F406041

General Info

Members Datasets Scaffolds Average Seq Length
321 193 642 266

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100050205|Ga0307408_1000502054
Length 312
Sequence MDNGSGFEAYGAKSVTVNAPKPGKMPRFYSVDCTLDEVHNMDALLAERTYMNQNPVQGAQVVSRIAGLLRIAGRKPEGSPLVELVKESALTRPTVHRLLTSLAAEGLLDHDARTGNWVLGPEILLMGSVASARFPLEEIARPSLRRLAEETGESAFFSIRRGAETVCLLREEGSFPVRSFVLHEGVRFPLGVASAGTAIMAFLPENEQEQVLARWADHAGPFAEAHTEEVVRASLARTRETGYSVNPGLVLEGSWGMGAAVFDQSGRPAWALSLTGIEPRFREDRQEFLGRLLMEEAHRITGRLGTPGKELL

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
13 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
14 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
15 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
16 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
17 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
18 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
19 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
20 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
21 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
22 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
27 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
42 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
47 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
48 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
54 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
55 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
58 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
59 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
60 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
61 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
62 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
63 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
64 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
65 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
66 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
67 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
68 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
69 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
70 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
71 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
72 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
73 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
74 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
75 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
76 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
77 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
78 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
79 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
80 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
81 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
82 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
83 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
84 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
85 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
86 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
87 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
88 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
89 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
90 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
93 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
94 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
95 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
96 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
97 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
98 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
99 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
100 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
101 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
102 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
103 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
104 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
105 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
106 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
107 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
108 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
109 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
110 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
111 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
112 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
113 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
114 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
115 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
116 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
117 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
118 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
119 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
120 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
121 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
122 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
123 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
124 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
125 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
126 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
133 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
139 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
140 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
141 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
142 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
143 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
144 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
145 2537561592 Arthrobacter crystallopoietes BAB-32 Isolate Rhizosphere
146 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
147 2643221572 Leifsonia sp. Root60 Isolate Unclassified
148 2643221630 Microbacterium sp. Root322 Isolate Unclassified
149 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
150 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
151 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
152 2775506735 Arthrobacter sp. S95 1704 Isolate Unclassified
153 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
154 2808606357 Arthrobacter sp. SLBN-122 Isolate Unclassified
155 2808606360 Arthrobacter sp. SLBN-112 Isolate Unclassified
156 2808606366 Arthrobacter sp. SLBN-83 Isolate Unclassified
157 2808606370 Arthrobacter sp. SLBN-100 Isolate Unclassified
158 2808606371 Arthrobacter sp. SLBN-53 Isolate Unclassified
159 2808606372 Agromyces sp. 23-23 Isolate Unclassified
160 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
161 2811994871 Arthrobacter sp. SLBN-179 Isolate Unclassified
162 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
163 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
164 2844849076 Arthrobacter cupressi DSM 24664 Isolate Rhizosphere
165 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
166 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
167 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
168 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
169 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
170 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
171 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
172 2910809715 Paenarthrobacter sp. CM16 Isolate Unclassified
173 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
174 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
175 2919391150 Arthrobacter ipis 2973 Isolate Unclassified
176 2919395869 Microbacterium resistens 2980 Isolate Unclassified
177 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
178 2939598168 Arthrobacter sp. 754 Isolate Rhizosphere
179 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
180 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
181 2945916053 Arthrobacter ulcerisalmonis W1I2 Isolate Rhizosphere
182 2945920336 Pseudarthrobacter siccitolerans W1I3 Isolate Rhizosphere
183 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
184 2945956166 Arthrobacter globiformus W2I3 Isolate Rhizosphere
185 2946037020 Arthrobacter sp. W4I7 Isolate Rhizosphere
186 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
187 2946059875 Arthrobacter sp. SLBN-112 Isolate Rhizosphere
188 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
189 2953998280 Pseudarthrobacter sp. W1I19 Isolate Rhizosphere
190 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
191 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
192 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
193 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.42
Metatranscriptomes 0
Isolates 15.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.87
Nodule 0
Rhizoplane 9.97
Rhizosphere 78.82
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100050205 3300031548 Bacteria 2999
2 LJQas_1002105 3300000549 Bacteria 2828
3 Ga0065714_10168213 3300005288 Bacteria 1017
4 Ga0070677_10021139 3300005333 Bacteria 2384
5 Ga0070666_10050311 3300005335 Bacteria 2802
6 Ga0070668_100048416 3300005347 Bacteria 3268
7 Ga0070669_100006273 3300005353 Bacteria 8580
8 Ga0070671_100035950 3300005355 Bacteria 4105
9 Ga0070674_100012832 3300005356 Bacteria 5157
10 Ga0070667_100028059 3300005367 Bacteria 4685
11 Ga0070678_100028220 3300005456 Bacteria 3824
12 Ga0070672_100394054 3300005543 Bacteria 1186
13 Ga0075432_10034542 3300006058 Bacteria 1756
14 Ga0105251_10005284 3300009011 Bacteria 8495
15 Ga0105244_10021700 3300009036 Bacteria 3546
16 Ga0105244_10133689 3300009036 Bacteria 1196
17 Ga0105245_10037606 3300009098 Bacteria 4303
18 Ga0105243_10020767 3300009148 Bacteria 4983
19 Ga0105248_10229725 3300009177 Bacteria 2089
20 Ga0105246_10000457 3300011119 Bacteria 21903
21 Ga0105246_10681238 3300011119 Bacteria 899
22 Ga0157373_10014721 3300013100 Bacteria 5731
23 Ga0157371_10007982 3300013102 Bacteria 8487
24 Ga0157370_10490410 3300013104 Bacteria 1129
25 Ga0157369_10049413 3300013105 Bacteria 4560
26 Ga0157369_10180003 3300013105 Bacteria 2224
27 Ga0157369_10347934 3300013105 Bacteria 1539
28 Ga0163162_10079531 3300013306 Bacteria 3345
29 Ga0163162_10278542 3300013306 Bacteria 1805
30 Ga0163162_10427860 3300013306 Bacteria 1456
31 Ga0157375_10917133 3300013308 Bacteria 1019
32 Ga0163161_10082641 3300017792 Bacteria 2367
33 Ga0209148_1003581 3300025254 Bacteria 4196
34 Ga0209051_1034898 3300025303 Bacteria 1878
35 Ga0207697_10005011 3300025315 Bacteria 6225
36 Ga0207655_1010769 3300025728 Bacteria 5517
37 Ga0207655_1015507 3300025728 Bacteria 4227
38 Ga0207682_10012580 3300025893 Bacteria 3302
39 Ga0207645_10003159 3300025907 Bacteria 12611
40 Ga0207687_10068095 3300025927 Bacteria 2535
41 Ga0207709_10192274 3300025935 Bacteria 1451
42 Ga0207669_10038308 3300025937 Bacteria 2759
43 Ga0207691_10005461 3300025940 Bacteria 12272
44 Ga0207711_10063891 3300025941 Bacteria 3179
45 Ga0207712_10258557 3300025961 Bacteria 1411
46 Ga0207668_10063067 3300025972 Bacteria 2613
47 Ga0207683_10016064 3300026121 Bacteria 6370
48 Ga0207683_10306246 3300026121 Bacteria 1454
49 Ga0207428_10020526 3300027907 Bacteria 5611
50 Ga0207428_10322909 3300027907 Bacteria 1140
51 Ga0307408_100023944 3300031548 Bacteria 4163
52 Ga0307408_100169176 3300031548 Bacteria 1743
53 Ga0307408_100409799 3300031548 Bacteria 1166
54 Ga0307405_10002352 3300031731 Bacteria 8318
55 Ga0307405_10007051 3300031731 Bacteria 5588
56 Ga0307405_10035110 3300031731 Bacteria 2991
57 Ga0307405_10038491 3300031731 Bacteria 2883
58 Ga0307405_10041114 3300031731 Bacteria 2804
59 Ga0307405_10106704 3300031731 Bacteria 1889
60 Ga0307405_10328247 3300031731 Bacteria 1171
61 Ga0307413_10009711 3300031824 Bacteria 4619
62 Ga0307413_10035471 3300031824 Bacteria 2861
63 Ga0307413_10148813 3300031824 Bacteria 1629
64 Ga0307410_10000501 3300031852 Bacteria 15930
65 Ga0307410_10002730 3300031852 Bacteria 8627
66 Ga0307410_10018240 3300031852 Bacteria 4237
67 Ga0307410_10025352 3300031852 Bacteria 3719
68 Ga0307410_10061470 3300031852 Bacteria 2571
69 Ga0307410_10108497 3300031852 Bacteria 2005
70 Ga0307406_10029686 3300031901 Bacteria 3313
71 Ga0307406_10040662 3300031901 Bacteria 2892
72 Ga0307406_10497884 3300031901 Bacteria 987
73 Ga0307407_10009880 3300031903 Bacteria 4467
74 Ga0307407_10034537 3300031903 Bacteria 2770
75 Ga0307407_10035490 3300031903 Bacteria 2740
76 Ga0307407_10092014 3300031903 Bacteria 1861
77 Ga0307407_10114057 3300031903 Bacteria 1702
78 Ga0307407_10166798 3300031903 Bacteria 1446
79 Ga0307412_10002053 3300031911 Bacteria 11173
80 Ga0307412_10012309 3300031911 Bacteria 4982
81 Ga0307412_10037544 3300031911 Bacteria 3113
82 Ga0307412_10042268 3300031911 Bacteria 2961
83 Ga0307412_10077307 3300031911 Bacteria 2289
84 Ga0307412_10078128 3300031911 Bacteria 2278
85 Ga0307412_10113915 3300031911 Bacteria 1935
86 Ga0307412_10167528 3300031911 Bacteria 1639
87 Ga0307412_10709095 3300031911 Bacteria 864
88 Ga0307409_100004883 3300031995 Bacteria 7623
89 Ga0307409_100022786 3300031995 Bacteria 4322
90 Ga0307409_100049690 3300031995 Bacteria 3199
91 Ga0307409_100067305 3300031995 Bacteria 2828
92 Ga0307409_100102445 3300031995 Bacteria 2378
93 Ga0307409_100207279 3300031995 Bacteria 1759
94 Ga0307409_100240244 3300031995 Bacteria 1648
95 Ga0307409_100611578 3300031995 Bacteria 1078
96 Ga0307416_100001484 3300032002 Bacteria 12768
97 Ga0307416_100072645 3300032002 Bacteria 2864
98 Ga0307416_100074066 3300032002 Bacteria 2842
99 Ga0307416_100081564 3300032002 Bacteria 2735
100 Ga0307416_100099987 3300032002 Bacteria 2521
101 Ga0307416_100128854 3300032002 Bacteria 2272
102 Ga0307416_100501205 3300032002 Bacteria 1278
103 Ga0307416_100515868 3300032002 Bacteria 1262
104 Ga0307416_100991509 3300032002 Bacteria 943
105 Ga0307414_10006997 3300032004 Bacteria 6322
106 Ga0307414_10368532 3300032004 Bacteria 1238
107 Ga0307411_10039814 3300032005 Bacteria 2976
108 Ga0307411_10097594 3300032005 Bacteria 2069
109 Ga0307411_10117278 3300032005 Bacteria 1918
110 Ga0307415_100080897 3300032126 Bacteria 2319
111 Ga0307415_100118556 3300032126 Bacteria 1979
112 Ga0307415_100160144 3300032126 Bacteria 1743
113 Ga0395899_0006081 3300037312 Bacteria 9363
114 Ga0395899_0017619 3300037312 Bacteria 5439
115 Ga0395899_0033314 3300037312 Bacteria 3869
116 Ga0395899_0209741 3300037312 Bacteria 1354
117 Ga0395899_0378556 3300037312 Bacteria 941
118 Ga0395900_0026391 3300037418 Bacteria 5947
119 Ga0395900_0080591 3300037418 Bacteria 3345
120 Ga0395900_0103506 3300037418 Bacteria 2924
121 Ga0395900_0578877 3300037418 Bacteria 1065
122 Ga0395900_0604320 3300037418 Bacteria 1037
123 Ga0395898_0029139 3300037466 Bacteria 5530
124 Ga0395898_0048380 3300037466 Bacteria 4170
125 Ga0395898_0075519 3300037466 Bacteria 3255
126 Ga0395898_0108994 3300037466 Bacteria 2655
127 Ga0395898_0124993 3300037466 Bacteria 2464
128 Ga0395898_0127093 3300037466 Bacteria 2442
129 Ga0395905_0162286 3300037471 Bacteria 2100
130 Ga0395901_0002279 3300038443 Bacteria 19564
131 Ga0395901_0165574 3300038443 Bacteria 2321
132 Ga0395901_0183398 3300038443 Bacteria 2195
133 Ga0395901_0376677 3300038443 Bacteria 1461
134 Ga0439438_018532 3300041405 Bacteria 1981
135 Ga0439466_0010639 3300041411 Bacteria 3420
136 Ga0451837_0189325 3300041494 Bacteria 1539
137 Ga0439433_0003750 3300041999 Bacteria 3265
138 Ga0439433_0008530 3300041999 Bacteria 2224
139 Ga0439433_0009748 3300041999 Bacteria 2096
140 Ga0439442_000036 3300042002 Bacteria 30155
141 Ga0439442_000272 3300042002 Bacteria 12623
142 Ga0439432_007364 3300042006 Bacteria 3900
143 Ga0439449_0004471 3300042007 Bacteria 5398
144 Ga0439449_0012421 3300042007 Bacteria 3202
145 Ga0439449_0018227 3300042007 Bacteria 2634
146 Ga0439449_0067550 3300042007 Bacteria 1318
147 Ga0439449_0153980 3300042007 Bacteria 857
148 Ga0439457_007830 3300042014 Bacteria 2547
149 Ga0439462_0007158 3300042015 Bacteria 2791
150 Ga0450911_009696 3300042115 Bacteria 1345
151 Ga0450920_000219 3300042122 Bacteria 8568
152 Ga0450907_000471 3300042146 Bacteria 11459
153 Ga0450908_028768 3300042184 Bacteria 967
154 Ga0439434_0000362 3300042435 Bacteria 13052
155 Ga0450918_000509 3300042531 Bacteria 8335
156 Ga0466965_0078432 3300044683 Bacteria 1668
157 Ga0466966_0342698 3300044684 Bacteria 898
158 Ga0466961_0270947 3300044693 Bacteria 1040
159 Ga0495653_0001613 3300046463 Bacteria 17714
160 Ga0495582_0011569 3300046473 Bacteria 4862
161 Ga0495582_0068734 3300046473 Bacteria 1958
162 Ga0495639_0009909 3300046475 Bacteria 4092
163 Ga0495662_0028511 3300046476 Bacteria 2694
164 Ga0495664_0004909 3300046477 Bacteria 7317
165 Ga0495594_0024467 3300046499 Bacteria 3244
166 Ga0495630_0070357 3300046517 Bacteria 2633
167 Ga0495631_0020616 3300046518 Bacteria 3078
168 Ga0495642_0059206 3300046528 Bacteria 1587
169 Ga0495654_0188203 3300046530 Bacteria 890
170 Ga0495665_0000402 3300046531 Bacteria 21980
171 Ga0495586_0002397 3300046535 Bacteria 10181
172 Ga0495586_0003775 3300046535 Bacteria 8117
173 Ga0495586_0003929 3300046535 Bacteria 7974
174 Ga0495586_0238045 3300046535 Bacteria 1037
175 Ga0495587_0003592 3300046536 Bacteria 10325
176 Ga0495645_0000495 3300046543 Bacteria 27241
177 Ga0495633_0038153 3300046558 Bacteria 2296
178 Ga0495667_0000098 3300046559 Bacteria 62781
179 Ga0495656_0001487 3300046615 Bacteria 7670
180 Ga0495656_0026624 3300046615 Bacteria 2304
181 Ga0495659_0008723 3300046664 Bacteria 3228
182 Ga0495661_0096144 3300046665 Bacteria 1676
183 Ga0495588_0014524 3300046674 Bacteria 3771
184 Ga0495588_0014787 3300046674 Bacteria 3743
185 Ga0495588_0048511 3300046674 Bacteria 2181
186 Ga0495657_0044652 3300046675 Bacteria 3013
187 Ga0495623_0162215 3300046679 Bacteria 1313
188 Ga0495670_0002695 3300046691 Bacteria 8770
189 Ga0495670_0038076 3300046691 Bacteria 2397
190 Ga0495670_0094121 3300046691 Bacteria 1536
191 Ga0495600_0014881 3300046809 Bacteria 4909
192 Ga0495600_0363983 3300046809 Bacteria 904
193 Ga0495581_0012376 3300047315 Bacteria 4942
194 Ga0495581_0012732 3300047315 Bacteria 4871
195 Ga0495581_0042507 3300047315 Bacteria 2630
196 Ga0495581_0102357 3300047315 Bacteria 1664
197 Ga0495680_0153481 3300047322 Bacteria 1677
198 Ga0495680_0415457 3300047322 Bacteria 926
199 Ga0495675_0008849 3300047444 Bacteria 6250
200 Ga0495675_0106827 3300047444 Bacteria 1749
201 Ga0495677_0019484 3300047445 Bacteria 2460
202 Ga0495685_069393 3300047447 Bacteria 1182
203 Ga0495681_0023183 3300047470 Bacteria 3303
204 Ga0495684_0156178 3300047471 Bacteria 1704
205 Ga0496100_0004524 3300048903 Bacteria 7383
206 Ga0496101_0010358 3300048904 Bacteria 6155
207 Ga0496101_0075726 3300048904 Bacteria 2477
208 Ga0496101_0085018 3300048904 Bacteria 2343
209 Ga0496102_0010902 3300048905 Bacteria 7828
210 Ga0496102_0119873 3300048905 Bacteria 2456
211 Ga0496102_0154692 3300048905 Bacteria 2155
212 Ga0496102_0273198 3300048905 Bacteria 1593
213 Ga0496103_0019410 3300048906 Bacteria 4082
214 Ga0496104_0067968 3300048907 Bacteria 3385
215 Ga0496104_0261196 3300048907 Bacteria 1644
216 Ga0496105_0072255 3300048908 Bacteria 2851
217 Ga0496105_0108979 3300048908 Bacteria 2286
218 Ga0496106_0009220 3300048909 Bacteria 7289
219 Ga0496106_0066042 3300048909 Bacteria 2754
220 Ga0496107_0012617 3300048910 Bacteria 5900
221 Ga0496107_0029381 3300048910 Bacteria 3909
222 Ga0496107_0125806 3300048910 Bacteria 1890
223 Ga0496108_0284088 3300048911 Bacteria 1440
224 Ga0496109_0089846 3300048912 Bacteria 2841
225 Ga0496109_0128826 3300048912 Bacteria 2361
226 Ga0496109_0364744 3300048912 Bacteria 1364
227 Ga0496110_0008346 3300048913 Bacteria 8334
228 Ga0496110_0297739 3300048913 Bacteria 1469
229 Ga0496111_0322253 3300048914 Bacteria 1144
230 Ga0496112_0075075 3300048915 Bacteria 3343
231 Ga0496113_0035620 3300048916 Bacteria 3640
232 Ga0496113_0121473 3300048916 Bacteria 2043
233 Ga0496113_0201175 3300048916 Bacteria 1583
234 Ga0496114_0036924 3300048917 Bacteria 4039
235 Ga0496114_0080684 3300048917 Bacteria 2747
236 Ga0496114_0149099 3300048917 Bacteria 2029
237 Ga0496117_0148029 3300048920 Bacteria 1394
238 Ga0496119_0108449 3300048922 Bacteria 1546
239 Ga0496124_0207509 3300048927 Bacteria 1485
240 Ga0496125_0082652 3300048928 Bacteria 2447
241 Ga0501034_0002817 3300049571 Bacteria 20325
242 Ga0501034_0028980 3300049571 Bacteria 5630
243 Ga0501034_0034459 3300049571 Bacteria 5132
244 Ga0501034_0079279 3300049571 Bacteria 3288
245 Ga0501034_0110445 3300049571 Bacteria 2740
246 Ga0501034_0164557 3300049571 Bacteria 2187
247 Ga0501034_0172758 3300049571 Bacteria 2127
248 Ga0501034_0629483 3300049571 Bacteria 976
249 Ga0501037_0010949 3300049573 Bacteria 6668
250 Ga0501037_0021043 3300049573 Bacteria 4819
251 Ga0501038_0025088 3300049574 Bacteria 5314
252 Ga0501038_0301484 3300049574 Bacteria 1257
253 Ga0501038_0409018 3300049574 Bacteria 1048
254 Ga0501039_0073052 3300049575 Bacteria 2665
255 Ga0501043_0093709 3300049579 Bacteria 2361
256 Ga0501047_0004541 3300049581 Bacteria 13047
257 Ga0501067_0042921 3300049583 Bacteria 2512
258 Ga0501070_0001157 3300049586 Bacteria 23615
259 Ga0501070_0001717 3300049586 Bacteria 19377
260 Ga0501072_0249839 3300049588 Bacteria 1412
261 Ga0501073_0019763 3300049589 Bacteria 4861
262 Ga0501073_0022278 3300049589 Bacteria 4564
263 Ga0501077_0120678 3300049593 Bacteria 1661
264 Ga0501080_0000179 3300049742 Bacteria 46276
265 Ga0501083_0031211 3300049744 Bacteria 3657
266 Ga0501044_0279697 3300049823 Bacteria 1603
267 Ga0500593_088245 3300053117 Bacteria 1317
268 Ga0500568_0006928 3300053139 Bacteria 5625
269 Ga0500616_0000192 3300053153 Bacteria 100229
270 Ga0500645_002471 3300053730 Bacteria 8206
271 Ga0501084_0322646 3300054114 Bacteria 1304
272 2537901353 2537561592 Bacteria 4348607
273 2643733956 2643221542 Bacteria 3563959
274 2643876051 2643221572 Bacteria 3614809
275 2644170537 2643221630 Bacteria 3601215
276 2644383106 2643221669 Bacteria 3611286
277 2747954875 2747842429 Bacteria 3914386
278 2774399185 2773857763 Bacteria 4180068
279 2775657709 2775506735 Bacteria 4556596
280 2808629871 2808606306 Bacteria 3608896
281 2808829775 2808606357 Bacteria 4466944
282 2808850956 2808606360 Bacteria 4404006
283 2808876538 2808606366 Bacteria 4415912
284 2808894028 2808606370 Bacteria 4942454
285 2808898038 2808606371 Bacteria 4251511
286 2808902977 2808606372 Bacteria 4649509
287 2809227651 2808606447 Bacteria 3572005
288 2812318524 2811994871 Bacteria 4497550
289 2821270279 2821268502 Bacteria 3750023
290 2833711238 2833709550 Bacteria 4008291
291 2844851327 2844849076 Bacteria 4091819
292 2852634416 2852632344 Bacteria 3463163
293 2852664928 2852663356 Bacteria 4090475
294 2857723518 2857723135 Bacteria 4217853
295 2857744263 2857740372 Bacteria 4782044
296 2895660243 2895660088 Bacteria 3782833
297 2904497551 2904497146 Bacteria 4731781
298 2904780100 2904776348 Bacteria 4658726
299 2910814061 2910809715 Bacteria 4982797
300 2910814506 2910809715 Bacteria 4982797
301 2919038961 2919034639 Bacteria 4763403
302 2919062064 2919059106 Bacteria 4991624
303 2919391864 2919391150 Bacteria 4884741
304 2919396310 2919395869 Bacteria 3704152
305 2933421502 2933418574 Bacteria 4476724
306 2939600824 2939598168 Bacteria 4687164
307 2939647566 2939647034 Bacteria 4681660
308 2939676384 2939674588 Bacteria 4844420
309 2945916285 2945916053 Bacteria 4555517
310 2945923580 2945920336 Bacteria 4501603
311 2945944754 2945941187 Bacteria 4682474
312 2945957023 2945956166 Bacteria 5110334
313 2946040693 2946037020 Bacteria 4900426
314 2946043893 2946041624 Bacteria 4191385
315 2946060079 2946059875 Bacteria 4386623
316 2946081223 2946080515 Bacteria 4310960
317 2954001933 2953998280 Bacteria 4812144
318 2974304228 2974302888 Bacteria 4369871
319 8004028262 8004025490 Bacteria 4327753
320 8004185428 8004182704 Bacteria 3391155
321 8054109133 8054107350 Bacteria 5022511
322 Ga0307408_100050205
323 LJQas_1002105
324 Ga0065714_10168213
325 Ga0070677_10021139
326 Ga0070666_10050311
327 Ga0070668_100048416
328 Ga0070669_100006273
329 Ga0070671_100035950
330 Ga0070674_100012832
331 Ga0070667_100028059
332 Ga0070678_100028220
333 Ga0070672_100394054
334 Ga0075432_10034542
335 Ga0105251_10005284
336 Ga0105244_10021700
337 Ga0105244_10133689
338 Ga0105245_10037606
339 Ga0105243_10020767
340 Ga0105248_10229725
341 Ga0105246_10000457
342 Ga0105246_10681238
343 Ga0157373_10014721
344 Ga0157371_10007982
345 Ga0157370_10490410
346 Ga0157369_10049413
347 Ga0157369_10180003
348 Ga0157369_10347934
349 Ga0163162_10079531
350 Ga0163162_10278542
351 Ga0163162_10427860
352 Ga0157375_10917133
353 Ga0163161_10082641
354 Ga0209148_1003581
355 Ga0209051_1034898
356 Ga0207697_10005011
357 Ga0207655_1010769
358 Ga0207655_1015507
359 Ga0207682_10012580
360 Ga0207645_10003159
361 Ga0207687_10068095
362 Ga0207709_10192274
363 Ga0207669_10038308
364 Ga0207691_10005461
365 Ga0207711_10063891
366 Ga0207712_10258557
367 Ga0207668_10063067
368 Ga0207683_10016064
369 Ga0207683_10306246
370 Ga0207428_10020526
371 Ga0207428_10322909
372 Ga0307408_100023944
373 Ga0307408_100169176
374 Ga0307408_100409799
375 Ga0307405_10002352
376 Ga0307405_10007051
377 Ga0307405_10035110
378 Ga0307405_10038491
379 Ga0307405_10041114
380 Ga0307405_10106704
381 Ga0307405_10328247
382 Ga0307413_10009711
383 Ga0307413_10035471
384 Ga0307413_10148813
385 Ga0307410_10000501
386 Ga0307410_10002730
387 Ga0307410_10018240
388 Ga0307410_10025352
389 Ga0307410_10061470
390 Ga0307410_10108497
391 Ga0307406_10029686
392 Ga0307406_10040662
393 Ga0307406_10497884
394 Ga0307407_10009880
395 Ga0307407_10034537
396 Ga0307407_10035490
397 Ga0307407_10092014
398 Ga0307407_10114057
399 Ga0307407_10166798
400 Ga0307412_10002053
401 Ga0307412_10012309
402 Ga0307412_10037544
403 Ga0307412_10042268
404 Ga0307412_10077307
405 Ga0307412_10078128
406 Ga0307412_10113915
407 Ga0307412_10167528
408 Ga0307412_10709095
409 Ga0307409_100004883
410 Ga0307409_100022786
411 Ga0307409_100049690
412 Ga0307409_100067305
413 Ga0307409_100102445
414 Ga0307409_100207279
415 Ga0307409_100240244
416 Ga0307409_100611578
417 Ga0307416_100001484
418 Ga0307416_100072645
419 Ga0307416_100074066
420 Ga0307416_100081564
421 Ga0307416_100099987
422 Ga0307416_100128854
423 Ga0307416_100501205
424 Ga0307416_100515868
425 Ga0307416_100991509
426 Ga0307414_10006997
427 Ga0307414_10368532
428 Ga0307411_10039814
429 Ga0307411_10097594
430 Ga0307411_10117278
431 Ga0307415_100080897
432 Ga0307415_100118556
433 Ga0307415_100160144
434 Ga0395899_0006081
435 Ga0395899_0017619
436 Ga0395899_0033314
437 Ga0395899_0209741
438 Ga0395899_0378556
439 Ga0395900_0026391
440 Ga0395900_0080591
441 Ga0395900_0103506
442 Ga0395900_0578877
443 Ga0395900_0604320
444 Ga0395898_0029139
445 Ga0395898_0048380
446 Ga0395898_0075519
447 Ga0395898_0108994
448 Ga0395898_0124993
449 Ga0395898_0127093
450 Ga0395905_0162286
451 Ga0395901_0002279
452 Ga0395901_0165574
453 Ga0395901_0183398
454 Ga0395901_0376677
455 Ga0439438_018532
456 Ga0439466_0010639
457 Ga0451837_0189325
458 Ga0439433_0003750
459 Ga0439433_0008530
460 Ga0439433_0009748
461 Ga0439442_000036
462 Ga0439442_000272
463 Ga0439432_007364
464 Ga0439449_0004471
465 Ga0439449_0012421
466 Ga0439449_0018227
467 Ga0439449_0067550
468 Ga0439449_0153980
469 Ga0439457_007830
470 Ga0439462_0007158
471 Ga0450911_009696
472 Ga0450920_000219
473 Ga0450907_000471
474 Ga0450908_028768
475 Ga0439434_0000362
476 Ga0450918_000509
477 Ga0466965_0078432
478 Ga0466966_0342698
479 Ga0466961_0270947
480 Ga0495653_0001613
481 Ga0495582_0011569
482 Ga0495582_0068734
483 Ga0495639_0009909
484 Ga0495662_0028511
485 Ga0495664_0004909
486 Ga0495594_0024467
487 Ga0495630_0070357
488 Ga0495631_0020616
489 Ga0495642_0059206
490 Ga0495654_0188203
491 Ga0495665_0000402
492 Ga0495586_0002397
493 Ga0495586_0003775
494 Ga0495586_0003929
495 Ga0495586_0238045
496 Ga0495587_0003592
497 Ga0495645_0000495
498 Ga0495633_0038153
499 Ga0495667_0000098
500 Ga0495656_0001487
501 Ga0495656_0026624
502 Ga0495659_0008723
503 Ga0495661_0096144
504 Ga0495588_0014524
505 Ga0495588_0014787
506 Ga0495588_0048511
507 Ga0495657_0044652
508 Ga0495623_0162215
509 Ga0495670_0002695
510 Ga0495670_0038076
511 Ga0495670_0094121
512 Ga0495600_0014881
513 Ga0495600_0363983
514 Ga0495581_0012376
515 Ga0495581_0012732
516 Ga0495581_0042507
517 Ga0495581_0102357
518 Ga0495680_0153481
519 Ga0495680_0415457
520 Ga0495675_0008849
521 Ga0495675_0106827
522 Ga0495677_0019484
523 Ga0495685_069393
524 Ga0495681_0023183
525 Ga0495684_0156178
526 Ga0496100_0004524
527 Ga0496101_0010358
528 Ga0496101_0075726
529 Ga0496101_0085018
530 Ga0496102_0010902
531 Ga0496102_0119873
532 Ga0496102_0154692
533 Ga0496102_0273198
534 Ga0496103_0019410
535 Ga0496104_0067968
536 Ga0496104_0261196
537 Ga0496105_0072255
538 Ga0496105_0108979
539 Ga0496106_0009220
540 Ga0496106_0066042
541 Ga0496107_0012617
542 Ga0496107_0029381
543 Ga0496107_0125806
544 Ga0496108_0284088
545 Ga0496109_0089846
546 Ga0496109_0128826
547 Ga0496109_0364744
548 Ga0496110_0008346
549 Ga0496110_0297739
550 Ga0496111_0322253
551 Ga0496112_0075075
552 Ga0496113_0035620
553 Ga0496113_0121473
554 Ga0496113_0201175
555 Ga0496114_0036924
556 Ga0496114_0080684
557 Ga0496114_0149099
558 Ga0496117_0148029
559 Ga0496119_0108449
560 Ga0496124_0207509
561 Ga0496125_0082652
562 Ga0501034_0002817
563 Ga0501034_0028980
564 Ga0501034_0034459
565 Ga0501034_0079279
566 Ga0501034_0110445
567 Ga0501034_0164557
568 Ga0501034_0172758
569 Ga0501034_0629483
570 Ga0501037_0010949
571 Ga0501037_0021043
572 Ga0501038_0025088
573 Ga0501038_0301484
574 Ga0501038_0409018
575 Ga0501039_0073052
576 Ga0501043_0093709
577 Ga0501047_0004541
578 Ga0501067_0042921
579 Ga0501070_0001157
580 Ga0501070_0001717
581 Ga0501072_0249839
582 Ga0501073_0019763
583 Ga0501073_0022278
584 Ga0501077_0120678
585 Ga0501080_0000179
586 Ga0501083_0031211
587 Ga0501044_0279697
588 Ga0500593_088245
589 Ga0500568_0006928
590 Ga0500616_0000192
591 Ga0500645_002471
592 Ga0501084_0322646
593 2537901353
594 2643733956
595 2643876051
596 2644170537
597 2644383106
598 2747954875
599 2774399185
600 2775657709
601 2808629871
602 2808829775
603 2808850956
604 2808876538
605 2808894028
606 2808898038
607 2808902977
608 2809227651
609 2812318524
610 2821270279
611 2833711238
612 2844851327
613 2852634416
614 2852664928
615 2857723518
616 2857744263
617 2895660243
618 2904497551
619 2904780100
620 2910814061
621 2910814506
622 2919038961
623 2919062064
624 2919391864
625 2919396310
626 2933421502
627 2939600824
628 2939647566
629 2939676384
630 2945916285
631 2945923580
632 2945944754
633 2945957023
634 2946040693
635 2946043893
636 2946060079
637 2946081223
638 2954001933
639 2974304228
640 8004028262
641 8004185428
642 8054109133

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09339

HTH_IclR

IclR helix-turn-helix domain

61

112

0.95

PF01614

IclR

Bacterial transcriptional regulator

129

301

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
4awx-assembly1.cif.gz_B moonlighting functions of feoc in the regulation of ferrous iron transport in feo 0.9421 30 70
8a3t-assembly1.cif.gz_T s. cerevisiae apc/c-cdh1 complex 0.9155 29 69
7wqu-assembly1.cif.gz_B feoc from klebsiella pneumoniae 0.908 31 70
2qww-assembly3.cif.gz_F crystal structure of multiple antibiotic-resistance repressor (marr) (yp_013417.1) from listeria monocytogenes 4b f2365 at 2.07 a resolution 0.9047 14 70
4wcg-assembly1.cif.gz_B the binding mode of cyprinid herpesvirus3 orf112-zalpha to z-dna 0.9021 13 69
ID Description Score Start End Superfamily
4awxB00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9421 30 70 1.10.10.10
2xroE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9414 11 76 1.10.10.10
2xroF01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9401 10 73 1.10.10.10
2xrnA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9397 11 71 1.10.10.10
af_O53238_2_75_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.933 8 78 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A0K8QB67-F1-model_v4 HTH-type transcriptional repressor AllR 0.9704 80 252 GO:0003677
GO:0003700
GO:0045892
AF-A0A0K8QB67-F1-model_v4 HTH-type transcriptional repressor AllR 0.9541 80 252 GO:0003677
GO:0003700
GO:0045892
AF-A0A1W6YJV4-F1-model_v4 IclR family transcriptional regulator 0.9347 12 254 GO:0003677
GO:0003700
GO:0045892
AF-A0A5P9FD51-F1-model_v4 Acetate operon repressor 0.9242 1 254 GO:0003677
GO:0003700
GO:0045892
AF-A0A5J6KVZ9-F1-model_v4 deleted 0.921 1 255

Map