F407528

General Info

Members Datasets Scaffolds Average Seq Length
324 189 648 232

Family's Representative Sequence

Representative Sequence 3300046690|Ga0495624_0265190|Ga0495624_0265190_99_890
Length 263
Sequence MGPFGPVAAPAGRSTIVLRDEITTARRTDMTEARAFSPQTPIRVFLLDDHEVVRRGVHDLLDAEPDIEVVGEAGTIDHALARGPALRPDVAILDVRLPDGDGITVCRELRSRMPELACLMLTSFDDDDALLDAIMAGAAGYVLKQIKGSDLIAAVRTVAAGQSMLDPATTTRLMSSLRGDDTPQEEPQDAVMASLTPREREILGLIGEGLTNRQIGQRLYLSEKTVKNHISRLLAKLGVERRIQAAVLATQAGPHTSSEPHPR

Samples

Sample ID Description Type Environment
1 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
2 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
6 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
7 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
8 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
9 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
10 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
11 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
12 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
13 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
14 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
20 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
21 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
22 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
23 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
24 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
25 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
26 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
27 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
28 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
29 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
30 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
31 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
32 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
33 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
34 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
35 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
36 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
37 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
38 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
39 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
40 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
41 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
42 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
43 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
44 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
45 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
46 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
47 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
48 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
49 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
50 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
51 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
52 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
53 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
54 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
55 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
56 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
57 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
58 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
59 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
60 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
61 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
62 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
63 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
64 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
65 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
66 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
67 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
68 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
69 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
70 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
71 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
72 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
73 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
74 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
75 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
76 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
77 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
78 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
79 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
80 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
81 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
82 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
83 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
84 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
85 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
86 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
87 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
88 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
89 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
90 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
92 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
105 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
106 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
107 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
108 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
109 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
113 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
114 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
115 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
116 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
119 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
120 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
121 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
122 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
123 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
124 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
125 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
126 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
127 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
128 3300053106 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 endosphere Metagenome Endosphere
129 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
130 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
131 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
132 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
133 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
134 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
135 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
136 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
137 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
138 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
139 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
140 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
141 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
142 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
143 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
144 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
145 3300053726 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 endosphere Metagenome Endosphere
146 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
147 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
148 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
149 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
150 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
151 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
152 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
153 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
154 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
155 2643221714 Streptomyces sp. Root264 Isolate Unclassified
156 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
157 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
158 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
159 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
160 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
161 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
162 2867428634 Streptomyces sp. RP5T Isolate Unclassified
163 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
164 2912757875 Streptomyces sp. S4.7 Isolate Rhizosphere
165 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
166 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
167 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
168 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
169 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
170 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
171 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
172 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
173 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
174 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
175 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
176 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
177 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
178 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
179 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
180 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
181 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
182 8033684223 Streptomyces phytophilus PIP175 Isolate Unclassified
183 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
184 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
185 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
186 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
187 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
188 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
189 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.19
Metatranscriptomes 0
Isolates 14.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.33
Nodule 0
Rhizoplane 1.54
Rhizosphere 76.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495624_0265190 3300046690 Bacteria 1037
2 Ga0070709_10037204 3300005434 Bacteria 2971
3 Ga0070709_10056708 3300005434 Bacteria 2478
4 Ga0070714_100001546 3300005435 Bacteria 16786
5 Ga0070714_100006797 3300005435 Bacteria 8867
6 Ga0070713_100040775 3300005436 Bacteria 3777
7 Ga0070713_100072967 3300005436 Bacteria 2904
8 Ga0070710_10140832 3300005437 Bacteria 1479
9 Ga0070712_100038827 3300006175 Bacteria 3256
10 Ga0075428_100548225 3300006844 Bacteria 1236
11 Ga0105243_10539859 3300009148 Bacteria 1112
12 Ga0157369_10194337 3300013105 Bacteria 2131
13 Ga0182008_10008344 3300014497 Bacteria 5659
14 Ga0213875_10012645 3300021388 Bacteria 4159
15 Ga0207692_10174370 3300025898 Bacteria 1248
16 Ga0207647_10179532 3300025904 Bacteria 1230
17 Ga0207699_10030497 3300025906 Bacteria 3019
18 Ga0207699_10049033 3300025906 Bacteria 2484
19 Ga0207693_10376628 3300025915 Bacteria 1110
20 Ga0207663_10267078 3300025916 Bacteria 1266
21 Ga0207700_10047964 3300025928 Bacteria 3169
22 Ga0207664_10032808 3300025929 Bacteria 3983
23 Ga0207664_10094356 3300025929 Bacteria 2459
24 Ga0307517_10004413 3300028786 Bacteria 21605
25 Ga0307517_10137843 3300028786 Bacteria 1727
26 Ga0307515_10000683 3300028794 Bacteria 78103
27 Ga0307511_10050822 3300030521 Bacteria 3333
28 Ga0265340_10015695 3300031247 Bacteria 3932
29 Ga0307509_10007125 3300031507 Bacteria 14738
30 Ga0307509_10046152 3300031507 Bacteria 4692
31 Ga0307509_10057345 3300031507 Bacteria 4129
32 Ga0307509_10192763 3300031507 Bacteria 1887
33 Ga0307508_10027079 3300031616 Bacteria 5192
34 Ga0307508_10127332 3300031616 Bacteria 2149
35 Ga0307508_10190450 3300031616 Bacteria 1653
36 Ga0307514_10042894 3300031649 Bacteria 3555
37 Ga0307514_10063604 3300031649 Bacteria 2801
38 Ga0307514_10312921 3300031649 Bacteria 869
39 Ga0307516_10058129 3300031730 Bacteria 3766
40 Ga0307516_10186300 3300031730 Bacteria 1805
41 Ga0307516_10402304 3300031730 Bacteria 1028
42 Ga0307518_10009488 3300031838 Bacteria 6943
43 Ga0307518_10237814 3300031838 Bacteria 1172
44 Ga0307507_10000005 3300033179 Bacteria 281494
45 Ga0307507_10000920 3300033179 Bacteria 65498
46 Ga0307507_10075115 3300033179 Bacteria 3026
47 Ga0307507_10092313 3300033179 Bacteria 2585
48 Ga0307510_10001830 3300033180 Bacteria 23821
49 Ga0395898_0001560 3300037466 Bacteria 31414
50 Ga0395898_0068810 3300037466 Bacteria 3426
51 Ga0436364_1016131 3300037853 Bacteria 4165
52 Ga0395901_0456059 3300038443 Bacteria 1307
53 Ga0451787_107997 3300041441 Bacteria 754
54 Ga0451802_0483138 3300041460 Bacteria 2865
55 Ga0451807_0075159 3300041486 Bacteria 789
56 Ga0451853_2195561 3300041512 Bacteria 1708
57 Ga0439448_0042090 3300042005 Bacteria 1480
58 Ga0439458_0059134 3300042157 Bacteria 955
59 Ga0466963_0007036 3300044694 Bacteria 6700
60 Ga0495592_0102288 3300046454 Bacteria 2040
61 Ga0495592_0117442 3300046454 Bacteria 1875
62 Ga0495603_0001735 3300046455 Bacteria 12847
63 Ga0495603_0004054 3300046455 Bacteria 8718
64 Ga0495603_0004353 3300046455 Bacteria 8447
65 Ga0495603_0005821 3300046455 Bacteria 7373
66 Ga0495603_0028704 3300046455 Bacteria 3356
67 Ga0495603_0091732 3300046455 Bacteria 1776
68 Ga0495629_0000767 3300046459 Bacteria 25905
69 Ga0495629_0002185 3300046459 Bacteria 15099
70 Ga0495629_0003011 3300046459 Bacteria 12823
71 Ga0495629_0003036 3300046459 Bacteria 12761
72 Ga0495629_0006463 3300046459 Bacteria 8680
73 Ga0495629_0148994 3300046459 Bacteria 1626
74 Ga0495638_0033815 3300046460 Bacteria 3267
75 Ga0495638_0144011 3300046460 Bacteria 1388
76 Ga0495651_0083723 3300046462 Bacteria 2404
77 Ga0495582_0051341 3300046473 Bacteria 2273
78 Ga0495662_0003992 3300046476 Bacteria 7434
79 Ga0495664_0028291 3300046477 Bacteria 3273
80 Ga0495664_0045726 3300046477 Bacteria 2597
81 Ga0495585_0072341 3300046492 Bacteria 1879
82 Ga0495585_0140737 3300046492 Bacteria 1264
83 Ga0495585_0246737 3300046492 Bacteria 892
84 Ga0495594_0006143 3300046499 Bacteria 6178
85 Ga0495594_0013539 3300046499 Bacteria 4260
86 Ga0495594_0037032 3300046499 Bacteria 2662
87 Ga0495594_0091147 3300046499 Bacteria 1708
88 Ga0495594_0229157 3300046499 Bacteria 1059
89 Ga0495583_0113870 3300046506 Bacteria 1144
90 Ga0495628_0044127 3300046516 Bacteria 3548
91 Ga0495628_0201250 3300046516 Bacteria 1500
92 Ga0495628_0215278 3300046516 Bacteria 1444
93 Ga0495628_0264323 3300046516 Bacteria 1281
94 Ga0495643_0009433 3300046522 Bacteria 6067
95 Ga0495652_0049939 3300046529 Bacteria 3579
96 Ga0495652_0175413 3300046529 Bacteria 1650
97 Ga0495652_0228556 3300046529 Bacteria 1393
98 Ga0495640_0025944 3300046533 Bacteria 4244
99 Ga0495586_0234752 3300046535 Bacteria 1044
100 Ga0495587_0008336 3300046536 Bacteria 6671
101 Ga0495645_0064570 3300046543 Bacteria 2649
102 Ga0495645_0193221 3300046543 Bacteria 1385
103 Ga0495622_0183331 3300046557 Bacteria 938
104 Ga0495633_0056393 3300046558 Bacteria 1846
105 Ga0495634_0011026 3300046642 Bacteria 6596
106 Ga0495634_0013683 3300046642 Bacteria 5858
107 Ga0495634_0062332 3300046642 Bacteria 2476
108 Ga0495611_0052736 3300046648 Bacteria 1835
109 Ga0495635_0011860 3300046663 Bacteria 6109
110 Ga0495635_0095815 3300046663 Bacteria 2028
111 Ga0495661_0095852 3300046665 Bacteria 1679
112 Ga0495588_0002047 3300046674 Bacteria 8622
113 Ga0495588_0006589 3300046674 Bacteria 5240
114 Ga0495588_0170197 3300046674 Bacteria 1152
115 Ga0495657_0006294 3300046675 Bacteria 9300
116 Ga0495657_0089373 3300046675 Bacteria 1979
117 Ga0495623_0132430 3300046679 Bacteria 1491
118 Ga0495623_0182391 3300046679 Bacteria 1218
119 Ga0495646_0002867 3300046680 Bacteria 10675
120 Ga0495658_0045672 3300046683 Bacteria 2459
121 Ga0495658_0135539 3300046683 Bacteria 1502
122 Ga0495613_0007182 3300046689 Bacteria 8296
123 Ga0495613_0008094 3300046689 Bacteria 7816
124 Ga0495613_0014185 3300046689 Bacteria 5912
125 Ga0495613_0043627 3300046689 Bacteria 3318
126 Ga0495613_0420423 3300046689 Bacteria 909
127 Ga0495670_0034828 3300046691 Bacteria 2509
128 Ga0495670_0370705 3300046691 Bacteria 772
129 Ga0495589_0005283 3300046794 Bacteria 6827
130 Ga0495600_0024862 3300046809 Bacteria 3855
131 Ga0495600_0039581 3300046809 Bacteria 3070
132 Ga0495600_0134450 3300046809 Bacteria 1606
133 Ga0495660_0026390 3300046810 Bacteria 3294
134 Ga0495581_0008383 3300047315 Bacteria 5991
135 Ga0495604_0023222 3300047317 Bacteria 4948
136 Ga0495604_0023525 3300047317 Bacteria 4915
137 Ga0495604_0068026 3300047317 Bacteria 2704
138 Ga0495604_0088181 3300047317 Bacteria 2308
139 Ga0495604_0455589 3300047317 Bacteria 835
140 Ga0495636_0064842 3300047318 Bacteria 1550
141 Ga0495636_0092200 3300047318 Bacteria 1316
142 Ga0495674_0473616 3300047319 Bacteria 1004
143 Ga0495676_0002748 3300047321 Bacteria 15785
144 Ga0495676_0004479 3300047321 Bacteria 12770
145 Ga0495676_0021591 3300047321 Bacteria 5618
146 Ga0495676_0022048 3300047321 Bacteria 5550
147 Ga0495676_0026741 3300047321 Bacteria 4961
148 Ga0495687_031285 3300047443 Bacteria 2442
149 Ga0495687_034182 3300047443 Bacteria 2299
150 Ga0495675_0013043 3300047444 Bacteria 5241
151 Ga0495675_0114755 3300047444 Bacteria 1680
152 Ga0495679_014896 3300047446 Bacteria 2863
153 Ga0495685_001542 3300047447 Bacteria 7069
154 Ga0495685_002942 3300047447 Bacteria 5387
155 Ga0495685_027192 3300047447 Bacteria 1967
156 Ga0495681_0035746 3300047470 Bacteria 2464
157 Ga0495686_0094629 3300047472 Bacteria 1810
158 Ga0495593_0011467 3300047673 Bacteria 5090
159 Ga0495593_0047487 3300047673 Bacteria 2283
160 Ga0495602_0069422 3300048088 Bacteria 3021
161 Ga0495602_0327936 3300048088 Bacteria 1111
162 Ga0495614_0000781 3300048089 Bacteria 13488
163 Ga0495614_0001840 3300048089 Bacteria 9288
164 Ga0495614_0006284 3300048089 Bacteria 5338
165 Ga0495614_0242491 3300048089 Bacteria 823
166 Ga0496104_0912689 3300048907 Bacteria 783
167 Ga0501031_0034197 3300049568 Bacteria 3317
168 Ga0501031_0038056 3300049568 Bacteria 3139
169 Ga0501031_0081650 3300049568 Bacteria 2107
170 Ga0501032_0002861 3300049569 Bacteria 13412
171 Ga0501032_0012744 3300049569 Bacteria 5995
172 Ga0501033_0000596 3300049570 Bacteria 33450
173 Ga0501033_0042677 3300049570 Bacteria 3380
174 Ga0501033_0114602 3300049570 Bacteria 1959
175 Ga0501033_0207065 3300049570 Bacteria 1399
176 Ga0501033_0366806 3300049570 Bacteria 1007
177 Ga0501034_0053971 3300049571 Bacteria 4046
178 Ga0501034_0251813 3300049571 Bacteria 1710
179 Ga0501036_0042944 3300049572 Bacteria 3827
180 Ga0501036_0079905 3300049572 Bacteria 2765
181 Ga0501036_0528315 3300049572 Bacteria 981
182 Ga0501036_0563094 3300049572 Bacteria 946
183 Ga0501037_0004810 3300049573 Bacteria 9816
184 Ga0501037_0020837 3300049573 Bacteria 4840
185 Ga0501037_0039977 3300049573 Bacteria 3452
186 Ga0501038_0000522 3300049574 Bacteria 33756
187 Ga0501038_0084561 3300049574 Bacteria 2669
188 Ga0501038_0088836 3300049574 Bacteria 2593
189 Ga0501038_0128465 3300049574 Bacteria 2083
190 Ga0501039_0048481 3300049575 Bacteria 3283
191 Ga0501039_0061495 3300049575 Bacteria 2909
192 Ga0501040_0043122 3300049576 Bacteria 3074
193 Ga0501041_0012270 3300049577 Bacteria 5076
194 Ga0501042_0029833 3300049578 Bacteria 3847
195 Ga0501042_0034966 3300049578 Bacteria 3565
196 Ga0501043_0001687 3300049579 Bacteria 19170
197 Ga0501043_0008755 3300049579 Bacteria 7967
198 Ga0501043_0022355 3300049579 Bacteria 4961
199 Ga0501043_0103476 3300049579 Bacteria 2237
200 Ga0501046_0055607 3300049580 Bacteria 3108
201 Ga0501046_0062183 3300049580 Bacteria 2918
202 Ga0501047_0003403 3300049581 Bacteria 15062
203 Ga0501047_0006403 3300049581 Bacteria 11076
204 Ga0501047_0148787 3300049581 Bacteria 2218
205 Ga0501047_0164242 3300049581 Bacteria 2091
206 Ga0501048_0002436 3300049582 Bacteria 14203
207 Ga0501048_0214890 3300049582 Bacteria 1363
208 Ga0501067_0019123 3300049583 Bacteria 3791
209 Ga0501068_0000368 3300049584 Bacteria 22682
210 Ga0501069_0035104 3300049585 Bacteria 2761
211 Ga0501070_0007256 3300049586 Bacteria 9409
212 Ga0501070_0190712 3300049586 Bacteria 1685
213 Ga0501070_0331794 3300049586 Bacteria 1236
214 Ga0501070_0469054 3300049586 Bacteria 1013
215 Ga0501071_0262890 3300049587 Bacteria 1304
216 Ga0501072_0016681 3300049588 Bacteria 5642
217 Ga0501072_0124241 3300049588 Bacteria 2056
218 Ga0501073_0022609 3300049589 Bacteria 4524
219 Ga0501074_0052028 3300049590 Bacteria 2956
220 Ga0501076_0038425 3300049592 Bacteria 3758
221 Ga0501077_0038765 3300049593 Bacteria 3035
222 Ga0501080_0154256 3300049742 Bacteria 2121
223 Ga0501083_0003761 3300049744 Bacteria 10649
224 Ga0501035_0012029 3300049822 Bacteria 8005
225 Ga0501035_0012245 3300049822 Bacteria 7929
226 Ga0501035_0028550 3300049822 Bacteria 5092
227 Ga0501035_0049014 3300049822 Bacteria 3786
228 Ga0501035_0063246 3300049822 Bacteria 3292
229 Ga0501035_0065304 3300049822 Bacteria 3232
230 Ga0501035_0148572 3300049822 Bacteria 2035
231 Ga0501035_0196644 3300049822 Bacteria 1731
232 Ga0501044_0002966 3300049823 Bacteria 19285
233 Ga0501044_0003243 3300049823 Bacteria 18291
234 Ga0501044_0022555 3300049823 Bacteria 6708
235 Ga0501044_0071771 3300049823 Bacteria 3520
236 Ga0501044_0102536 3300049823 Bacteria 2877
237 Ga0501044_0160461 3300049823 Bacteria 2225
238 Ga0501044_0257813 3300049823 Bacteria 1683
239 Ga0501045_0102908 3300049824 Bacteria 2114
240 Ga0501045_0119305 3300049824 Bacteria 1958
241 Ga0501045_0291379 3300049824 Bacteria 1214
242 nmdc:mga06z11_466_c1 3300050494 Bacteria 15075
243 Ga0495601_0023740 3300053077 Bacteria 3770
244 Ga0495601_0163337 3300053077 Bacteria 1455
245 Ga0495612_0021489 3300053078 Bacteria 2589
246 Ga0495612_0066169 3300053078 Bacteria 1502
247 Ga0495655_0018120 3300053083 Bacteria 1543
248 Ga0500578_0113280 3300053086 Bacteria 1708
249 Ga0500566_0083312 3300053094 Bacteria 1776
250 Ga0500640_035812 3300053095 Bacteria 2180
251 Ga0500654_048900 3300053099 Bacteria 2302
252 Ga0500553_071980 3300053101 Bacteria 1584
253 Ga0500558_092939 3300053106 Bacteria 1210
254 Ga0500560_008109 3300053107 Bacteria 2511
255 Ga0500569_018176 3300053109 Bacteria 1811
256 Ga0500572_010356 3300053111 Bacteria 2228
257 Ga0500608_097878 3300053122 Bacteria 1363
258 Ga0500652_021382 3300053131 Bacteria 2436
259 Ga0500658_0014716 3300053134 Bacteria 2897
260 Ga0500561_0002764 3300053137 Bacteria 2980
261 Ga0500573_0038697 3300053140 Bacteria 2756
262 Ga0500573_0138070 3300053140 Bacteria 1345
263 Ga0500573_0165723 3300053140 Bacteria 1199
264 Ga0500579_053965 3300053143 Bacteria 2437
265 Ga0500600_0063348 3300053149 Bacteria 2052
266 Ga0500603_111368 3300053150 Bacteria 822
267 Ga0500616_0004807 3300053153 Bacteria 9456
268 Ga0500624_003533 3300053157 Bacteria 2050
269 Ga0500633_0047996 3300053160 Bacteria 1462
270 Ga0500634_0059420 3300053161 Bacteria 2033
271 Ga0500637_0159443 3300053178 Bacteria 1301
272 Ga0500584_119060 3300053726 Bacteria 1051
273 Ga0500587_003044 3300053739 Bacteria 2372
274 Ga0501084_0004828 3300054114 Bacteria 11017
275 Ga0501082_0043460 3300060353 Bacteria 3874
276 Ga0466962_0042661 3300061719 Bacteria 2171
277 2554261288 2554235005 Bacteria 6457341
278 2585315180 2582581314 Bacteria 11452267
279 2585321464 2582581314 Bacteria 11452267
280 2616901029 2616644941 Bacteria 8510691
281 2643946845 2643221587 Bacteria 7586415
282 2644435026 2643221677 Bacteria 7584031
283 2644627880 2643221714 Bacteria 9015452
284 2785373519 2784746768 Bacteria 10036182
285 2793985296 2791355406 Bacteria 11364898
286 2808917652 2808606375 Bacteria 9466072
287 2811842499 2808606982 Bacteria 7791042
288 2862710849 2862705112 Bacteria 6563286
289 2867353164 2867346516 Bacteria 7608576
290 2867433259 2867428634 Bacteria 9590268
291 2875392059 2875391855 Bacteria 7600475
292 2912759600 2912757875 Bacteria 7940295
293 2912763450 2912757875 Bacteria 7940295
294 2918507921 2918501144 Bacteria 8668083
295 2935391286 2935390628 Bacteria 7043367
296 2935391513 2935390628 Bacteria 7043367
297 2935392994 2935390628 Bacteria 7043367
298 2954712670 2954711539 Bacteria 10867210
299 2954720134 2954711539 Bacteria 10867210
300 2954722628 2954721474 Bacteria 10456478
301 2954739234 2954731030 Bacteria 10243860
302 2954741506 2954740390 Bacteria 10229294
303 2954758061 2954749733 Bacteria 10366972
304 2954760520 2954759201 Bacteria 9358192
305 2990088989 2990088156 Bacteria 6657676
306 2997600782 2997600082 Bacteria 9896405
307 3006323450 3006321560 Bacteria 8247479
308 3006493295 3006486233 Bacteria 8157040
309 3006497650 3006493962 Bacteria 8825450
310 8008491051 8008485437 Bacteria 7198341
311 8025482990 8025478263 Bacteria 8209203
312 8025530380 8025524527 Bacteria 7197316
313 8025536867 8025530807 Bacteria 8495698
314 8033686461 8033684223 Bacteria 6906479
315 8033687701 8033684223 Bacteria 6906479
316 8033691356 8033684223 Bacteria 6906479
317 8047894366 8047893842 Bacteria 11723082
318 8048130357 8048127548 Bacteria 11053136
319 8048133185 8048127548 Bacteria 11053136
320 8048364686 8048356638 Bacteria 11044339
321 8048371383 8048369669 Bacteria 11666822
322 8048380184 8048379754 Bacteria 11877923
323 8056447401 8056447290 Bacteria 7680491
324 8056669527 8056667051 Bacteria 6953971
325 Ga0495624_0265190
326 Ga0070709_10037204
327 Ga0070709_10056708
328 Ga0070714_100001546
329 Ga0070714_100006797
330 Ga0070713_100040775
331 Ga0070713_100072967
332 Ga0070710_10140832
333 Ga0070712_100038827
334 Ga0075428_100548225
335 Ga0105243_10539859
336 Ga0157369_10194337
337 Ga0182008_10008344
338 Ga0213875_10012645
339 Ga0207692_10174370
340 Ga0207647_10179532
341 Ga0207699_10030497
342 Ga0207699_10049033
343 Ga0207693_10376628
344 Ga0207663_10267078
345 Ga0207700_10047964
346 Ga0207664_10032808
347 Ga0207664_10094356
348 Ga0307517_10004413
349 Ga0307517_10137843
350 Ga0307515_10000683
351 Ga0307511_10050822
352 Ga0265340_10015695
353 Ga0307509_10007125
354 Ga0307509_10046152
355 Ga0307509_10057345
356 Ga0307509_10192763
357 Ga0307508_10027079
358 Ga0307508_10127332
359 Ga0307508_10190450
360 Ga0307514_10042894
361 Ga0307514_10063604
362 Ga0307514_10312921
363 Ga0307516_10058129
364 Ga0307516_10186300
365 Ga0307516_10402304
366 Ga0307518_10009488
367 Ga0307518_10237814
368 Ga0307507_10000005
369 Ga0307507_10000920
370 Ga0307507_10075115
371 Ga0307507_10092313
372 Ga0307510_10001830
373 Ga0395898_0001560
374 Ga0395898_0068810
375 Ga0436364_1016131
376 Ga0395901_0456059
377 Ga0451787_107997
378 Ga0451802_0483138
379 Ga0451807_0075159
380 Ga0451853_2195561
381 Ga0439448_0042090
382 Ga0439458_0059134
383 Ga0466963_0007036
384 Ga0495592_0102288
385 Ga0495592_0117442
386 Ga0495603_0001735
387 Ga0495603_0004054
388 Ga0495603_0004353
389 Ga0495603_0005821
390 Ga0495603_0028704
391 Ga0495603_0091732
392 Ga0495629_0000767
393 Ga0495629_0002185
394 Ga0495629_0003011
395 Ga0495629_0003036
396 Ga0495629_0006463
397 Ga0495629_0148994
398 Ga0495638_0033815
399 Ga0495638_0144011
400 Ga0495651_0083723
401 Ga0495582_0051341
402 Ga0495662_0003992
403 Ga0495664_0028291
404 Ga0495664_0045726
405 Ga0495585_0072341
406 Ga0495585_0140737
407 Ga0495585_0246737
408 Ga0495594_0006143
409 Ga0495594_0013539
410 Ga0495594_0037032
411 Ga0495594_0091147
412 Ga0495594_0229157
413 Ga0495583_0113870
414 Ga0495628_0044127
415 Ga0495628_0201250
416 Ga0495628_0215278
417 Ga0495628_0264323
418 Ga0495643_0009433
419 Ga0495652_0049939
420 Ga0495652_0175413
421 Ga0495652_0228556
422 Ga0495640_0025944
423 Ga0495586_0234752
424 Ga0495587_0008336
425 Ga0495645_0064570
426 Ga0495645_0193221
427 Ga0495622_0183331
428 Ga0495633_0056393
429 Ga0495634_0011026
430 Ga0495634_0013683
431 Ga0495634_0062332
432 Ga0495611_0052736
433 Ga0495635_0011860
434 Ga0495635_0095815
435 Ga0495661_0095852
436 Ga0495588_0002047
437 Ga0495588_0006589
438 Ga0495588_0170197
439 Ga0495657_0006294
440 Ga0495657_0089373
441 Ga0495623_0132430
442 Ga0495623_0182391
443 Ga0495646_0002867
444 Ga0495658_0045672
445 Ga0495658_0135539
446 Ga0495613_0007182
447 Ga0495613_0008094
448 Ga0495613_0014185
449 Ga0495613_0043627
450 Ga0495613_0420423
451 Ga0495670_0034828
452 Ga0495670_0370705
453 Ga0495589_0005283
454 Ga0495600_0024862
455 Ga0495600_0039581
456 Ga0495600_0134450
457 Ga0495660_0026390
458 Ga0495581_0008383
459 Ga0495604_0023222
460 Ga0495604_0023525
461 Ga0495604_0068026
462 Ga0495604_0088181
463 Ga0495604_0455589
464 Ga0495636_0064842
465 Ga0495636_0092200
466 Ga0495674_0473616
467 Ga0495676_0002748
468 Ga0495676_0004479
469 Ga0495676_0021591
470 Ga0495676_0022048
471 Ga0495676_0026741
472 Ga0495687_031285
473 Ga0495687_034182
474 Ga0495675_0013043
475 Ga0495675_0114755
476 Ga0495679_014896
477 Ga0495685_001542
478 Ga0495685_002942
479 Ga0495685_027192
480 Ga0495681_0035746
481 Ga0495686_0094629
482 Ga0495593_0011467
483 Ga0495593_0047487
484 Ga0495602_0069422
485 Ga0495602_0327936
486 Ga0495614_0000781
487 Ga0495614_0001840
488 Ga0495614_0006284
489 Ga0495614_0242491
490 Ga0496104_0912689
491 Ga0501031_0034197
492 Ga0501031_0038056
493 Ga0501031_0081650
494 Ga0501032_0002861
495 Ga0501032_0012744
496 Ga0501033_0000596
497 Ga0501033_0042677
498 Ga0501033_0114602
499 Ga0501033_0207065
500 Ga0501033_0366806
501 Ga0501034_0053971
502 Ga0501034_0251813
503 Ga0501036_0042944
504 Ga0501036_0079905
505 Ga0501036_0528315
506 Ga0501036_0563094
507 Ga0501037_0004810
508 Ga0501037_0020837
509 Ga0501037_0039977
510 Ga0501038_0000522
511 Ga0501038_0084561
512 Ga0501038_0088836
513 Ga0501038_0128465
514 Ga0501039_0048481
515 Ga0501039_0061495
516 Ga0501040_0043122
517 Ga0501041_0012270
518 Ga0501042_0029833
519 Ga0501042_0034966
520 Ga0501043_0001687
521 Ga0501043_0008755
522 Ga0501043_0022355
523 Ga0501043_0103476
524 Ga0501046_0055607
525 Ga0501046_0062183
526 Ga0501047_0003403
527 Ga0501047_0006403
528 Ga0501047_0148787
529 Ga0501047_0164242
530 Ga0501048_0002436
531 Ga0501048_0214890
532 Ga0501067_0019123
533 Ga0501068_0000368
534 Ga0501069_0035104
535 Ga0501070_0007256
536 Ga0501070_0190712
537 Ga0501070_0331794
538 Ga0501070_0469054
539 Ga0501071_0262890
540 Ga0501072_0016681
541 Ga0501072_0124241
542 Ga0501073_0022609
543 Ga0501074_0052028
544 Ga0501076_0038425
545 Ga0501077_0038765
546 Ga0501080_0154256
547 Ga0501083_0003761
548 Ga0501035_0012029
549 Ga0501035_0012245
550 Ga0501035_0028550
551 Ga0501035_0049014
552 Ga0501035_0063246
553 Ga0501035_0065304
554 Ga0501035_0148572
555 Ga0501035_0196644
556 Ga0501044_0002966
557 Ga0501044_0003243
558 Ga0501044_0022555
559 Ga0501044_0071771
560 Ga0501044_0102536
561 Ga0501044_0160461
562 Ga0501044_0257813
563 Ga0501045_0102908
564 Ga0501045_0119305
565 Ga0501045_0291379
566 nmdc:mga06z11_466_c1
567 Ga0495601_0023740
568 Ga0495601_0163337
569 Ga0495612_0021489
570 Ga0495612_0066169
571 Ga0495655_0018120
572 Ga0500578_0113280
573 Ga0500566_0083312
574 Ga0500640_035812
575 Ga0500654_048900
576 Ga0500553_071980
577 Ga0500558_092939
578 Ga0500560_008109
579 Ga0500569_018176
580 Ga0500572_010356
581 Ga0500608_097878
582 Ga0500652_021382
583 Ga0500658_0014716
584 Ga0500561_0002764
585 Ga0500573_0038697
586 Ga0500573_0138070
587 Ga0500573_0165723
588 Ga0500579_053965
589 Ga0500600_0063348
590 Ga0500603_111368
591 Ga0500616_0004807
592 Ga0500624_003533
593 Ga0500633_0047996
594 Ga0500634_0059420
595 Ga0500637_0159443
596 Ga0500584_119060
597 Ga0500587_003044
598 Ga0501084_0004828
599 Ga0501082_0043460
600 Ga0466962_0042661
601 2554261288
602 2585315180
603 2585321464
604 2616901029
605 2643946845
606 2644435026
607 2644627880
608 2785373519
609 2793985296
610 2808917652
611 2811842499
612 2862710849
613 2867353164
614 2867433259
615 2875392059
616 2912759600
617 2912763450
618 2918507921
619 2935391286
620 2935391513
621 2935392994
622 2954712670
623 2954720134
624 2954722628
625 2954739234
626 2954741506
627 2954758061
628 2954760520
629 2990088989
630 2997600782
631 3006323450
632 3006493295
633 3006497650
634 8008491051
635 8025482990
636 8025530380
637 8025536867
638 8033686461
639 8033687701
640 8033691356
641 8047894366
642 8048130357
643 8048133185
644 8048364686
645 8048371383
646 8048380184
647 8056447401
648 8056669527

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

44

156

0.98

PF00196

GerE

Bacterial regulatory proteins, luxR family

193

249

0.98

PF04545

Sigma70_r4

Sigma-70, region 4

191

237

0.97

PF08281

Sigma70_r4_2

Sigma-70, region 4

189

237

0.95

PF13412

HTH_24

Winged helix-turn-helix DNA-binding

195

236

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zlj-assembly4.cif.gz_H crystal structure of the mycobacterium tuberculosis hypoxic response regulator dosr c-terminal domain 0.9839 164 228
1zlk-assembly1.cif.gz_B crystal structure of the mycobacterium tuberculosis hypoxic response regulator dosr c-terminal domain-dna complex 0.9726 165 228
1je8-assembly2.cif.gz_E two-component response regulator narl/dna complex: dna bending found in a high affinity site 0.9721 170 228
6ekh-assembly1.cif.gz_Y crystal structure of activated chey from methanoccocus maripaludis 0.9697 21 139
1qmp-assembly2.cif.gz_B phosphorylated aspartate in the crystal structure of the sporulation response regulator, spo0a 0.9624 23 141
ID Description Score Start End Superfamily
af_P06993_830_894_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9798 170 227 1.10.10.10
1zlkB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9726 165 228 1.10.10.10
6ekhY00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9697 21 139 3.40.50.2300
3p7nA02 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9629 165 228 1.10.10.10
1qmpB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9624 23 141 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A428X1Y9-F1-model_v4 DNA-binding response regulator 0.9932 23 159 GO:0000160
GO:0003677
AF-A0A428X1Y9-F1-model_v4 DNA-binding response regulator 0.972 23 159 GO:0000160
GO:0003677
AF-D3DBU1-F1-model_v4 Response regulator receiver protein 0.9544 22 172 GO:0000160
GO:0003677
AF-A0A397RJT3-F1-model_v4 deleted 0.9292 12 165
AF-A0A0F4J4H6-F1-model_v4 deleted 0.9082 13 172

Map