F407630

General Info

Members Datasets Scaffolds Average Seq Length
324 241 648 570

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|8025530807|8025534400
Length 638
Sequence SVPSVPSPSGRPVEVRERRVRTGGIELCVAELGDPRRPTVLLVHGYPDSKEVWSQVAERLAERFHVVLYDVRGHGGSTAPKPLRGGFTLEKLTDDFLAVADAVSPDRPVHLVGHDWGSVQGWEFVTVRRTKGRIASFTSMSGPSLDHFGHWIKRRMTRPTPRALGQLLGQGAKSWYVYLLHTPVLPELAWRGPLGRRWPKILDRFEKVPPARADAGGTGSAGAYPTASLPEDAAHGAWLYRDNINARLRRPRADAHAHVPVQLITPTGDAFLSERLYDDLERWVPQLVRRTLPAKHWVPRTRPDQLAFWITEFVSAHEPEPESAKDGDDAAGADGDAVAVGPAGKARRESRARRARDLVASGPYGERFGGQLVLVTGAASGIGRATAFAFAESGARVVVVDRDGEGAARTAEMARLIGAPRAWAETVDVGDEEAMEKLAEKVAAEYGTVDVLVNNAGIGLSGPFLDTTSEDWKKVLDVNLWGVIHGCRIFGGQMAARGQGGHIVNTASAAAYQPSRALPAYSTSKAAVLMLSECLRAELAGQGIGVSAICPGFVNTAITSTARFTGVSAEEEKRRRKRTARLYGLRNYPPEKVADAILRAVVRNEAVVPVTPEARGARLLSRFAPRTLRAIARLEPPL

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
8 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
9 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
10 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
13 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
25 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
26 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
30 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
31 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
35 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
50 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
51 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
52 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
53 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
54 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
55 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
56 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
57 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
58 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
59 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
62 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
63 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
64 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
65 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
66 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
67 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
68 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
69 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
70 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
71 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
72 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
73 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
77 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
84 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
87 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
88 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
89 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
90 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
91 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
92 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
93 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
94 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
95 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
96 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
97 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
98 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
99 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
100 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
101 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
102 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
103 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
104 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
105 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
106 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
107 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
108 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
109 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
110 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
111 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
112 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
119 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
120 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
121 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
122 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
123 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
124 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
125 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
126 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
127 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
128 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
129 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
130 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
137 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
146 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
147 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
148 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
150 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
151 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
152 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
154 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
155 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
156 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
157 2582581312 Streptomyces atratus OK008 Isolate Rhizosphere
158 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
159 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
160 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
161 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
162 2643221548 Streptomyces sp. Root55 Isolate Unclassified
163 2643221578 Streptomyces sp. Root63 Isolate Unclassified
164 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
165 2643221647 Streptomyces sp. Root369 Isolate Unclassified
166 2643221670 Streptomyces sp. Root431 Isolate Unclassified
167 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
168 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
169 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
170 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
171 2643221714 Streptomyces sp. Root264 Isolate Unclassified
172 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
173 2784746763 Streptomyces ossamyceticus SAI-001 Isolate Unclassified
174 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
175 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
176 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
177 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
178 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
179 2808606448 Streptomyces sp. 193411 Isolate Unclassified
180 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
181 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
182 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
183 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
184 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
185 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
186 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
187 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
188 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
189 2862574272 Streptomyces sp. AcE210 Isolate Nodule
190 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
191 2867369537 Streptomyces sp. Z26 Isolate Unclassified
192 2867428634 Streptomyces sp. RP5T Isolate Unclassified
193 2867475112 Streptomyces sp. TM32 Isolate Unclassified
194 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
195 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
196 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
197 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
198 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
199 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
200 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
201 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
202 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
203 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
204 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
205 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
206 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
207 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
208 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
209 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
210 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
211 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
212 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
213 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
214 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
215 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
216 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
217 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
218 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
219 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
220 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
221 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
222 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
223 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
224 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
225 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
226 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
227 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
228 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
229 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
230 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
231 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
232 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
233 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
234 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
235 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
236 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified
237 8048406513 Streptomyces heilongjiangensis NEAU-W2 Isolate Unclassified
238 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
239 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
240 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere
241 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 71.91
Metatranscriptomes 0.62
Isolates 27.47

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.95
Nodule 0.93
Rhizoplane 0
Rhizosphere 70.68
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10030739 3300003316 Bacteria 3090
2 rootH2_10082578 3300003320 Bacteria 3623
3 rootH1_10011733 3300003323 Bacteria 3538
4 rootH1_10011734 3300003323 Bacteria 10986
5 rootH1_10029491 3300003323 Bacteria 4461
6 JGI25160J50197_1004987 3300003354 Bacteria 5628
7 Ga0006562J51391_1125759 3300003578 Bacteria 5390
8 Ga0006562J51391_1125760 3300003578 Bacteria 6750
9 Ga0055532_1001288 3300003758 Bacteria 7272
10 Ga0055527_1000443 3300003760 Bacteria 16457
11 Ga0055527_1000445 3300003760 Bacteria 16426
12 Ga0055535_1001099 3300003761 Bacteria 16457
13 Ga0055535_1001101 3300003761 Bacteria 16426
14 Ga0055542_1001117 3300003762 Bacteria 15992
15 Ga0055529_1000252 3300003763 Bacteria 65454
16 Ga0055528_1001806 3300003790 Bacteria 12262
17 Ga0058692_1001314 3300003856 Bacteria 9349
18 Ga0070709_10020480 3300005434 Bacteria 3837
19 Ga0070714_100002227 3300005435 Bacteria 14286
20 Ga0070714_100046310 3300005435 Bacteria 3689
21 Ga0070713_100038159 3300005436 Bacteria 3889
22 Ga0070710_10000122 3300005437 Bacteria 36506
23 Ga0070711_100003698 3300005439 Bacteria 8957
24 Ga0070706_100009601 3300005467 Bacteria 8998
25 Ga0070698_100000546 3300005471 Bacteria 40175
26 Ga0070697_100031771 3300005536 Bacteria 4248
27 Ga0070717_10035707 3300006028 Bacteria 4027
28 Ga0070717_10039435 3300006028 Bacteria 3843
29 Ga0075363_100010183 3300006048 Bacteria 4448
30 Ga0070716_100002596 3300006173 Bacteria 8344
31 Ga0070712_100000686 3300006175 Bacteria 19993
32 Ga0075367_10000542 3300006178 Bacteria 14315
33 Ga0105240_10000363 3300009093 Bacteria 85111
34 Ga0105243_10072034 3300009148 Bacteria 2796
35 Ga0105246_10000694 3300011119 Bacteria 18971
36 Ga0182008_10002887 3300014497 Bacteria 10637
37 Ga0183367_1008 3300015688 Bacteria 490626
38 Ga0209672_100020 3300025228 Bacteria 429003
39 Ga0209672_100032 3300025228 Bacteria 324684
40 Ga0209147_100012 3300025229 Bacteria 681990
41 Ga0209147_100024 3300025229 Bacteria 429003
42 Ga0209147_100063 3300025229 Bacteria 241980
43 Ga0209258_100030 3300025242 Bacteria 470208
44 Ga0209258_100121 3300025242 Bacteria 180843
45 Ga0209148_1000022 3300025254 Bacteria 681990
46 Ga0209148_1000291 3300025254 Bacteria 75215
47 Ga0209455_1000024 3300025272 Bacteria 676133
48 Ga0209455_1000263 3300025272 Bacteria 60487
49 Ga0209673_1000056 3300025273 Bacteria 271069
50 Ga0207426_1000755 3300025302 Bacteria 36197
51 Ga0207426_1001873 3300025302 Bacteria 15425
52 Ga0207426_1008012 3300025302 Bacteria 4337
53 Ga0207692_10000172 3300025898 Bacteria 20623
54 Ga0207699_10020937 3300025906 Bacteria 3515
55 Ga0207695_10000328 3300025913 Bacteria 113378
56 Ga0207693_10001433 3300025915 Bacteria 21142
57 Ga0207663_10005046 3300025916 Bacteria 6629
58 Ga0207700_10000216 3300025928 Bacteria 34369
59 Ga0207664_10032616 3300025929 Bacteria 3994
60 Ga0207709_10041151 3300025935 Bacteria 2772
61 Ga0207665_10001519 3300025939 Bacteria 15611
62 Ga0207691_10084450 3300025940 Bacteria 2850
63 Ga0209371_1000076 3300027312 Bacteria 195166
64 Ga0209371_1012529 3300027312 Bacteria 2444
65 Ga0209813_10013922 3300027866 Bacteria 2157
66 Ga0307515_10002535 3300028794 Bacteria 39481
67 Ga0307515_10121271 3300028794 Bacteria 2959
68 Ga0268256_1000087 3300030500 Bacteria 157659
69 Ga0307511_10004454 3300030521 Bacteria 14303
70 Ga0307511_10045446 3300030521 Bacteria 3628
71 Ga0307512_10002787 3300030522 Bacteria 21303
72 Ga0307509_10003492 3300031507 Bacteria 23750
73 Ga0307509_10007593 3300031507 Bacteria 14117
74 Ga0307509_10022096 3300031507 Bacteria 7181
75 Ga0307508_10004181 3300031616 Bacteria 14199
76 Ga0307516_10037018 3300031730 Bacteria 4879
77 Ga0307518_10045139 3300031838 Bacteria 3205
78 Ga0307507_10027569 3300033179 Bacteria 6084
79 Ga0307507_10066573 3300033179 Bacteria 3300
80 Ga0307510_10004078 3300033180 Bacteria 17133
81 Ga0307510_10025021 3300033180 Bacteria 6892
82 Ga0395898_0002856 3300037466 Bacteria 19744
83 Ga0395901_0022394 3300038443 Bacteria 6475
84 Ga0436365_1266014 3300039437 Bacteria 2614
85 Ga0439436_0003350 3300041404 Bacteria 4863
86 Ga0439439_0000046 3300041406 Bacteria 15395
87 Ga0451853_0324200 3300041512 Bacteria 7412
88 Ga0451853_0546299 3300041512 Bacteria 2155
89 Ga0439433_0000559 3300041999 Bacteria 7051
90 Ga0439457_000147 3300042014 Bacteria 18100
91 Ga0439457_011294 3300042014 Bacteria 2034
92 Ga0439462_0000778 3300042015 Bacteria 6634
93 Ga0450894_000157 3300042131 Bacteria 11985
94 Ga0450903_000572 3300042138 Bacteria 7559
95 Ga0466972_0006302 3300044658 Bacteria 5960
96 Ga0466972_0008615 3300044658 Bacteria 5116
97 Ga0466972_0027378 3300044658 Bacteria 2821
98 Ga0466965_0000371 3300044683 Bacteria 15294
99 Ga0466966_0001648 3300044684 Bacteria 14399
100 Ga0466966_0006360 3300044684 Bacteria 7812
101 Ga0466961_0001402 3300044693 Bacteria 14941
102 Ga0466963_0003464 3300044694 Bacteria 9043
103 Ga0466963_0008214 3300044694 Bacteria 6256
104 Ga0466964_0001779 3300044706 Bacteria 7472
105 Ga0466957_0005272 3300044842 Bacteria 7241
106 Ga0466960_0002082 3300044901 Bacteria 7444
107 Ga0466959_0002895 3300045049 Bacteria 11079
108 Ga0466958_0062270 3300045836 Bacteria 2274
109 Ga0466967_0020023 3300045976 Bacteria 5396
110 Ga0495592_0006560 3300046454 Bacteria 8671
111 Ga0495592_0010791 3300046454 Bacteria 6889
112 Ga0495603_0000888 3300046455 Bacteria 17217
113 Ga0495603_0002200 3300046455 Bacteria 11483
114 Ga0495603_0005744 3300046455 Bacteria 7422
115 Ga0495603_0039732 3300046455 Bacteria 2817
116 Ga0495629_0001684 3300046459 Bacteria 17360
117 Ga0495629_0005176 3300046459 Bacteria 9759
118 Ga0495629_0007807 3300046459 Bacteria 7876
119 Ga0495629_0021386 3300046459 Bacteria 4617
120 Ga0495629_0022032 3300046459 Bacteria 4543
121 Ga0495629_0038897 3300046459 Bacteria 3349
122 Ga0495651_0002962 3300046462 Bacteria 13120
123 Ga0495582_0005756 3300046473 Bacteria 6904
124 Ga0495662_0003289 3300046476 Bacteria 8178
125 Ga0495662_0013172 3300046476 Bacteria 4027
126 Ga0495662_0017129 3300046476 Bacteria 3508
127 Ga0495662_0018561 3300046476 Bacteria 3366
128 Ga0495664_0000206 3300046477 Bacteria 28424
129 Ga0495594_0000748 3300046499 Bacteria 16646
130 Ga0495594_0020231 3300046499 Bacteria 3544
131 Ga0495606_0040332 3300046507 Bacteria 3138
132 Ga0495620_0001310 3300046515 Bacteria 15113
133 Ga0495620_0009868 3300046515 Bacteria 5057
134 Ga0495631_0005481 3300046518 Bacteria 6634
135 Ga0495648_0032266 3300046524 Bacteria 3439
136 Ga0495666_0022207 3300046526 Bacteria 3141
137 Ga0495652_0010525 3300046529 Bacteria 8379
138 Ga0495654_0020127 3300046530 Bacteria 3481
139 Ga0495640_0011191 3300046533 Bacteria 6907
140 Ga0495640_0021906 3300046533 Bacteria 4681
141 Ga0495587_0035127 3300046536 Bacteria 3020
142 Ga0495587_0035441 3300046536 Bacteria 3005
143 Ga0495609_0011151 3300046538 Bacteria 4290
144 Ga0495597_0004806 3300046542 Bacteria 7297
145 Ga0495645_0076057 3300046543 Bacteria 2416
146 Ga0495622_0006986 3300046557 Bacteria 5240
147 Ga0495668_0021152 3300046616 Bacteria 3734
148 Ga0495634_0006416 3300046642 Bacteria 8937
149 Ga0495634_0017967 3300046642 Bacteria 5040
150 Ga0495634_0065816 3300046642 Bacteria 2400
151 Ga0495611_0036456 3300046648 Bacteria 2182
152 Ga0495625_0027611 3300046660 Bacteria 4268
153 Ga0495635_0000427 3300046663 Bacteria 26692
154 Ga0495635_0008328 3300046663 Bacteria 7240
155 Ga0495588_0004993 3300046674 Bacteria 5891
156 Ga0495588_0026688 3300046674 Bacteria 2885
157 Ga0495657_0001293 3300046675 Bacteria 21757
158 Ga0495657_0015409 3300046675 Bacteria 5594
159 Ga0495646_0001489 3300046680 Bacteria 13936
160 Ga0495613_0000629 3300046689 Bacteria 28044
161 Ga0495613_0005092 3300046689 Bacteria 9850
162 Ga0495613_0019637 3300046689 Bacteria 5036
163 Ga0495613_0034694 3300046689 Bacteria 3746
164 Ga0495624_0042691 3300046690 Bacteria 2897
165 Ga0495649_0013738 3300046694 Bacteria 4662
166 Ga0495649_0040106 3300046694 Bacteria 2565
167 Ga0495589_0008715 3300046794 Bacteria 5282
168 Ga0495589_0028352 3300046794 Bacteria 2826
169 Ga0495600_0078867 3300046809 Bacteria 2150
170 Ga0495581_0013758 3300047315 Bacteria 4692
171 Ga0495581_0068997 3300047315 Bacteria 2044
172 Ga0495604_0000676 3300047317 Bacteria 28890
173 Ga0495604_0006734 3300047317 Bacteria 9109
174 Ga0495604_0044323 3300047317 Bacteria 3476
175 Ga0495636_0003835 3300047318 Bacteria 5862
176 Ga0495674_0120371 3300047319 Bacteria 2218
177 Ga0495672_0020786 3300047320 Bacteria 4293
178 Ga0495676_0001354 3300047321 Bacteria 21050
179 Ga0495676_0007900 3300047321 Bacteria 9755
180 Ga0495676_0034035 3300047321 Bacteria 4279
181 Ga0495680_0023507 3300047322 Bacteria 5122
182 Ga0495683_0015278 3300047323 Bacteria 3997
183 Ga0495683_0021645 3300047323 Bacteria 3313
184 Ga0495687_001793 3300047443 Bacteria 18950
185 Ga0495687_001814 3300047443 Bacteria 18789
186 Ga0495687_018085 3300047443 Bacteria 3494
187 Ga0495687_023606 3300047443 Bacteria 2935
188 Ga0495685_001943 3300047447 Bacteria 6401
189 Ga0495685_007093 3300047447 Bacteria 3691
190 Ga0495685_007780 3300047447 Bacteria 3546
191 Ga0495681_0030086 3300047470 Bacteria 2770
192 Ga0495602_0007604 3300048088 Bacteria 11331
193 Ga0495614_0000151 3300048089 Bacteria 25354
194 Ga0495614_0019760 3300048089 Bacteria 2914
195 Ga0495626_0010978 3300048091 Bacteria 4806
196 Ga0501031_0003300 3300049568 Bacteria 10353
197 Ga0501031_0028008 3300049568 Bacteria 3672
198 Ga0501032_0007776 3300049569 Bacteria 7817
199 Ga0501032_0037813 3300049569 Bacteria 3289
200 Ga0501033_0037591 3300049570 Bacteria 3623
201 Ga0501034_0028191 3300049571 Bacteria 5713
202 Ga0501034_0072684 3300049571 Bacteria 3448
203 Ga0501034_0149890 3300049571 Bacteria 2308
204 Ga0501036_0016132 3300049572 Bacteria 6243
205 Ga0501036_0024595 3300049572 Bacteria 5079
206 Ga0501037_0003251 3300049573 Bacteria 11788
207 Ga0501038_0002128 3300049574 Bacteria 18375
208 Ga0501040_0012044 3300049576 Bacteria 5659
209 Ga0501042_0000927 3300049578 Bacteria 16505
210 Ga0501043_0025569 3300049579 Bacteria 4632
211 Ga0501043_0037350 3300049579 Bacteria 3820
212 Ga0501046_0002925 3300049580 Bacteria 15798
213 Ga0501046_0009776 3300049580 Bacteria 8269
214 Ga0501046_0033247 3300049580 Bacteria 4169
215 Ga0501047_0000359 3300049581 Bacteria 51862
216 Ga0501047_0001120 3300049581 Bacteria 26611
217 Ga0501047_0028547 3300049581 Bacteria 5380
218 Ga0501047_0071109 3300049581 Bacteria 3349
219 Ga0501048_0001790 3300049582 Bacteria 16328
220 Ga0501069_0022715 3300049585 Bacteria 3415
221 Ga0501071_0006857 3300049587 Bacteria 7421
222 Ga0501076_0017609 3300049592 Bacteria 5432
223 Ga0501077_0088502 3300049593 Bacteria 1962
224 Ga0501080_0068381 3300049742 Bacteria 3304
225 Ga0501035_0011882 3300049822 Bacteria 8060
226 Ga0501035_0048644 3300049822 Bacteria 3803
227 Ga0501035_0074031 3300049822 Bacteria 3013
228 Ga0501044_0001371 3300049823 Bacteria 28580
229 Ga0501044_0091665 3300049823 Bacteria 3065
230 Ga0501044_0141414 3300049823 Bacteria 2395
231 Ga0500560_001768 3300053107 Bacteria 3889
232 Ga0500572_003637 3300053111 Bacteria 3507
233 Ga0466962_0006506 3300061719 Bacteria 5608
234 Ga0466962_0018313 3300061719 Bacteria 3369
235 Ga0530510_0096015 3300061734 Bacteria 2166
236 8025534400 8025530807 Bacteria 8495698
237 2547406051 2547132111 Bacteria 8013147
238 2554257554 2554235005 Bacteria 6457341
239 2585298514 2582581312 Bacteria 7308206
240 2585310827 2582581313 Bacteria 10042643
241 2585314513 2582581314 Bacteria 11452267
242 2616700321 2616644814 Bacteria 11555299
243 2616904866 2616644941 Bacteria 8510691
244 2643763109 2643221548 Bacteria 8053412
245 2643900120 2643221578 Bacteria 9213798
246 2643947867 2643221587 Bacteria 7586415
247 2644262913 2643221647 Bacteria 10741251
248 2644390695 2643221670 Bacteria 6497041
249 2644405656 2643221673 Bacteria 9196637
250 2644433732 2643221677 Bacteria 7584031
251 2644443124 2643221678 Bacteria 9540101
252 2644464021 2643221682 Bacteria 6743283
253 2644627054 2643221714 Bacteria 9015452
254 2784588995 2784132148 Bacteria 8627943
255 2785342855 2784746763 Bacteria 9783172
256 2785369947 2784746768 Bacteria 10036182
257 2786671019 2786546132 Bacteria 10419719
258 2804846389 2802429296 Bacteria 7227771
259 2808842437 2808606359 Bacteria 9866990
260 2808920953 2808606375 Bacteria 9466072
261 2809232596 2808606448 Bacteria 8656184
262 2811845780 2808606982 Bacteria 7791042
263 2812357657 2811994879 Bacteria 9313447
264 2812480178 2811994917 Bacteria 7761064
265 2819697277 2818991463 Bacteria 7948711
266 2852637264 2852635781 Bacteria 8251373
267 2862178984 2862178590 Bacteria 8583590
268 2862286044 2862281513 Bacteria 9621493
269 2862290857 2862290372 Bacteria 7471434
270 2862390494 2862382967 Bacteria 10317375
271 2862578871 2862574272 Bacteria 10567477
272 2863404157 2863404153 Bacteria 9672205
273 2863412741 2863404153 Bacteria 9672205
274 2867372523 2867369537 Bacteria 6501581
275 2867434830 2867428634 Bacteria 9590268
276 2867480926 2867475112 Bacteria 6909112
277 2873155357 2873151551 Bacteria 8625867
278 2875395209 2875391855 Bacteria 7600475
279 2877680682 2877676314 Bacteria 9512378
280 2912719398 2912715099 Bacteria 9460473
281 2912731395 2912723979 Bacteria 8557534
282 2912761270 2912757875 Bacteria 7940295
283 2918505183 2918501144 Bacteria 8668083
284 2919471898 2919468124 Bacteria 9133025
285 2935390835 2935390628 Bacteria 7043367
286 2946049513 2946045630 Bacteria 8527308
287 2946068199 2946064051 Bacteria 8957905
288 2946076314 2946072368 Bacteria 8999607
289 2947228723 2947224130 Bacteria 9938529
290 2954006789 2954002825 Bacteria 9173742
291 2954385809 2954380949 Bacteria 10050426
292 2954677346 2954673503 Bacteria 9685905
293 2954686806 2954682443 Bacteria 9862841
294 2954696455 2954691527 Bacteria 10720516
295 2954705823 2954701450 Bacteria 10834262
296 2954715811 2954711539 Bacteria 10867210
297 2954725748 2954721474 Bacteria 10456478
298 2954736052 2954731030 Bacteria 10243860
299 2954744705 2954740390 Bacteria 10229294
300 2954754912 2954749733 Bacteria 10366972
301 2954763669 2954759201 Bacteria 9358192
302 2966602077 2966598605 Bacteria 7676064
303 2990067677 2990059506 Bacteria 9321252
304 2990092997 2990088156 Bacteria 6657676
305 2995468134 2995463766 Bacteria 8577691
306 2997459085 2997451912 Bacteria 8492419
307 2997604716 2997600082 Bacteria 9896405
308 3003009340 3002998708 Bacteria 11715108
309 3006325686 3006321560 Bacteria 8247479
310 3006399622 3006393351 Bacteria 6615579
311 3006490218 3006486233 Bacteria 8157040
312 3006499375 3006493962 Bacteria 8825450
313 8008566850 8008558824 Bacteria 10610750
314 8008578537 8008574985 Bacteria 7815457
315 8023630482 8023623736 Bacteria 8593882
316 8025419859 8025413630 Bacteria 7014048
317 8025482586 8025478263 Bacteria 8209203
318 8033690524 8033684223 Bacteria 6906479
319 8047719417 8047710418 Bacteria 11023148
320 8048411495 8048406513 Bacteria 8936924
321 8054167386 8054160619 Bacteria 7783213
322 8056449908 8056447290 Bacteria 7680491
323 8056667416 8056667051 Bacteria 6953971
324 8056833295 8056829672 Bacteria 9045328
325 rootH1_10030739
326 rootH2_10082578
327 rootH1_10011733
328 rootH1_10011734
329 rootH1_10029491
330 JGI25160J50197_1004987
331 Ga0006562J51391_1125759
332 Ga0006562J51391_1125760
333 Ga0055532_1001288
334 Ga0055527_1000443
335 Ga0055527_1000445
336 Ga0055535_1001099
337 Ga0055535_1001101
338 Ga0055542_1001117
339 Ga0055529_1000252
340 Ga0055528_1001806
341 Ga0058692_1001314
342 Ga0070709_10020480
343 Ga0070714_100002227
344 Ga0070714_100046310
345 Ga0070713_100038159
346 Ga0070710_10000122
347 Ga0070711_100003698
348 Ga0070706_100009601
349 Ga0070698_100000546
350 Ga0070697_100031771
351 Ga0070717_10035707
352 Ga0070717_10039435
353 Ga0075363_100010183
354 Ga0070716_100002596
355 Ga0070712_100000686
356 Ga0075367_10000542
357 Ga0105240_10000363
358 Ga0105243_10072034
359 Ga0105246_10000694
360 Ga0182008_10002887
361 Ga0183367_1008
362 Ga0209672_100020
363 Ga0209672_100032
364 Ga0209147_100012
365 Ga0209147_100024
366 Ga0209147_100063
367 Ga0209258_100030
368 Ga0209258_100121
369 Ga0209148_1000022
370 Ga0209148_1000291
371 Ga0209455_1000024
372 Ga0209455_1000263
373 Ga0209673_1000056
374 Ga0207426_1000755
375 Ga0207426_1001873
376 Ga0207426_1008012
377 Ga0207692_10000172
378 Ga0207699_10020937
379 Ga0207695_10000328
380 Ga0207693_10001433
381 Ga0207663_10005046
382 Ga0207700_10000216
383 Ga0207664_10032616
384 Ga0207709_10041151
385 Ga0207665_10001519
386 Ga0207691_10084450
387 Ga0209371_1000076
388 Ga0209371_1012529
389 Ga0209813_10013922
390 Ga0307515_10002535
391 Ga0307515_10121271
392 Ga0268256_1000087
393 Ga0307511_10004454
394 Ga0307511_10045446
395 Ga0307512_10002787
396 Ga0307509_10003492
397 Ga0307509_10007593
398 Ga0307509_10022096
399 Ga0307508_10004181
400 Ga0307516_10037018
401 Ga0307518_10045139
402 Ga0307507_10027569
403 Ga0307507_10066573
404 Ga0307510_10004078
405 Ga0307510_10025021
406 Ga0395898_0002856
407 Ga0395901_0022394
408 Ga0436365_1266014
409 Ga0439436_0003350
410 Ga0439439_0000046
411 Ga0451853_0324200
412 Ga0451853_0546299
413 Ga0439433_0000559
414 Ga0439457_000147
415 Ga0439457_011294
416 Ga0439462_0000778
417 Ga0450894_000157
418 Ga0450903_000572
419 Ga0466972_0006302
420 Ga0466972_0008615
421 Ga0466972_0027378
422 Ga0466965_0000371
423 Ga0466966_0001648
424 Ga0466966_0006360
425 Ga0466961_0001402
426 Ga0466963_0003464
427 Ga0466963_0008214
428 Ga0466964_0001779
429 Ga0466957_0005272
430 Ga0466960_0002082
431 Ga0466959_0002895
432 Ga0466958_0062270
433 Ga0466967_0020023
434 Ga0495592_0006560
435 Ga0495592_0010791
436 Ga0495603_0000888
437 Ga0495603_0002200
438 Ga0495603_0005744
439 Ga0495603_0039732
440 Ga0495629_0001684
441 Ga0495629_0005176
442 Ga0495629_0007807
443 Ga0495629_0021386
444 Ga0495629_0022032
445 Ga0495629_0038897
446 Ga0495651_0002962
447 Ga0495582_0005756
448 Ga0495662_0003289
449 Ga0495662_0013172
450 Ga0495662_0017129
451 Ga0495662_0018561
452 Ga0495664_0000206
453 Ga0495594_0000748
454 Ga0495594_0020231
455 Ga0495606_0040332
456 Ga0495620_0001310
457 Ga0495620_0009868
458 Ga0495631_0005481
459 Ga0495648_0032266
460 Ga0495666_0022207
461 Ga0495652_0010525
462 Ga0495654_0020127
463 Ga0495640_0011191
464 Ga0495640_0021906
465 Ga0495587_0035127
466 Ga0495587_0035441
467 Ga0495609_0011151
468 Ga0495597_0004806
469 Ga0495645_0076057
470 Ga0495622_0006986
471 Ga0495668_0021152
472 Ga0495634_0006416
473 Ga0495634_0017967
474 Ga0495634_0065816
475 Ga0495611_0036456
476 Ga0495625_0027611
477 Ga0495635_0000427
478 Ga0495635_0008328
479 Ga0495588_0004993
480 Ga0495588_0026688
481 Ga0495657_0001293
482 Ga0495657_0015409
483 Ga0495646_0001489
484 Ga0495613_0000629
485 Ga0495613_0005092
486 Ga0495613_0019637
487 Ga0495613_0034694
488 Ga0495624_0042691
489 Ga0495649_0013738
490 Ga0495649_0040106
491 Ga0495589_0008715
492 Ga0495589_0028352
493 Ga0495600_0078867
494 Ga0495581_0013758
495 Ga0495581_0068997
496 Ga0495604_0000676
497 Ga0495604_0006734
498 Ga0495604_0044323
499 Ga0495636_0003835
500 Ga0495674_0120371
501 Ga0495672_0020786
502 Ga0495676_0001354
503 Ga0495676_0007900
504 Ga0495676_0034035
505 Ga0495680_0023507
506 Ga0495683_0015278
507 Ga0495683_0021645
508 Ga0495687_001793
509 Ga0495687_001814
510 Ga0495687_018085
511 Ga0495687_023606
512 Ga0495685_001943
513 Ga0495685_007093
514 Ga0495685_007780
515 Ga0495681_0030086
516 Ga0495602_0007604
517 Ga0495614_0000151
518 Ga0495614_0019760
519 Ga0495626_0010978
520 Ga0501031_0003300
521 Ga0501031_0028008
522 Ga0501032_0007776
523 Ga0501032_0037813
524 Ga0501033_0037591
525 Ga0501034_0028191
526 Ga0501034_0072684
527 Ga0501034_0149890
528 Ga0501036_0016132
529 Ga0501036_0024595
530 Ga0501037_0003251
531 Ga0501038_0002128
532 Ga0501040_0012044
533 Ga0501042_0000927
534 Ga0501043_0025569
535 Ga0501043_0037350
536 Ga0501046_0002925
537 Ga0501046_0009776
538 Ga0501046_0033247
539 Ga0501047_0000359
540 Ga0501047_0001120
541 Ga0501047_0028547
542 Ga0501047_0071109
543 Ga0501048_0001790
544 Ga0501069_0022715
545 Ga0501071_0006857
546 Ga0501076_0017609
547 Ga0501077_0088502
548 Ga0501080_0068381
549 Ga0501035_0011882
550 Ga0501035_0048644
551 Ga0501035_0074031
552 Ga0501044_0001371
553 Ga0501044_0091665
554 Ga0501044_0141414
555 Ga0500560_001768
556 Ga0500572_003637
557 Ga0466962_0006506
558 Ga0466962_0018313
559 Ga0530510_0096015
560 8025534400
561 2547406051
562 2554257554
563 2585298514
564 2585310827
565 2585314513
566 2616700321
567 2616904866
568 2643763109
569 2643900120
570 2643947867
571 2644262913
572 2644390695
573 2644405656
574 2644433732
575 2644443124
576 2644464021
577 2644627054
578 2784588995
579 2785342855
580 2785369947
581 2786671019
582 2804846389
583 2808842437
584 2808920953
585 2809232596
586 2811845780
587 2812357657
588 2812480178
589 2819697277
590 2852637264
591 2862178984
592 2862286044
593 2862290857
594 2862390494
595 2862578871
596 2863404157
597 2863412741
598 2867372523
599 2867434830
600 2867480926
601 2873155357
602 2875395209
603 2877680682
604 2912719398
605 2912731395
606 2912761270
607 2918505183
608 2919471898
609 2935390835
610 2946049513
611 2946068199
612 2946076314
613 2947228723
614 2954006789
615 2954385809
616 2954677346
617 2954686806
618 2954696455
619 2954705823
620 2954715811
621 2954725748
622 2954736052
623 2954744705
624 2954754912
625 2954763669
626 2966602077
627 2990067677
628 2990092997
629 2995468134
630 2997459085
631 2997604716
632 3003009340
633 3006325686
634 3006399622
635 3006490218
636 3006499375
637 8008566850
638 8008578537
639 8023630482
640 8025419859
641 8025482586
642 8033690524
643 8047719417
644 8048411495
645 8054167386
646 8056449908
647 8056667416
648 8056833295

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00106

adh_short

short chain dehydrogenase

371

565

0.97

PF00561

Abhydrolase_1

alpha/beta hydrolase fold

38

173

0.91

PF13561

adh_short_C2

Enoyl-(Acyl carrier protein) reductase

377

602

0.86

PF08659

KR

KR domain

371

544

0.81

PF12146

Hydrolase_4

Serine aminopeptidase, S33

34

204

0.8

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

373

546

0.68

PF12697

Abhydrolase_6

Alpha/beta hydrolase family

40

307

0.51

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gws-assembly1.cif.gz_C 4-hydroxyisoleucine dehydrogenase complexed with nadh and succinate 0.9413 338 463
5u4s-assembly1.cif.gz_A crystal structure of a short chain dehydrogenase from burkholderia cenocepacia j2315 in complex with nadp. 0.9112 335 543
5u4s-assembly1.cif.gz_B crystal structure of a short chain dehydrogenase from burkholderia cenocepacia j2315 in complex with nadp. 0.9031 338 546
8g9v-assembly4.cif.gz_G crystal structures of 17-beta-hydroxysteroid dehydrogenase 13 0.885 322 530
8sbv-assembly2.cif.gz_B crystal structure of 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase from klebsiella aerogenes (adp bound) 0.8806 336 526
ID Description Score Start End Superfamily
af_Q2QLP7_18_222_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.966 336 462 3.40.50.720
af_A0A1D6ED38_49_231_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9605 341 459 3.40.50.720
af_P9WGS3_322_571_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9529 323 526 3.40.50.720
af_F4J128_251_373_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9497 372 467 3.40.50.720
3ioyB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9261 322 523 3.40.50.720
ID Description Score Start End GO Terms
AF-D9XPY7-F1-model_v4 Oxidoreductase 0.9927 10 258
AF-D9XPY7-F1-model_v4 Oxidoreductase 0.9887 10 258
AF-A0A1C5E5A5-F1-model_v4 Alpha/beta hydrolase fold 0.9811 2 233 GO:0006508
GO:0008233
AF-A0A6G2UEW3-F1-model_v4 Alpha/beta fold hydrolase 0.9783 1 96 GO:0004301
AF-A0A6B3GNI5-F1-model_v4 Alpha/beta fold hydrolase 0.973 2 189 GO:0006508
GO:0008233

Map