria 5821
113 Ga0207707_10004662 3300025912 Bacteria 12038
114 Ga0207707_10184100 3300025912 Unclassified 1823
115 Ga0207707_10379604 3300025912 Unclassified 1215
116 Ga0207693_10118681 3300025915 Bacteria 2077
117 Ga0207660_10063234 3300025917 Bacteria 2668
118 Ga0207660_10177207 3300025917 Bacteria 1654
119 Ga0207657_10131066 3300025919 Bacteria 2055
120 Ga0207646_10370343 3300025922 Bacteria 1294
121 Ga0207681_10247126 3300025923 Bacteria 1391
122 Ga0207650_10004744 3300025925 Bacteria 9287
123 Ga0207659_10155489 3300025926 Bacteria 1790
124 Ga0207659_10178946 3300025926 Bacteria 1678
125 Ga0207700_10108641 3300025928 Bacteria 2228
126 Ga0207664_10098490 3300025929 Bacteria 2411
127 Ga0207664_10227238 3300025929 Bacteria 1621
128 Ga0207644_10055859 3300025931 Bacteria 2847
129 Ga0207690_10191819 3300025932 Bacteria 1546
130 Ga0207690_10255534 3300025932 Bacteria 1355
131 Ga0207706_10102224 3300025933 Bacteria 2522
132 Ga0207709_10149911 3300025935 Unclassified 1614
133 Ga0207670_10133551 3300025936 Bacteria 1822
134 Ga0207669_10010666 3300025937 Bacteria 4434
135 Ga0207691_10027318 3300025940 Bacteria 5351
136 Ga0207689_10037117 3300025942 Bacteria 4044
137 Ga0207679_10162978 3300025945 Bacteria 1827
138 Ga0207651_10044139 3300025960 Bacteria 2981
139 Ga0207712_10029007 3300025961 Bacteria 3708
140 Ga0207639_10139732 3300026041 Bacteria 2016
141 Ga0207678_10003210 3300026067 Bacteria 14781
142 Ga0207708_10021691 3300026075 Bacteria 4845
143 Ga0207648_10014395 3300026089 Bacteria 7310
144 Ga0207674_10208635 3300026116 Bacteria 1903
145 Ga0207675_100025000 3300026118 Bacteria 5557
146 Ga0207683_10044113 3300026121 Bacteria 3898
147 Ga0207698_10040886 3300026142 Bacteria 3450
148 Ga0207428_10024491 3300027907 Bacteria 5067
149 Ga0268264_10400417 3300028381 Unclassified 1319
150 Ga0307410_10105361 3300031852 Bacteria 2030
151 Ga0307406_10241744 3300031901 Bacteria 1354
152 Ga0307412_10030281 3300031911 Bacteria 3406
153 Ga0373926_0092201 3300035083 Unclassified 1127
154 Ga0373944_0057771 3300035089 Unclassified 1237
155 Ga0373923_0070849 3300035111 Bacteria 1497
156 Ga0373936_0039930 3300035113 Bacteria 1879
157 Ga0373945_0037487 3300035116 Bacteria 1740
158 Ga0373943_0060520 3300035170 Bacteria 1890
159 Ga0373935_0106035 3300035692 Bacteria 1859
160 Ga0373935_0114117 3300035692 Bacteria 1797
161 Ga0373927_0271807 3300035695 Bacteria 1114
162 Ga0373947_0019754 3300035725 Bacteria 3886
163 Ga0373947_0111932 3300035725 Bacteria 1726
164 Ga0373937_0010673 3300036401 Bacteria 8034
165 Ga0373937_0248330 3300036401 Unclassified 1677
166 Ga0373937_0447199 3300036401 Unclassified 1227
167 Ga0373925_0010319 3300037068 Bacteria 6777
168 Ga0373925_0030910 3300037068 Bacteria 3933
169 Ga0373925_0031756 3300037068 Bacteria 3884
170 Ga0373925_0042007 3300037068 Bacteria 3391
171 Ga0373925_0181646 3300037068 Bacteria 1665
172 Ga0395899_0011328 3300037312 Bacteria 6830
173 Ga0395899_0063262 3300037312 Bacteria 2722
174 Ga0395900_0005207 3300037418 Bacteria 13642
175 Ga0395900_0019104 3300037418 Bacteria 6988
176 Ga0395900_0078102 3300037418 Bacteria 3401
177 Ga0395900_0163843 3300037418 Bacteria 2267
178 Ga0395900_0321443 3300037418 Unclassified 1528
179 Ga0395898_0001625 3300037466 Bacteria 30490
180 Ga0395901_0020809 3300038443 Bacteria 6716
181 Ga0395901_0021661 3300038443 Bacteria 6584
182 Ga0395901_0060133 3300038443 Bacteria 3953
183 Ga0436360_1028725 3300039438 Bacteria 1481
184 Ga0466957_0018437 3300044842 Bacteria 4099
185 Ga0466959_0026734 3300045049 Bacteria 4279
186 Ga0495603_0085783 3300046455 Bacteria 1843
187 Ga0495629_0105122 3300046459 Bacteria 1969
188 Ga0495641_0028192 3300046461 Bacteria 2720
189 Ga0495651_0218705 3300046462 Bacteria 1320
190 Ga0495582_0012329 3300046473 Bacteria 4708
191 Ga0495582_0099176 3300046473 Bacteria 1630
192 Ga0495582_0134106 3300046473 Bacteria 1400
193 Ga0495582_0140524 3300046473 Bacteria 1368
194 Ga0495664_0133500 3300046477 Unclassified 1504
195 Ga0495584_0002695 3300046491 Bacteria 9979
196 Ga0495584_0050478 3300046491 Bacteria 2095
197 Ga0495585_0120259 3300046492 Bacteria 1390
198 Ga0495594_0112927 3300046499 Unclassified 1532
199 Ga0495628_0052596 3300046516 Unclassified 3217
200 Ga0495665_0054160 3300046531 Bacteria 2120
201 Ga0495622_0025452 3300046557 Unclassified 2764
202 Ga0495622_0044386 3300046557 Bacteria 2066
203 Ga0495668_0129445 3300046616 Unclassified 1382
204 Ga0495635_0152184 3300046663 Bacteria 1575
205 Ga0495588_0058588 3300046674 Bacteria 1991
206 Ga0495647_0033028 3300046681 Bacteria 1932
207 Ga0495658_0011153 3300046683 Bacteria 4511
208 Ga0495658_0077393 3300046683 Bacteria 1945
209 Ga0495613_0075443 3300046689 Bacteria 2455
210 Ga0495613_0100947 3300046689 Bacteria 2084
211 Ga0495624_0026775 3300046690 Bacteria 3778
212 Ga0495672_0130710 3300047320 Archaea 1321
213 Ga0495676_0013979 3300047321 Bacteria 7192
214 Ga0495676_0129905 3300047321 Bacteria 1820
215 Ga0495676_0163829 3300047321 Bacteria 1570
216 Ga0495680_0141873 3300047322 Bacteria 1757
217 Ga0495684_0195179 3300047471 Bacteria 1495
218 Ga0496100_0033099 3300048903 Bacteria 3231
219 Ga0496100_0033790 3300048903 Bacteria 3203
220 Ga0496100_0073574 3300048903 Unclassified 2287
221 Ga0496100_0086472 3300048903 Bacteria 2130
222 Ga0496100_0110427 3300048903 Unclassified 1909
223 Ga0496101_0027073 3300048904 Bacteria 3989
224 Ga0496101_0081037 3300048904 Bacteria 2399
225 Ga0496101_0224391 3300048904 Bacteria 1459
226 Ga0496101_0230402 3300048904 Bacteria 1440
227 Ga0496101_0298622 3300048904 Unclassified 1261
228 Ga0496102_0086898 3300048905 Bacteria 2888
229 Ga0496103_0079498 3300048906 Bacteria 2060
230 Ga0496104_0008498 3300048907 Bacteria 9132
231 Ga0496104_0033255 3300048907 Bacteria 4802
232 Ga0496104_0038875 3300048907 Bacteria 4454
233 Ga0496104_0058307 3300048907 Bacteria 3654
234 Ga0496104_0076960 3300048907 Bacteria 3178
235 Ga0496104_0148036 3300048907 Bacteria 2254
236 Ga0496104_0244396 3300048907 Bacteria 1707
237 Ga0496105_0019018 3300048908 Bacteria 5535
238 Ga0496105_0026175 3300048908 Bacteria 4755
239 Ga0496105_0115832 3300048908 Bacteria 2210
240 Ga0496106_0020510 3300048909 Bacteria 4905
241 Ga0496106_0032194 3300048909 Unclassified 3909
242 Ga0496106_0110287 3300048909 Unclassified 2142
243 Ga0496107_0020121 3300048910 Bacteria 4712
244 Ga0496107_0093811 3300048910 Bacteria 2195
245 Ga0496107_0274104 3300048910 Bacteria 1256
246 Ga0496108_0001022 3300048911 Bacteria 21780
247 Ga0496108_0011800 3300048911 Bacteria 7107
248 Ga0496108_0119669 3300048911 Bacteria 2258
249 Ga0496109_0034460 3300048912 Bacteria 4559
250 Ga0496109_0061222 3300048912 Bacteria 3440
251 Ga0496109_0064622 3300048912 Bacteria 3349
252 Ga0496110_0023212 3300048913 Bacteria 5274
253 Ga0496111_0042916 3300048914 Bacteria 3248
254 Ga0496111_0077482 3300048914 Bacteria 2423
255 Ga0496111_0102696 3300048914 Bacteria 2102
256 Ga0496112_0010909 3300048915 Bacteria 8272
257 Ga0496112_0064394 3300048915 Bacteria 3617
258 Ga0496113_0020872 3300048916 Bacteria 4613
259 Ga0496113_0102102 3300048916 Bacteria 2223
260 Ga0496113_0346083 3300048916 Bacteria 1192
261 Ga0496114_0003597 3300048917 Bacteria 11911
262 Ga0496114_0038422 3300048917 Bacteria 3961
263 Ga0496114_0066886 3300048917 Bacteria 3014
264 Ga0496114_0070455 3300048917 Bacteria 2937
265 Ga0496114_0172548 3300048917 Unclassified 1885
266 Ga0496114_0267394 3300048917 Unclassified 1506
267 Ga0496115_0001995 3300048918 Bacteria 14586
268 Ga0496115_0011333 3300048918 Bacteria 6683
269 Ga0496115_0074113 3300048918 Bacteria 2764
270 Ga0496115_0342870 3300048918 Bacteria 1219
271 Ga0501033_0200910 3300049570 Unclassified 1424
272 Ga0501034_0234931 3300049571 Bacteria 1781
273 Ga0501037_0139183 3300049573 Bacteria 1738
274 Ga0501037_0190087 3300049573 Bacteria 1454
275 Ga0501038_0125484 3300049574 Bacteria 2113
276 Ga0501038_0409860 3300049574 Bacteria 1047
277 Ga0501042_0086054 3300049578 Bacteria 2254
278 Ga0501070_0240002 3300049586 Bacteria 1484
279 Ga0501071_0102070 3300049587 Unclassified 2115
280 Ga0501072_0322268 3300049588 Bacteria 1228
281 Ga0501075_0423409 3300049591 Unclassified 1015
282 Ga0501079_0075887 3300049741 Bacteria 2600
283 Ga0501045_0037521 3300049824 Bacteria 3523
284 nmdc:mga03n38_16205_c1 3300050490 Bacteria 2895
285 nmdc:mga00v17_131528_c1 3300050491 Unclassified 1599
286 nmdc:mga0yw44_3924_c1 3300050492 Bacteria 6710
287 nmdc:mga04h51_17799_c1 3300050495 Bacteria 2084
288 nmdc:mga05p37_14894_c1 3300050507 Bacteria 9338
289 nmdc:mga05p37_16915_c1 3300050507 Bacteria 8794
290 nmdc:mga05p37_290702_c1 3300050507 Bacteria 1523
291 nmdc:mga05p37_39434_c1 3300050507 Bacteria 5799
292 nmdc:mga05p37_430916_c1 3300050507 Bacteria 1532
293 nmdc:mga09592_166695_c1 3300050508 Bacteria 1904
294 nmdc:mga0qj67_129_c1 3300050509 Bacteria 50064
295 nmdc:mga0qj67_168_c1 3300050509 Bacteria 43793
296 nmdc:mga0qj67_173750_c1 3300050509 Unclassified 1749
297 nmdc:mga0qj67_1743_c1 3300050509 Bacteria 15374
298 nmdc:mga0qj67_61_c1 3300050509 Bacteria 80164
299 nmdc:mga0qj67_7127_c1 3300050509 Bacteria 8249
300 nmdc:mga06r32_112041_c1 3300050510 Bacteria 2685
301 nmdc:mga06r32_180024_c1 3300050510 Bacteria 2099
302 nmdc:mga08y16_207861_c1 3300050511 Bacteria 2027
303 nmdc:mga08y16_21969_c1 3300050511 Bacteria 6736
304 nmdc:mga08y16_51220_c1 3300050511 Bacteria 4319
305 nmdc:mga0n895_23127_c1 3300050512 Bacteria 5837
306 nmdc:mga0n895_258616_c1 3300050512 Bacteria 1767
307 nmdc:mga0n895_651190_c1 3300050512 Bacteria 1052
308 nmdc:mga0rr50_53453_c1 3300050513 Bacteria 3005
309 nmdc:mga08x19_342365_c1 3300050514 Unclassified 1043
310 nmdc:mga08x19_6343_c1 3300050514 Bacteria 7003
311 nmdc:mga0a205_326233_c1 3300050515 Bacteria 1405
312 nmdc:mga0a205_497791_c1 3300050515 Unclassified 1076
313 Ga0495601_0135159 3300053077 Unclassified 1607
314 Ga0495601_0213913 3300053077 Bacteria 1259
315 Ga0495612_0067638 3300053078 Unclassified 1486
316 Ga0495655_0053700 3300053083 Unclassified 1076
317 Ga0495619_0008787 3300053085 Bacteria 6389
318 Ga0495619_0035254 3300053085 Bacteria 3254
319 Ga0495619_0090426 3300053085 Unclassified 2072
320 Ga0500642_0103373 3300053130 Unclassified 1327
321 Ga0500622_0061855 3300053156 Bacteria 1908
322 Ga0500645_038163 3300053730 Bacteria 1426
323 Ga0501084_0050666 3300054114 Bacteria 3474
324 Ga0530510_0267347 3300061734 Bacteria 1276
325 Ga0530510_0329716 3300061734 Unclassified 1145
326 Ga0070692_10139457
327 Ga0070670_100004740
328 Ga0070680_100045767
329 Ga0070680_100169411
330 Ga0070682_100090667
331 Ga0070660_100208067
332 Ga0070689_100038514
333 Ga0070689_100190974
334 Ga0070687_100173282
335 Ga0070669_100071016
336 Ga0070675_100279593
337 Ga0070675_100323639
338 Ga0070671_100114347
339 Ga0070674_100060034
340 Ga0070673_100098845
341 Ga0070688_100248387
342 Ga0070659_100193777
343 Ga0070714_100001180
344 Ga0070714_100151048
345 Ga0070713_100026660
346 Ga0070711_100142978
347 Ga0070700_100057977
348 Ga0070694_100115132
349 Ga0070708_100087867
350 Ga0070663_100080080
351 Ga0070678_100007086
352 Ga0070662_100231682
353 Ga0070681_10001222
354 Ga0070681_10009930
355 Ga0070681_10233617
356 Ga0070681_10440299
357 Ga0070699_100011080
358 Ga0070699_100281993
359 Ga0070686_100101436
360 Ga0070696_100086476
361 Ga0070704_100021915
362 Ga0070704_100032006
363 Ga0070702_100172968
364 Ga0068851_10048798
365 Ga0068863_100108522
366 Ga0068863_100122226
367 Ga0068860_100333866
368 Ga0081455_10008894
369 Ga0081455_10013682
370 Ga0081455_10014091
371 Ga0081455_10236847
372 Ga0081538_10010431
373 Ga0081540_1063898
374 Ga0075365_10013196
375 Ga0075365_10086226
376 Ga0075365_10088260
377 Ga0075365_10258132
378 Ga0075364_10296903
379 Ga0070715_10103701
380 Ga0097621_100110800
381 Ga0097621_100226324
382 Ga0068871_100283651
383 Ga0075428_100007178
384 Ga0075428_100013809
385 Ga0075428_100055272
386 Ga0075428_100063532
387 Ga0075428_100194951
388 Ga0075430_100000015
389 Ga0075430_100000263
390 Ga0075430_100000289
391 Ga0075430_100003280
392 Ga0075430_100006431
393 Ga0075430_100017996
394 Ga0075431_100110108
395 Ga0075431_100125634
396 Ga0075433_10419666
397 Ga0075434_100173256
398 Ga0075429_100031205
399 Ga0075429_100165228
400 Ga0068865_100025844
401 Ga0075435_100047364
402 Ga0099795_10029931
403 Ga0099795_10072662
404 Ga0111539_10035666
405 Ga0105245_10148396
406 Ga0105245_10210871
407 Ga0105247_10032277
408 Ga0105247_10139634
409 Ga0114129_10006530
410 Ga0114129_10011626
411 Ga0114129_10128577
412 Ga0114129_10424574
413 Ga0105248_10223317
414 Ga0105237_10516689
415 Ga0099796_10036036
416 Ga0105239_10113884
417 Ga0105246_10229203
418 Ga0105246_10261167
419 Ga0157374_10226399
420 Ga0157374_10233402
421 Ga0157374_10307814
422 Ga0157378_10090144
423 Ga0157378_10321768
424 Ga0163162_10058289
425 Ga0163162_10155028
426 Ga0157375_10286616
427 Ga0157375_10483998
428 Ga0157380_10042276
429 Ga0157380_10110961
430 Ga0157380_10156406
431 Ga0157380_10456605
432 Ga0207710_10091596
433 Ga0207710_10094013
434 Ga0207688_10067582
435 Ga0207688_10115608
436 Ga0207643_10005682
437 Ga0207684_10019381
438 Ga0207707_10004662
439 Ga0207707_10184100
440 Ga0207707_10379604
441 Ga0207693_10118681
442 Ga0207660_10063234
443 Ga0207660_10177207
444 Ga0207657_10131066
445 Ga0207646_10370343
446 Ga0207681_10247126
447 Ga0207650_10004744
448 Ga0207659_10155489
449 Ga0207659_10178946
450 Ga0207700_10108641
451 Ga0207664_10098490
452 Ga0207664_10227238
453 Ga0207644_10055859
454 Ga0207690_10191819
455 Ga0207690_10255534
456 Ga0207706_10102224
457 Ga0207709_10149911
458 Ga0207670_10133551
459 Ga0207669_10010666
460 Ga0207691_10027318
461 Ga0207689_10037117
462 Ga0207679_10162978
463 Ga0207651_10044139
464 Ga0207712_10029007
465 Ga0207639_10139732
466 Ga0207678_10003210
467 Ga0207708_10021691
468 Ga0207648_10014395
469 Ga0207674_10208635
470 Ga0207675_100025000
471 Ga0207683_10044113
472 Ga0207698_10040886
473 Ga0207428_10024491
474 Ga0268264_10400417
475 Ga0307410_10105361
476 Ga0307406_10241744
477 Ga0307412_10030281
478 Ga0373926_0092201
479 Ga0373944_0057771
480 Ga0373923_0070849
481 Ga0373936_0039930
482 Ga0373945_0037487
483 Ga0373943_0060520
484 Ga0373935_0106035
485 Ga0373935_0114117
486 Ga0373927_0271807
487 Ga0373947_0019754
488 Ga0373947_0111932
489 Ga0373937_0010673
490 Ga0373937_0248330
491 Ga0373937_0447199
492 Ga0373925_0010319
493 Ga0373925_0030910
494 Ga0373925_0031756
495 Ga0373925_0042007
496 Ga0373925_0181646
497 Ga0395899_0011328
498 Ga0395899_0063262
499 Ga0395900_0005207
500 Ga0395900_0019104
501 Ga0395900_0078102
502 Ga0395900_0163843
503 Ga0395900_0321443
504 Ga0395898_0001625
505 Ga0395901_0020809
506 Ga0395901_0021661
507 Ga0395901_0060133
508 Ga0436360_1028725
509 Ga0466957_0018437
510 Ga0466959_0026734
511 Ga0495603_0085783
512 Ga0495629_0105122
513 Ga0495641_0028192
514 Ga0495651_0218705
515 Ga0495582_0012329
516 Ga0495582_0099176
517 Ga0495582_0134106
518 Ga0495582_0140524
519 Ga0495664_0133500
520 Ga0495584_0002695
521 Ga0495584_0050478
522 Ga0495585_0120259
523 Ga0495594_0112927
524 Ga0495628_0052596
525 Ga0495665_0054160
526 Ga0495622_0025452
527 Ga0495622_0044386
528 Ga0495668_0129445
529 Ga0495635_0152184
530 Ga0495588_0058588
531 Ga0495647_0033028
532 Ga0495658_0011153
533 Ga0495658_0077393
534 Ga0495613_0075443
535 Ga0495613_0100947
536 Ga0495624_0026775
537 Ga0495672_0130710
538 Ga0495676_0013979
539 Ga0495676_0129905
540 Ga0495676_0163829
541 Ga0495680_0141873
542 Ga0495684_0195179
543 Ga0496100_0033099
544 Ga0496100_0033790
545 Ga0496100_0073574
546 Ga0496100_0086472
547 Ga0496100_0110427
548 Ga0496101_0027073
549 Ga0496101_0081037
550 Ga0496101_0224391
551 Ga0496101_0230402
552 Ga0496101_0298622
553 Ga0496102_0086898
554 Ga0496103_0079498
555 Ga0496104_0008498
556 Ga0496104_0033255
557 Ga0496104_0038875
558 Ga0496104_0058307
559 Ga0496104_0076960
560 Ga0496104_0148036
561 Ga0496104_0244396
562 Ga0496105_0019018
563 Ga0496105_0026175
564 Ga0496105_0115832
565 Ga0496106_0020510
566 Ga0496106_0032194
567 Ga0496106_0110287
568 Ga0496107_0020121
569 Ga0496107_0093811
570 Ga0496107_0274104
571 Ga0496108_0001022
572 Ga0496108_0011800
573 Ga0496108_0119669
574 Ga0496109_0034460
575 Ga0496109_0061222
576 Ga0496109_0064622
577 Ga0496110_0023212
578 Ga0496111_0042916
579 Ga0496111_0077482
580 Ga0496111_0102696
581 Ga0496112_0010909
582 Ga0496112_0064394
583 Ga0496113_0020872
584 Ga0496113_0102102
585 Ga0496113_0346083
586 Ga0496114_0003597
587 Ga0496114_0038422
588 Ga0496114_0066886
589 Ga0496114_0070455
590 Ga0496114_0172548
591 Ga0496114_0267394
592 Ga0496115_0001995
593 Ga0496115_0011333
594 Ga0496115_0074113
595 Ga0496115_0342870
596 Ga0501033_0200910
597 Ga0501034_0234931
598 Ga0501037_0139183
599 Ga0501037_0190087
600 Ga0501038_0125484
601 Ga0501038_0409860
602 Ga0501042_0086054
603 Ga0501070_0240002
604 Ga0501071_0102070
605 Ga0501072_0322268
606 Ga0501075_0423409
607 Ga0501079_0075887
608 Ga0501045_0037521
609 nmdc:mga03n38_16205_c1
610 nmdc:mga00v17_131528_c1
611 nmdc:mga0yw44_3924_c1
612 nmdc:mga04h51_17799_c1
613 nmdc:mga05p37_14894_c1
614 nmdc:mga05p37_16915_c1
615 nmdc:mga05p37_290702_c1
616 nmdc:mga05p37_39434_c1
617 nmdc:mga05p37_430916_c1
618 nmdc:mga09592_166695_c1
619 nmdc:mga0qj67_129_c1
620 nmdc:mga0qj67_168_c1
621 nmdc:mga0qj67_173750_c1
622 nmdc:mga0qj67_1743_c1
623 nmdc:mga0qj67_61_c1
624 nmdc:mga0qj67_7127_c1
625 nmdc:mga06r32_112041_c1
626 nmdc:mga06r32_180024_c1
627 nmdc:mga08y16_207861_c1
628 nmdc:mga08y16_21969_c1
629 nmdc:mga08y16_51220_c1
630 nmdc:mga0n895_23127_c1
631 nmdc:mga0n895_258616_c1
632 nmdc:mga0n895_651190_c1
633 nmdc:mga0rr50_53453_c1
634 nmdc:mga08x19_342365_c1
635 nmdc:mga08x19_6343_c1
636 nmdc:mga0a205_326233_c1
637 nmdc:mga0a205_497791_c1
638 Ga0495601_0135159
639 Ga0495601_0213913
640 Ga0495612_0067638
641 Ga0495655_0053700
642 Ga0495619_0008787
643 Ga0495619_0035254
644 Ga0495619_0090426
645 Ga0500642_0103373
646 Ga0500622_0061855
647 Ga0500645_038163
648 Ga0501084_0050666
649 Ga0530510_0267347
650 Ga0530510_0329716

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

87

365

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.805 24 330
2f5x-assembly3.cif.gz_C structure of periplasmic binding protein bugd 0.7869 26 329
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.7846 26 331
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.7766 24 330
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.7736 16 325
ID Description Score Start End Superfamily
4x9tA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.7921 26 330 3.40.190.150
2qpqB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.7858 17 120 3.40.190.150
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.7791 124 237 3.40.190.10
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.77 124 237 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.764 26 331 3.40.190.150
ID Description Score Start End GO Terms
AF-A0A1Z8NXZ1-F1-model_v4 Uncharacterized protein 0.9812 21 330 GO:0016020
AF-A0A534TW27-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9762 17 116
AF-A0A1Q4BG78-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9742 30 331
AF-A0A6N7GSX7-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9689 13 331
AF-A0A537SCH3-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9685 19 331

Map