F406367

General Info

Members Datasets Scaffolds Average Seq Length
322 207 322 196

Family's Representative Sequence

Representative Sequence 3300005617|Ga0068859_100369476|Ga0068859_1003694762
Length 211
Sequence MDDETLDRLVEKAKSGDREAFGSIFDAYGAPIHRFIASRVSRPSDAEDLTQLVFVKALEALPRYEARGIPFGGWLFRLARNAVIDHVRTRRDHLELTAEIQRPTEDAGPEATAALRQDLDAVARALGVLTDEQREVIELRFFAGLSAREAAEAMGKQEGTIRGLQFRAIASLRRELGTQLSADAMANPVAGRGIGGLSMVEPAVRPEPSES

Samples

Sample ID Description Type Environment
1 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
21 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
35 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
36 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
37 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
38 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
39 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
52 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
53 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
54 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
55 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
56 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
57 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
60 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
61 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
62 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
63 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
64 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
113 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
114 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
119 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
120 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
121 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
122 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
123 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
124 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
125 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
126 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
127 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
129 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
130 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
131 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
132 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
133 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
134 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
135 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
136 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
139 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
140 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
141 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
142 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
143 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
144 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
145 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
146 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
147 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
148 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
149 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
150 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
153 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
154 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
155 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
156 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
157 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
158 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
159 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
160 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
161 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
162 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
167 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
168 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
169 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
170 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
171 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
172 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
173 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
174 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
175 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
176 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
179 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
181 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
183 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
184 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
185 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
186 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
187 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
188 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
189 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
190 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
191 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
192 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
194 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
195 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
196 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
197 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
198 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
199 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
200 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
201 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
202 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
203 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
204 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
205 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
206 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
207 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.31
Nodule 0
Rhizoplane 12.42
Rhizosphere 85.4
Stem 0
Stem Tuber 0
Unclassified 1.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10001707 3300003323 Unclassified 1266
2 Ga0070683_100075934 3300005329 Bacteria 3141
3 Ga0070683_101112216 3300005329 Bacteria 759
4 Ga0070680_100000035 3300005336 Bacteria 68166
5 Ga0070680_100674958 3300005336 Bacteria 889
6 Ga0068868_100891245 3300005338 Bacteria 808
7 Ga0070689_100224891 3300005340 Unclassified 1541
8 Ga0070687_100045659 3300005343 Bacteria 2238
9 Ga0070692_10245778 3300005345 Bacteria 1069
10 Ga0070671_101050410 3300005355 Unclassified 715
11 Ga0070674_100077611 3300005356 Bacteria 2365
12 Ga0070673_100157270 3300005364 Bacteria 1930
13 Ga0070673_101214398 3300005364 Bacteria 707
14 Ga0070667_100548771 3300005367 Unclassified 1062
15 Ga0070701_10169602 3300005438 Unclassified 1270
16 Ga0070705_100208286 3300005440 Bacteria 1346
17 Ga0070705_100493589 3300005440 Bacteria 928
18 Ga0070694_100251707 3300005444 Bacteria 1336
19 Ga0070708_100001099 3300005445 Bacteria 20622
20 Ga0070708_100008124 3300005445 Bacteria 8415
21 Ga0070708_100062009 3300005445 Bacteria 3342
22 Ga0070708_100180616 3300005445 Bacteria 1972
23 Ga0068867_100300489 3300005459 Bacteria 1323
24 Ga0070706_100016369 3300005467 Bacteria 6851
25 Ga0070706_100078122 3300005467 Bacteria 3064
26 Ga0070706_100261218 3300005467 Bacteria 1616
27 Ga0070707_100032053 3300005468 Bacteria 5006
28 Ga0070707_100236905 3300005468 Bacteria 1776
29 Ga0070707_100254554 3300005468 Bacteria 1709
30 Ga0070698_100006336 3300005471 Bacteria 12851
31 Ga0070698_100013187 3300005471 Bacteria 8745
32 Ga0070698_100083834 3300005471 Bacteria 3176
33 Ga0070698_100095108 3300005471 Bacteria 2958
34 Ga0070699_100002806 3300005518 Bacteria 15541
35 Ga0070699_100309116 3300005518 Bacteria 1419
36 Ga0070679_100240006 3300005530 Bacteria 1770
37 Ga0070684_100655753 3300005535 Unclassified 977
38 Ga0070697_100065605 3300005536 Bacteria 2967
39 Ga0070697_100086423 3300005536 Unclassified 2588
40 Ga0070697_100130248 3300005536 Bacteria 2109
41 Ga0070697_100165992 3300005536 Bacteria 1867
42 Ga0070697_100312660 3300005536 Bacteria 1352
43 Ga0070672_100799445 3300005543 Unclassified 830
44 Ga0070686_100018656 3300005544 Bacteria 4078
45 Ga0070686_100354326 3300005544 Bacteria 1103
46 Ga0070686_100421514 3300005544 Unclassified 1020
47 Ga0070695_100177849 3300005545 Bacteria 1505
48 Ga0070695_100281124 3300005545 Bacteria 1223
49 Ga0070695_100970676 3300005545 Bacteria 690
50 Ga0070696_100001594 3300005546 Bacteria 14878
51 Ga0070696_100059410 3300005546 Bacteria 2672
52 Ga0070696_100153058 3300005546 Bacteria 1694
53 Ga0070696_100207721 3300005546 Bacteria 1464
54 Ga0070693_100366059 3300005547 Bacteria 991
55 Ga0070693_100383702 3300005547 Bacteria 970
56 Ga0070693_100553286 3300005547 Unclassified 824
57 Ga0070704_100271410 3300005549 Bacteria 1401
58 Ga0070704_100496835 3300005549 Unclassified 1058
59 Ga0068855_100834248 3300005563 Bacteria 978
60 Ga0068854_100416045 3300005578 Bacteria 1116
61 Ga0070702_100578448 3300005615 Bacteria 838
62 Ga0070702_100635935 3300005615 Bacteria 805
63 Ga0068852_100740186 3300005616 Bacteria 995
64 Ga0068859_100369476 3300005617 Bacteria 1530
65 Ga0068864_100354640 3300005618 Unclassified 1385
66 Ga0068866_10354927 3300005718 Bacteria 933
67 Ga0068863_100135449 3300005841 Bacteria 2353
68 Ga0068858_100101593 3300005842 Bacteria 2682
69 Ga0068858_100406340 3300005842 Bacteria 1309
70 Ga0068862_100543008 3300005844 Bacteria 1109
71 Ga0075428_100099966 3300006844 Bacteria 3163
72 Ga0075431_101081986 3300006847 Bacteria 767
73 Ga0075433_10273257 3300006852 Bacteria 1498
74 Ga0075429_100130003 3300006880 Bacteria 2203
75 Ga0068865_100723413 3300006881 Bacteria 853
76 Ga0075436_100067149 3300006914 Bacteria 2479
77 Ga0097620_100369444 3300006931 Bacteria 1530
78 Ga0075435_100080987 3300007076 Bacteria 2667
79 Ga0105245_10237405 3300009098 Unclassified 1766
80 Ga0105245_11068783 3300009098 Bacteria 853
81 Ga0114129_10026146 3300009147 Bacteria 8266
82 Ga0114129_10752754 3300009147 Bacteria 1247
83 Ga0105243_10154881 3300009148 Bacteria 1970
84 Ga0105243_11042529 3300009148 Bacteria 823
85 Ga0105241_10753779 3300009174 Bacteria 893
86 Ga0105242_10068842 3300009176 Bacteria 2930
87 Ga0105248_10368901 3300009177 Bacteria 1616
88 Ga0105238_10560881 3300009551 Bacteria 1147
89 Ga0105249_10128450 3300009553 Bacteria 2417
90 Ga0105249_10417995 3300009553 Bacteria 1374
91 Ga0105249_11230734 3300009553 Bacteria 820
92 Ga0105239_10172219 3300010375 Bacteria 2421
93 Ga0105239_10421418 3300010375 Bacteria 1512
94 Ga0105239_10997858 3300010375 Unclassified 963
95 Ga0157374_10717937 3300013296 Unclassified 1013
96 Ga0163162_10310660 3300013306 Bacteria 1709
97 Ga0163162_10497218 3300013306 Unclassified 1350
98 Ga0157375_10238379 3300013308 Bacteria 1978
99 Ga0163163_10014831 3300014325 Bacteria 7177
100 Ga0163163_10060418 3300014325 Bacteria 3753
101 Ga0163163_10176505 3300014325 Bacteria 2183
102 Ga0163163_10741950 3300014325 Bacteria 1045
103 Ga0157380_10318160 3300014326 Bacteria 1441
104 Ga0157380_10363331 3300014326 Unclassified 1359
105 Ga0157377_10071069 3300014745 Unclassified 2012
106 Ga0157377_10338985 3300014745 Unclassified 1005
107 Ga0157379_10491008 3300014968 Bacteria 1137
108 Ga0157376_10104395 3300014969 Bacteria 2483
109 Ga0157376_10409683 3300014969 Unclassified 1313
110 Ga0157376_11457099 3300014969 Bacteria 717
111 Ga0163161_10197877 3300017792 Bacteria 1547
112 Ga0207656_10231924 3300025321 Bacteria 900
113 Ga0207642_10056422 3300025899 Bacteria 1802
114 Ga0207710_10252401 3300025900 Bacteria 882
115 Ga0207688_10051057 3300025901 Bacteria 2316
116 Ga0207643_10006055 3300025908 Bacteria 6463
117 Ga0207684_10019266 3300025910 Bacteria 5839
118 Ga0207660_10000003 3300025917 Bacteria 675759
119 Ga0207660_10159053 3300025917 Bacteria 1741
120 Ga0207660_10171498 3300025917 Bacteria 1680
121 Ga0207662_10016142 3300025918 Bacteria 4211
122 Ga0207662_10043263 3300025918 Bacteria 2656
123 Ga0207657_10097177 3300025919 Bacteria 2449
124 Ga0207649_10144206 3300025920 Bacteria 1633
125 Ga0207652_10521890 3300025921 Bacteria 1069
126 Ga0207646_10011336 3300025922 Bacteria 8650
127 Ga0207681_10105109 3300025923 Bacteria 2044
128 Ga0207650_10201892 3300025925 Bacteria 1593
129 Ga0207650_10787695 3300025925 Bacteria 805
130 Ga0207659_10008676 3300025926 Bacteria 6324
131 Ga0207687_10110471 3300025927 Bacteria 2039
132 Ga0207687_10283871 3300025927 Bacteria 1328
133 Ga0207700_10164960 3300025928 Bacteria 1843
134 Ga0207644_10283113 3300025931 Unclassified 1332
135 Ga0207690_10091499 3300025932 Bacteria 2150
136 Ga0207690_10803478 3300025932 Unclassified 777
137 Ga0207706_10045058 3300025933 Bacteria 3908
138 Ga0207706_10206948 3300025933 Bacteria 1720
139 Ga0207686_10141153 3300025934 Bacteria 1665
140 Ga0207709_10024651 3300025935 Bacteria 3437
141 Ga0207670_10492243 3300025936 Bacteria 994
142 Ga0207670_10742066 3300025936 Bacteria 815
143 Ga0207669_10041655 3300025937 Bacteria 2675
144 Ga0207669_10160883 3300025937 Bacteria 1586
145 Ga0207704_10047666 3300025938 Bacteria 2563
146 Ga0207704_10684611 3300025938 Bacteria 847
147 Ga0207691_10064433 3300025940 Bacteria 3320
148 Ga0207711_10302172 3300025941 Bacteria 1476
149 Ga0207689_10035164 3300025942 Bacteria 4162
150 Ga0207689_10209590 3300025942 Bacteria 1610
151 Ga0207689_10271083 3300025942 Bacteria 1405
152 Ga0207661_10105476 3300025944 Bacteria 2375
153 Ga0207661_10173469 3300025944 Bacteria 1878
154 Ga0207667_10560466 3300025949 Bacteria 1155
155 Ga0207651_10705409 3300025960 Bacteria 889
156 Ga0207712_10073140 3300025961 Bacteria 2471
157 Ga0207712_10292523 3300025961 Bacteria 1333
158 Ga0207668_10562301 3300025972 Bacteria 989
159 Ga0207640_10564953 3300025981 Bacteria 958
160 Ga0207677_10084121 3300026023 Bacteria 2292
161 Ga0207677_10812602 3300026023 Bacteria 838
162 Ga0207703_10023204 3300026035 Bacteria 4873
163 Ga0207703_10150235 3300026035 Bacteria 2030
164 Ga0207639_10046013 3300026041 Bacteria 3290
165 Ga0207678_10084756 3300026067 Bacteria 2710
166 Ga0207708_10011971 3300026075 Bacteria 6463
167 Ga0207641_10199983 3300026088 Bacteria 1842
168 Ga0207641_10433568 3300026088 Unclassified 1268
169 Ga0207648_10003245 3300026089 Bacteria 17109
170 Ga0207648_10598293 3300026089 Bacteria 1016
171 Ga0207648_10646136 3300026089 Bacteria 977
172 Ga0207676_10327075 3300026095 Bacteria 1409
173 Ga0207674_10010824 3300026116 Bacteria 10284
174 Ga0207675_100051598 3300026118 Bacteria 3838
175 Ga0207675_100198360 3300026118 Bacteria 1927
176 Ga0207675_100555103 3300026118 Bacteria 1148
177 Ga0207683_10155087 3300026121 Bacteria 2068
178 Ga0207683_10188967 3300026121 Bacteria 1869
179 Ga0207698_10709230 3300026142 Bacteria 1002
180 Ga0210000_1036359 3300027462 Bacteria 777
181 Ga0207428_10028384 3300027907 Bacteria 4649
182 Ga0207428_10398584 3300027907 Bacteria 1008
183 Ga0268266_10431316 3300028379 Bacteria 1250
184 Ga0268265_10369282 3300028380 Bacteria 1316
185 Ga0268265_10891376 3300028380 Bacteria 873
186 Ga0268264_10160644 3300028381 Bacteria 2024
187 Ga0307407_10113135 3300031903 Bacteria 1708
188 Ga0307409_100509896 3300031995 Bacteria 1173
189 Ga0307409_100678462 3300031995 Bacteria 1027
190 Ga0307416_100003370 3300032002 Bacteria 9366
191 Ga0307415_100021502 3300032126 Bacteria 3966
192 Ga0373938_0033945 3300034957 Bacteria 1106
193 Ga0373949_0035529 3300035090 Bacteria 1206
194 Ga0373939_0007419 3300035114 Bacteria 2664
195 Ga0373962_0155995 3300035242 Bacteria 750
196 Ga0373931_0053110 3300035691 Bacteria 2162
197 Ga0373935_0290153 3300035692 Unclassified 1154
198 Ga0373937_0371867 3300036401 Bacteria 1355
199 Ga0373937_0742722 3300036401 Bacteria 929
200 Ga0395898_0859745 3300037466 Unclassified 846
201 Ga0395901_0267887 3300038443 Unclassified 1777
202 Ga0395901_0710097 3300038443 Bacteria 1002
203 Ga0439466_0027126 3300041411 Bacteria 1985
204 Ga0451798_0317688 3300041458 Unclassified 1478
205 Ga0451839_0375955 3300041496 Unclassified 1040
206 Ga0451847_0623952 3300041503 Bacteria 583
207 Ga0451849_1171583 3300041505 Bacteria 774
208 Ga0451853_0997144 3300041512 Unclassified 920
209 Ga0451853_3342853 3300041512 Bacteria 1431
210 Ga0439448_0203565 3300042005 Bacteria 694
211 Ga0453683_0120521 3300044673 Bacteria 1651
212 Ga0466960_0055857 3300044901 Bacteria 1921
213 Ga0451576_0338985 3300045051 Bacteria 1574
214 Ga0495592_0503249 3300046454 Unclassified 751
215 Ga0495653_0458964 3300046463 Unclassified 800
216 Ga0495582_0089682 3300046473 Unclassified 1714
217 Ga0495664_0451751 3300046477 Unclassified 769
218 Ga0495596_0363480 3300046500 Bacteria 564
219 Ga0495608_0302093 3300046511 Bacteria 991
220 Ga0495618_0249853 3300046514 Unclassified 1113
221 Ga0495620_0249987 3300046515 Bacteria 676
222 Ga0495630_0240210 3300046517 Unclassified 1384
223 Ga0495652_0347510 3300046529 Unclassified 1064
224 Ga0495587_0239100 3300046536 Unclassified 1022
225 Ga0495667_0187925 3300046559 Unclassified 1324
226 Ga0495656_0048056 3300046615 Bacteria 1812
227 Ga0495623_0367839 3300046679 Unclassified 780
228 Ga0495658_0626139 3300046683 Unclassified 689
229 Ga0495600_0293863 3300046809 Unclassified 1026
230 Ga0495604_0187527 3300047317 Unclassified 1443
231 Ga0495674_0094490 3300047319 Unclassified 2550
232 Ga0495676_0184300 3300047321 Unclassified 1461
233 Ga0495684_0213234 3300047471 Bacteria 1419
234 Ga0495593_0257491 3300047673 Unclassified 874
235 Ga0496100_0006676 3300048903 Bacteria 6312
236 Ga0496101_0087109 3300048904 Bacteria 2317
237 Ga0496101_0241965 3300048904 Bacteria 1404
238 Ga0496101_0537371 3300048904 Bacteria 924
239 Ga0496101_0562598 3300048904 Bacteria 902
240 Ga0496102_0971104 3300048905 Bacteria 770
241 Ga0496103_0366998 3300048906 Bacteria 925
242 Ga0496103_0432210 3300048906 Bacteria 845
243 Ga0496104_0027142 3300048907 Bacteria 5296
244 Ga0496104_0047027 3300048907 Bacteria 4066
245 Ga0496104_0077609 3300048907 Bacteria 3165
246 Ga0496105_0031342 3300048908 Bacteria 4359
247 Ga0496105_0086815 3300048908 Bacteria 2585
248 Ga0496106_0031666 3300048909 Bacteria 3941
249 Ga0496107_0136841 3300048910 Bacteria 1810
250 Ga0496107_0179860 3300048910 Bacteria 1570
251 Ga0496108_0036842 3300048911 Bacteria 4071
252 Ga0496108_0093350 3300048911 Unclassified 2560
253 Ga0496108_0649357 3300048911 Bacteria 917
254 Ga0496109_0021117 3300048912 Bacteria 5756
255 Ga0496109_0043995 3300048912 Bacteria 4049
256 Ga0496109_0057469 3300048912 Bacteria 3551
257 Ga0496109_0214087 3300048912 Bacteria 1812
258 Ga0496109_0326541 3300048912 Bacteria 1448
259 Ga0496109_0344572 3300048912 Bacteria 1407
260 Ga0496110_0015819 3300048913 Bacteria 6290
261 Ga0496110_0028483 3300048913 Bacteria 4798
262 Ga0496110_0474559 3300048913 Bacteria 1139
263 Ga0496111_0146259 3300048914 Bacteria 1752
264 Ga0496111_0194330 3300048914 Bacteria 1508
265 Ga0496111_0510215 3300048914 Bacteria 885
266 Ga0496112_0111831 3300048915 Bacteria 2701
267 Ga0496112_0833394 3300048915 Bacteria 846
268 Ga0496112_0835205 3300048915 Bacteria 845
269 Ga0496113_0019924 3300048916 Bacteria 4704
270 Ga0496113_0088501 3300048916 Bacteria 2382
271 Ga0496113_0226866 3300048916 Bacteria 1489
272 Ga0496114_0223439 3300048917 Bacteria 1653
273 Ga0496114_0924213 3300048917 Bacteria 754
274 Ga0501031_0556521 3300049568 Bacteria 739
275 Ga0501033_0503418 3300049570 Bacteria 838
276 Ga0501036_0242961 3300049572 Bacteria 1510
277 Ga0501038_0269427 3300049574 Bacteria 1343
278 Ga0501038_0520583 3300049574 Bacteria 908
279 Ga0501041_0214929 3300049577 Bacteria 1206
280 Ga0501042_1208726 3300049578 Bacteria 551
281 Ga0501046_0364182 3300049580 Bacteria 1048
282 Ga0501067_0480576 3300049583 Bacteria 694
283 Ga0501068_0028177 3300049584 Bacteria 3320
284 Ga0501068_0049550 3300049584 Bacteria 2537
285 Ga0501069_0020117 3300049585 Bacteria 3613
286 Ga0501069_0571982 3300049585 Bacteria 677
287 Ga0501075_0269603 3300049591 Bacteria 1297
288 Ga0501075_0410590 3300049591 Unclassified 1032
289 Ga0501076_0023640 3300049592 Bacteria 4740
290 Ga0501076_0238888 3300049592 Bacteria 1486
291 Ga0501076_0440027 3300049592 Bacteria 1073
292 Ga0501079_0077351 3300049741 Bacteria 2574
293 Ga0501079_0113098 3300049741 Bacteria 2110
294 Ga0501080_0160267 3300049742 Bacteria 2078
295 Ga0501081_0121968 3300049743 Bacteria 1857
296 Ga0501083_0325095 3300049744 Bacteria 1000
297 Ga0501035_0366238 3300049822 Bacteria 1204
298 Ga0501045_0093260 3300049824 Bacteria 2227
299 Ga0501045_0116884 3300049824 Bacteria 1979
300 nmdc:mga0yw44_219437_c1 3300050492 Bacteria 1260
301 nmdc:mga05p37_1144_c1 3300050507 Bacteria 30508
302 nmdc:mga05p37_217144_c1 3300050507 Bacteria 2309
303 nmdc:mga05p37_704599_c1 3300050507 Unclassified 1121
304 nmdc:mga09592_157440_c1 3300050508 Bacteria 1961
305 nmdc:mga08y16_201034_c1 3300050511 Bacteria 2065
306 nmdc:mga08y16_61221_c1 3300050511 Bacteria 3931
307 nmdc:mga08y16_88798_c1 3300050511 Bacteria 3221
308 nmdc:mga0n895_243389_c1 3300050512 Bacteria 1826
309 nmdc:mga0rr50_124130_c1 3300050513 Bacteria 2059
310 nmdc:mga0rr50_496248_c1 3300050513 Bacteria 1038
311 nmdc:mga08x19_132699_c1 3300050514 Bacteria 1676
312 nmdc:mga08x19_340422_c1 3300050514 Bacteria 1046
313 nmdc:mga0a205_224373_c1 3300050515 Bacteria 1764
314 nmdc:mga0a205_255044_c1 3300050515 Bacteria 1633
315 Ga0495601_0021213 3300053077 Bacteria 3977
316 Ga0495595_0148543 3300053084 Unclassified 1152
317 Ga0495619_0043743 3300053085 Unclassified 2937
318 Ga0501084_0106557 3300054114 Bacteria 2355
319 Ga0501084_0712118 3300054114 Bacteria 846
320 Ga0501082_0900743 3300060353 Bacteria 774
321 Ga0530510_0030609 3300061734 Bacteria 3866
322 Ga0530510_0871513 3300061734 Bacteria 688

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025942 Ga0207689_10035164 Ga0207689_100351645 149
2 3300025960 Ga0207651_10705409 Ga0207651_107054091 149
3 3300005549 Ga0070704_100271410 Ga0070704_1002714102 156
4 3300036401 Ga0373937_0742722 Ga0373937_0742722_280_897 156
5 3300050512 nmdc:mga0n895_243389_c1 nmdc:mga0n895_243389_c1_739_1344 156
6 3300050513 nmdc:mga0rr50_496248_c1 nmdc:mga0rr50_496248_c1_15_620 156
7 3300050514 nmdc:mga08x19_132699_c1 nmdc:mga08x19_132699_c1_595_1200 156
8 3300050515 nmdc:mga0a205_255044_c1 nmdc:mga0a205_255044_c1_247_852 156
9 3300005445 Ga0070708_100008124 Ga0070708_1000081242 157
10 3300005467 Ga0070706_100016369 Ga0070706_1000163692 157
11 3300005545 Ga0070695_100177849 Ga0070695_1001778492 157
12 3300009147 Ga0114129_10752754 Ga0114129_107527542 157
13 3300009176 Ga0105242_10068842 Ga0105242_100688423 157
14 3300025910 Ga0207684_10019266 Ga0207684_100192662 157
15 3300025922 Ga0207646_10011336 Ga0207646_100113362 157
16 3300044673 Ga0453683_0120521 Ga0453683_0120521_910_1509 157
17 3300045051 Ga0451576_0338985 Ga0451576_0338985_664_1263 157
18 3300048906 Ga0496103_0366998 Ga0496103_0366998_14_607 157
19 3300005471 Ga0070698_100006336 Ga0070698_1000063365 158
20 3300005518 Ga0070699_100002806 Ga0070699_1000028064 158
21 3300007076 Ga0075435_100080987 Ga0075435_1000809872 158
22 3300005468 Ga0070707_100032053 Ga0070707_1000320535 159
23 3300005471 Ga0070698_100083834 Ga0070698_1000838344 159
24 3300005536 Ga0070697_100065605 Ga0070697_1000656052 159
25 3300005546 Ga0070696_100207721 Ga0070696_1002077211 159
26 3300005563 Ga0068855_100834248 Ga0068855_1008342482 159
27 3300025927 Ga0207687_10283871 Ga0207687_102838712 159
28 3300025934 Ga0207686_10141153 Ga0207686_101411532 159
29 3300035090 Ga0373949_0035529 Ga0373949_0035529_392_991 159
30 3300049578 Ga0501042_1208726 Ga0501042_1208726_22_540 159
31 3300035692 Ga0373935_0290153 Ga0373935_0290153_609_1142 161
32 3300041503 Ga0451847_0623952 Ga0451847_0623952_10_543 161
33 3300005467 Ga0070706_100078122 Ga0070706_1000781222 162
34 3300005468 Ga0070707_100236905 Ga0070707_1002369052 162
35 3300005471 Ga0070698_100013187 Ga0070698_1000131872 162
36 3300046500 Ga0495596_0363480 Ga0495596_0363480_29_550 162
37 3300026089 Ga0207648_10598293 Ga0207648_105982931 169
38 3300005546 Ga0070696_100001594 Ga0070696_10000159415 171
39 3300049570 Ga0501033_0503418 Ga0501033_0503418_16_615 171
40 3300049572 Ga0501036_0242961 Ga0501036_0242961_863_1462 171
41 3300049574 Ga0501038_0520583 Ga0501038_0520583_54_653 171
42 3300049580 Ga0501046_0364182 Ga0501046_0364182_87_686 171
43 3300049592 Ga0501076_0238888 Ga0501076_0238888_669_1268 171
44 3300049592 Ga0501076_0440027 Ga0501076_0440027_106_705 171
45 3300049743 Ga0501081_0121968 Ga0501081_0121968_151_750 171
46 3300049824 Ga0501045_0093260 Ga0501045_0093260_1578_2177 171
47 3300054114 Ga0501084_0712118 Ga0501084_0712118_44_643 171
48 3300061734 Ga0530510_0030609 Ga0530510_0030609_3239_3838 171
49 3300049584 Ga0501068_0049550 Ga0501068_0049550_631_1209 172
50 3300027462 Ga0210000_1036359 Ga0210000_10363591 176
51 3300014326 Ga0157380_10318160 Ga0157380_103181601 177
52 3300049568 Ga0501031_0556521 Ga0501031_0556521_91_681 177
53 3300044901 Ga0466960_0055857 Ga0466960_0055857_483_1076 178
54 3300048915 Ga0496112_0833394 Ga0496112_0833394_174_779 178
55 3300005546 Ga0070696_100153058 Ga0070696_1001530582 179
56 3300010375 Ga0105239_10421418 Ga0105239_104214182 179
57 3300005445 Ga0070708_100001099 Ga0070708_1000010996 180
58 3300005336 Ga0070680_100000035 Ga0070680_10000003520 181
59 3300005718 Ga0068866_10354927 Ga0068866_103549272 181
60 3300025917 Ga0207660_10000003 Ga0207660_10000003434 181
61 3300005467 Ga0070706_100261218 Ga0070706_1002612182 182
62 3300005468 Ga0070707_100254554 Ga0070707_1002545542 182
63 3300010375 Ga0105239_10172219 Ga0105239_101722193 182
64 3300025933 Ga0207706_10206948 Ga0207706_102069482 182
65 3300026118 Ga0207675_100555103 Ga0207675_1005551032 182
66 3300006852 Ga0075433_10273257 Ga0075433_102732571 183
67 3300049741 Ga0501079_0077351 Ga0501079_0077351_1978_2550 183
68 3300054114 Ga0501084_0106557 Ga0501084_0106557_1739_2311 183
69 3300060353 Ga0501082_0900743 Ga0501082_0900743_165_755 183
70 3300061734 Ga0530510_0871513 Ga0530510_0871513_70_642 183
71 3300005329 Ga0070683_100075934 Ga0070683_1000759342 184
72 3300005343 Ga0070687_100045659 Ga0070687_1000456593 184
73 3300005345 Ga0070692_10245778 Ga0070692_102457781 184
74 3300005535 Ga0070684_100655753 Ga0070684_1006557532 184
75 3300005544 Ga0070686_100018656 Ga0070686_1000186564 184
76 3300005547 Ga0070693_100366059 Ga0070693_1003660592 184
77 3300005616 Ga0068852_100740186 Ga0068852_1007401862 184
78 3300005841 Ga0068863_100135449 Ga0068863_1001354494 184
79 3300005842 Ga0068858_100406340 Ga0068858_1004063402 184
80 3300006881 Ga0068865_100723413 Ga0068865_1007234132 184
81 3300006914 Ga0075436_100067149 Ga0075436_1000671492 184
82 3300025918 Ga0207662_10043263 Ga0207662_100432634 184
83 3300025938 Ga0207704_10684611 Ga0207704_106846112 184
84 3300025944 Ga0207661_10105476 Ga0207661_101054762 184
85 3300026088 Ga0207641_10199983 Ga0207641_101999832 184
86 3300026142 Ga0207698_10709230 Ga0207698_107092302 184
87 3300005471 Ga0070698_100095108 Ga0070698_1000951083 185
88 3300006844 Ga0075428_100099966 Ga0075428_1000999662 185
89 3300006847 Ga0075431_101081986 Ga0075431_1010819862 185
90 3300006880 Ga0075429_100130003 Ga0075429_1001300033 185
91 3300009147 Ga0114129_10026146 Ga0114129_100261464 185
92 3300009551 Ga0105238_10560881 Ga0105238_105608812 185
93 3300041411 Ga0439466_0027126 Ga0439466_0027126_161_754 185
94 3300041505 Ga0451849_1171583 Ga0451849_1171583_152_745 185
95 3300041512 Ga0451853_3342853 Ga0451853_3342853_729_1322 185
96 3300048903 Ga0496100_0006676 Ga0496100_0006676_3942_4535 185
97 3300048904 Ga0496101_0087109 Ga0496101_0087109_68_661 185
98 3300048906 Ga0496103_0432210 Ga0496103_0432210_83_676 185
99 3300048907 Ga0496104_0047027 Ga0496104_0047027_112_705 185
100 3300048908 Ga0496105_0031342 Ga0496105_0031342_3070_3663 185
101 3300048910 Ga0496107_0136841 Ga0496107_0136841_1042_1635 185
102 3300048911 Ga0496108_0036842 Ga0496108_0036842_68_661 185
103 3300048912 Ga0496109_0021117 Ga0496109_0021117_1067_1660 185
104 3300048913 Ga0496110_0028483 Ga0496110_0028483_3141_3734 185
105 3300048914 Ga0496111_0146259 Ga0496111_0146259_1008_1601 185
106 3300049574 Ga0501038_0269427 Ga0501038_0269427_433_1029 185
107 3300049577 Ga0501041_0214929 Ga0501041_0214929_335_931 185
108 3300049585 Ga0501069_0571982 Ga0501069_0571982_20_616 185
109 3300049592 Ga0501076_0023640 Ga0501076_0023640_3879_4475 185
110 3300049741 Ga0501079_0113098 Ga0501079_0113098_1010_1606 185
111 3300049742 Ga0501080_0160267 Ga0501080_0160267_732_1328 185
112 3300049744 Ga0501083_0325095 Ga0501083_0325095_348_944 185
113 3300049822 Ga0501035_0366238 Ga0501035_0366238_229_825 185
114 3300049824 Ga0501045_0116884 Ga0501045_0116884_925_1521 185
115 3300050507 nmdc:mga05p37_1144_c1 nmdc:mga05p37_1144_c1_21760_22338 185
116 3300050508 nmdc:mga09592_157440_c1 nmdc:mga09592_157440_c1_977_1555 185
117 3300005329 Ga0070683_101112216 Ga0070683_1011122161 186
118 3300005338 Ga0068868_100891245 Ga0068868_1008912451 186
119 3300005355 Ga0070671_101050410 Ga0070671_1010504101 186
120 3300005364 Ga0070673_101214398 Ga0070673_1012143981 186
121 3300005367 Ga0070667_100548771 Ga0070667_1005487712 186
122 3300005440 Ga0070705_100208286 Ga0070705_1002082861 186
123 3300005543 Ga0070672_100799445 Ga0070672_1007994451 186
124 3300005544 Ga0070686_100354326 Ga0070686_1003543262 186
125 3300005545 Ga0070695_100281124 Ga0070695_1002811242 186
126 3300005547 Ga0070693_100553286 Ga0070693_1005532861 186
127 3300005578 Ga0068854_100416045 Ga0068854_1004160452 186
128 3300005618 Ga0068864_100354640 Ga0068864_1003546402 186
129 3300005844 Ga0068862_100543008 Ga0068862_1005430082 186
130 3300009098 Ga0105245_10237405 Ga0105245_102374052 186
131 3300009098 Ga0105245_11068783 Ga0105245_110687831 186
132 3300009148 Ga0105243_11042529 Ga0105243_110425292 186
133 3300009553 Ga0105249_10128450 Ga0105249_101284501 186
134 3300009553 Ga0105249_11230734 Ga0105249_112307341 186
135 3300010375 Ga0105239_10997858 Ga0105239_109978582 186
136 3300013296 Ga0157374_10717937 Ga0157374_107179372 186
137 3300013306 Ga0163162_10497218 Ga0163162_104972182 186
138 3300013308 Ga0157375_10238379 Ga0157375_102383792 186
139 3300014325 Ga0163163_10176505 Ga0163163_101765052 186
140 3300014745 Ga0157377_10071069 Ga0157377_100710692 186
141 3300014969 Ga0157376_10409683 Ga0157376_104096832 186
142 3300014969 Ga0157376_11457099 Ga0157376_114570991 186
143 3300025928 Ga0207700_10164960 Ga0207700_101649602 186
144 3300025931 Ga0207644_10283113 Ga0207644_102831132 186
145 3300025932 Ga0207690_10803478 Ga0207690_108034782 186
146 3300025942 Ga0207689_10271083 Ga0207689_102710833 186
147 3300025972 Ga0207668_10562301 Ga0207668_105623012 186
148 3300026023 Ga0207677_10812602 Ga0207677_108126021 186
149 3300026088 Ga0207641_10433568 Ga0207641_104335682 186
150 3300026089 Ga0207648_10646136 Ga0207648_106461362 186
151 3300026121 Ga0207683_10188967 Ga0207683_101889672 186
152 3300028380 Ga0268265_10891376 Ga0268265_108913762 186
153 3300036401 Ga0373937_0371867 Ga0373937_0371867_559_1155 186
154 3300041458 Ga0451798_0317688 Ga0451798_0317688_158_754 186
155 3300041496 Ga0451839_0375955 Ga0451839_0375955_218_814 186
156 3300046454 Ga0495592_0503249 Ga0495592_0503249_123_719 186
157 3300046463 Ga0495653_0458964 Ga0495653_0458964_166_762 186
158 3300046473 Ga0495582_0089682 Ga0495582_0089682_931_1527 186
159 3300046477 Ga0495664_0451751 Ga0495664_0451751_113_709 186
160 3300046511 Ga0495608_0302093 Ga0495608_0302093_147_743 186
161 3300046514 Ga0495618_0249853 Ga0495618_0249853_278_874 186
162 3300046517 Ga0495630_0240210 Ga0495630_0240210_412_1008 186
163 3300046529 Ga0495652_0347510 Ga0495652_0347510_94_690 186
164 3300046536 Ga0495587_0239100 Ga0495587_0239100_77_673 186
165 3300046559 Ga0495667_0187925 Ga0495667_0187925_628_1224 186
166 3300046615 Ga0495656_0048056 Ga0495656_0048056_353_949 186
167 3300046679 Ga0495623_0367839 Ga0495623_0367839_119_715 186
168 3300046683 Ga0495658_0626139 Ga0495658_0626139_35_631 186
169 3300046809 Ga0495600_0293863 Ga0495600_0293863_42_638 186
170 3300047317 Ga0495604_0187527 Ga0495604_0187527_51_647 186
171 3300047319 Ga0495674_0094490 Ga0495674_0094490_222_818 186
172 3300047321 Ga0495676_0184300 Ga0495676_0184300_518_1114 186
173 3300047471 Ga0495684_0213234 Ga0495684_0213234_716_1312 186
174 3300047673 Ga0495593_0257491 Ga0495593_0257491_253_849 186
175 3300048907 Ga0496104_0077609 Ga0496104_0077609_824_1420 186
176 3300048911 Ga0496108_0093350 Ga0496108_0093350_1894_2490 186
177 3300048912 Ga0496109_0326541 Ga0496109_0326541_695_1291 186
178 3300048915 Ga0496112_0111831 Ga0496112_0111831_932_1528 186
179 3300048915 Ga0496112_0835205 Ga0496112_0835205_215_811 186
180 3300048916 Ga0496113_0088501 Ga0496113_0088501_737_1333 186
181 3300050513 nmdc:mga0rr50_124130_c1 nmdc:mga0rr50_124130_c1_1385_1984 186
182 3300050514 nmdc:mga08x19_340422_c1 nmdc:mga08x19_340422_c1_428_1027 186
183 3300053077 Ga0495601_0021213 Ga0495601_0021213_1317_1913 186
184 3300053084 Ga0495595_0148543 Ga0495595_0148543_374_970 186
185 3300053085 Ga0495619_0043743 Ga0495619_0043743_2018_2614 186
186 3300005356 Ga0070674_100077611 Ga0070674_1000776112 187
187 3300005364 Ga0070673_100157270 Ga0070673_1001572703 187
188 3300005440 Ga0070705_100493589 Ga0070705_1004935891 187
189 3300005444 Ga0070694_100251707 Ga0070694_1002517072 187
190 3300005445 Ga0070708_100062009 Ga0070708_1000620093 187
191 3300005445 Ga0070708_100180616 Ga0070708_1001806162 187
192 3300005459 Ga0068867_100300489 Ga0068867_1003004892 187
193 3300005518 Ga0070699_100309116 Ga0070699_1003091162 187
194 3300005536 Ga0070697_100130248 Ga0070697_1001302482 187
195 3300005536 Ga0070697_100165992 Ga0070697_1001659923 187
196 3300005536 Ga0070697_100312660 Ga0070697_1003126602 187
197 3300005545 Ga0070695_100970676 Ga0070695_1009706761 187
198 3300005546 Ga0070696_100059410 Ga0070696_1000594103 187
199 3300005547 Ga0070693_100383702 Ga0070693_1003837022 187
200 3300005615 Ga0070702_100578448 Ga0070702_1005784481 187
201 3300005842 Ga0068858_100101593 Ga0068858_1001015933 187
202 3300009177 Ga0105248_10368901 Ga0105248_103689012 187
203 3300013306 Ga0163162_10310660 Ga0163162_103106601 187
204 3300014325 Ga0163163_10014831 Ga0163163_100148314 187
205 3300014968 Ga0157379_10491008 Ga0157379_104910082 187
206 3300014969 Ga0157376_10104395 Ga0157376_101043952 187
207 3300017792 Ga0163161_10197877 Ga0163161_101978772 187
208 3300025321 Ga0207656_10231924 Ga0207656_102319242 187
209 3300025899 Ga0207642_10056422 Ga0207642_100564222 187
210 3300025900 Ga0207710_10252401 Ga0207710_102524012 187
211 3300025901 Ga0207688_10051057 Ga0207688_100510572 187
212 3300025908 Ga0207643_10006055 Ga0207643_100060555 187
213 3300025917 Ga0207660_10159053 Ga0207660_101590532 187
214 3300025917 Ga0207660_10171498 Ga0207660_101714982 187
215 3300025918 Ga0207662_10016142 Ga0207662_100161425 187
216 3300025919 Ga0207657_10097177 Ga0207657_100971772 187
217 3300025920 Ga0207649_10144206 Ga0207649_101442063 187
218 3300025923 Ga0207681_10105109 Ga0207681_101051092 187
219 3300025925 Ga0207650_10201892 Ga0207650_102018921 187
220 3300025926 Ga0207659_10008676 Ga0207659_100086766 187
221 3300025927 Ga0207687_10110471 Ga0207687_101104712 187
222 3300025932 Ga0207690_10091499 Ga0207690_100914992 187
223 3300025933 Ga0207706_10045058 Ga0207706_100450583 187
224 3300025935 Ga0207709_10024651 Ga0207709_100246512 187
225 3300025936 Ga0207670_10492243 Ga0207670_104922432 187
226 3300025937 Ga0207669_10041655 Ga0207669_100416553 187
227 3300025937 Ga0207669_10160883 Ga0207669_101608831 187
228 3300025938 Ga0207704_10047666 Ga0207704_100476663 187
229 3300025940 Ga0207691_10064433 Ga0207691_100644333 187
230 3300025941 Ga0207711_10302172 Ga0207711_103021722 187
231 3300025942 Ga0207689_10209590 Ga0207689_102095902 187
232 3300025944 Ga0207661_10173469 Ga0207661_101734692 187
233 3300025949 Ga0207667_10560466 Ga0207667_105604662 187
234 3300025961 Ga0207712_10073140 Ga0207712_100731402 187
235 3300025981 Ga0207640_10564953 Ga0207640_105649532 187
236 3300026023 Ga0207677_10084121 Ga0207677_100841213 187
237 3300026035 Ga0207703_10023204 Ga0207703_100232045 187
238 3300026035 Ga0207703_10150235 Ga0207703_101502352 187
239 3300026041 Ga0207639_10046013 Ga0207639_100460132 187
240 3300026067 Ga0207678_10084756 Ga0207678_100847562 187
241 3300026075 Ga0207708_10011971 Ga0207708_100119712 187
242 3300026089 Ga0207648_10003245 Ga0207648_100032454 187
243 3300026095 Ga0207676_10327075 Ga0207676_103270752 187
244 3300026116 Ga0207674_10010824 Ga0207674_100108243 187
245 3300026118 Ga0207675_100198360 Ga0207675_1001983603 187
246 3300026121 Ga0207683_10155087 Ga0207683_101550872 187
247 3300027907 Ga0207428_10028384 Ga0207428_100283844 187
248 3300027907 Ga0207428_10398584 Ga0207428_103985842 187
249 3300028379 Ga0268266_10431316 Ga0268266_104313162 187
250 3300028380 Ga0268265_10369282 Ga0268265_103692822 187
251 3300028381 Ga0268264_10160644 Ga0268264_101606442 187
252 3300031903 Ga0307407_10113135 Ga0307407_101131352 187
253 3300031995 Ga0307409_100509896 Ga0307409_1005098962 187
254 3300031995 Ga0307409_100678462 Ga0307409_1006784622 187
255 3300032002 Ga0307416_100003370 Ga0307416_1000033707 187
256 3300032126 Ga0307415_100021502 Ga0307415_1000215022 187
257 3300034957 Ga0373938_0033945 Ga0373938_0033945_322_921 187
258 3300035114 Ga0373939_0007419 Ga0373939_0007419_1563_2162 187
259 3300035242 Ga0373962_0155995 Ga0373962_0155995_57_656 187
260 3300035691 Ga0373931_0053110 Ga0373931_0053110_960_1559 187
261 3300041512 Ga0451853_0997144 Ga0451853_0997144_183_785 187
262 3300042005 Ga0439448_0203565 Ga0439448_0203565_49_648 187
263 3300046515 Ga0495620_0249987 Ga0495620_0249987_63_662 187
264 3300048904 Ga0496101_0241965 Ga0496101_0241965_535_1134 187
265 3300048904 Ga0496101_0537371 Ga0496101_0537371_11_613 187
266 3300048905 Ga0496102_0971104 Ga0496102_0971104_48_650 187
267 3300048907 Ga0496104_0027142 Ga0496104_0027142_838_1440 187
268 3300048908 Ga0496105_0086815 Ga0496105_0086815_32_634 187
269 3300048909 Ga0496106_0031666 Ga0496106_0031666_63_662 187
270 3300048910 Ga0496107_0179860 Ga0496107_0179860_274_873 187
271 3300048911 Ga0496108_0649357 Ga0496108_0649357_111_710 187
272 3300048912 Ga0496109_0043995 Ga0496109_0043995_667_1269 187
273 3300048912 Ga0496109_0057469 Ga0496109_0057469_797_1396 187
274 3300048912 Ga0496109_0214087 Ga0496109_0214087_490_1089 187
275 3300048913 Ga0496110_0015819 Ga0496110_0015819_404_1003 187
276 3300048913 Ga0496110_0474559 Ga0496110_0474559_380_982 187
277 3300048914 Ga0496111_0194330 Ga0496111_0194330_140_742 187
278 3300048914 Ga0496111_0510215 Ga0496111_0510215_217_816 187
279 3300048916 Ga0496113_0019924 Ga0496113_0019924_3314_3913 187
280 3300048916 Ga0496113_0226866 Ga0496113_0226866_770_1372 187
281 3300048917 Ga0496114_0223439 Ga0496114_0223439_232_834 187
282 3300048917 Ga0496114_0924213 Ga0496114_0924213_64_663 187
283 3300049584 Ga0501068_0028177 Ga0501068_0028177_2425_3024 187
284 3300049585 Ga0501069_0020117 Ga0501069_0020117_2071_2670 187
285 3300050492 nmdc:mga0yw44_219437_c1 nmdc:mga0yw44_219437_c1_360_959 187
286 3300050507 nmdc:mga05p37_217144_c1 nmdc:mga05p37_217144_c1_688_1287 187
287 3300050507 nmdc:mga05p37_704599_c1 nmdc:mga05p37_704599_c1_375_974 187
288 3300050511 nmdc:mga08y16_201034_c1 nmdc:mga08y16_201034_c1_1292_1891 187
289 3300050511 nmdc:mga08y16_61221_c1 nmdc:mga08y16_61221_c1_2353_2952 187
290 3300050515 nmdc:mga0a205_224373_c1 nmdc:mga0a205_224373_c1_365_964 187
291 3300005530 Ga0070679_100240006 Ga0070679_1002400062 188
292 3300025921 Ga0207652_10521890 Ga0207652_105218902 188
293 3300005536 Ga0070697_100086423 Ga0070697_1000864232 190
294 3300005615 Ga0070702_100635935 Ga0070702_1006359351 190
295 3300005617 Ga0068859_100369476 Ga0068859_1003694762 190
296 3300006931 Ga0097620_100369444 Ga0097620_1003694442 190
297 3300009148 Ga0105243_10154881 Ga0105243_101548812 190
298 3300009174 Ga0105241_10753779 Ga0105241_107537791 190
299 3300009553 Ga0105249_10417995 Ga0105249_104179952 190
300 3300014325 Ga0163163_10060418 Ga0163163_100604182 190
301 3300014325 Ga0163163_10741950 Ga0163163_107419502 190
302 3300025936 Ga0207670_10742066 Ga0207670_107420662 190
303 3300025961 Ga0207712_10292523 Ga0207712_102925232 190
304 3300038443 Ga0395901_0710097 Ga0395901_0710097_40_633 190
305 3300048904 Ga0496101_0562598 Ga0496101_0562598_245_838 190
306 3300048912 Ga0496109_0344572 Ga0496109_0344572_41_634 190
307 3300050511 nmdc:mga08y16_88798_c1 nmdc:mga08y16_88798_c1_55_648 190
308 3300005336 Ga0070680_100674958 Ga0070680_1006749582 191
309 3300005340 Ga0070689_100224891 Ga0070689_1002248912 191
310 3300005438 Ga0070701_10169602 Ga0070701_101696022 191
311 3300005544 Ga0070686_100421514 Ga0070686_1004215142 191
312 3300005549 Ga0070704_100496835 Ga0070704_1004968352 191
313 3300014326 Ga0157380_10363331 Ga0157380_103633311 191
314 3300014745 Ga0157377_10338985 Ga0157377_103389852 191
315 3300026118 Ga0207675_100051598 Ga0207675_1000515982 191
316 3300037466 Ga0395898_0859745 Ga0395898_0859745_80_676 191
317 3300038443 Ga0395901_0267887 Ga0395901_0267887_236_832 191
318 3300049583 Ga0501067_0480576 Ga0501067_0480576_18_614 191
319 3300049591 Ga0501075_0269603 Ga0501075_0269603_393_989 191
320 3300049591 Ga0501075_0410590 Ga0501075_0410590_23_619 191
321 3300003323 rootH1_10001707 rootH1_100017072 192
322 3300025925 Ga0207650_10787695 Ga0207650_107876951 192

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04545

Sigma70_r4

Sigma-70, region 4

125

174

0.98

PF04542

Sigma70_r2

Sigma-70 region 2

24

93

0.96

PF08281

Sigma70_r4_2

Sigma-70, region 4

119

172

0.92

PF07638

Sigma70_ECF

ECF sigma factor

3

181

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5or5-assembly1.cif.gz_A nmr structure of the complex formed by an engineered region 2 of sigmae in complex with gtaaaa 0.9248 8 95
4lup-assembly2.cif.gz_C crystal structure of the complex formed by region of e. coli sigmae bound to its -10 element non template strand 0.9 1 98
2o7g-assembly1.cif.gz_A crystal structure of the pribnow box recognition region of sigc from mycobacterium tuberculosis 0.8881 5 89
4lup-assembly2.cif.gz_C crystal structure of the complex formed by region of e. coli sigmae bound to its -10 element non template strand 0.882 1 98
2mao-assembly1.cif.gz_A nmr structure of region 2 of e. coli sigmae 0.8799 1 98
ID Description Score Start End Superfamily
4lupA00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.948 9 97 1.10.1740.10
af_P9WGH7_10_94_1.10.1740.10 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9406 8 90 1.10.1740.10
5or5A00 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9248 8 95 1.10.1740.10
4cxfA01 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.9211 11 87 1.10.1740.10
1or7B01 Mainly Alpha;Orthogonal Bundle;Rna Polymerase Sigma Factor; Chain: A;RNA polymerase sigma factor, region 2, helix turn helix motif 0.916 9 92 1.10.1740.10
ID Description Score Start End GO Terms
AF-A0A4R0Q198-F1-model_v4 RNA polymerase sigma-70 region 2 domain-containing protein 0.9617 9 94 GO:0006352
GO:0016987
AF-A0A523GDW8-F1-model_v4 RNA polymerase sigma factor 0.9606 9 93 GO:0003677
GO:0006352
GO:0016987
AF-A0A533S579-F1-model_v4 Sigma-70 family RNA polymerase sigma factor 0.9598 8 94 GO:0006352
GO:0016987
AF-A0A536LFE7-F1-model_v4 RNA polymerase sigma-70 region 2 domain-containing protein 0.9592 5 89 GO:0006352
GO:0016987
AF-A0A6M0IHL5-F1-model_v4 RNA polymerase sigma-70 region 2 domain-containing protein 0.9583 2 93 GO:0003700
GO:0006352
GO:0016020

Feature Viewer

pLDDT pTM Quality
75.4 0.51 Medium
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Predicted Structure (AlphaFold2)

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