F406832

General Info

Members Datasets Scaffolds Average Seq Length
323 210 646 170

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100623237|Ga0070699_1006232372
Length 180
Sequence MSERTIRRGEAETEPVAQRSLLDRLIDEEPDKLRDPPLSSTESIAALRRSVRRDLEALLNTRRRWRSWPEGYTELGVSPLGYGISDFSAGAFSDPRRREWLRSDVEQTIRRFEPRLVRLRVTLIESKDELEARLHLRIEGLLRVEPAPEPIAFDTLVDAATAEILVKAGASEFARTPGDV

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
13 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
14 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
15 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
16 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
37 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
38 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
43 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
44 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
45 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
46 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
47 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
48 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
54 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
55 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
56 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
64 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
67 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
71 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
72 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
73 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
108 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
109 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
110 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
111 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
114 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
115 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
116 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
117 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
118 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
119 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
120 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
121 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
122 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
123 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
124 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
129 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
130 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
131 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
132 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
133 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
134 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
135 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
136 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
141 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
142 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
143 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
144 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
145 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
146 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
150 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
151 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
152 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
153 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
156 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
157 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
158 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
159 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
160 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
161 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
162 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
163 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
164 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
165 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
166 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
167 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
168 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
169 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
175 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
182 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
183 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
184 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
185 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
186 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
187 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
188 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
189 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
190 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
191 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
192 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
193 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
194 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
195 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
196 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
197 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
198 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
199 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
200 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
201 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
202 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
203 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
204 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
205 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
206 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
207 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
208 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
209 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
210 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.38
Metatranscriptomes 0
Isolates 0.62

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.36
Nodule 0
Rhizoplane 0.31
Rhizosphere 87.62
Stem 0
Stem Tuber 0
Unclassified 25.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100623237 3300005518 Bacteria 984
2 Ga0065715_10244987 3300005293 Unclassified 1186
3 Ga0070683_100022087 3300005329 Bacteria 5683
4 Ga0070683_100542701 3300005329 Bacteria 1112
5 Ga0070690_100705142 3300005330 Unclassified 775
6 Ga0070666_10067236 3300005335 Bacteria 2433
7 Ga0070680_100148660 3300005336 Bacteria 1967
8 Ga0070680_100399593 3300005336 Bacteria 1171
9 Ga0070680_100981220 3300005336 Unclassified 729
10 Ga0068868_100535507 3300005338 Unclassified 1030
11 Ga0070669_100621277 3300005353 Bacteria 907
12 Ga0070675_100247171 3300005354 Bacteria 1560
13 Ga0070688_100038062 3300005365 Unclassified 2935
14 Ga0070709_10042950 3300005434 Bacteria 2794
15 Ga0070714_100042257 3300005435 Bacteria 3850
16 Ga0070714_100453796 3300005435 Unclassified 1218
17 Ga0070713_100295967 3300005436 Bacteria 1489
18 Ga0070713_100401842 3300005436 Bacteria 1280
19 Ga0070710_10116893 3300005437 Bacteria 1609
20 Ga0070711_100078951 3300005439 Bacteria 2340
21 Ga0070711_100105285 3300005439 Bacteria 2060
22 Ga0070711_100116211 3300005439 Bacteria 1971
23 Ga0070708_100018492 3300005445 Bacteria 5833
24 Ga0070708_100080233 3300005445 Bacteria 2953
25 Ga0070708_101360937 3300005445 Bacteria 663
26 Ga0070681_10036454 3300005458 Bacteria 4939
27 Ga0070681_10461274 3300005458 Bacteria 1183
28 Ga0070681_10571370 3300005458 Bacteria 1044
29 Ga0070685_10074475 3300005466 Bacteria 2020
30 Ga0070706_100032977 3300005467 Bacteria 4778
31 Ga0070706_100189590 3300005467 Bacteria 1921
32 Ga0070706_100446121 3300005467 Bacteria 1204
33 Ga0070706_100872600 3300005467 Bacteria 832
34 Ga0070707_100025760 3300005468 Bacteria 5582
35 Ga0070707_100168255 3300005468 Bacteria 2136
36 Ga0070707_100904812 3300005468 Bacteria 847
37 Ga0070698_100002839 3300005471 Bacteria 19063
38 Ga0070698_100024358 3300005471 Bacteria 6316
39 Ga0070699_100102080 3300005518 Bacteria 2515
40 Ga0070679_100138884 3300005530 Bacteria 2411
41 Ga0070679_100995923 3300005530 Unclassified 782
42 Ga0070684_101111295 3300005535 Bacteria 743
43 Ga0070697_100007582 3300005536 Bacteria 8448
44 Ga0070697_100102422 3300005536 Bacteria 2379
45 Ga0070665_100120066 3300005548 Bacteria 2631
46 Ga0068855_101145275 3300005563 Bacteria 811
47 Ga0070664_100763843 3300005564 Bacteria 903
48 Ga0068857_100120676 3300005577 Unclassified 2360
49 Ga0068854_100662875 3300005578 Bacteria 897
50 Ga0068856_100156894 3300005614 Bacteria 2286
51 Ga0068856_100183537 3300005614 Unclassified 2106
52 Ga0070702_100242362 3300005615 Bacteria 1217
53 Ga0068859_100098412 3300005617 Plasmid 2979
54 Ga0068864_101197622 3300005618 Bacteria 758
55 Ga0068866_10593076 3300005718 Bacteria 747
56 Ga0068863_101266539 3300005841 Unclassified 744
57 Ga0068858_100713757 3300005842 Bacteria 976
58 Ga0068858_100849966 3300005842 Unclassified 891
59 Ga0068860_100377054 3300005843 Bacteria 1400
60 Ga0068860_100782192 3300005843 Bacteria 967
61 Ga0068862_100391843 3300005844 Bacteria 1298
62 Ga0068862_100793512 3300005844 Unclassified 924
63 Ga0081540_1034911 3300005983 Unclassified 2703
64 Ga0081540_1116615 3300005983 Unclassified 1117
65 Ga0081539_10004855 3300005985 Bacteria 14377
66 Ga0070717_10195727 3300006028 Unclassified 1768
67 Ga0070717_10352769 3300006028 Unclassified 1315
68 Ga0070717_10637390 3300006028 Bacteria 967
69 Ga0075365_10073818 3300006038 Bacteria 2300
70 Ga0075365_10096666 3300006038 Bacteria 2018
71 Ga0075368_10138314 3300006042 Bacteria 1014
72 Ga0075368_10149656 3300006042 Unclassified 975
73 Ga0075363_100099266 3300006048 Bacteria 1610
74 Ga0075363_100189830 3300006048 Bacteria 1172
75 Ga0075364_10166972 3300006051 Bacteria 1487
76 Ga0070712_100171849 3300006175 Bacteria 1682
77 Ga0070712_100226736 3300006175 Unclassified 1482
78 Ga0070712_100234781 3300006175 Bacteria 1458
79 Ga0070712_100584895 3300006175 Bacteria 943
80 Ga0070712_100915969 3300006175 Bacteria 756
81 Ga0075367_10246304 3300006178 Bacteria 1120
82 Ga0075367_10346941 3300006178 Unclassified 937
83 Ga0075369_10006814 3300006186 Bacteria 4336
84 Ga0075366_10138581 3300006195 Bacteria 1470
85 Ga0097621_100367732 3300006237 Bacteria 1282
86 Ga0075370_10060762 3300006353 Bacteria 2153
87 Ga0068871_100814798 3300006358 Unclassified 861
88 Ga0097620_100098412 3300006931 Plasmid 2979
89 Ga0075435_100651714 3300007076 Bacteria 914
90 Ga0099794_10090961 3300007265 Bacteria 1514
91 Ga0099795_10130391 3300007788 Bacteria 1014
92 Ga0105240_11756119 3300009093 Bacteria 647
93 Ga0111539_10215489 3300009094 Bacteria 2237
94 Ga0105242_10695321 3300009176 Bacteria 994
95 Ga0105237_10120337 3300009545 Bacteria 2620
96 Ga0105238_10931856 3300009551 Unclassified 888
97 Ga0105249_10284335 3300009553 Bacteria 1653
98 Ga0105249_11502817 3300009553 Bacteria 746
99 Ga0105035_110658 3300009988 Bacteria 808
100 Ga0099796_10113471 3300010159 Bacteria 1034
101 Ga0099796_10250696 3300010159 Bacteria 735
102 Ga0105239_10190381 3300010375 Bacteria 2296
103 Ga0105239_10755463 3300010375 Unclassified 1113
104 Ga0157370_10041562 3300013104 Bacteria 4434
105 Ga0157370_10699599 3300013104 Unclassified 925
106 Ga0157369_10651557 3300013105 Bacteria 1086
107 Ga0157369_11177282 3300013105 Unclassified 783
108 Ga0157369_12047873 3300013105 Bacteria 581
109 Ga0163163_11363907 3300014325 Bacteria 771
110 Ga0157380_10748494 3300014326 Bacteria 988
111 Ga0157376_10742161 3300014969 Bacteria 990
112 Ga0213875_10200973 3300021388 Bacteria 938
113 Ga0213871_10007714 3300021441 Bacteria 2342
114 Ga0207692_10250355 3300025898 Unclassified 1061
115 Ga0207680_10128566 3300025903 Bacteria 1667
116 Ga0207699_10057878 3300025906 Bacteria 2316
117 Ga0207684_10016313 3300025910 Bacteria 6378
118 Ga0207684_10257599 3300025910 Bacteria 1505
119 Ga0207684_10740711 3300025910 Bacteria 833
120 Ga0207707_10022788 3300025912 Bacteria 5476
121 Ga0207707_10061992 3300025912 Unclassified 3254
122 Ga0207693_10055411 3300025915 Bacteria 3111
123 Ga0207693_10060981 3300025915 Bacteria 2955
124 Ga0207663_10044400 3300025916 Bacteria 2728
125 Ga0207660_10172859 3300025917 Unclassified 1673
126 Ga0207652_10363560 3300025921 Unclassified 1306
127 Ga0207652_10851404 3300025921 Unclassified 807
128 Ga0207646_10022086 3300025922 Bacteria 5869
129 Ga0207646_10160966 3300025922 Bacteria 2025
130 Ga0207681_10591867 3300025923 Bacteria 916
131 Ga0207659_10155275 3300025926 Bacteria 1791
132 Ga0207700_10006601 3300025928 Bacteria 7027
133 Ga0207700_10055005 3300025928 Unclassified 2990
134 Ga0207700_10584142 3300025928 Bacteria 993
135 Ga0207664_10092192 3300025929 Bacteria 2486
136 Ga0207670_10158842 3300025936 Bacteria 1685
137 Ga0207711_10610425 3300025941 Bacteria 1018
138 Ga0207661_10308026 3300025944 Bacteria 1421
139 Ga0207679_10334701 3300025945 Bacteria 1315
140 Ga0207667_11285778 3300025949 Bacteria 708
141 Ga0207703_10984530 3300026035 Bacteria 809
142 Ga0207678_10324156 3300026067 Bacteria 1326
143 Ga0207702_11038894 3300026078 Unclassified 813
144 Ga0207648_10523141 3300026089 Bacteria 1087
145 Ga0207676_10178817 3300026095 Bacteria 1856
146 Ga0207674_10366959 3300026116 Unclassified 1392
147 Ga0209588_1063016 3300027671 Bacteria 1198
148 Ga0209813_10058289 3300027866 Unclassified 1227
149 Ga0268266_10117224 3300028379 Bacteria 2366
150 Ga0268264_10746863 3300028381 Unclassified 974
151 Ga0265334_10012106 3300028573 Bacteria 3626
152 Ga0265334_10154937 3300028573 Unclassified 807
153 Ga0265338_10125697 3300028800 Bacteria 2035
154 Ga0265338_10195815 3300028800 Bacteria 1528
155 Ga0307408_100211928 3300031548 Unclassified 1575
156 Ga0307406_10039395 3300031901 Bacteria 2932
157 Ga0307412_10263134 3300031911 Unclassified 1346
158 Ga0307415_100303438 3300032126 Unclassified 1324
159 Ga0373926_0269283 3300035083 Bacteria 662
160 Ga0373934_0235220 3300035086 Bacteria 756
161 Ga0373940_0166295 3300035088 Unclassified 711
162 Ga0373923_0065771 3300035111 Unclassified 1548
163 Ga0373923_0396931 3300035111 Unclassified 663
164 Ga0373936_0195022 3300035113 Bacteria 892
165 Ga0373939_0158305 3300035114 Unclassified 830
166 Ga0373945_0420219 3300035116 Unclassified 588
167 Ga0373953_0092109 3300035117 Bacteria 1268
168 Ga0373953_0136114 3300035117 Bacteria 1049
169 Ga0373954_0022438 3300035118 Bacteria 2863
170 Ga0373956_0318902 3300035119 Bacteria 740
171 Ga0373957_0154373 3300035120 Unclassified 943
172 Ga0373943_0079699 3300035170 Unclassified 1677
173 Ga0373943_0175955 3300035170 Unclassified 1173
174 Ga0373943_0204641 3300035170 Bacteria 1094
175 Ga0373955_0037041 3300035172 Unclassified 2592
176 Ga0373955_0116182 3300035172 Unclassified 1551
177 Ga0373955_0400571 3300035172 Unclassified 834
178 Ga0373924_0013868 3300035410 Bacteria 3035
179 Ga0373924_0014584 3300035410 Unclassified 2973
180 Ga0373935_0023517 3300035692 Bacteria 3787
181 Ga0373935_0064434 3300035692 Bacteria 2350
182 Ga0373935_0170853 3300035692 Bacteria 1487
183 Ga0373935_0377791 3300035692 Unclassified 1014
184 Ga0373935_0947700 3300035692 Unclassified 638
185 Ga0373927_0056431 3300035695 Bacteria 2539
186 Ga0373927_0207543 3300035695 Bacteria 1287
187 Ga0373927_0265038 3300035695 Unclassified 1130
188 Ga0373927_0765975 3300035695 Unclassified 638
189 Ga0373933_0007258 3300035724 Bacteria 6041
190 Ga0373933_0054198 3300035724 Bacteria 2403
191 Ga0373947_0022074 3300035725 Bacteria 3689
192 Ga0373947_0282640 3300035725 Unclassified 1103
193 Ga0373947_0430660 3300035725 Bacteria 892
194 Ga0373937_0008416 3300036401 Bacteria 8969
195 Ga0373937_0013204 3300036401 Bacteria 7273
196 Ga0373937_0013822 3300036401 Bacteria 7113
197 Ga0373937_0017239 3300036401 Bacteria 6429
198 Ga0373937_0395965 3300036401 Bacteria 1310
199 Ga0373937_0749692 3300036401 Bacteria 924
200 Ga0373925_0012988 3300037068 Bacteria 6030
201 Ga0373925_0061329 3300037068 Bacteria 2825
202 Ga0373925_0081986 3300037068 Unclassified 2454
203 Ga0373925_0114902 3300037068 Unclassified 2083
204 Ga0373925_0393273 3300037068 Bacteria 1130
205 Ga0373925_0459507 3300037068 Bacteria 1043
206 Ga0395900_0225640 3300037418 Bacteria 1886
207 Ga0395898_0037206 3300037466 Bacteria 4829
208 Ga0436364_0132222 3300037853 Bacteria 3506
209 Ga0436364_0308105 3300037853 Bacteria 1099
210 Ga0436364_0467663 3300037853 Bacteria 6023
211 Ga0436364_1325363 3300037853 Bacteria 2515
212 Ga0436365_0745096 3300039437 Bacteria 2281
213 Ga0436365_1154361 3300039437 Bacteria 11319
214 Ga0436365_1332217 3300039437 Bacteria 1130
215 Ga0436360_0313929 3300039438 Bacteria 808
216 Ga0436360_0483293 3300039438 Bacteria 14935
217 Ga0436360_0611086 3300039438 Bacteria 6580
218 Ga0436361_1040579 3300039447 Unclassified 656
219 Ga0436363_0187923 3300039450 Unclassified 1040
220 Ga0436363_1117453 3300039450 Bacteria 653
221 Ga0436363_1649884 3300039450 Unclassified 669
222 Ga0436362_0469109 3300039453 Unclassified 636
223 Ga0436362_0788388 3300039453 Bacteria 3912
224 Ga0436362_0882714 3300039453 Bacteria 1784
225 Ga0439461_0068330 3300041410 Bacteria 819
226 Ga0453683_0338599 3300044673 Unclassified 965
227 Ga0466963_0086255 3300044694 Bacteria 2133
228 Ga0451576_0004592 3300045051 Bacteria 17824
229 Ga0451576_0049221 3300045051 Bacteria 4423
230 Ga0451576_0231759 3300045051 Bacteria 1929
231 Ga0451576_1223611 3300045051 Unclassified 784
232 Ga0466967_0080215 3300045976 Bacteria 2944
233 Ga0495592_0074385 3300046454 Bacteria 2468
234 Ga0495592_0272088 3300046454 Bacteria 1111
235 Ga0495629_0498379 3300046459 Bacteria 821
236 Ga0495651_0359079 3300046462 Bacteria 961
237 Ga0495653_0739636 3300046463 Unclassified 595
238 Ga0495594_0271098 3300046499 Unclassified 967
239 Ga0495608_0112097 3300046511 Unclassified 1753
240 Ga0495608_0143657 3300046511 Bacteria 1522
241 Ga0495628_0049415 3300046516 Bacteria 3331
242 Ga0495630_0153729 3300046517 Bacteria 1751
243 Ga0495652_0290953 3300046529 Bacteria 1192
244 Ga0495652_0400200 3300046529 Unclassified 972
245 Ga0495640_0072157 3300046533 Bacteria 2314
246 Ga0495587_0061866 3300046536 Bacteria 2193
247 Ga0495645_0015415 3300046543 Bacteria 5436
248 Ga0495645_0164776 3300046543 Unclassified 1530
249 Ga0495667_0020960 3300046559 Bacteria 4410
250 Ga0495667_0021920 3300046559 Bacteria 4307
251 Ga0495635_0125238 3300046663 Bacteria 1752
252 Ga0495635_0522174 3300046663 Bacteria 780
253 Ga0495657_0031710 3300046675 Bacteria 3692
254 Ga0495623_0436428 3300046679 Bacteria 699
255 Ga0495646_0255564 3300046680 Bacteria 937
256 Ga0495669_0154548 3300046684 Bacteria 1087
257 Ga0495613_0957309 3300046689 Unclassified 552
258 Ga0495624_0153917 3300046690 Unclassified 1406
259 Ga0495600_0068115 3300046809 Bacteria 2326
260 Ga0495604_0050661 3300047317 Bacteria 3223
261 Ga0495604_0704055 3300047317 Unclassified 641
262 Ga0495674_0044039 3300047319 Bacteria 3969
263 Ga0495674_0883741 3300047319 Unclassified 691
264 Ga0495680_0163313 3300047322 Bacteria 1616
265 Ga0495684_0249575 3300047471 Bacteria 1292
266 Ga0495684_0629256 3300047471 Bacteria 720
267 Ga0495593_0253675 3300047673 Bacteria 881
268 Ga0495602_0002298 3300048088 Bacteria 19320
269 Ga0495602_0089374 3300048088 Bacteria 2561
270 Ga0495602_0341649 3300048088 Unclassified 1083
271 Ga0496112_0423968 3300048915 Bacteria 1269
272 Ga0501033_0003554 3300049570 Bacteria 12750
273 Ga0501034_0115862 3300049571 Bacteria 2668
274 Ga0501034_1142394 3300049571 Unclassified 659
275 Ga0501037_0108156 3300049573 Bacteria 2003
276 Ga0501038_0176924 3300049574 Bacteria 1724
277 Ga0501039_0083851 3300049575 Bacteria 2482
278 Ga0501040_0063165 3300049576 Bacteria 2548
279 Ga0501041_0076825 3300049577 Unclassified 2054
280 Ga0501042_0039498 3300049578 Bacteria 3354
281 Ga0501043_0116975 3300049579 Bacteria 2092
282 Ga0501046_0077278 3300049580 Bacteria 2578
283 Ga0501047_0459687 3300049581 Bacteria 1102
284 Ga0501048_0057234 3300049582 Bacteria 2765
285 Ga0501070_0294816 3300049586 Bacteria 1322
286 Ga0501071_0046977 3300049587 Bacteria 3101
287 Ga0501072_0042512 3300049588 Bacteria 3569
288 Ga0501072_0870330 3300049588 Bacteria 704
289 Ga0501073_0268550 3300049589 Bacteria 1177
290 Ga0501075_0029653 3300049591 Bacteria 4047
291 Ga0501076_0012848 3300049592 Bacteria 6265
292 Ga0501077_0009706 3300049593 Bacteria 5984
293 Ga0501079_0022350 3300049741 Bacteria 4849
294 Ga0501081_0017954 3300049743 Bacteria 4693
295 Ga0501044_0115417 3300049823 Bacteria 2691
296 Ga0501044_0909864 3300049823 Bacteria 754
297 nmdc:mga03n38_178834_c1 3300050490 Bacteria 1085
298 nmdc:mga03n38_198812_c1 3300050490 Bacteria 1036
299 nmdc:mga00v17_281639_c1 3300050491 Unclassified 1079
300 nmdc:mga0yw44_112727_c1 3300050492 Unclassified 1744
301 nmdc:mga0yw44_27409_c2 3300050492 Bacteria 2527
302 nmdc:mga0yw44_9700_c1 3300050492 Bacteria 4887
303 nmdc:mga0k408_263378_c1 3300050493 Bacteria 1029
304 nmdc:mga06z11_87742_c1 3300050494 Bacteria 1683
305 nmdc:mga04h51_69356_c1 3300050495 Unclassified 1227
306 nmdc:mga04h51_98388_c1 3300050495 Bacteria 1063
307 nmdc:mga07m45_13549_c1 3300050496 Bacteria 2659
308 nmdc:mga0sz30_236_c1 3300050516 Bacteria 21153
309 Ga0495601_0006161 3300053077 Bacteria 7000
310 Ga0495601_0348525 3300053077 Unclassified 963
311 Ga0495601_0406075 3300053077 Bacteria 883
312 Ga0495612_0008161 3300053078 Bacteria 4257
313 Ga0495595_0007978 3300053084 Bacteria 4336
314 Ga0495619_0042903 3300053085 Bacteria 2964
315 Ga0500651_0316731 3300053093 Bacteria 892
316 Ga0500566_0330636 3300053094 Bacteria 706
317 Ga0501084_0044555 3300054114 Bacteria 3714
318 Ga0590071_017143 3300059421 Unclassified 1700
319 Ga0501082_0147024 3300060353 Unclassified 2046
320 Ga0501082_0657940 3300060353 Unclassified 917
321 Ga0530510_0266827 3300061734 Bacteria 1277
322 2842780030 2842775625 Bacteria 5587290
323 2883577206 2883577096 Bacteria 4709178
324 Ga0070699_100623237
325 Ga0065715_10244987
326 Ga0070683_100022087
327 Ga0070683_100542701
328 Ga0070690_100705142
329 Ga0070666_10067236
330 Ga0070680_100148660
331 Ga0070680_100399593
332 Ga0070680_100981220
333 Ga0068868_100535507
334 Ga0070669_100621277
335 Ga0070675_100247171
336 Ga0070688_100038062
337 Ga0070709_10042950
338 Ga0070714_100042257
339 Ga0070714_100453796
340 Ga0070713_100295967
341 Ga0070713_100401842
342 Ga0070710_10116893
343 Ga0070711_100078951
344 Ga0070711_100105285
345 Ga0070711_100116211
346 Ga0070708_100018492
347 Ga0070708_100080233
348 Ga0070708_101360937
349 Ga0070681_10036454
350 Ga0070681_10461274
351 Ga0070681_10571370
352 Ga0070685_10074475
353 Ga0070706_100032977
354 Ga0070706_100189590
355 Ga0070706_100446121
356 Ga0070706_100872600
357 Ga0070707_100025760
358 Ga0070707_100168255
359 Ga0070707_100904812
360 Ga0070698_100002839
361 Ga0070698_100024358
362 Ga0070699_100102080
363 Ga0070679_100138884
364 Ga0070679_100995923
365 Ga0070684_101111295
366 Ga0070697_100007582
367 Ga0070697_100102422
368 Ga0070665_100120066
369 Ga0068855_101145275
370 Ga0070664_100763843
371 Ga0068857_100120676
372 Ga0068854_100662875
373 Ga0068856_100156894
374 Ga0068856_100183537
375 Ga0070702_100242362
376 Ga0068859_100098412
377 Ga0068864_101197622
378 Ga0068866_10593076
379 Ga0068863_101266539
380 Ga0068858_100713757
381 Ga0068858_100849966
382 Ga0068860_100377054
383 Ga0068860_100782192
384 Ga0068862_100391843
385 Ga0068862_100793512
386 Ga0081540_1034911
387 Ga0081540_1116615
388 Ga0081539_10004855
389 Ga0070717_10195727
390 Ga0070717_10352769
391 Ga0070717_10637390
392 Ga0075365_10073818
393 Ga0075365_10096666
394 Ga0075368_10138314
395 Ga0075368_10149656
396 Ga0075363_100099266
397 Ga0075363_100189830
398 Ga0075364_10166972
399 Ga0070712_100171849
400 Ga0070712_100226736
401 Ga0070712_100234781
402 Ga0070712_100584895
403 Ga0070712_100915969
404 Ga0075367_10246304
405 Ga0075367_10346941
406 Ga0075369_10006814
407 Ga0075366_10138581
408 Ga0097621_100367732
409 Ga0075370_10060762
410 Ga0068871_100814798
411 Ga0097620_100098412
412 Ga0075435_100651714
413 Ga0099794_10090961
414 Ga0099795_10130391
415 Ga0105240_11756119
416 Ga0111539_10215489
417 Ga0105242_10695321
418 Ga0105237_10120337
419 Ga0105238_10931856
420 Ga0105249_10284335
421 Ga0105249_11502817
422 Ga0105035_110658
423 Ga0099796_10113471
424 Ga0099796_10250696
425 Ga0105239_10190381
426 Ga0105239_10755463
427 Ga0157370_10041562
428 Ga0157370_10699599
429 Ga0157369_10651557
430 Ga0157369_11177282
431 Ga0157369_12047873
432 Ga0163163_11363907
433 Ga0157380_10748494
434 Ga0157376_10742161
435 Ga0213875_10200973
436 Ga0213871_10007714
437 Ga0207692_10250355
438 Ga0207680_10128566
439 Ga0207699_10057878
440 Ga0207684_10016313
441 Ga0207684_10257599
442 Ga0207684_10740711
443 Ga0207707_10022788
444 Ga0207707_10061992
445 Ga0207693_10055411
446 Ga0207693_10060981
447 Ga0207663_10044400
448 Ga0207660_10172859
449 Ga0207652_10363560
450 Ga0207652_10851404
451 Ga0207646_10022086
452 Ga0207646_10160966
453 Ga0207681_10591867
454 Ga0207659_10155275
455 Ga0207700_10006601
456 Ga0207700_10055005
457 Ga0207700_10584142
458 Ga0207664_10092192
459 Ga0207670_10158842
460 Ga0207711_10610425
461 Ga0207661_10308026
462 Ga0207679_10334701
463 Ga0207667_11285778
464 Ga0207703_10984530
465 Ga0207678_10324156
466 Ga0207702_11038894
467 Ga0207648_10523141
468 Ga0207676_10178817
469 Ga0207674_10366959
470 Ga0209588_1063016
471 Ga0209813_10058289
472 Ga0268266_10117224
473 Ga0268264_10746863
474 Ga0265334_10012106
475 Ga0265334_10154937
476 Ga0265338_10125697
477 Ga0265338_10195815
478 Ga0307408_100211928
479 Ga0307406_10039395
480 Ga0307412_10263134
481 Ga0307415_100303438
482 Ga0373926_0269283
483 Ga0373934_0235220
484 Ga0373940_0166295
485 Ga0373923_0065771
486 Ga0373923_0396931
487 Ga0373936_0195022
488 Ga0373939_0158305
489 Ga0373945_0420219
490 Ga0373953_0092109
491 Ga0373953_0136114
492 Ga0373954_0022438
493 Ga0373956_0318902
494 Ga0373957_0154373
495 Ga0373943_0079699
496 Ga0373943_0175955
497 Ga0373943_0204641
498 Ga0373955_0037041
499 Ga0373955_0116182
500 Ga0373955_0400571
501 Ga0373924_0013868
502 Ga0373924_0014584
503 Ga0373935_0023517
504 Ga0373935_0064434
505 Ga0373935_0170853
506 Ga0373935_0377791
507 Ga0373935_0947700
508 Ga0373927_0056431
509 Ga0373927_0207543
510 Ga0373927_0265038
511 Ga0373927_0765975
512 Ga0373933_0007258
513 Ga0373933_0054198
514 Ga0373947_0022074
515 Ga0373947_0282640
516 Ga0373947_0430660
517 Ga0373937_0008416
518 Ga0373937_0013204
519 Ga0373937_0013822
520 Ga0373937_0017239
521 Ga0373937_0395965
522 Ga0373937_0749692
523 Ga0373925_0012988
524 Ga0373925_0061329
525 Ga0373925_0081986
526 Ga0373925_0114902
527 Ga0373925_0393273
528 Ga0373925_0459507
529 Ga0395900_0225640
530 Ga0395898_0037206
531 Ga0436364_0132222
532 Ga0436364_0308105
533 Ga0436364_0467663
534 Ga0436364_1325363
535 Ga0436365_0745096
536 Ga0436365_1154361
537 Ga0436365_1332217
538 Ga0436360_0313929
539 Ga0436360_0483293
540 Ga0436360_0611086
541 Ga0436361_1040579
542 Ga0436363_0187923
543 Ga0436363_1117453
544 Ga0436363_1649884
545 Ga0436362_0469109
546 Ga0436362_0788388
547 Ga0436362_0882714
548 Ga0439461_0068330
549 Ga0453683_0338599
550 Ga0466963_0086255
551 Ga0451576_0004592
552 Ga0451576_0049221
553 Ga0451576_0231759
554 Ga0451576_1223611
555 Ga0466967_0080215
556 Ga0495592_0074385
557 Ga0495592_0272088
558 Ga0495629_0498379
559 Ga0495651_0359079
560 Ga0495653_0739636
561 Ga0495594_0271098
562 Ga0495608_0112097
563 Ga0495608_0143657
564 Ga0495628_0049415
565 Ga0495630_0153729
566 Ga0495652_0290953
567 Ga0495652_0400200
568 Ga0495640_0072157
569 Ga0495587_0061866
570 Ga0495645_0015415
571 Ga0495645_0164776
572 Ga0495667_0020960
573 Ga0495667_0021920
574 Ga0495635_0125238
575 Ga0495635_0522174
576 Ga0495657_0031710
577 Ga0495623_0436428
578 Ga0495646_0255564
579 Ga0495669_0154548
580 Ga0495613_0957309
581 Ga0495624_0153917
582 Ga0495600_0068115
583 Ga0495604_0050661
584 Ga0495604_0704055
585 Ga0495674_0044039
586 Ga0495674_0883741
587 Ga0495680_0163313
588 Ga0495684_0249575
589 Ga0495684_0629256
590 Ga0495593_0253675
591 Ga0495602_0002298
592 Ga0495602_0089374
593 Ga0495602_0341649
594 Ga0496112_0423968
595 Ga0501033_0003554
596 Ga0501034_0115862
597 Ga0501034_1142394
598 Ga0501037_0108156
599 Ga0501038_0176924
600 Ga0501039_0083851
601 Ga0501040_0063165
602 Ga0501041_0076825
603 Ga0501042_0039498
604 Ga0501043_0116975
605 Ga0501046_0077278
606 Ga0501047_0459687
607 Ga0501048_0057234
608 Ga0501070_0294816
609 Ga0501071_0046977
610 Ga0501072_0042512
611 Ga0501072_0870330
612 Ga0501073_0268550
613 Ga0501075_0029653
614 Ga0501076_0012848
615 Ga0501077_0009706
616 Ga0501079_0022350
617 Ga0501081_0017954
618 Ga0501044_0115417
619 Ga0501044_0909864
620 nmdc:mga03n38_178834_c1
621 nmdc:mga03n38_198812_c1
622 nmdc:mga00v17_281639_c1
623 nmdc:mga0yw44_112727_c1
624 nmdc:mga0yw44_27409_c2
625 nmdc:mga0yw44_9700_c1
626 nmdc:mga0k408_263378_c1
627 nmdc:mga06z11_87742_c1
628 nmdc:mga04h51_69356_c1
629 nmdc:mga04h51_98388_c1
630 nmdc:mga07m45_13549_c1
631 nmdc:mga0sz30_236_c1
632 Ga0495601_0006161
633 Ga0495601_0348525
634 Ga0495601_0406075
635 Ga0495612_0008161
636 Ga0495595_0007978
637 Ga0495619_0042903
638 Ga0500651_0316731
639 Ga0500566_0330636
640 Ga0501084_0044555
641 Ga0590071_017143
642 Ga0501082_0147024
643 Ga0501082_0657940
644 Ga0530510_0266827
645 2842780030
646 2883577206

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04965

GPW_gp25

Baseplate wedge protein gp25

45

147

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6g90-assembly1.cif.gz_P prespliceosome structure provides insight into spliceosome assembly and regulation (map a2) 0.7192 113 161
8j1c-assembly2.cif.gz_C structure of amino acid dehydrogenase in complex with nadp 0.6848 113 161
2ia7-assembly1.cif.gz_A crystal structure of putative tail lysozyme (np_952040.1) from geobacter sulfurreducens at 1.44 a resolution 0.684 40 147
6od1-assembly1.cif.gz_B irad-bound to rssb d58p variant 0.6829 39 160
5mqs-assembly1.cif.gz_A sialidase bt_1020 0.6801 113 157
ID Description Score Start End Superfamily
af_A0A1D6KMJ3_66_168_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8314 126 149 2.60.40.10
af_Q9FVU4_49_288_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.7982 107 157 2.120.10.80
af_A0A1D8PTX0_296_604_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.7943 110 161 2.130.10.10
af_A0A0B4KG77_26_190_2.40.128.20 Mainly Beta;Beta Barrel;Lipocalin;Calycin beta-barrel core domain 0.7799 108 156 2.40.128.20
af_A0A2R8QC39_246_545_2.120.10.80 Mainly Beta;6 Propeller;Neuraminidase;Kelch-type beta propeller 0.7735 126 163 2.120.10.80
ID Description Score Start End GO Terms
AF-A0A7Y0SFJ7-F1-model_v4 Type VI secretion system baseplate subunit TssE 0.9508 35 109
AF-D8PEP7-F1-model_v4 IraD/Gp25-like domain-containing protein 0.9359 37 163
AF-A0A239RY48-F1-model_v4 Type VI secretion system lysozyme-like protein 0.9272 38 163
AF-A0A6B3Q737-F1-model_v4 deleted 0.9213 36 163
AF-A0A7Y7I0X1-F1-model_v4 Type VI secretion system protein ImpF 0.913 24 163

Map