F406085

General Info

Members Datasets Scaffolds Average Seq Length
321 152 642 384

Family's Representative Sequence

Representative Sequence 3300042004|Ga0439445_0020082|Ga0439445_0020082_232_1575
Length 447
Sequence MHLPSAAVRDGCRQFAAKSQKEKSLAESSCAITILPSEAAAGFSLSPSMPDRKLRGASRRLAPGSALVPKKRSSSRTPRSGDGTVATDGFYRDLVWTLRNGVLAITRDGRVAVMNEVAYRILGLRSKPSDIGTLFTTVLRDRPDVCRILAGAFDLSHLPNRAELRLKSTGKVIGYTLSQVRDRRGHITGATLFFKDLTRVEQLEERERLRDRLAALGEMAAAIAHEVKNPLAGIEVMAGILKRQLQESPDAQAILGDIIKEAKMANAIVLEILDFVRPIRLQVETITLADAVRDAISMAESHVPRGEVAVEIALAPDLPSIHGDPHQLRQLFTNLLTNAFEALGGRGTVRILAARLAEEPIFGGEPQAGPSLLIEVIDDGPGVPADVMDRIFSPFFTTKPQGSGLGLAIVRKIVDAHDGRIDVGAPMAGGTRFRVTLPVKSSHELFR

Samples

Sample ID Description Type Environment
1 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
14 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
35 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
36 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
51 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
52 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
89 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
90 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
91 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
94 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
96 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
97 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
98 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
99 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
100 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
101 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
102 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
103 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
104 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
105 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
106 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
107 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
108 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
109 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
110 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
111 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
112 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
113 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
114 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
115 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
116 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
118 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
119 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
123 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
124 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
125 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
130 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
131 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
132 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
133 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
134 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
142 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
143 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
146 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
147 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
148 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
149 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
150 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
151 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
152 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.61
Nodule 0
Rhizoplane 4.05
Rhizosphere 90.34
Stem 0
Stem Tuber 0
Unclassified 3.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439445_0020082 3300042004 Unclassified 1669
2 Ga0065712_10014851 3300005290 Bacteria 2106
3 Ga0065712_10067842 3300005290 Bacteria 26512
4 Ga0065712_10068160 3300005290 Bacteria 13650
5 Ga0065715_10104925 3300005293 Bacteria 2926
6 Ga0065707_10011968 3300005295 Bacteria 2897
7 Ga0070676_10026904 3300005328 Bacteria 3257
8 Ga0070683_100000326 3300005329 Bacteria 32914
9 Ga0070670_100003891 3300005331 Bacteria 12449
10 Ga0070670_100031741 3300005331 Bacteria 4550
11 Ga0068869_100063651 3300005334 Bacteria 2711
12 Ga0068869_100191609 3300005334 Bacteria 1608
13 Ga0070666_10022101 3300005335 Bacteria 4128
14 Ga0070666_10109003 3300005335 Bacteria 1913
15 Ga0070668_100104829 3300005347 Bacteria 2245
16 Ga0070668_100190654 3300005347 Bacteria 1679
17 Ga0070669_100001283 3300005353 Bacteria 18152
18 Ga0070669_100176193 3300005353 Unclassified 1670
19 Ga0070675_100007631 3300005354 Bacteria 8369
20 Ga0070675_100116875 3300005354 Bacteria 2262
21 Ga0070675_100121109 3300005354 Bacteria 2223
22 Ga0070675_100150081 3300005354 Bacteria 1998
23 Ga0070674_100010103 3300005356 Bacteria 5687
24 Ga0070674_100122318 3300005356 Bacteria 1928
25 Ga0070673_100010680 3300005364 Bacteria 6227
26 Ga0070688_100010356 3300005365 Bacteria 5139
27 Ga0070713_100045214 3300005436 Bacteria 3607
28 Ga0070678_100116512 3300005456 Bacteria 2099
29 Ga0068867_100209862 3300005459 Bacteria 1563
30 Ga0070685_10087227 3300005466 Archaea 1883
31 Ga0070698_100066859 3300005471 Bacteria 3616
32 Ga0070698_100088265 3300005471 Bacteria 3086
33 Ga0070699_100085985 3300005518 Bacteria 2744
34 Ga0070679_100020674 3300005530 Bacteria 6420
35 Ga0070684_100000168 3300005535 Bacteria 45138
36 Ga0070672_100075237 3300005543 Bacteria 2696
37 Ga0070672_100138875 3300005543 Bacteria 2003
38 Ga0070693_100010451 3300005547 Bacteria 4652
39 Ga0070664_100001925 3300005564 Bacteria 16671
40 Ga0068857_100117996 3300005577 Bacteria 2388
41 Ga0068859_100059331 3300005617 Bacteria 3855
42 Ga0068859_100380391 3300005617 Bacteria 1507
43 Ga0068864_100089322 3300005618 Bacteria 2715
44 Ga0068861_100109479 3300005719 Bacteria 2211
45 Ga0068862_100068308 3300005844 Bacteria 3066
46 Ga0068862_100096789 3300005844 Bacteria 2577
47 Ga0075365_10102352 3300006038 Bacteria 1962
48 Ga0075364_10070728 3300006051 Bacteria 2297
49 Ga0075367_10058005 3300006178 Bacteria 2303
50 Ga0075366_10002234 3300006195 Bacteria 9888
51 Ga0075370_10005057 3300006353 Bacteria 6498
52 Ga0075428_100000931 3300006844 Bacteria 30952
53 Ga0075428_100007000 3300006844 Bacteria 12507
54 Ga0075428_100007849 3300006844 Bacteria 11830
55 Ga0075428_100009717 3300006844 Bacteria 10684
56 Ga0075428_100018850 3300006844 Bacteria 7630
57 Ga0075428_100073496 3300006844 Bacteria 3735
58 Ga0075430_100045616 3300006846 Bacteria 3702
59 Ga0075430_100073749 3300006846 Bacteria 2861
60 Ga0075430_100087149 3300006846 Bacteria 2612
61 Ga0075430_100107603 3300006846 Bacteria 2326
62 Ga0075430_100130852 3300006846 Bacteria 2091
63 Ga0075431_100014789 3300006847 Bacteria 7900
64 Ga0075431_100022175 3300006847 Bacteria 6494
65 Ga0075431_100048861 3300006847 Bacteria 4363
66 Ga0075431_100063428 3300006847 Bacteria 3813
67 Ga0075431_100133401 3300006847 Bacteria 2561
68 Ga0075431_100148373 3300006847 Bacteria 2415
69 Ga0075431_100193057 3300006847 Bacteria 2086
70 Ga0075433_10011630 3300006852 Bacteria 7087
71 Ga0075433_10073341 3300006852 Bacteria 3010
72 Ga0075434_100010035 3300006871 Bacteria 8867
73 Ga0075429_100002746 3300006880 Bacteria 14869
74 Ga0075429_100082787 3300006880 Bacteria 2797
75 Ga0075429_100101027 3300006880 Bacteria 2518
76 Ga0075429_100101582 3300006880 Bacteria 2511
77 Ga0097620_100059335 3300006931 Bacteria 3855
78 Ga0097620_100380375 3300006931 Bacteria 1507
79 Ga0075435_100116652 3300007076 Bacteria 2224
80 Ga0111539_10000657 3300009094 Bacteria 44621
81 Ga0111539_10005833 3300009094 Bacteria 15921
82 Ga0111539_10011724 3300009094 Bacteria 10998
83 Ga0111539_10012690 3300009094 Bacteria 10551
84 Ga0111539_10024643 3300009094 Bacteria 7379
85 Ga0111539_10055021 3300009094 Bacteria 4731
86 Ga0111539_10172249 3300009094 Bacteria 2528
87 Ga0111539_10203471 3300009094 Bacteria 2308
88 Ga0114129_10002523 3300009147 Bacteria 25424
89 Ga0114129_10028502 3300009147 Bacteria 7913
90 Ga0114129_10038503 3300009147 Bacteria 6744
91 Ga0114129_10038510 3300009147 Bacteria 6743
92 Ga0114129_10041409 3300009147 Bacteria 6491
93 Ga0114129_10058007 3300009147 Bacteria 5417
94 Ga0114129_10077923 3300009147 Bacteria 4610
95 Ga0114129_10087959 3300009147 Bacteria 4308
96 Ga0105243_10241112 3300009148 Bacteria 1609
97 Ga0105248_10028979 3300009177 Bacteria 6173
98 Ga0105249_10006979 3300009553 Bacteria 9852
99 Ga0105246_10190658 3300011119 Unclassified 1586
100 Ga0157378_10069709 3300013297 Bacteria 3155
101 Ga0163162_10448689 3300013306 Bacteria 1422
102 Ga0157375_10117276 3300013308 Bacteria 2767
103 Ga0157375_10119191 3300013308 Bacteria 2747
104 Ga0163163_10241296 3300014325 Unclassified 1857
105 Ga0157380_10007549 3300014326 Bacteria 7725
106 Ga0157380_10046762 3300014326 Bacteria 3401
107 Ga0157380_10228505 3300014326 Bacteria 1669
108 Ga0157377_10012608 3300014745 Bacteria 4254
109 Ga0157377_10063654 3300014745 Bacteria 2113
110 Ga0207682_10010437 3300025893 Bacteria 3641
111 Ga0207682_10036832 3300025893 Bacteria 1980
112 Ga0207642_10019342 3300025899 Bacteria 2635
113 Ga0207645_10031293 3300025907 Bacteria 3425
114 Ga0207681_10002073 3300025923 Bacteria 12836
115 Ga0207681_10107244 3300025923 Unclassified 2026
116 Ga0207650_10004615 3300025925 Bacteria 9421
117 Ga0207650_10035267 3300025925 Bacteria 3631
118 Ga0207650_10092830 3300025925 Bacteria 2310
119 Ga0207659_10011348 3300025926 Bacteria 5626
120 Ga0207659_10015505 3300025926 Bacteria 4940
121 Ga0207659_10039253 3300025926 Bacteria 3300
122 Ga0207670_10229862 3300025936 Bacteria 1424
123 Ga0207669_10002919 3300025937 Bacteria 7343
124 Ga0207669_10005354 3300025937 Bacteria 5749
125 Ga0207691_10059724 3300025940 Bacteria 3466
126 Ga0207691_10152731 3300025940 Bacteria 2029
127 Ga0207691_10160196 3300025940 Unclassified 1975
128 Ga0207691_10170063 3300025940 Bacteria 1909
129 Ga0207689_10072680 3300025942 Bacteria 2825
130 Ga0207689_10111242 3300025942 Bacteria 2251
131 Ga0207689_10166967 3300025942 Bacteria 1813
132 Ga0207661_10182889 3300025944 Bacteria 1832
133 Ga0207679_10001730 3300025945 Bacteria 13592
134 Ga0207679_10017149 3300025945 Bacteria 4822
135 Ga0207651_10006276 3300025960 Bacteria 6200
136 Ga0207651_10029010 3300025960 Bacteria 3500
137 Ga0207712_10006401 3300025961 Bacteria 7428
138 Ga0207712_10251635 3300025961 Bacteria 1428
139 Ga0207668_10120945 3300025972 Bacteria 1983
140 Ga0207668_10202743 3300025972 Unclassified 1581
141 Ga0207703_10228959 3300026035 Bacteria 1666
142 Ga0207678_10077285 3300026067 Bacteria 2851
143 Ga0207708_10058381 3300026075 Bacteria 2944
144 Ga0207708_10144083 3300026075 Bacteria 1871
145 Ga0207708_10161267 3300026075 Bacteria 1771
146 Ga0207641_10139734 3300026088 Bacteria 2184
147 Ga0207648_10092214 3300026089 Bacteria 2648
148 Ga0207648_10117711 3300026089 Bacteria 2335
149 Ga0207676_10040674 3300026095 Bacteria 3563
150 Ga0207674_10171261 3300026116 Bacteria 2124
151 Ga0207675_100071861 3300026118 Bacteria 3235
152 Ga0207675_100105055 3300026118 Bacteria 2662
153 Ga0207675_100142404 3300026118 Bacteria 2278
154 Ga0207683_10101897 3300026121 Bacteria 2563
155 Ga0207683_10145860 3300026121 Bacteria 2134
156 Ga0207683_10254003 3300026121 Bacteria 1604
157 Ga0207698_10465833 3300026142 Bacteria 1223
158 Ga0207428_10000349 3300027907 Bacteria 59671
159 Ga0207428_10005628 3300027907 Bacteria 11654
160 Ga0268265_10049803 3300028380 Bacteria 3152
161 Ga0268265_10115584 3300028380 Bacteria 2200
162 Ga0307408_100021660 3300031548 Bacteria 4353
163 Ga0307408_100035710 3300031548 Bacteria 3490
164 Ga0307408_100070056 3300031548 Bacteria 2588
165 Ga0307408_100100562 3300031548 Bacteria 2202
166 Ga0307405_10093300 3300031731 Bacteria 1999
167 Ga0307405_10101782 3300031731 Bacteria 1928
168 Ga0307405_10105666 3300031731 Bacteria 1897
169 Ga0307405_10179970 3300031731 Bacteria 1517
170 Ga0307410_10002447 3300031852 Bacteria 8970
171 Ga0307410_10011192 3300031852 Bacteria 5120
172 Ga0307410_10076895 3300031852 Bacteria 2331
173 Ga0307406_10015397 3300031901 Bacteria 4425
174 Ga0307407_10020223 3300031903 Bacteria 3406
175 Ga0307407_10048147 3300031903 Bacteria 2424
176 Ga0307412_10026724 3300031911 Bacteria 3591
177 Ga0307412_10035573 3300031911 Bacteria 3183
178 Ga0307412_10115620 3300031911 Bacteria 1923
179 Ga0307412_10222301 3300031911 Bacteria 1448
180 Ga0307409_100044173 3300031995 Bacteria 3354
181 Ga0307409_100047840 3300031995 Bacteria 3250
182 Ga0307409_100135170 3300031995 Bacteria 2114
183 Ga0307409_100175741 3300031995 Bacteria 1890
184 Ga0307409_100252269 3300031995 Bacteria 1614
185 Ga0307416_100034441 3300032002 Bacteria 3854
186 Ga0307416_100077475 3300032002 Bacteria 2792
187 Ga0307411_10018131 3300032005 Bacteria 4030
188 Ga0307411_10167439 3300032005 Bacteria 1653
189 Ga0307411_10224476 3300032005 Bacteria 1460
190 Ga0307415_100038051 3300032126 Bacteria 3167
191 Ga0307415_100044435 3300032126 Bacteria 2970
192 Ga0373937_0066462 3300036401 Bacteria 3320
193 Ga0373925_0003227 3300037068 Bacteria 12741
194 Ga0373925_0188935 3300037068 Bacteria 1634
195 Ga0439431_0030258 3300041997 Bacteria 1340
196 Ga0439445_0044793 3300042004 Bacteria 1183
197 Ga0439446_0008306 3300042156 Bacteria 2753
198 Ga0439446_0028402 3300042156 Bacteria 1610
199 Ga0450908_001867 3300042184 Bacteria 4121
200 Ga0439435_0009560 3300042436 Bacteria 2278
201 Ga0439435_0022551 3300042436 Bacteria 1644
202 Ga0450916_004465 3300042530 Bacteria 1580
203 Ga0451577_0009429 3300042876 Bacteria 9408
204 Ga0451577_0057617 3300042876 Bacteria 3463
205 Ga0495638_0136855 3300046460 Unclassified 1433
206 Ga0495594_0010891 3300046499 Bacteria 4723
207 Ga0495656_0009879 3300046615 Bacteria 3448
208 Ga0495656_0042211 3300046615 Bacteria 1909
209 Ga0495672_0031283 3300047320 Bacteria 3324
210 Ga0496102_0018549 3300048905 Bacteria 6116
211 Ga0496104_0001797 3300048907 Bacteria 18590
212 Ga0496107_0142514 3300048910 Bacteria 1772
213 Ga0496108_0003510 3300048911 Bacteria 12565
214 Ga0496109_0001647 3300048912 Bacteria 18650
215 Ga0496109_0061864 3300048912 Bacteria 3424
216 Ga0496110_0001962 3300048913 Bacteria 15279
217 Ga0496111_0015192 3300048914 Bacteria 5279
218 Ga0496111_0172272 3300048914 Bacteria 1608
219 Ga0496112_0007696 3300048915 Bacteria 9582
220 Ga0496112_0112589 3300048915 Bacteria 2692
221 Ga0496113_0142971 3300048916 Bacteria 1883
222 Ga0496114_0252778 3300048917 Bacteria 1551
223 Ga0501036_0039236 3300049572 Bacteria 4008
224 Ga0501036_0144958 3300049572 Bacteria 2003
225 Ga0501041_0009206 3300049577 Bacteria 5816
226 Ga0501042_0035582 3300049578 Bacteria 3532
227 Ga0501042_0182623 3300049578 Bacteria 1513
228 Ga0501048_0018281 3300049582 Bacteria 5157
229 Ga0501048_0114843 3300049582 Bacteria 1902
230 Ga0501071_0006339 3300049587 Bacteria 7673
231 Ga0501071_0019257 3300049587 Bacteria 4735
232 Ga0501071_0181941 3300049587 Bacteria 1575
233 Ga0501072_0010841 3300049588 Bacteria 6947
234 Ga0501072_0030462 3300049588 Bacteria 4220
235 Ga0501072_0054787 3300049588 Bacteria 3143
236 Ga0501072_0151854 3300049588 Bacteria 1846
237 Ga0501073_0171092 3300049589 Bacteria 1504
238 Ga0501074_0068096 3300049590 Bacteria 2559
239 Ga0501075_0005251 3300049591 Bacteria 8857
240 Ga0501075_0016934 3300049591 Bacteria 5256
241 Ga0501075_0166101 3300049591 Bacteria 1684
242 Ga0501076_0006460 3300049592 Bacteria 8510
243 Ga0501076_0025110 3300049592 Bacteria 4609
244 Ga0501076_0025519 3300049592 Bacteria 4574
245 Ga0501076_0044636 3300049592 Bacteria 3495
246 Ga0501079_0037383 3300049741 Bacteria 3742
247 Ga0501079_0063459 3300049741 Bacteria 2850
248 Ga0501080_0146605 3300049742 Bacteria 2182
249 Ga0501080_0274549 3300049742 Unclassified 1534
250 Ga0501081_0006802 3300049743 Bacteria 7436
251 Ga0501081_0048395 3300049743 Bacteria 2926
252 Ga0501081_0125697 3300049743 Bacteria 1829
253 Ga0501081_0304876 3300049743 Bacteria 1169
254 Ga0501045_0057783 3300049824 Bacteria 2839
255 Ga0501045_0090151 3300049824 Bacteria 2265
256 Ga0501045_0200907 3300049824 Bacteria 1485
257 nmdc:mga03683_1421_c1 3300050489 Bacteria 7137
258 nmdc:mga0yw44_3476_c2 3300050492 Bacteria 5975
259 nmdc:mga0k408_13166_c1 3300050493 Bacteria 4532
260 nmdc:mga0k408_13917_c1 3300050493 Bacteria 4421
261 nmdc:mga0k408_172412_c1 3300050493 Bacteria 1290
262 nmdc:mga0k408_51288_c1 3300050493 Bacteria 2390
263 nmdc:mga0k408_72341_c1 3300050493 Bacteria 2014
264 nmdc:mga06z11_55432_c1 3300050494 Bacteria 2047
265 nmdc:mga07m45_24017_c1 3300050496 Bacteria 3336
266 nmdc:mga05p37_13386_c1 3300050507 Bacteria 9831
267 nmdc:mga05p37_134617_c1 3300050507 Bacteria 3032
268 nmdc:mga05p37_15674_c1 3300050507 Bacteria 9111
269 nmdc:mga05p37_16491_c1 3300050507 Bacteria 8899
270 nmdc:mga05p37_19000_c1 3300050507 Bacteria 8310
271 nmdc:mga05p37_20840_c1 3300050507 Bacteria 7935
272 nmdc:mga05p37_26296_c1 3300050507 Bacteria 7078
273 nmdc:mga05p37_6417_c1 3300050507 Bacteria 13865
274 nmdc:mga09592_25164_c1 3300050508 Bacteria 4924
275 nmdc:mga09592_32887_c1 3300050508 Bacteria 4325
276 nmdc:mga09592_50980_c1 3300050508 Bacteria 3491
277 nmdc:mga09592_51483_c1 3300050508 Bacteria 3474
278 nmdc:mga0qj67_145094_c1 3300050509 Unclassified 1924
279 nmdc:mga0qj67_15225_c1 3300050509 Bacteria 5821
280 nmdc:mga0qj67_24211_c1 3300050509 Bacteria 4678
281 nmdc:mga0qj67_307242_c1 3300050509 Bacteria 1285
282 nmdc:mga06r32_112195_c1 3300050510 Bacteria 2683
283 nmdc:mga06r32_143367_c1 3300050510 Bacteria 2366
284 nmdc:mga06r32_14351_c1 3300050510 Bacteria 7190
285 nmdc:mga06r32_177142_c1 3300050510 Bacteria 2117
286 nmdc:mga06r32_250008_c1 3300050510 Bacteria 1760
287 nmdc:mga06r32_26422_c1 3300050510 Bacteria 5413
288 nmdc:mga06r32_71328_c1 3300050510 Bacteria 3361
289 nmdc:mga06r32_9031_c1 3300050510 Bacteria 8981
290 nmdc:mga08y16_10909_c1 3300050511 Bacteria 9544
291 nmdc:mga08y16_169029_c1 3300050511 Bacteria 2271
292 nmdc:mga08y16_2075_c1 3300050511 Bacteria 20545
293 nmdc:mga08y16_285973_c1 3300050511 Bacteria 1700
294 nmdc:mga08y16_527_c1 3300050511 Bacteria 35360
295 nmdc:mga08y16_56636_c1 3300050511 Bacteria 4096
296 nmdc:mga08y16_611_c1 3300050511 Bacteria 33310
297 nmdc:mga08y16_6232_c1 3300050511 Bacteria 12508
298 nmdc:mga0n895_102823_c1 3300050512 Bacteria 2868
299 nmdc:mga0n895_15190_c1 3300050512 Bacteria 7016
300 nmdc:mga0n895_4706_c1 3300050512 Bacteria 11265
301 nmdc:mga0a205_155197_c1 3300050515 Bacteria 2188
302 nmdc:mga0a205_218993_c1 3300050515 Bacteria 1790
303 nmdc:mga0a205_22780_c1 3300050515 Bacteria 5938
304 nmdc:mga0a205_406407_c1 3300050515 Unclassified 1225
305 nmdc:mga0a205_492_c1 3300050515 Bacteria 30923
306 nmdc:mga0a205_90359_c1 3300050515 Bacteria 2959
307 Ga0495595_0044317 3300053084 Bacteria 2044
308 Ga0500555_000401 3300053103 Bacteria 18086
309 Ga0500568_0012670 3300053139 Bacteria 3869
310 Ga0500616_0000556 3300053153 Bacteria 46113
311 Ga0500645_000544 3300053730 Bacteria 25035
312 Ga0590071_000102 3300059421 Bacteria 24267
313 Ga0590071_001238 3300059421 Bacteria 6905
314 Ga0590074_001158 3300059423 Bacteria 4155
315 Ga0590075_000094 3300059424 Bacteria 22962
316 Ga0590075_000826 3300059424 Bacteria 8158
317 Ga0590077_000343 3300059426 Bacteria 13228
318 Ga0590077_001204 3300059426 Bacteria 6259
319 Ga0501082_0288465 3300060353 Bacteria 1429
320 Ga0530510_0067986 3300061734 Bacteria 2585
321 Ga0530510_0126091 3300061734 Unclassified 1882
322 Ga0439445_0020082
323 Ga0065712_10014851
324 Ga0065712_10067842
325 Ga0065712_10068160
326 Ga0065715_10104925
327 Ga0065707_10011968
328 Ga0070676_10026904
329 Ga0070683_100000326
330 Ga0070670_100003891
331 Ga0070670_100031741
332 Ga0068869_100063651
333 Ga0068869_100191609
334 Ga0070666_10022101
335 Ga0070666_10109003
336 Ga0070668_100104829
337 Ga0070668_100190654
338 Ga0070669_100001283
339 Ga0070669_100176193
340 Ga0070675_100007631
341 Ga0070675_100116875
342 Ga0070675_100121109
343 Ga0070675_100150081
344 Ga0070674_100010103
345 Ga0070674_100122318
346 Ga0070673_100010680
347 Ga0070688_100010356
348 Ga0070713_100045214
349 Ga0070678_100116512
350 Ga0068867_100209862
351 Ga0070685_10087227
352 Ga0070698_100066859
353 Ga0070698_100088265
354 Ga0070699_100085985
355 Ga0070679_100020674
356 Ga0070684_100000168
357 Ga0070672_100075237
358 Ga0070672_100138875
359 Ga0070693_100010451
360 Ga0070664_100001925
361 Ga0068857_100117996
362 Ga0068859_100059331
363 Ga0068859_100380391
364 Ga0068864_100089322
365 Ga0068861_100109479
366 Ga0068862_100068308
367 Ga0068862_100096789
368 Ga0075365_10102352
369 Ga0075364_10070728
370 Ga0075367_10058005
371 Ga0075366_10002234
372 Ga0075370_10005057
373 Ga0075428_100000931
374 Ga0075428_100007000
375 Ga0075428_100007849
376 Ga0075428_100009717
377 Ga0075428_100018850
378 Ga0075428_100073496
379 Ga0075430_100045616
380 Ga0075430_100073749
381 Ga0075430_100087149
382 Ga0075430_100107603
383 Ga0075430_100130852
384 Ga0075431_100014789
385 Ga0075431_100022175
386 Ga0075431_100048861
387 Ga0075431_100063428
388 Ga0075431_100133401
389 Ga0075431_100148373
390 Ga0075431_100193057
391 Ga0075433_10011630
392 Ga0075433_10073341
393 Ga0075434_100010035
394 Ga0075429_100002746
395 Ga0075429_100082787
396 Ga0075429_100101027
397 Ga0075429_100101582
398 Ga0097620_100059335
399 Ga0097620_100380375
400 Ga0075435_100116652
401 Ga0111539_10000657
402 Ga0111539_10005833
403 Ga0111539_10011724
404 Ga0111539_10012690
405 Ga0111539_10024643
406 Ga0111539_10055021
407 Ga0111539_10172249
408 Ga0111539_10203471
409 Ga0114129_10002523
410 Ga0114129_10028502
411 Ga0114129_10038503
412 Ga0114129_10038510
413 Ga0114129_10041409
414 Ga0114129_10058007
415 Ga0114129_10077923
416 Ga0114129_10087959
417 Ga0105243_10241112
418 Ga0105248_10028979
419 Ga0105249_10006979
420 Ga0105246_10190658
421 Ga0157378_10069709
422 Ga0163162_10448689
423 Ga0157375_10117276
424 Ga0157375_10119191
425 Ga0163163_10241296
426 Ga0157380_10007549
427 Ga0157380_10046762
428 Ga0157380_10228505
429 Ga0157377_10012608
430 Ga0157377_10063654
431 Ga0207682_10010437
432 Ga0207682_10036832
433 Ga0207642_10019342
434 Ga0207645_10031293
435 Ga0207681_10002073
436 Ga0207681_10107244
437 Ga0207650_10004615
438 Ga0207650_10035267
439 Ga0207650_10092830
440 Ga0207659_10011348
441 Ga0207659_10015505
442 Ga0207659_10039253
443 Ga0207670_10229862
444 Ga0207669_10002919
445 Ga0207669_10005354
446 Ga0207691_10059724
447 Ga0207691_10152731
448 Ga0207691_10160196
449 Ga0207691_10170063
450 Ga0207689_10072680
451 Ga0207689_10111242
452 Ga0207689_10166967
453 Ga0207661_10182889
454 Ga0207679_10001730
455 Ga0207679_10017149
456 Ga0207651_10006276
457 Ga0207651_10029010
458 Ga0207712_10006401
459 Ga0207712_10251635
460 Ga0207668_10120945
461 Ga0207668_10202743
462 Ga0207703_10228959
463 Ga0207678_10077285
464 Ga0207708_10058381
465 Ga0207708_10144083
466 Ga0207708_10161267
467 Ga0207641_10139734
468 Ga0207648_10092214
469 Ga0207648_10117711
470 Ga0207676_10040674
471 Ga0207674_10171261
472 Ga0207675_100071861
473 Ga0207675_100105055
474 Ga0207675_100142404
475 Ga0207683_10101897
476 Ga0207683_10145860
477 Ga0207683_10254003
478 Ga0207698_10465833
479 Ga0207428_10000349
480 Ga0207428_10005628
481 Ga0268265_10049803
482 Ga0268265_10115584
483 Ga0307408_100021660
484 Ga0307408_100035710
485 Ga0307408_100070056
486 Ga0307408_100100562
487 Ga0307405_10093300
488 Ga0307405_10101782
489 Ga0307405_10105666
490 Ga0307405_10179970
491 Ga0307410_10002447
492 Ga0307410_10011192
493 Ga0307410_10076895
494 Ga0307406_10015397
495 Ga0307407_10020223
496 Ga0307407_10048147
497 Ga0307412_10026724
498 Ga0307412_10035573
499 Ga0307412_10115620
500 Ga0307412_10222301
501 Ga0307409_100044173
502 Ga0307409_100047840
503 Ga0307409_100135170
504 Ga0307409_100175741
505 Ga0307409_100252269
506 Ga0307416_100034441
507 Ga0307416_100077475
508 Ga0307411_10018131
509 Ga0307411_10167439
510 Ga0307411_10224476
511 Ga0307415_100038051
512 Ga0307415_100044435
513 Ga0373937_0066462
514 Ga0373925_0003227
515 Ga0373925_0188935
516 Ga0439431_0030258
517 Ga0439445_0044793
518 Ga0439446_0008306
519 Ga0439446_0028402
520 Ga0450908_001867
521 Ga0439435_0009560
522 Ga0439435_0022551
523 Ga0450916_004465
524 Ga0451577_0009429
525 Ga0451577_0057617
526 Ga0495638_0136855
527 Ga0495594_0010891
528 Ga0495656_0009879
529 Ga0495656_0042211
530 Ga0495672_0031283
531 Ga0496102_0018549
532 Ga0496104_0001797
533 Ga0496107_0142514
534 Ga0496108_0003510
535 Ga0496109_0001647
536 Ga0496109_0061864
537 Ga0496110_0001962
538 Ga0496111_0015192
539 Ga0496111_0172272
540 Ga0496112_0007696
541 Ga0496112_0112589
542 Ga0496113_0142971
543 Ga0496114_0252778
544 Ga0501036_0039236
545 Ga0501036_0144958
546 Ga0501041_0009206
547 Ga0501042_0035582
548 Ga0501042_0182623
549 Ga0501048_0018281
550 Ga0501048_0114843
551 Ga0501071_0006339
552 Ga0501071_0019257
553 Ga0501071_0181941
554 Ga0501072_0010841
555 Ga0501072_0030462
556 Ga0501072_0054787
557 Ga0501072_0151854
558 Ga0501073_0171092
559 Ga0501074_0068096
560 Ga0501075_0005251
561 Ga0501075_0016934
562 Ga0501075_0166101
563 Ga0501076_0006460
564 Ga0501076_0025110
565 Ga0501076_0025519
566 Ga0501076_0044636
567 Ga0501079_0037383
568 Ga0501079_0063459
569 Ga0501080_0146605
570 Ga0501080_0274549
571 Ga0501081_0006802
572 Ga0501081_0048395
573 Ga0501081_0125697
574 Ga0501081_0304876
575 Ga0501045_0057783
576 Ga0501045_0090151
577 Ga0501045_0200907
578 nmdc:mga03683_1421_c1
579 nmdc:mga0yw44_3476_c2
580 nmdc:mga0k408_13166_c1
581 nmdc:mga0k408_13917_c1
582 nmdc:mga0k408_172412_c1
583 nmdc:mga0k408_51288_c1
584 nmdc:mga0k408_72341_c1
585 nmdc:mga06z11_55432_c1
586 nmdc:mga07m45_24017_c1
587 nmdc:mga05p37_13386_c1
588 nmdc:mga05p37_134617_c1
589 nmdc:mga05p37_15674_c1
590 nmdc:mga05p37_16491_c1
591 nmdc:mga05p37_19000_c1
592 nmdc:mga05p37_20840_c1
593 nmdc:mga05p37_26296_c1
594 nmdc:mga05p37_6417_c1
595 nmdc:mga09592_25164_c1
596 nmdc:mga09592_32887_c1
597 nmdc:mga09592_50980_c1
598 nmdc:mga09592_51483_c1
599 nmdc:mga0qj67_145094_c1
600 nmdc:mga0qj67_15225_c1
601 nmdc:mga0qj67_24211_c1
602 nmdc:mga0qj67_307242_c1
603 nmdc:mga06r32_112195_c1
604 nmdc:mga06r32_143367_c1
605 nmdc:mga06r32_14351_c1
606 nmdc:mga06r32_177142_c1
607 nmdc:mga06r32_250008_c1
608 nmdc:mga06r32_26422_c1
609 nmdc:mga06r32_71328_c1
610 nmdc:mga06r32_9031_c1
611 nmdc:mga08y16_10909_c1
612 nmdc:mga08y16_169029_c1
613 nmdc:mga08y16_2075_c1
614 nmdc:mga08y16_285973_c1
615 nmdc:mga08y16_527_c1
616 nmdc:mga08y16_56636_c1
617 nmdc:mga08y16_611_c1
618 nmdc:mga08y16_6232_c1
619 nmdc:mga0n895_102823_c1
620 nmdc:mga0n895_15190_c1
621 nmdc:mga0n895_4706_c1
622 nmdc:mga0a205_155197_c1
623 nmdc:mga0a205_218993_c1
624 nmdc:mga0a205_22780_c1
625 nmdc:mga0a205_406407_c1
626 nmdc:mga0a205_492_c1
627 nmdc:mga0a205_90359_c1
628 Ga0495595_0044317
629 Ga0500555_000401
630 Ga0500568_0012670
631 Ga0500616_0000556
632 Ga0500645_000544
633 Ga0590071_000102
634 Ga0590071_001238
635 Ga0590074_001158
636 Ga0590075_000094
637 Ga0590075_000826
638 Ga0590077_000343
639 Ga0590077_001204
640 Ga0501082_0288465
641 Ga0530510_0067986
642 Ga0530510_0126091

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00512

HisKA

His Kinase A (phospho-acceptor) domain

215

279

0.96

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

323

441

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3a0w-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) for mad phasing (nucleotide free form 2, orthorombic) 0.9034 217 376
3a0z-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.8999 217 376
3a0w-assembly2.cif.gz_B catalytic domain of histidine kinase thka (tm1359) for mad phasing (nucleotide free form 2, orthorombic) 0.8795 217 376
3a0z-assembly2.cif.gz_B catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.8752 217 376
1r62-assembly1.cif.gz_A crystal structure of the c-terminal domain of the two-component system transmitter protein nrii (ntrb) 0.8729 219 378
ID Description Score Start End Superfamily
af_Q7JYY8_1_96_1.20.5.110 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.9391 147 211 1.20.5.110
af_P14377_310_462_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9165 217 376 3.30.565.10
af_Q7K010_1_97_1.20.5.110 Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; 0.915 146 211 1.20.5.110
af_I1LI26_490_569_1.10.287.130 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.8971 139 211 1.10.287.130
af_Q2FVQ8_303_454_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.8859 219 375 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A3N5N6G5-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9423 256 378 GO:0016772
AF-A0A257U3Z8-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9282 134 379 GO:0000155
AF-A0A523E445-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9254 134 380 GO:0000155
AF-A0A356A9Q0-F1-model_v4 deleted 0.9219 271 379
AF-A0A0T5YXT4-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9175 194 382 GO:0000155

Map