F406547

General Info

Members Datasets Scaffolds Average Seq Length
322 244 644 267

Family's Representative Sequence

Representative Sequence 3300042005|Ga0439448_0013129|Ga0439448_0013129_1400_2308
Length 302
Sequence MAGVRGAVVESTVAARCSTPGGRWLFRQSTEGGGGMAGKGAETLSRKVYEKELLRLQTELVKLQEWVRAEGVRLVVVFEGRDAAGKGGTIKRVAEHLNPRVARIAALPKPTERERTQWYFQRYVEHLPAAGEIVLFDRSWYNRAGVEHVMGFCTKEEHQLFLRQCPIFERMLTEAGIVLRKYWFSVSDTEQQERFRKRLEDPLRRWKLSPMDLESITHWEAYSRAKDEMLVHTDISEAPWFVVESDDKRRARLNMIAHLLGSVPYREVPPPVLELPERPRSTGYERSPRDLQTYVPDHAATL

Samples

Sample ID Description Type Environment
1 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
2 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
22 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
23 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
29 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
30 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
32 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
36 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
39 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
43 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
44 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
45 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
46 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
47 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
73 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
74 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
75 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
76 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
77 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
78 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
79 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
80 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
83 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
84 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
85 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
86 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
87 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
92 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
93 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
94 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
95 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
96 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
97 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
98 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
99 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
100 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
101 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
102 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
103 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
104 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
105 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
106 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
107 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
108 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
109 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
110 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
111 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
114 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
115 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
116 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
117 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
118 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
119 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
120 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
121 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
122 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
123 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
124 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
125 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
126 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
127 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
128 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
131 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
132 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
133 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
134 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
135 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
136 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
137 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
138 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
139 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
140 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
141 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
142 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
143 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
144 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
145 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
146 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
147 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
148 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
149 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
152 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
153 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
154 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
155 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
156 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
157 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
158 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
159 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
160 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
161 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
162 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
163 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
164 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
165 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
166 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
167 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
168 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
169 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
170 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
171 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
172 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
173 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
174 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
175 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
176 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
177 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
178 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
179 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
180 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
181 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
182 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
183 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
184 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
185 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
186 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
189 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
190 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
191 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
192 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
193 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
194 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
195 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
196 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
197 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
198 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
199 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
200 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
201 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
202 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
203 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
204 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
205 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
206 2643221647 Streptomyces sp. Root369 Isolate Unclassified
207 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
208 2643221714 Streptomyces sp. Root264 Isolate Unclassified
209 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
210 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
211 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
212 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
213 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
214 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
215 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
216 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
217 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
218 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
219 2862574272 Streptomyces sp. AcE210 Isolate Nodule
220 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
221 2867428634 Streptomyces sp. RP5T Isolate Unclassified
222 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
223 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
224 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
225 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
226 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
227 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
228 2954002825 Streptomyces turgidiscabies W2I16 Isolate Rhizosphere
229 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
230 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
231 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
232 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
233 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
234 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
235 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
236 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
237 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
238 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
239 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
240 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
241 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
242 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
243 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
244 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 85.71
Metatranscriptomes 0.62
Isolates 13.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.83
Nodule 0.93
Rhizoplane 2.8
Rhizosphere 75.47
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439448_0013129 3300042005 Bacteria 2486
2 JGI24737J22298_10091463 3300001990 Bacteria 902
3 rootH1_10040875 3300003323 Bacteria 3725
4 Ga0006562J51391_1056157 3300003578 Bacteria 2620
5 Ga0068869_100114812 3300005334 Bacteria 2053
6 Ga0068868_100469080 3300005338 Bacteria 1098
7 Ga0070669_100249650 3300005353 Bacteria 1412
8 Ga0070675_100254205 3300005354 Bacteria 1539
9 Ga0070671_100308136 3300005355 Bacteria 1348
10 Ga0070710_10001118 3300005437 Bacteria 12696
11 Ga0070708_100037207 3300005445 Bacteria 4245
12 Ga0070678_100550576 3300005456 Bacteria 1024
13 Ga0070662_100057667 3300005457 Bacteria 2822
14 Ga0070707_100245100 3300005468 Bacteria 1744
15 Ga0070707_100377783 3300005468 Bacteria 1377
16 Ga0070698_100000534 3300005471 Bacteria 40564
17 Ga0070679_100192580 3300005530 Bacteria 2007
18 Ga0070665_100661094 3300005548 Bacteria 1058
19 Ga0068852_100074050 3300005616 Bacteria 2998
20 Ga0068866_10210500 3300005718 Bacteria 1167
21 Ga0068861_100111600 3300005719 Bacteria 2191
22 Ga0068858_100288768 3300005842 Bacteria 1563
23 Ga0081455_10289465 3300005937 Bacteria 1180
24 Ga0081538_10000029 3300005981 Bacteria 124335
25 Ga0075365_10508169 3300006038 Bacteria 852
26 Ga0075368_10039649 3300006042 Bacteria 1847
27 Ga0075363_100029750 3300006048 Bacteria 2822
28 Ga0075364_10023744 3300006051 Bacteria 3885
29 Ga0075362_10025652 3300006177 Bacteria 2512
30 Ga0075367_10021081 3300006178 Bacteria 3638
31 Ga0097621_100099999 3300006237 Bacteria 2439
32 Ga0075436_100308731 3300006914 Bacteria 1135
33 Ga0105251_10050652 3300009011 Bacteria 1983
34 Ga0111539_10703772 3300009094 Bacteria 1176
35 Ga0105245_10013108 3300009098 Bacteria 7223
36 Ga0114129_10306863 3300009147 Bacteria 2114
37 Ga0105242_10267141 3300009176 Bacteria 1548
38 Ga0105248_10091324 3300009177 Bacteria 3429
39 Ga0157369_10193154 3300013105 Bacteria 2138
40 Ga0157378_10190674 3300013297 Bacteria 1933
41 Ga0163162_10207233 3300013306 Bacteria 2090
42 Ga0157372_10009038 3300013307 Bacteria 10588
43 Ga0157372_10663082 3300013307 Bacteria 1215
44 Ga0163163_10743273 3300014325 Bacteria 1044
45 Ga0157380_10024098 3300014326 Bacteria 4601
46 Ga0157380_10069472 3300014326 Bacteria 2842
47 Ga0182008_10005073 3300014497 Bacteria 7565
48 Ga0182007_10001930 3300015262 Bacteria 10727
49 Ga0183367_1012 3300015688 Bacteria 347438
50 Ga0154015_1327466 3300020610 Bacteria 1237
51 Ga0209758_1008704 3300025297 Bacteria 6492
52 Ga0207426_1032808 3300025302 Bacteria 1680
53 Ga0207692_10000956 3300025898 Bacteria 10499
54 Ga0207688_10070160 3300025901 Bacteria 1987
55 Ga0207680_10271190 3300025903 Bacteria 1177
56 Ga0207647_10028000 3300025904 Bacteria 3667
57 Ga0207699_10186567 3300025906 Bacteria 1397
58 Ga0207646_10366577 3300025922 Bacteria 1301
59 Ga0207681_10227177 3300025923 Bacteria 1447
60 Ga0207650_10063809 3300025925 Bacteria 2755
61 Ga0207644_10048840 3300025931 Bacteria 3027
62 Ga0207706_10122290 3300025933 Bacteria 2289
63 Ga0207669_10160197 3300025937 Bacteria 1589
64 Ga0207689_10117296 3300025942 Bacteria 2189
65 Ga0207668_10076360 3300025972 Bacteria 2412
66 Ga0207658_10218867 3300025986 Bacteria 1601
67 Ga0207703_10191894 3300026035 Bacteria 1810
68 Ga0207639_10186823 3300026041 Bacteria 1767
69 Ga0207678_10046035 3300026067 Bacteria 3773
70 Ga0207675_100027582 3300026118 Bacteria 5289
71 Ga0207675_100135430 3300026118 Bacteria 2337
72 Ga0207683_10240779 3300026121 Bacteria 1650
73 Ga0209371_1022862 3300027312 Bacteria 1486
74 Ga0209813_10004709 3300027866 Bacteria 3269
75 Ga0268266_10641983 3300028379 Bacteria 1021
76 Ga0307517_10008153 3300028786 Bacteria 15067
77 Ga0307515_10001878 3300028794 Bacteria 46732
78 Ga0307515_10193805 3300028794 Bacteria 1932
79 Ga0265338_10008799 3300028800 Bacteria 12184
80 Ga0268256_1028502 3300030500 Bacteria 1378
81 Ga0307511_10000287 3300030521 Bacteria 53195
82 Ga0307512_10005725 3300030522 Bacteria 12828
83 Ga0316177_1009216 3300030731 Bacteria 1090
84 Ga0316176_1047534 3300030732 Bacteria 4398
85 Ga0314311_1237768 3300030733 Bacteria 1656
86 Ga0307513_10009321 3300031456 Bacteria 12428
87 Ga0307513_10009943 3300031456 Bacteria 11996
88 Ga0307509_10008280 3300031507 Bacteria 13286
89 Ga0307509_10008985 3300031507 Bacteria 12596
90 Ga0307509_10060746 3300031507 Bacteria 3993
91 Ga0307514_10007225 3300031649 Bacteria 9579
92 Ga0307514_10071838 3300031649 Bacteria 2593
93 Ga0307514_10084203 3300031649 Bacteria 2341
94 Ga0307516_10005482 3300031730 Bacteria 15149
95 Ga0307516_10038983 3300031730 Bacteria 4737
96 Ga0307413_10030153 3300031824 Bacteria 3044
97 Ga0307518_10064762 3300031838 Bacteria 2652
98 Ga0307518_10081936 3300031838 Bacteria 2329
99 Ga0307410_10050186 3300031852 Bacteria 2804
100 Ga0307410_10285593 3300031852 Bacteria 1296
101 Ga0307409_100137155 3300031995 Bacteria 2101
102 Ga0307416_100187943 3300032002 Bacteria 1944
103 Ga0307414_10054512 3300032004 Bacteria 2795
104 Ga0307414_10203768 3300032004 Bacteria 1611
105 Ga0307411_10017559 3300032005 Bacteria 4082
106 Ga0307411_10081430 3300032005 Bacteria 2229
107 Ga0307507_10031944 3300033179 Bacteria 5511
108 Ga0307507_10036267 3300033179 Bacteria 5044
109 Ga0307507_10065481 3300033179 Bacteria 3341
110 Ga0307507_10272953 3300033179 Bacteria 1066
111 Ga0307510_10004690 3300033180 Bacteria 16139
112 Ga0307510_10073620 3300033180 Bacteria 3383
113 Ga0307510_10143855 3300033180 Bacteria 2021
114 Ga0307510_10234057 3300033180 Bacteria 1337
115 Ga0373953_0030087 3300035117 Bacteria 2104
116 Ga0373937_0022407 3300036401 Bacteria 5679
117 Ga0373925_0000926 3300037068 Bacteria 26707
118 Ga0395900_0204688 3300037418 Bacteria 1995
119 Ga0395900_0571748 3300037418 Bacteria 1073
120 Ga0395898_0007959 3300037466 Bacteria 11240
121 Ga0439436_0001866 3300041404 Bacteria 6224
122 Ga0451789_1040276 3300041443 Bacteria 1550
123 Ga0451853_1730237 3300041512 Bacteria 1744
124 Ga0451853_2301065 3300041512 Bacteria 1549
125 Ga0451853_2879334 3300041512 Bacteria 6844
126 Ga0439449_0010024 3300042007 Bacteria 3584
127 Ga0439449_0011827 3300042007 Bacteria 3281
128 Ga0439457_004086 3300042014 Bacteria 3864
129 Ga0439462_0036478 3300042015 Bacteria 1308
130 Ga0450898_004467 3300042134 Bacteria 2070
131 Ga0450903_006200 3300042138 Bacteria 1992
132 Ga0450906_000641 3300042145 Bacteria 7465
133 Ga0439458_0002736 3300042157 Bacteria 4248
134 Ga0439458_0030617 3300042157 Bacteria 1281
135 Ga0450908_009811 3300042184 Bacteria 1773
136 Ga0466972_0038959 3300044658 Bacteria 2321
137 Ga0466961_0031613 3300044693 Bacteria 3403
138 Ga0453684_0037201 3300044712 Bacteria 6684
139 Ga0466970_0001487 3300044765 Bacteria 11272
140 Ga0466957_0021490 3300044842 Bacteria 3803
141 Ga0466957_0386687 3300044842 Bacteria 955
142 Ga0466960_0114458 3300044901 Bacteria 1405
143 Ga0466967_0005092 3300045976 Bacteria 9024
144 Ga0466967_0057259 3300045976 Bacteria 3440
145 Ga0495617_024835 3300046452 Bacteria 2022
146 Ga0495592_0008043 3300046454 Bacteria 7919
147 Ga0495592_0019888 3300046454 Bacteria 5105
148 Ga0495592_0071825 3300046454 Bacteria 2519
149 Ga0495603_0002450 3300046455 Bacteria 10918
150 Ga0495603_0004054 3300046455 Bacteria 8718
151 Ga0495603_0009793 3300046455 Bacteria 5798
152 Ga0495590_0021545 3300046457 Bacteria 2284
153 Ga0495629_0031463 3300046459 Bacteria 3757
154 Ga0495629_0034772 3300046459 Bacteria 3562
155 Ga0495629_0039802 3300046459 Bacteria 3307
156 Ga0495638_0095352 3300046460 Bacteria 1787
157 Ga0495651_0003776 3300046462 Bacteria 11585
158 Ga0495651_0009789 3300046462 Bacteria 7370
159 Ga0495653_0025128 3300046463 Bacteria 4791
160 Ga0495653_0172183 3300046463 Bacteria 1493
161 Ga0495580_0146930 3300046472 Bacteria 1634
162 Ga0495605_0001540 3300046474 Bacteria 14977
163 Ga0495662_0006421 3300046476 Bacteria 5870
164 Ga0495662_0022776 3300046476 Bacteria 3024
165 Ga0495662_0028387 3300046476 Bacteria 2700
166 Ga0495662_0120834 3300046476 Bacteria 1286
167 Ga0495664_0006032 3300046477 Bacteria 6680
168 Ga0495664_0078710 3300046477 Bacteria 1975
169 Ga0495594_0016770 3300046499 Bacteria 3862
170 Ga0495606_0028767 3300046507 Bacteria 3913
171 Ga0495608_0002959 3300046511 Bacteria 12149
172 Ga0495610_0103282 3300046512 Bacteria 1273
173 Ga0495618_0033830 3300046514 Bacteria 3205
174 Ga0495628_0076948 3300046516 Bacteria 2596
175 Ga0495630_0013209 3300046517 Bacteria 6006
176 Ga0495631_0002920 3300046518 Bacteria 9472
177 Ga0495632_0078277 3300046519 Bacteria 1580
178 Ga0495643_0017216 3300046522 Bacteria 4229
179 Ga0495652_0019322 3300046529 Bacteria 6070
180 Ga0495652_0032375 3300046529 Bacteria 4573
181 Ga0495640_0027489 3300046533 Bacteria 4102
182 Ga0495640_0027892 3300046533 Bacteria 4068
183 Ga0495586_0178511 3300046535 Bacteria 1201
184 Ga0495587_0001732 3300046536 Bacteria 14563
185 Ga0495587_0006073 3300046536 Bacteria 7880
186 Ga0495597_0087857 3300046542 Bacteria 1322
187 Ga0495645_0017497 3300046543 Bacteria 5134
188 Ga0495622_0055168 3300046557 Bacteria 1843
189 Ga0495622_0097748 3300046557 Bacteria 1346
190 Ga0495633_0061308 3300046558 Bacteria 1761
191 Ga0495667_0004927 3300046559 Bacteria 9027
192 Ga0495668_0015747 3300046616 Bacteria 4407
193 Ga0495634_0004732 3300046642 Bacteria 10592
194 Ga0495625_0012851 3300046660 Bacteria 6767
195 Ga0495625_0171242 3300046660 Bacteria 1450
196 Ga0495625_0260267 3300046660 Bacteria 1123
197 Ga0495625_0288107 3300046660 Bacteria 1054
198 Ga0495635_0000272 3300046663 Bacteria 33271
199 Ga0495635_0010609 3300046663 Bacteria 6449
200 Ga0495635_0281947 3300046663 Bacteria 1116
201 Ga0495588_0007885 3300046674 Bacteria 4864
202 Ga0495657_0000089 3300046675 Bacteria 81161
203 Ga0495657_0002134 3300046675 Bacteria 16801
204 Ga0495657_0004869 3300046675 Bacteria 10690
205 Ga0495657_0069534 3300046675 Bacteria 2303
206 Ga0495599_0010146 3300046678 Bacteria 5769
207 Ga0495623_0134539 3300046679 Bacteria 1476
208 Ga0495646_0006161 3300046680 Bacteria 7606
209 Ga0495658_0012165 3300046683 Bacteria 4348
210 Ga0495613_0004433 3300046689 Bacteria 10514
211 Ga0495613_0021478 3300046689 Bacteria 4810
212 Ga0495613_0024169 3300046689 Bacteria 4528
213 Ga0495613_0207357 3300046689 Bacteria 1379
214 Ga0495624_0059012 3300046690 Bacteria 2408
215 Ga0495671_0035261 3300046692 Bacteria 2541
216 Ga0495589_0041282 3300046794 Bacteria 2302
217 Ga0495589_0087240 3300046794 Bacteria 1515
218 Ga0495600_0034482 3300046809 Bacteria 3285
219 Ga0495600_0139265 3300046809 Bacteria 1575
220 Ga0495600_0153084 3300046809 Bacteria 1492
221 Ga0495581_0059741 3300047315 Bacteria 2203
222 Ga0495604_0000922 3300047317 Bacteria 24470
223 Ga0495604_0003913 3300047317 Bacteria 11857
224 Ga0495604_0004216 3300047317 Bacteria 11385
225 Ga0495604_0009988 3300047317 Bacteria 7513
226 Ga0495636_0000236 3300047318 Bacteria 21900
227 Ga0495636_0004982 3300047318 Bacteria 5209
228 Ga0495636_0040965 3300047318 Bacteria 1921
229 Ga0495674_0016011 3300047319 Bacteria 6998
230 Ga0495674_0168944 3300047319 Bacteria 1826
231 Ga0495676_0002654 3300047321 Bacteria 16004
232 Ga0495676_0033423 3300047321 Bacteria 4332
233 Ga0495676_0048106 3300047321 Bacteria 3441
234 Ga0495680_0020945 3300047322 Bacteria 5483
235 Ga0495680_0082217 3300047322 Bacteria 2430
236 Ga0495687_003722 3300047443 Bacteria 10818
237 Ga0495687_005359 3300047443 Bacteria 8200
238 Ga0495687_048969 3300047443 Bacteria 1809
239 Ga0495675_0016775 3300047444 Bacteria 4631
240 Ga0495685_005794 3300047447 Bacteria 4035
241 Ga0495685_019276 3300047447 Bacteria 2344
242 Ga0495681_0007963 3300047470 Bacteria 6692
243 Ga0495681_0100773 3300047470 Bacteria 1263
244 Ga0495681_0136480 3300047470 Bacteria 1040
245 Ga0495684_0028558 3300047471 Bacteria 4282
246 Ga0495686_0110700 3300047472 Bacteria 1647
247 Ga0495593_0016742 3300047673 Bacteria 4130
248 Ga0495602_0041390 3300048088 Bacteria 4209
249 Ga0495602_0073256 3300048088 Bacteria 2916
250 Ga0495614_0011003 3300048089 Bacteria 3981
251 Ga0495615_0028271 3300048090 Bacteria 1323
252 Ga0495626_0062985 3300048091 Bacteria 1683
253 Ga0496102_0038014 3300048905 Bacteria 4342
254 Ga0496102_0122664 3300048905 Bacteria 2428
255 Ga0496108_0029003 3300048911 Bacteria 4579
256 Ga0496108_0426331 3300048911 Bacteria 1159
257 Ga0496109_0001656 3300048912 Bacteria 18569
258 Ga0496110_0017521 3300048913 Bacteria 5992
259 Ga0496112_0045351 3300048915 Bacteria 4310
260 Ga0496112_0456091 3300048915 Bacteria 1216
261 Ga0495682_0034624 3300049460 Bacteria 1862
262 Ga0501070_0287098 3300049586 Bacteria 1342
263 Ga0501044_0018466 3300049823 Bacteria 7472
264 nmdc:mga03683_40634_c1 3300050489 Bacteria 1908
265 nmdc:mga03n38_26315_c1 3300050490 Bacteria 2401
266 nmdc:mga00v17_15694_c1 3300050491 Bacteria 4255
267 nmdc:mga0yw44_4834_c1 3300050492 Bacteria 6258
268 nmdc:mga06z11_4434_c1 3300050494 Bacteria 5525
269 nmdc:mga04h51_2584_c1 3300050495 Bacteria 4310
270 nmdc:mga06r32_156532_c1 3300050510 Bacteria 2260
271 Ga0500640_003199 3300053095 Bacteria 5645
272 Ga0500560_008602 3300053107 Bacteria 2466
273 Ga0500572_048080 3300053111 Bacteria 1262
274 Ga0500559_0018633 3300053136 Bacteria 2932
275 Ga0500573_0009702 3300053140 Bacteria 5355
276 Ga0500600_0091513 3300053149 Bacteria 1623
277 Ga0500600_0105404 3300053149 Bacteria 1480
278 Ga0590075_020953 3300059424 Bacteria 1629
279 2547412414 2547132111 Bacteria 8013147
280 2585310261 2582581313 Bacteria 10042643
281 2585316307 2582581314 Bacteria 11452267
282 2616699570 2616644814 Bacteria 11555299
283 2644267805 2643221647 Bacteria 10741251
284 2644440468 2643221678 Bacteria 9540101
285 2644627284 2643221714 Bacteria 9015452
286 2785373491 2784746768 Bacteria 10036182
287 2785374316 2784746768 Bacteria 10036182
288 2786667986 2786546132 Bacteria 10419719
289 2808845861 2808606359 Bacteria 9866990
290 2808917580 2808606375 Bacteria 9466072
291 2812353583 2811994879 Bacteria 9313447
292 2819739093 2818991472 Bacteria 10089953
293 2852642462 2852635781 Bacteria 8251373
294 2862282208 2862281513 Bacteria 9621493
295 2862389308 2862382967 Bacteria 10317375
296 2862515936 2862507626 Bacteria 9425308
297 2862575563 2862574272 Bacteria 10567477
298 2863410944 2863404153 Bacteria 9672205
299 2867437006 2867428634 Bacteria 9590268
300 2877684723 2877676314 Bacteria 9512378
301 2912723353 2912715099 Bacteria 9460473
302 2919470741 2919468124 Bacteria 9133025
303 2935392985 2935390628 Bacteria 7043367
304 2946072122 2946064051 Bacteria 8957905
305 2946079806 2946072368 Bacteria 8999607
306 2954010768 2954002825 Bacteria 9173742
307 2954389852 2954380949 Bacteria 10050426
308 2954674272 2954673503 Bacteria 9685905
309 2954689859 2954682443 Bacteria 9862841
310 2954700780 2954691527 Bacteria 10720516
311 2954706567 2954701450 Bacteria 10834262
312 2954718580 2954711539 Bacteria 10867210
313 2954728551 2954721474 Bacteria 10456478
314 2954733260 2954731030 Bacteria 10243860
315 2954747446 2954740390 Bacteria 10229294
316 2954752142 2954749733 Bacteria 10366972
317 2954766562 2954759201 Bacteria 9358192
318 3003008947 3002998708 Bacteria 11715108
319 3006497656 3006493962 Bacteria 8825450
320 8008559999 8008558824 Bacteria 10610750
321 8046354069 8046352972 Bacteria 3613806
322 8047720260 8047710418 Bacteria 11023148
323 Ga0439448_0013129
324 JGI24737J22298_10091463
325 rootH1_10040875
326 Ga0006562J51391_1056157
327 Ga0068869_100114812
328 Ga0068868_100469080
329 Ga0070669_100249650
330 Ga0070675_100254205
331 Ga0070671_100308136
332 Ga0070710_10001118
333 Ga0070708_100037207
334 Ga0070678_100550576
335 Ga0070662_100057667
336 Ga0070707_100245100
337 Ga0070707_100377783
338 Ga0070698_100000534
339 Ga0070679_100192580
340 Ga0070665_100661094
341 Ga0068852_100074050
342 Ga0068866_10210500
343 Ga0068861_100111600
344 Ga0068858_100288768
345 Ga0081455_10289465
346 Ga0081538_10000029
347 Ga0075365_10508169
348 Ga0075368_10039649
349 Ga0075363_100029750
350 Ga0075364_10023744
351 Ga0075362_10025652
352 Ga0075367_10021081
353 Ga0097621_100099999
354 Ga0075436_100308731
355 Ga0105251_10050652
356 Ga0111539_10703772
357 Ga0105245_10013108
358 Ga0114129_10306863
359 Ga0105242_10267141
360 Ga0105248_10091324
361 Ga0157369_10193154
362 Ga0157378_10190674
363 Ga0163162_10207233
364 Ga0157372_10009038
365 Ga0157372_10663082
366 Ga0163163_10743273
367 Ga0157380_10024098
368 Ga0157380_10069472
369 Ga0182008_10005073
370 Ga0182007_10001930
371 Ga0183367_1012
372 Ga0154015_1327466
373 Ga0209758_1008704
374 Ga0207426_1032808
375 Ga0207692_10000956
376 Ga0207688_10070160
377 Ga0207680_10271190
378 Ga0207647_10028000
379 Ga0207699_10186567
380 Ga0207646_10366577
381 Ga0207681_10227177
382 Ga0207650_10063809
383 Ga0207644_10048840
384 Ga0207706_10122290
385 Ga0207669_10160197
386 Ga0207689_10117296
387 Ga0207668_10076360
388 Ga0207658_10218867
389 Ga0207703_10191894
390 Ga0207639_10186823
391 Ga0207678_10046035
392 Ga0207675_100027582
393 Ga0207675_100135430
394 Ga0207683_10240779
395 Ga0209371_1022862
396 Ga0209813_10004709
397 Ga0268266_10641983
398 Ga0307517_10008153
399 Ga0307515_10001878
400 Ga0307515_10193805
401 Ga0265338_10008799
402 Ga0268256_1028502
403 Ga0307511_10000287
404 Ga0307512_10005725
405 Ga0316177_1009216
406 Ga0316176_1047534
407 Ga0314311_1237768
408 Ga0307513_10009321
409 Ga0307513_10009943
410 Ga0307509_10008280
411 Ga0307509_10008985
412 Ga0307509_10060746
413 Ga0307514_10007225
414 Ga0307514_10071838
415 Ga0307514_10084203
416 Ga0307516_10005482
417 Ga0307516_10038983
418 Ga0307413_10030153
419 Ga0307518_10064762
420 Ga0307518_10081936
421 Ga0307410_10050186
422 Ga0307410_10285593
423 Ga0307409_100137155
424 Ga0307416_100187943
425 Ga0307414_10054512
426 Ga0307414_10203768
427 Ga0307411_10017559
428 Ga0307411_10081430
429 Ga0307507_10031944
430 Ga0307507_10036267
431 Ga0307507_10065481
432 Ga0307507_10272953
433 Ga0307510_10004690
434 Ga0307510_10073620
435 Ga0307510_10143855
436 Ga0307510_10234057
437 Ga0373953_0030087
438 Ga0373937_0022407
439 Ga0373925_0000926
440 Ga0395900_0204688
441 Ga0395900_0571748
442 Ga0395898_0007959
443 Ga0439436_0001866
444 Ga0451789_1040276
445 Ga0451853_1730237
446 Ga0451853_2301065
447 Ga0451853_2879334
448 Ga0439449_0010024
449 Ga0439449_0011827
450 Ga0439457_004086
451 Ga0439462_0036478
452 Ga0450898_004467
453 Ga0450903_006200
454 Ga0450906_000641
455 Ga0439458_0002736
456 Ga0439458_0030617
457 Ga0450908_009811
458 Ga0466972_0038959
459 Ga0466961_0031613
460 Ga0453684_0037201
461 Ga0466970_0001487
462 Ga0466957_0021490
463 Ga0466957_0386687
464 Ga0466960_0114458
465 Ga0466967_0005092
466 Ga0466967_0057259
467 Ga0495617_024835
468 Ga0495592_0008043
469 Ga0495592_0019888
470 Ga0495592_0071825
471 Ga0495603_0002450
472 Ga0495603_0004054
473 Ga0495603_0009793
474 Ga0495590_0021545
475 Ga0495629_0031463
476 Ga0495629_0034772
477 Ga0495629_0039802
478 Ga0495638_0095352
479 Ga0495651_0003776
480 Ga0495651_0009789
481 Ga0495653_0025128
482 Ga0495653_0172183
483 Ga0495580_0146930
484 Ga0495605_0001540
485 Ga0495662_0006421
486 Ga0495662_0022776
487 Ga0495662_0028387
488 Ga0495662_0120834
489 Ga0495664_0006032
490 Ga0495664_0078710
491 Ga0495594_0016770
492 Ga0495606_0028767
493 Ga0495608_0002959
494 Ga0495610_0103282
495 Ga0495618_0033830
496 Ga0495628_0076948
497 Ga0495630_0013209
498 Ga0495631_0002920
499 Ga0495632_0078277
500 Ga0495643_0017216
501 Ga0495652_0019322
502 Ga0495652_0032375
503 Ga0495640_0027489
504 Ga0495640_0027892
505 Ga0495586_0178511
506 Ga0495587_0001732
507 Ga0495587_0006073
508 Ga0495597_0087857
509 Ga0495645_0017497
510 Ga0495622_0055168
511 Ga0495622_0097748
512 Ga0495633_0061308
513 Ga0495667_0004927
514 Ga0495668_0015747
515 Ga0495634_0004732
516 Ga0495625_0012851
517 Ga0495625_0171242
518 Ga0495625_0260267
519 Ga0495625_0288107
520 Ga0495635_0000272
521 Ga0495635_0010609
522 Ga0495635_0281947
523 Ga0495588_0007885
524 Ga0495657_0000089
525 Ga0495657_0002134
526 Ga0495657_0004869
527 Ga0495657_0069534
528 Ga0495599_0010146
529 Ga0495623_0134539
530 Ga0495646_0006161
531 Ga0495658_0012165
532 Ga0495613_0004433
533 Ga0495613_0021478
534 Ga0495613_0024169
535 Ga0495613_0207357
536 Ga0495624_0059012
537 Ga0495671_0035261
538 Ga0495589_0041282
539 Ga0495589_0087240
540 Ga0495600_0034482
541 Ga0495600_0139265
542 Ga0495600_0153084
543 Ga0495581_0059741
544 Ga0495604_0000922
545 Ga0495604_0003913
546 Ga0495604_0004216
547 Ga0495604_0009988
548 Ga0495636_0000236
549 Ga0495636_0004982
550 Ga0495636_0040965
551 Ga0495674_0016011
552 Ga0495674_0168944
553 Ga0495676_0002654
554 Ga0495676_0033423
555 Ga0495676_0048106
556 Ga0495680_0020945
557 Ga0495680_0082217
558 Ga0495687_003722
559 Ga0495687_005359
560 Ga0495687_048969
561 Ga0495675_0016775
562 Ga0495685_005794
563 Ga0495685_019276
564 Ga0495681_0007963
565 Ga0495681_0100773
566 Ga0495681_0136480
567 Ga0495684_0028558
568 Ga0495686_0110700
569 Ga0495593_0016742
570 Ga0495602_0041390
571 Ga0495602_0073256
572 Ga0495614_0011003
573 Ga0495615_0028271
574 Ga0495626_0062985
575 Ga0496102_0038014
576 Ga0496102_0122664
577 Ga0496108_0029003
578 Ga0496108_0426331
579 Ga0496109_0001656
580 Ga0496110_0017521
581 Ga0496112_0045351
582 Ga0496112_0456091
583 Ga0495682_0034624
584 Ga0501070_0287098
585 Ga0501044_0018466
586 nmdc:mga03683_40634_c1
587 nmdc:mga03n38_26315_c1
588 nmdc:mga00v17_15694_c1
589 nmdc:mga0yw44_4834_c1
590 nmdc:mga06z11_4434_c1
591 nmdc:mga04h51_2584_c1
592 nmdc:mga06r32_156532_c1
593 Ga0500640_003199
594 Ga0500560_008602
595 Ga0500572_048080
596 Ga0500559_0018633
597 Ga0500573_0009702
598 Ga0500600_0091513
599 Ga0500600_0105404
600 Ga0590075_020953
601 2547412414
602 2585310261
603 2585316307
604 2616699570
605 2644267805
606 2644440468
607 2644627284
608 2785373491
609 2785374316
610 2786667986
611 2808845861
612 2808917580
613 2812353583
614 2819739093
615 2852642462
616 2862282208
617 2862389308
618 2862515936
619 2862575563
620 2863410944
621 2867437006
622 2877684723
623 2912723353
624 2919470741
625 2935392985
626 2946072122
627 2946079806
628 2954010768
629 2954389852
630 2954674272
631 2954689859
632 2954700780
633 2954706567
634 2954718580
635 2954728551
636 2954733260
637 2954747446
638 2954752142
639 2954766562
640 3003008947
641 3006497656
642 8008559999
643 8046354069
644 8047720260

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03976

PPK2

Polyphosphate kinase 2 (PPK2)

43

271

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
5llf-assembly2.cif.gz_C structure of polyphosphate kinase 2 mutant d117n from francisella tularensis with polyphosphate 0.989 8 229
3czq-assembly1.cif.gz_D crystal structure of putative polyphosphate kinase 2 from sinorhizobium meliloti 0.989 8 229
5llb-assembly1.cif.gz_C structure of polyphosphate kinase 2 from francisella tularensis with amppch2ppp and polyphosphate 0.9885 9 229
4yeg-assembly2.cif.gz_D characterisation of polyphosphate kinase 2 from the intracellular pathogen francisella tularensis 0.9529 6 229
4yeg-assembly1.cif.gz_A characterisation of polyphosphate kinase 2 from the intracellular pathogen francisella tularensis 0.948 6 229
ID Description Score Start End Superfamily
3czqA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9824 8 230 3.40.50.300
4yegC00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9405 6 229 3.40.50.300
3czpB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9186 2 226 3.40.50.300
6angA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8939 9 239 3.40.50.300
3czpB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8916 9 225 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7V8G0E4-F1-model_v4 Polyphosphate:ADP phosphotransferase 0.998 11 153 GO:0016740
AF-L5NYB1-F1-model_v4 Polyphosphate kinase 2 0.9974 9 151 GO:0016301
AF-A0A2S5KTC2-F1-model_v4 ADP/GDP-polyphosphate phosphotransferase (EC 2.7.4.-) (Polyphosphate kinase PPK2) 0.9962 9 229 GO:0006793
GO:0008976
AF-A0A6B3H7W7-F1-model_v4 Polyphosphate kinase 2 0.9962 105 229 GO:0016301
AF-A0A526RPP4-F1-model_v4 ADP/GDP-polyphosphate phosphotransferase (EC 2.7.4.-) (Polyphosphate kinase PPK2) 0.996 8 222 GO:0006754
GO:0008976

Map