F406726

General Info

Members Datasets Scaffolds Average Seq Length
323 181 323 271

Family's Representative Sequence

Representative Sequence 3300002244|JGI24742J22300_10000069|JGI24742J22300_1000006915
Length 290
Sequence MALPKAINDRSDAMVLEQQRRLFQETVWEYYRKQARQGLPWRRAEADGSFDPYKIMVSEIMLQQTQVSRVAPKFAAFLREFPTAQALASAPLAAVLVAWSGLGYNRRAKFLWQAAQAIVTQYHGRMPRTVTELKALPGIGVHTAGAILAYAYNEPVVFIETNIRTVFIHHFFADETEPVPDGALVALVSQTLDHEHPREWYWALMDYGVHLKQTVGNVSRRSKSYTKQSAFKGSLRQIRGAVIRELAGGARTETYLHKHVQDDRLEAVLADLIKENLIEKHKNSYHLANT

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
4 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
10 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
14 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
15 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
16 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
17 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
25 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
26 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
33 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
34 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
35 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
42 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
43 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
44 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
46 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
47 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
57 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300012503 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R Metagenome Rhizosphere
61 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
62 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
63 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
64 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
65 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
66 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
67 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
68 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
69 3300013874 Rhizosphere microbial communities from switchgrass harvested rhizosphere in Austin, TX, USA - RS_213 Metagenome Rhizosphere
70 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
71 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
108 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
109 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
110 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
111 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
112 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
113 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
114 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
115 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
116 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
122 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
123 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
128 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
129 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
130 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
131 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
132 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
143 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
147 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049773 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_B_4_control Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
155 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
156 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
157 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
158 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
159 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
160 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
161 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
162 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
163 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
164 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
165 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
166 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
167 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
168 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
169 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
170 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
171 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
172 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
173 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
176 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
177 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
178 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
179 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
180 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
181 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.07
Nodule 0
Rhizoplane 0.62
Rhizosphere 85.45
Stem 0
Stem Tuber 0
Unclassified 1.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10000155 3300001979 Bacteria 26890
2 JGI24740J21852_10010916 3300001979 Bacteria 3473
3 JGI24740J21852_10035476 3300001979 Bacteria 1559
4 JGI24737J22298_10000065 3300001990 Bacteria 31150
5 JGI24735J21928_10000023 3300002067 Bacteria 96124
6 JGI24742J22300_10000069 3300002244 Bacteria 15066
7 rootH2_10261705 3300003320 Bacteria 1783
8 rootL2_10124187 3300003322 Bacteria 1712
9 rootL2_10352907 3300003322 Unclassified 1975
10 rootH1_10394259 3300003323 Bacteria 1546
11 Ga0070658_10000009 3300005327 Bacteria 319868
12 Ga0070658_10000023 3300005327 Bacteria 185522
13 Ga0070658_10000051 3300005327 Bacteria 118657
14 Ga0070658_10003191 3300005327 Bacteria 13534
15 Ga0070658_10004932 3300005327 Bacteria 10877
16 Ga0070658_10008384 3300005327 Bacteria 8309
17 Ga0070658_10013691 3300005327 Bacteria 6507
18 Ga0070658_10022208 3300005327 Bacteria 5092
19 Ga0070658_10053261 3300005327 Bacteria 3283
20 Ga0070676_10003599 3300005328 Bacteria 8098
21 Ga0070683_100000120 3300005329 Bacteria 51000
22 Ga0070683_100036756 3300005329 Unclassified 4482
23 Ga0070666_10012015 3300005335 Bacteria 5450
24 Ga0070666_10216351 3300005335 Bacteria 1350
25 Ga0070680_100003603 3300005336 Bacteria 11562
26 Ga0070680_100176016 3300005336 Unclassified 1801
27 Ga0070680_100186526 3300005336 Bacteria 1747
28 Ga0070680_100186606 3300005336 Bacteria 1747
29 Ga0070682_100125160 3300005337 Unclassified 1731
30 Ga0070660_100011870 3300005339 Bacteria 6209
31 Ga0070660_100202485 3300005339 Bacteria 1610
32 Ga0070691_10004152 3300005341 Bacteria 6574
33 Ga0070661_100038209 3300005344 Bacteria 3494
34 Ga0070671_100039691 3300005355 Bacteria 3908
35 Ga0070671_100388998 3300005355 Unclassified 1192
36 Ga0070674_100006019 3300005356 Bacteria 7049
37 Ga0070673_100000407 3300005364 Bacteria 22729
38 Ga0070659_100138248 3300005366 Bacteria 1982
39 Ga0070667_100004042 3300005367 Bacteria 12402
40 Ga0070667_100059727 3300005367 Bacteria 3226
41 Ga0070663_100066059 3300005455 Unclassified 2620
42 Ga0070663_100087146 3300005455 Unclassified 2307
43 Ga0070678_100009157 3300005456 Bacteria 5980
44 Ga0070678_100035630 3300005456 Bacteria 3477
45 Ga0070662_100003065 3300005457 Bacteria 10376
46 Ga0070681_10298422 3300005458 Bacteria 1521
47 Ga0070681_10642269 3300005458 Bacteria 976
48 Ga0070685_10000373 3300005466 Bacteria 27155
49 Ga0070685_10003633 3300005466 Bacteria 7828
50 Ga0070679_100000522 3300005530 Bacteria 32678
51 Ga0070679_100002032 3300005530 Bacteria 18163
52 Ga0070679_100071058 3300005530 Bacteria 3471
53 Ga0070684_100008029 3300005535 Bacteria 8238
54 Ga0070684_100057288 3300005535 Bacteria 3402
55 Ga0070665_100098998 3300005548 Bacteria 2920
56 Ga0070665_100294227 3300005548 Bacteria 1626
57 Ga0068855_100001617 3300005563 Bacteria 28278
58 Ga0068855_100077879 3300005563 Bacteria 3847
59 Ga0068855_100081601 3300005563 Unclassified 3748
60 Ga0070664_100000188 3300005564 Bacteria 43726
61 Ga0068857_100000147 3300005577 Bacteria 43506
62 Ga0068857_100065711 3300005577 Bacteria 3226
63 Ga0068856_100000344 3300005614 Bacteria 50628
64 Ga0068856_100000404 3300005614 Bacteria 47354
65 Ga0068856_100003098 3300005614 Bacteria 16971
66 Ga0068856_100064332 3300005614 Bacteria 3624
67 Ga0068856_100193277 3300005614 Bacteria 2049
68 Ga0068852_100000011 3300005616 Bacteria 141147
69 Ga0068852_100183905 3300005616 Unclassified 1967
70 Ga0068859_100076183 3300005617 Unclassified 3395
71 Ga0068859_100188375 3300005617 Bacteria 2147
72 Ga0068863_100010248 3300005841 Bacteria 9110
73 Ga0068863_100243477 3300005841 Bacteria 1736
74 Ga0068858_100237882 3300005842 Bacteria 1727
75 Ga0068860_100018295 3300005843 Bacteria 6819
76 Ga0075365_10041203 3300006038 Bacteria 3016
77 Ga0075364_10023988 3300006051 Unclassified 3868
78 Ga0075367_10000009 3300006178 Bacteria 43647
79 Ga0075367_10101349 3300006178 Bacteria 1760
80 Ga0075369_10037838 3300006186 Unclassified 2056
81 Ga0075366_10005872 3300006195 Bacteria 6675
82 Ga0075366_10240569 3300006195 Bacteria 1103
83 Ga0097621_100063329 3300006237 Bacteria 3039
84 Ga0097621_100177874 3300006237 Bacteria 1837
85 Ga0068871_100527196 3300006358 Bacteria 1067
86 Ga0075430_100262809 3300006846 Bacteria 1429
87 Ga0068865_100000604 3300006881 Bacteria 20136
88 Ga0068865_100016391 3300006881 Bacteria 4742
89 Ga0097620_100076185 3300006931 Unclassified 3395
90 Ga0097620_100188379 3300006931 Bacteria 2147
91 Ga0105240_10000003 3300009093 Bacteria 1183681
92 Ga0105240_10006120 3300009093 Bacteria 17752
93 Ga0105240_10027733 3300009093 Bacteria 7411
94 Ga0105245_10000001 3300009098 Bacteria 939270
95 Ga0105245_10000094 3300009098 Bacteria 85857
96 Ga0105245_10001082 3300009098 Bacteria 24692
97 Ga0105245_10019076 3300009098 Bacteria 6003
98 Ga0105245_10050947 3300009098 Bacteria 3712
99 Ga0105247_10257999 3300009101 Unclassified 1194
100 Ga0105243_10000001 3300009148 Bacteria 1156578
101 Ga0105243_10026522 3300009148 Unclassified 4436
102 Ga0105241_10019670 3300009174 Bacteria 4983
103 Ga0105241_10050114 3300009174 Bacteria 3181
104 Ga0105241_10510683 3300009174 Bacteria 1073
105 Ga0105242_10000001 3300009176 Bacteria 574039
106 Ga0105242_10040309 3300009176 Unclassified 3764
107 Ga0105242_10062773 3300009176 Bacteria 3058
108 Ga0105248_10171961 3300009177 Bacteria 2442
109 Ga0105238_10080108 3300009551 Bacteria 3255
110 Ga0105030_104567 3300009987 Unclassified 1170
111 Ga0105239_10000599 3300010375 Bacteria 51463
112 Ga0105239_10017074 3300010375 Bacteria 8023
113 Ga0105239_10028536 3300010375 Bacteria 6136
114 Ga0105246_10001837 3300011119 Bacteria 12733
115 Ga0105246_10002106 3300011119 Bacteria 12002
116 Ga0105246_10007356 3300011119 Bacteria 6748
117 Ga0105246_10018585 3300011119 Bacteria 4432
118 Ga0157313_1001538 3300012503 Bacteria 1260
119 Ga0157373_10000059 3300013100 Bacteria 95794
120 Ga0157373_10000422 3300013100 Bacteria 33946
121 Ga0157373_10001078 3300013100 Bacteria 21001
122 Ga0157373_10015412 3300013100 Bacteria 5588
123 Ga0157371_10011749 3300013102 Bacteria 6728
124 Ga0157371_10038906 3300013102 Bacteria 3402
125 Ga0157370_10000167 3300013104 Bacteria 81012
126 Ga0157370_10006030 3300013104 Bacteria 13474
127 Ga0157369_10000026 3300013105 Bacteria 216023
128 Ga0157369_10001342 3300013105 Bacteria 30380
129 Ga0157369_10752159 3300013105 Unclassified 1003
130 Ga0157374_10000056 3300013296 Bacteria 117163
131 Ga0157374_10000811 3300013296 Bacteria 27394
132 Ga0157374_10006925 3300013296 Bacteria 9640
133 Ga0157374_10052509 3300013296 Bacteria 3797
134 Ga0157378_10031335 3300013297 Unclassified 4698
135 Ga0163162_10545788 3300013306 Bacteria 1288
136 Ga0157372_10060415 3300013307 Bacteria 4241
137 Ga0157372_10122923 3300013307 Unclassified 2983
138 Ga0157372_10416216 3300013307 Bacteria 1566
139 Ga0157514_100248 3300013874 Unclassified 1041
140 Ga0163163_10109897 3300014325 Bacteria 2785
141 Ga0163163_10131724 3300014325 Unclassified 2541
142 Ga0163163_10314589 3300014325 Bacteria 1619
143 Ga0157377_10024740 3300014745 Unclassified 3194
144 Ga0157376_10000001 3300014969 Bacteria 842910
145 Ga0157376_10000048 3300014969 Bacteria 104937
146 Ga0207680_10022387 3300025903 Unclassified 3436
147 Ga0207647_10000398 3300025904 Bacteria 35740
148 Ga0207645_10051691 3300025907 Bacteria 2626
149 Ga0207705_10000010 3300025909 Bacteria 518023
150 Ga0207705_10000019 3300025909 Bacteria 317770
151 Ga0207705_10000129 3300025909 Bacteria 82827
152 Ga0207705_10004206 3300025909 Bacteria 10919
153 Ga0207705_10017733 3300025909 Bacteria 5092
154 Ga0207705_10031056 3300025909 Bacteria 3812
155 Ga0207705_10046675 3300025909 Bacteria 3114
156 Ga0207705_10062411 3300025909 Unclassified 2692
157 Ga0207654_10049297 3300025911 Unclassified 2414
158 Ga0207654_10053572 3300025911 Bacteria 2329
159 Ga0207654_10101522 3300025911 Bacteria 1773
160 Ga0207654_10287687 3300025911 Bacteria 1113
161 Ga0207695_10000005 3300025913 Bacteria 1196715
162 Ga0207695_10050648 3300025913 Unclassified 4366
163 Ga0207671_10001591 3300025914 Bacteria 25807
164 Ga0207660_10004412 3300025917 Bacteria 9167
165 Ga0207660_10006419 3300025917 Bacteria 7623
166 Ga0207660_10222849 3300025917 Unclassified 1481
167 Ga0207657_10001171 3300025919 Bacteria 27817
168 Ga0207657_10007446 3300025919 Bacteria 11225
169 Ga0207657_10013098 3300025919 Bacteria 8150
170 Ga0207649_10573956 3300025920 Unclassified 865
171 Ga0207652_10001055 3300025921 Bacteria 25081
172 Ga0207652_10131725 3300025921 Bacteria 2230
173 Ga0207687_10000001 3300025927 Bacteria 1130810
174 Ga0207687_10000004 3300025927 Bacteria 841177
175 Ga0207687_10000060 3300025927 Bacteria 84771
176 Ga0207687_10008323 3300025927 Bacteria 6787
177 Ga0207644_10044287 3300025931 Bacteria 3161
178 Ga0207644_10299002 3300025931 Unclassified 1296
179 Ga0207690_10121347 3300025932 Bacteria 1899
180 Ga0207690_10489252 3300025932 Bacteria 994
181 Ga0207706_10000004 3300025933 Bacteria 280765
182 Ga0207686_10000001 3300025934 Bacteria 1169580
183 Ga0207686_10049760 3300025934 Bacteria 2603
184 Ga0207686_10197036 3300025934 Unclassified 1440
185 Ga0207709_10000002 3300025935 Bacteria 1171536
186 Ga0207669_10004555 3300025937 Bacteria 6113
187 Ga0207704_10000901 3300025938 Bacteria 13168
188 Ga0207704_10025961 3300025938 Bacteria 3206
189 Ga0207711_10047005 3300025941 Bacteria 3689
190 Ga0207661_10001570 3300025944 Bacteria 15557
191 Ga0207661_10003229 3300025944 Bacteria 11296
192 Ga0207679_10000074 3300025945 Bacteria 89341
193 Ga0207667_10008926 3300025949 Bacteria 11858
194 Ga0207667_10043760 3300025949 Unclassified 4750
195 Ga0207667_10096546 3300025949 Bacteria 3050
196 Ga0207651_10001709 3300025960 Bacteria 10135
197 Ga0207658_10009073 3300025986 Bacteria 6745
198 Ga0207658_10026990 3300025986 Bacteria 4031
199 Ga0207703_10338690 3300026035 Bacteria 1382
200 Ga0207639_10004839 3300026041 Bacteria 9081
201 Ga0207702_10000051 3300026078 Bacteria 139040
202 Ga0207702_10000234 3300026078 Bacteria 64274
203 Ga0207702_10001587 3300026078 Bacteria 22485
204 Ga0207702_10013572 3300026078 Bacteria 6766
205 Ga0207702_10014248 3300026078 Bacteria 6603
206 Ga0207702_10970639 3300026078 Unclassified 843
207 Ga0207641_10121001 3300026088 Bacteria 2336
208 Ga0207641_10190783 3300026088 Unclassified 1883
209 Ga0207674_10000032 3300026116 Bacteria 142389
210 Ga0207674_10077678 3300026116 Bacteria 3325
211 Ga0207683_10017337 3300026121 Bacteria 6138
212 Ga0207683_10144123 3300026121 Unclassified 2147
213 Ga0207698_10000024 3300026142 Bacteria 123946
214 Ga0268266_10000942 3300028379 Bacteria 37115
215 Ga0268264_10096276 3300028381 Bacteria 2563
216 Ga0265337_1016473 3300028556 Bacteria 2388
217 Ga0265334_10000013 3300028573 Bacteria 155968
218 Ga0265338_10000060 3300028800 Bacteria 197991
219 Ga0265338_10000758 3300028800 Bacteria 55090
220 Ga0265338_10004085 3300028800 Bacteria 19992
221 Ga0265338_10010610 3300028800 Bacteria 10770
222 Ga0265338_10119592 3300028800 Bacteria 2102
223 Ga0265340_10000138 3300031247 Bacteria 36616
224 Ga0265327_10025167 3300031251 Bacteria 3477
225 Ga0316576_10002176 3300031727 Bacteria 11058
226 Ga0316578_10096445 3300031728 Bacteria 1770
227 Ga0316577_10002693 3300031733 Bacteria 8842
228 Ga0316574_0141376 3300035398 Bacteria 1551
229 Ga0373925_0209673 3300037068 Bacteria 1552
230 Ga0395899_0004126 3300037312 Bacteria 11431
231 Ga0395899_0292618 3300037312 Bacteria 1104
232 Ga0395900_0000001 3300037418 Bacteria 931146
233 Ga0395900_0000245 3300037418 Bacteria 85245
234 Ga0395898_0000002 3300037466 Bacteria 931013
235 Ga0395898_0038717 3300037466 Unclassified 4724
236 Ga0395905_0088745 3300037471 Bacteria 2898
237 Ga0395901_0000006 3300038443 Bacteria 514112
238 Ga0395901_0032896 3300038443 Bacteria 5350
239 Ga0395901_0063979 3300038443 Bacteria 3828
240 Ga0395901_0463856 3300038443 Bacteria 1294
241 Ga0439463_002682 3300042016 Unclassified 4511
242 Ga0439464_0000003 3300042439 Bacteria 47582
243 Ga0451577_0003523 3300042876 Bacteria 17332
244 Ga0466963_0144857 3300044694 Bacteria 1647
245 Ga0453684_0000254 3300044712 Bacteria 229888
246 Ga0453684_0313089 3300044712 Bacteria 1780
247 Ga0495583_0063667 3300046506 Unclassified 1638
248 Ga0495671_0034458 3300046692 Bacteria 2574
249 Ga0495649_0002460 3300046694 Bacteria 13029
250 Ga0496112_0007409 3300048915 Bacteria 9741
251 Ga0496115_0000001 3300048918 Bacteria 367230
252 Ga0496124_0112915 3300048927 Bacteria 2184
253 Ga0496126_0050443 3300048929 Bacteria 3792
254 Ga0501031_0000183 3300049568 Bacteria 35195
255 Ga0501032_0000176 3300049569 Bacteria 52456
256 Ga0501033_0002697 3300049570 Bacteria 14885
257 Ga0501033_0070313 3300049570 Unclassified 2572
258 Ga0501034_0002390 3300049571 Bacteria 22779
259 Ga0501034_0006466 3300049571 Bacteria 12620
260 Ga0501036_0002947 3300049572 Bacteria 13520
261 Ga0501036_0020309 3300049572 Bacteria 5579
262 Ga0501037_0000137 3300049573 Bacteria 68308
263 Ga0501037_0017337 3300049573 Bacteria 5305
264 Ga0501037_0037456 3300049573 Bacteria 3576
265 Ga0501037_0047121 3300049573 Bacteria 3160
266 Ga0501038_0002398 3300049574 Bacteria 17462
267 Ga0501038_0286868 3300049574 Bacteria 1294
268 Ga0501040_0101841 3300049576 Bacteria 2004
269 Ga0501040_0170626 3300049576 Bacteria 1540
270 Ga0501043_0000062 3300049579 Bacteria 95664
271 Ga0501043_0067730 3300049579 Bacteria 2803
272 Ga0501046_0000059 3300049580 Bacteria 126801
273 Ga0501047_0000024 3300049581 Bacteria 230397
274 Ga0501047_0006339 3300049581 Bacteria 11125
275 Ga0501047_0481610 3300049581 Bacteria 1068
276 Ga0501048_0000001 3300049582 Bacteria 132132
277 Ga0501048_0021567 3300049582 Bacteria 4716
278 Ga0501069_0052747 3300049585 Bacteria 2265
279 Ga0501070_0018140 3300049586 Bacteria 5904
280 Ga0501070_0162163 3300049586 Bacteria 1843
281 Ga0501073_0004181 3300049589 Bacteria 10830
282 Ga0501080_0335223 3300049742 Bacteria 1367
283 Ga0501083_0024711 3300049744 Bacteria 4161
284 Ga0501276_000625 3300049773 Unclassified 2214
285 Ga0501035_0000005 3300049822 Bacteria 392980
286 Ga0501035_0018513 3300049822 Bacteria 6416
287 Ga0501044_0001150 3300049823 Bacteria 31351
288 Ga0501044_0207589 3300049823 Unclassified 1915
289 nmdc:mga00v17_4293_c1 3300050491 Bacteria 7400
290 nmdc:mga0yw44_5_c1 3300050492 Bacteria 313167
291 nmdc:mga0k408_292565_c1 3300050493 Bacteria 972
292 nmdc:mga0k408_3610_c1 3300050493 Bacteria 6631
293 nmdc:mga06z11_21_c1 3300050494 Bacteria 69936
294 nmdc:mga07m45_7685_c1 3300050496 Bacteria 5517
295 nmdc:mga0qj67_250169_c1 3300050509 Bacteria 1438
296 nmdc:mga0qj67_293394_c1 3300050509 Bacteria 1318
297 nmdc:mga0sz30_10158_c1 3300050516 Unclassified 2258
298 Ga0500610_0000027 3300053079 Bacteria 53458
299 Ga0500644_0000052 3300053088 Bacteria 69890
300 Ga0500644_0000895 3300053088 Bacteria 9610
301 Ga0500644_0004236 3300053088 Bacteria 3584
302 Ga0500646_0000188 3300053090 Bacteria 18682
303 Ga0500583_0097109 3300053092 Bacteria 1439
304 Ga0500651_0000011 3300053093 Bacteria 246573
305 Ga0500650_0000014 3300053098 Bacteria 74133
306 Ga0500562_049753 3300053108 Bacteria 1120
307 Ga0500593_000001 3300053117 Bacteria 784404
308 Ga0500594_0000001 3300053118 Bacteria 1178472
309 Ga0500594_0000342 3300053118 Bacteria 10471
310 Ga0500614_000356 3300053123 Bacteria 11943
311 Ga0500628_000018 3300053129 Bacteria 85560
312 Ga0500642_0002035 3300053130 Bacteria 5873
313 Ga0500561_0000002 3300053137 Bacteria 394147
314 Ga0500568_0009409 3300053139 Bacteria 4646
315 Ga0500577_0000490 3300053142 Bacteria 10156
316 Ga0500577_0007199 3300053142 Bacteria 3109
317 Ga0500579_006995 3300053143 Bacteria 7058
318 Ga0500589_000003 3300053147 Bacteria 220717
319 Ga0500616_0000005 3300053153 Bacteria 961725
320 Ga0500616_0103657 3300053153 Bacteria 1386
321 Ga0500633_0009986 3300053160 Unclassified 2520
322 Ga0500611_000212 3300053727 Bacteria 7019
323 Ga0501082_0010954 3300060353 Bacteria 7803

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005841 Ga0068863_100243477 Ga0068863_1002434772 225
2 3300005327 Ga0070658_10008384 Ga0070658_100083846 228
3 3300025909 Ga0207705_10031056 Ga0207705_100310563 228
4 3300049573 Ga0501037_0047121 Ga0501037_0047121_2419_3114 228
5 3300009101 Ga0105247_10257999 Ga0105247_102579992 230
6 3300049574 Ga0501038_0286868 Ga0501038_0286868_504_1253 239
7 3300053117 Ga0500593_000001 Ga0500593_000001_82264_83013 240
8 3300006846 Ga0075430_100262809 Ga0075430_1002628092 245
9 3300049573 Ga0501037_0037456 Ga0501037_0037456_2583_3356 245
10 3300031727 Ga0316576_10002176 Ga0316576_100021769 252
11 3300031728 Ga0316578_10096445 Ga0316578_100964452 252
12 3300031733 Ga0316577_10002693 Ga0316577_100026933 252
13 3300035398 Ga0316574_0141376 Ga0316574_0141376_647_1471 253
14 3300031251 Ga0265327_10025167 Ga0265327_100251674 256
15 3300009098 Ga0105245_10000001 Ga0105245_10000001774 257
16 3300025927 Ga0207687_10000001 Ga0207687_10000001336 257
17 3300025927 Ga0207687_10000004 Ga0207687_10000004497 257
18 3300026078 Ga0207702_10970639 Ga0207702_109706391 257
19 3300005327 Ga0070658_10013691 Ga0070658_1001369110 258
20 3300005336 Ga0070680_100186526 Ga0070680_1001865262 258
21 3300005530 Ga0070679_100071058 Ga0070679_1000710581 258
22 3300006178 Ga0075367_10101349 Ga0075367_101013492 258
23 3300013307 Ga0157372_10416216 Ga0157372_104162162 258
24 3300025917 Ga0207660_10004412 Ga0207660_100044127 258
25 3300025919 Ga0207657_10001171 Ga0207657_100011712 258
26 3300025921 Ga0207652_10131725 Ga0207652_101317253 258
27 3300048929 Ga0496126_0050443 Ga0496126_0050443_2252_3073 258
28 3300050509 nmdc:mga0qj67_250169_c1 nmdc:mga0qj67_250169_c1_174_986 258
29 3300053130 Ga0500642_0002035 Ga0500642_0002035_444_1259 258
30 3300053147 Ga0500589_000003 Ga0500589_000003_204529_205344 258
31 3300003322 rootL2_10352907 rootL2_103529071 259
32 3300003323 rootH1_10394259 rootH1_103942593 259
33 3300005327 Ga0070658_10000023 Ga0070658_1000002329 259
34 3300005327 Ga0070658_10000051 Ga0070658_1000005177 259
35 3300005327 Ga0070658_10053261 Ga0070658_100532612 259
36 3300005335 Ga0070666_10216351 Ga0070666_102163512 259
37 3300005336 Ga0070680_100003603 Ga0070680_1000036036 259
38 3300005337 Ga0070682_100125160 Ga0070682_1001251602 259
39 3300005339 Ga0070660_100202485 Ga0070660_1002024852 259
40 3300005355 Ga0070671_100039691 Ga0070671_1000396916 259
41 3300005356 Ga0070674_100006019 Ga0070674_1000060193 259
42 3300005364 Ga0070673_100000407 Ga0070673_1000004074 259
43 3300005367 Ga0070667_100004042 Ga0070667_1000040424 259
44 3300005455 Ga0070663_100066059 Ga0070663_1000660592 259
45 3300005456 Ga0070678_100009157 Ga0070678_1000091572 259
46 3300005456 Ga0070678_100035630 Ga0070678_1000356302 259
47 3300005458 Ga0070681_10642269 Ga0070681_106422692 259
48 3300005466 Ga0070685_10000373 Ga0070685_100003735 259
49 3300005466 Ga0070685_10003633 Ga0070685_100036336 259
50 3300005530 Ga0070679_100000522 Ga0070679_10000052235 259
51 3300005548 Ga0070665_100098998 Ga0070665_1000989983 259
52 3300005548 Ga0070665_100294227 Ga0070665_1002942273 259
53 3300005614 Ga0068856_100064332 Ga0068856_1000643323 259
54 3300005841 Ga0068863_100010248 Ga0068863_1000102486 259
55 3300006237 Ga0097621_100063329 Ga0097621_1000633294 259
56 3300006881 Ga0068865_100016391 Ga0068865_1000163914 259
57 3300009093 Ga0105240_10000003 Ga0105240_10000003229 259
58 3300009098 Ga0105245_10000094 Ga0105245_1000009440 259
59 3300009098 Ga0105245_10001082 Ga0105245_1000108217 259
60 3300009098 Ga0105245_10019076 Ga0105245_100190767 259
61 3300009148 Ga0105243_10000001 Ga0105243_100000011021 259
62 3300009174 Ga0105241_10510683 Ga0105241_105106832 259
63 3300009176 Ga0105242_10000001 Ga0105242_10000001237 259
64 3300009176 Ga0105242_10040309 Ga0105242_100403092 259
65 3300009176 Ga0105242_10062773 Ga0105242_100627732 259
66 3300010375 Ga0105239_10017074 Ga0105239_100170745 259
67 3300013296 Ga0157374_10000056 Ga0157374_1000005613 259
68 3300013296 Ga0157374_10000811 Ga0157374_1000081133 259
69 3300013296 Ga0157374_10052509 Ga0157374_100525095 259
70 3300013297 Ga0157378_10031335 Ga0157378_100313354 259
71 3300013306 Ga0163162_10545788 Ga0163162_105457882 259
72 3300014325 Ga0163163_10109897 Ga0163163_101098972 259
73 3300014969 Ga0157376_10000001 Ga0157376_10000001678 259
74 3300025909 Ga0207705_10000019 Ga0207705_10000019115 259
75 3300025909 Ga0207705_10000129 Ga0207705_1000012932 259
76 3300025909 Ga0207705_10046675 Ga0207705_100466753 259
77 3300025911 Ga0207654_10287687 Ga0207654_102876871 259
78 3300025913 Ga0207695_10000005 Ga0207695_10000005236 259
79 3300025914 Ga0207671_10001591 Ga0207671_100015913 259
80 3300025917 Ga0207660_10006419 Ga0207660_100064192 259
81 3300025921 Ga0207652_10001055 Ga0207652_100010555 259
82 3300025927 Ga0207687_10000060 Ga0207687_1000006044 259
83 3300025927 Ga0207687_10008323 Ga0207687_100083233 259
84 3300025931 Ga0207644_10044287 Ga0207644_100442876 259
85 3300025934 Ga0207686_10000001 Ga0207686_10000001119 259
86 3300025934 Ga0207686_10049760 Ga0207686_100497603 259
87 3300025934 Ga0207686_10197036 Ga0207686_101970362 259
88 3300025935 Ga0207709_10000002 Ga0207709_10000002236 259
89 3300025937 Ga0207669_10004555 Ga0207669_100045555 259
90 3300025938 Ga0207704_10025961 Ga0207704_100259612 259
91 3300025960 Ga0207651_10001709 Ga0207651_100017098 259
92 3300025986 Ga0207658_10009073 Ga0207658_100090735 259
93 3300026078 Ga0207702_10014248 Ga0207702_100142487 259
94 3300026121 Ga0207683_10017337 Ga0207683_100173377 259
95 3300026121 Ga0207683_10144123 Ga0207683_101441232 259
96 3300028379 Ga0268266_10000942 Ga0268266_1000094236 259
97 3300028556 Ga0265337_1016473 Ga0265337_10164732 259
98 3300028573 Ga0265334_10000013 Ga0265334_10000013147 259
99 3300028800 Ga0265338_10000060 Ga0265338_10000060155 259
100 3300028800 Ga0265338_10000758 Ga0265338_1000075827 259
101 3300031247 Ga0265340_10000138 Ga0265340_100001383 259
102 3300037312 Ga0395899_0292618 Ga0395899_0292618_279_1085 259
103 3300037418 Ga0395900_0000245 Ga0395900_0000245_12449_13255 259
104 3300037466 Ga0395898_0038717 Ga0395898_0038717_2547_3353 259
105 3300037471 Ga0395905_0088745 Ga0395905_0088745_535_1341 259
106 3300038443 Ga0395901_0063979 Ga0395901_0063979_2631_3437 259
107 3300048915 Ga0496112_0007409 Ga0496112_0007409_7495_8313 259
108 3300049568 Ga0501031_0000183 Ga0501031_0000183_6642_7460 259
109 3300049569 Ga0501032_0000176 Ga0501032_0000176_44899_45717 259
110 3300049570 Ga0501033_0002697 Ga0501033_0002697_12252_13079 259
111 3300049570 Ga0501033_0070313 Ga0501033_0070313_1599_2417 259
112 3300049571 Ga0501034_0002390 Ga0501034_0002390_16970_17797 259
113 3300049571 Ga0501034_0006466 Ga0501034_0006466_7047_7865 259
114 3300049572 Ga0501036_0002947 Ga0501036_0002947_7331_8149 259
115 3300049572 Ga0501036_0020309 Ga0501036_0020309_1830_2657 259
116 3300049573 Ga0501037_0000137 Ga0501037_0000137_11988_12806 259
117 3300049573 Ga0501037_0017337 Ga0501037_0017337_2897_3724 259
118 3300049574 Ga0501038_0002398 Ga0501038_0002398_11427_12245 259
119 3300049576 Ga0501040_0101841 Ga0501040_0101841_268_1086 259
120 3300049576 Ga0501040_0170626 Ga0501040_0170626_289_1116 259
121 3300049579 Ga0501043_0000062 Ga0501043_0000062_5506_6324 259
122 3300049579 Ga0501043_0067730 Ga0501043_0067730_926_1753 259
123 3300049580 Ga0501046_0000059 Ga0501046_0000059_119806_120624 259
124 3300049581 Ga0501047_0000024 Ga0501047_0000024_212894_213721 259
125 3300049581 Ga0501047_0006339 Ga0501047_0006339_5263_6081 259
126 3300049581 Ga0501047_0481610 Ga0501047_0481610_107_925 259
127 3300049582 Ga0501048_0000001 Ga0501048_0000001_76105_76923 259
128 3300049582 Ga0501048_0021567 Ga0501048_0021567_461_1288 259
129 3300049585 Ga0501069_0052747 Ga0501069_0052747_792_1610 259
130 3300049586 Ga0501070_0018140 Ga0501070_0018140_4008_4814 259
131 3300049586 Ga0501070_0162163 Ga0501070_0162163_570_1385 259
132 3300049589 Ga0501073_0004181 Ga0501073_0004181_3203_4021 259
133 3300049742 Ga0501080_0335223 Ga0501080_0335223_50_868 259
134 3300049744 Ga0501083_0024711 Ga0501083_0024711_709_1527 259
135 3300049822 Ga0501035_0000005 Ga0501035_0000005_212979_213806 259
136 3300049822 Ga0501035_0018513 Ga0501035_0018513_3482_4300 259
137 3300049823 Ga0501044_0001150 Ga0501044_0001150_17571_18398 259
138 3300049823 Ga0501044_0207589 Ga0501044_0207589_324_1130 259
139 3300053090 Ga0500646_0000188 Ga0500646_0000188_9969_10790 259
140 3300053092 Ga0500583_0097109 Ga0500583_0097109_318_1139 259
141 3300053093 Ga0500651_0000011 Ga0500651_0000011_118848_119666 259
142 3300053098 Ga0500650_0000014 Ga0500650_0000014_38559_39380 259
143 3300053108 Ga0500562_049753 Ga0500562_049753_204_1025 259
144 3300053118 Ga0500594_0000001 Ga0500594_0000001_634738_635559 259
145 3300053123 Ga0500614_000356 Ga0500614_000356_2894_3712 259
146 3300053142 Ga0500577_0000490 Ga0500577_0000490_7957_8778 259
147 3300053143 Ga0500579_006995 Ga0500579_006995_1134_1955 259
148 3300053153 Ga0500616_0000005 Ga0500616_0000005_6445_7263 259
149 3300053153 Ga0500616_0103657 Ga0500616_0103657_321_1142 259
150 3300053160 Ga0500633_0009986 Ga0500633_0009986_713_1534 259
151 3300060353 Ga0501082_0010954 Ga0501082_0010954_5183_6001 259
152 3300005327 Ga0070658_10003191 Ga0070658_100031914 260
153 3300005327 Ga0070658_10004932 Ga0070658_100049328 260
154 3300005327 Ga0070658_10022208 Ga0070658_100222084 260
155 3300005335 Ga0070666_10012015 Ga0070666_100120151 260
156 3300005336 Ga0070680_100186606 Ga0070680_1001866062 260
157 3300005341 Ga0070691_10004152 Ga0070691_100041525 260
158 3300005458 Ga0070681_10298422 Ga0070681_102984221 260
159 3300005530 Ga0070679_100002032 Ga0070679_10000203216 260
160 3300005563 Ga0068855_100001617 Ga0068855_1000016176 260
161 3300005563 Ga0068855_100077879 Ga0068855_1000778793 260
162 3300005614 Ga0068856_100193277 Ga0068856_1001932772 260
163 3300009093 Ga0105240_10027733 Ga0105240_100277336 260
164 3300009987 Ga0105030_104567 Ga0105030_1045672 260
165 3300010375 Ga0105239_10028536 Ga0105239_100285369 260
166 3300013105 Ga0157369_10752159 Ga0157369_107521591 260
167 3300013874 Ga0157514_100248 Ga0157514_1002481 260
168 3300025903 Ga0207680_10022387 Ga0207680_100223872 260
169 3300025909 Ga0207705_10004206 Ga0207705_100042068 260
170 3300025909 Ga0207705_10017733 Ga0207705_100177333 260
171 3300025909 Ga0207705_10062411 Ga0207705_100624114 260
172 3300025919 Ga0207657_10013098 Ga0207657_100130983 260
173 3300025949 Ga0207667_10008926 Ga0207667_1000892610 260
174 3300025949 Ga0207667_10043760 Ga0207667_100437603 260
175 3300026041 Ga0207639_10004839 Ga0207639_100048395 260
176 3300026078 Ga0207702_10013572 Ga0207702_100135726 260
177 3300028800 Ga0265338_10010610 Ga0265338_100106102 260
178 3300028800 Ga0265338_10119592 Ga0265338_101195922 260
179 3300038443 Ga0395901_0032896 Ga0395901_0032896_3385_4218 260
180 3300046692 Ga0495671_0034458 Ga0495671_0034458_1560_2396 260
181 3300053079 Ga0500610_0000027 Ga0500610_0000027_12148_12993 260
182 3300053088 Ga0500644_0000052 Ga0500644_0000052_10668_11513 260
183 3300053088 Ga0500644_0000895 Ga0500644_0000895_6664_7500 260
184 3300053088 Ga0500644_0004236 Ga0500644_0004236_1131_1964 260
185 3300053118 Ga0500594_0000342 Ga0500594_0000342_1603_2436 260
186 3300053129 Ga0500628_000018 Ga0500628_000018_63383_64216 260
187 3300053142 Ga0500577_0007199 Ga0500577_0007199_1428_2264 260
188 3300053727 Ga0500611_000212 Ga0500611_000212_5748_6584 260
189 3300001979 JGI24740J21852_10010916 JGI24740J21852_100109163 261
190 3300002244 JGI24742J22300_10000069 JGI24742J22300_1000006915 261
191 3300005328 Ga0070676_10003599 Ga0070676_100035999 261
192 3300005329 Ga0070683_100000120 Ga0070683_1000001205 261
193 3300005336 Ga0070680_100176016 Ga0070680_1001760163 261
194 3300005355 Ga0070671_100388998 Ga0070671_1003889981 261
195 3300005367 Ga0070667_100059727 Ga0070667_1000597274 261
196 3300005535 Ga0070684_100008029 Ga0070684_1000080295 261
197 3300005563 Ga0068855_100081601 Ga0068855_1000816012 261
198 3300005614 Ga0068856_100003098 Ga0068856_1000030989 261
199 3300005617 Ga0068859_100076183 Ga0068859_1000761833 261
200 3300005617 Ga0068859_100188375 Ga0068859_1001883753 261
201 3300005842 Ga0068858_100237882 Ga0068858_1002378823 261
202 3300005843 Ga0068860_100018295 Ga0068860_1000182957 261
203 3300006178 Ga0075367_10000009 Ga0075367_100000094 261
204 3300006195 Ga0075366_10240569 Ga0075366_102405692 261
205 3300006931 Ga0097620_100076185 Ga0097620_1000761853 261
206 3300006931 Ga0097620_100188379 Ga0097620_1001883793 261
207 3300009093 Ga0105240_10006120 Ga0105240_1000612011 261
208 3300009148 Ga0105243_10026522 Ga0105243_100265223 261
209 3300009174 Ga0105241_10050114 Ga0105241_100501143 261
210 3300009177 Ga0105248_10171961 Ga0105248_101719613 261
211 3300011119 Ga0105246_10018585 Ga0105246_100185852 261
212 3300013100 Ga0157373_10000059 Ga0157373_1000005965 261
213 3300014325 Ga0163163_10131724 Ga0163163_101317242 261
214 3300025907 Ga0207645_10051691 Ga0207645_100516912 261
215 3300025911 Ga0207654_10049297 Ga0207654_100492972 261
216 3300025911 Ga0207654_10101522 Ga0207654_101015222 261
217 3300025913 Ga0207695_10050648 Ga0207695_100506485 261
218 3300025917 Ga0207660_10222849 Ga0207660_102228493 261
219 3300025931 Ga0207644_10299002 Ga0207644_102990022 261
220 3300025941 Ga0207711_10047005 Ga0207711_100470052 261
221 3300025944 Ga0207661_10001570 Ga0207661_100015704 261
222 3300025949 Ga0207667_10096546 Ga0207667_100965465 261
223 3300025986 Ga0207658_10026990 Ga0207658_100269905 261
224 3300026035 Ga0207703_10338690 Ga0207703_103386902 261
225 3300026078 Ga0207702_10001587 Ga0207702_100015878 261
226 3300026088 Ga0207641_10121001 Ga0207641_101210012 261
227 3300026088 Ga0207641_10190783 Ga0207641_101907833 261
228 3300028381 Ga0268264_10096276 Ga0268264_100962762 261
229 3300028800 Ga0265338_10004085 Ga0265338_100040859 261
230 3300037068 Ga0373925_0209673 Ga0373925_0209673_516_1328 261
231 3300044694 Ga0466963_0144857 Ga0466963_0144857_263_1138 261
232 3300044712 Ga0453684_0313089 Ga0453684_0313089_730_1584 261
233 3300046506 Ga0495583_0063667 Ga0495583_0063667_75_899 261
234 3300046694 Ga0495649_0002460 Ga0495649_0002460_3011_3835 261
235 3300048927 Ga0496124_0112915 Ga0496124_0112915_868_1698 261
236 3300049773 Ga0501276_000625 Ga0501276_000625_175_999 261
237 3300050493 nmdc:mga0k408_292565_c1 nmdc:mga0k408_292565_c1_126_959 261
238 3300050494 nmdc:mga06z11_21_c1 nmdc:mga06z11_21_c1_48158_48994 261
239 3300050509 nmdc:mga0qj67_293394_c1 nmdc:mga0qj67_293394_c1_30_854 261
240 3300053137 Ga0500561_0000002 Ga0500561_0000002_170809_171633 261
241 3300005577 Ga0068857_100065711 Ga0068857_1000657112 262
242 3300013102 Ga0157371_10038906 Ga0157371_100389063 262
243 3300013307 Ga0157372_10060415 Ga0157372_100604154 262
244 3300026116 Ga0207674_10077678 Ga0207674_100776783 262
245 3300042876 Ga0451577_0003523 Ga0451577_0003523_1306_2160 262
246 3300044712 Ga0453684_0000254 Ga0453684_0000254_185142_185996 262
247 3300001979 JGI24740J21852_10000155 JGI24740J21852_1000015520 263
248 3300001979 JGI24740J21852_10035476 JGI24740J21852_100354762 263
249 3300001990 JGI24737J22298_10000065 JGI24737J22298_1000006524 263
250 3300002067 JGI24735J21928_10000023 JGI24735J21928_1000002350 263
251 3300003320 rootH2_10261705 rootH2_102617053 263
252 3300003322 rootL2_10124187 rootL2_101241872 263
253 3300005327 Ga0070658_10000009 Ga0070658_10000009107 263
254 3300005329 Ga0070683_100036756 Ga0070683_1000367565 263
255 3300005339 Ga0070660_100011870 Ga0070660_1000118705 263
256 3300005344 Ga0070661_100038209 Ga0070661_1000382093 263
257 3300005366 Ga0070659_100138248 Ga0070659_1001382481 263
258 3300005455 Ga0070663_100087146 Ga0070663_1000871464 263
259 3300005457 Ga0070662_100003065 Ga0070662_1000030655 263
260 3300005535 Ga0070684_100057288 Ga0070684_1000572883 263
261 3300005564 Ga0070664_100000188 Ga0070664_10000018817 263
262 3300005577 Ga0068857_100000147 Ga0068857_1000001478 263
263 3300005614 Ga0068856_100000344 Ga0068856_10000034439 263
264 3300005614 Ga0068856_100000404 Ga0068856_10000040419 263
265 3300005616 Ga0068852_100000011 Ga0068852_100000011134 263
266 3300005616 Ga0068852_100183905 Ga0068852_1001839051 263
267 3300006038 Ga0075365_10041203 Ga0075365_100412035 263
268 3300006051 Ga0075364_10023988 Ga0075364_100239884 263
269 3300006186 Ga0075369_10037838 Ga0075369_100378382 263
270 3300006195 Ga0075366_10005872 Ga0075366_100058723 263
271 3300006237 Ga0097621_100177874 Ga0097621_1001778743 263
272 3300006358 Ga0068871_100527196 Ga0068871_1005271962 263
273 3300006881 Ga0068865_100000604 Ga0068865_10000060413 263
274 3300009098 Ga0105245_10050947 Ga0105245_100509472 263
275 3300009174 Ga0105241_10019670 Ga0105241_100196706 263
276 3300009551 Ga0105238_10080108 Ga0105238_100801085 263
277 3300010375 Ga0105239_10000599 Ga0105239_1000059923 263
278 3300011119 Ga0105246_10001837 Ga0105246_100018375 263
279 3300011119 Ga0105246_10002106 Ga0105246_100021066 263
280 3300011119 Ga0105246_10007356 Ga0105246_100073565 263
281 3300012503 Ga0157313_1001538 Ga0157313_10015383 263
282 3300013100 Ga0157373_10000422 Ga0157373_1000042215 263
283 3300013100 Ga0157373_10001078 Ga0157373_1000107819 263
284 3300013100 Ga0157373_10015412 Ga0157373_100154125 263
285 3300013102 Ga0157371_10011749 Ga0157371_100117497 263
286 3300013104 Ga0157370_10000167 Ga0157370_1000016727 263
287 3300013104 Ga0157370_10006030 Ga0157370_100060306 263
288 3300013105 Ga0157369_10000026 Ga0157369_10000026152 263
289 3300013105 Ga0157369_10001342 Ga0157369_1000134222 263
290 3300013296 Ga0157374_10006925 Ga0157374_100069257 263
291 3300013307 Ga0157372_10122923 Ga0157372_101229234 263
292 3300014325 Ga0163163_10314589 Ga0163163_103145893 263
293 3300014745 Ga0157377_10024740 Ga0157377_100247403 263
294 3300014969 Ga0157376_10000048 Ga0157376_1000004811 263
295 3300025904 Ga0207647_10000398 Ga0207647_1000039826 263
296 3300025909 Ga0207705_10000010 Ga0207705_10000010419 263
297 3300025911 Ga0207654_10053572 Ga0207654_100535722 263
298 3300025919 Ga0207657_10007446 Ga0207657_100074465 263
299 3300025920 Ga0207649_10573956 Ga0207649_105739561 263
300 3300025932 Ga0207690_10121347 Ga0207690_101213472 263
301 3300025932 Ga0207690_10489252 Ga0207690_104892522 263
302 3300025933 Ga0207706_10000004 Ga0207706_10000004116 263
303 3300025938 Ga0207704_10000901 Ga0207704_100009015 263
304 3300025944 Ga0207661_10003229 Ga0207661_100032296 263
305 3300025945 Ga0207679_10000074 Ga0207679_1000007438 263
306 3300026078 Ga0207702_10000051 Ga0207702_10000051138 263
307 3300026078 Ga0207702_10000234 Ga0207702_1000023433 263
308 3300026116 Ga0207674_10000032 Ga0207674_10000032132 263
309 3300026142 Ga0207698_10000024 Ga0207698_1000002438 263
310 3300037312 Ga0395899_0004126 Ga0395899_0004126_814_1605 263
311 3300037418 Ga0395900_0000001 Ga0395900_0000001_472187_472978 263
312 3300037466 Ga0395898_0000002 Ga0395898_0000002_633028_633819 263
313 3300038443 Ga0395901_0000006 Ga0395901_0000006_278704_279495 263
314 3300038443 Ga0395901_0463856 Ga0395901_0463856_110_901 263
315 3300042016 Ga0439463_002682 Ga0439463_002682_3351_4142 263
316 3300042439 Ga0439464_0000003 Ga0439464_0000003_44627_45418 263
317 3300048918 Ga0496115_0000001 Ga0496115_0000001_154417_155217 263
318 3300050491 nmdc:mga00v17_4293_c1 nmdc:mga00v17_4293_c1_4626_5417 263
319 3300050492 nmdc:mga0yw44_5_c1 nmdc:mga0yw44_5_c1_32685_33485 263
320 3300050493 nmdc:mga0k408_3610_c1 nmdc:mga0k408_3610_c1_4827_5618 263
321 3300050496 nmdc:mga07m45_7685_c1 nmdc:mga07m45_7685_c1_3948_4739 263
322 3300050516 nmdc:mga0sz30_10158_c1 nmdc:mga0sz30_10158_c1_560_1351 263
323 3300053139 Ga0500568_0009409 Ga0500568_0009409_3099_3917 263

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00730

HhH-GPD

HhH-GPD superfamily base excision DNA repair protein

57

182

0.97

PF00633

HHH

Helix-hairpin-helix motif

121

150

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6u7t-assembly1.cif.gz_A muty adenine glycosylase bound to dna containing a transition state analog (1n) paired with d(8-oxo-g) 0.9347 1 182
1vrl-assembly1.cif.gz_A muty adenine glycosylase in complex with dna and soaked adenine free base 0.9344 2 182
8dwf-assembly2.cif.gz_D glycosylase muty variant e43s in complex with dna containing d(8-oxo-g) paired with substrate adenine 0.93 1 182
8dw0-assembly1.cif.gz_A glycosylase muty variant n146s in complex with dna containing d(8-oxo-g) paired with an enzyme-generated abasic site (ap) product and crystallized with sodium acetate 0.9291 1 182
8dvy-assembly1.cif.gz_A dna glycosylase muty variant n146s in complex with dna containing d(8-oxo-g) paired with an enzyme-generated abasic site product (ap) and crystalized with calcium acetate 0.9289 3 182
ID Description Score Start End Superfamily
af_A0A1D6IX31_1_95_1.10.1670.10 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.9751 39 131 1.10.1670.10
1rrqA02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9692 20 128 1.10.340.30
1kg2A02 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9577 20 124 1.10.340.30
af_P9WQ09_31_141_1.10.340.30 Mainly Alpha;Orthogonal Bundle;Endonuclease III; domain 1;Hypothetical protein; domain 2 0.9478 20 126 1.10.340.30
af_A0A1D6IX31_1_95_1.10.1670.10 Mainly Alpha;Orthogonal Bundle;Endonuclease Iii, domain 2;Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) 0.9452 39 131 1.10.1670.10

Feature Viewer

pLDDT pTM Quality
92.05 0.88 High
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Predicted Structure (AlphaFold2)

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