F405686

General Info

Members Datasets Scaffolds Average Seq Length
320 225 296 369

Family's Representative Sequence

Representative Sequence 3300046648|Ga0495611_0061503|Ga0495611_0061503_63_1289
Length 408
Sequence MGASPSRERNKQIRTNQALQSNQGRGAAADTGTMNDAPDSDLAAVPCMLMRGGTSRGPFFLESDLPADPALRDRVLLAAMGSPDRRQIDGLGGAHPLTSKVGIVRPGTEAGVDLDFLFAQLQPDRDTVDTSPNCGNMLAAVLPFALERGLLPVGDGTTTARVLTLNTGMRCDVTVQTPNGRLQYTGAARIDGVPGTAAPISIDFLDTAGSVCPGLLPSGRVLDHIAVPGADGFEVDATLIDNGMPMVLVRAADMDVTGYETVAELNADAALKAKLEALRLTAGPLMGLGDVASRSYPKMCLVAAPRDGGSIATRCFIPHVCHEAIGVLAAVTVATACVLDGSVTQGIASVPAGPSKTVSVEHPTGEFSVELGLDANDPQKVVRAALLRTARPIMRGEVLISEQIWNGE

Samples

Sample ID Description Type Environment
1 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
2 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
3 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
4 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
5 2738541296 Paraburkholderia sp. GV073 Isolate Unclassified
6 2738541298 Paraburkholderia sp. GV068 Isolate Unclassified
7 2738541306 Paraburkholderia sp. GV052 Isolate Unclassified
8 2738543002 Paraburkholderia sp. GV072 Isolate Unclassified
9 2738543008 Paraburkholderia sp. GV060 Isolate Unclassified
10 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
11 2808606418 Herbaspirillum sp. SJZ107 Isolate Rhizosphere
12 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
13 2842711865 Duganella sp. R-73148 Isolate Unclassified
14 2856287931 Paraburkholderia bannensis BE22 Isolate Rhizosphere
15 2857357740 Paraburkholderia tropica BE15 Isolate Rhizosphere
16 2857553236 Duganella sp. R-74557 Isolate Unclassified
17 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
18 2904504865 Serratia marcescens 1822 Isolate Unclassified
19 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
20 2945934425 Paraburkholderia graminis W1I13 Isolate Rhizosphere
21 2990703756 Paraburkholderia graminis SLBN-33 Isolate Rhizosphere
22 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
23 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
24 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
25 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
26 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
27 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
28 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
29 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
30 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
31 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
32 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
33 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
34 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
35 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
36 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
37 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
42 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
43 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
48 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
53 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
56 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
57 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
58 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
59 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
62 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
75 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
77 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
78 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
79 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
80 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
81 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
82 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
83 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
84 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
85 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
88 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
89 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
90 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
91 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
92 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
93 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
95 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
96 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
97 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
98 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
101 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
105 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
106 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
107 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
108 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
109 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
110 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
111 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
112 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
113 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
114 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
115 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
116 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
117 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
118 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
119 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
120 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
121 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
122 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
123 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
124 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
125 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
126 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
127 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
128 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
129 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
130 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
131 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
132 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
133 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
134 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
135 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
136 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
137 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
138 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
139 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
140 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
141 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
142 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
143 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
144 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
145 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
146 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
147 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
148 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
149 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
150 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
151 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
152 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
153 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
154 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
155 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
156 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
157 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
158 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
159 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
160 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
161 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
162 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
163 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
164 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
165 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
166 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
167 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
168 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
169 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
170 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
171 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
172 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
173 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
174 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
175 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
176 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
177 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
178 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
179 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
180 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
181 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
182 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
183 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
184 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
185 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
186 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
187 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
188 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
189 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
190 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
191 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
192 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
193 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
194 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
195 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
196 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
197 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
198 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
199 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
200 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
201 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
202 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
203 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
204 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
205 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
206 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
207 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
208 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
209 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
210 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
211 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
212 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
213 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
214 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
215 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
216 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
218 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
219 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
220 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
221 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
222 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
223 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane
224 8055266321 Paraburkholderia rhynchosiae LMG 27174 Isolate Nodule
225 8055301274 Paraburkholderia kirstenboschensis LMG 28727 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.5
Metatranscriptomes 0
Isolates 7.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.06
Nodule 1.88
Rhizoplane 3.44
Rhizosphere 73.44
Stem 0
Stem Tuber 0
Unclassified 12.19

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1001371 3300002705 Bacteria 10448
2 JGI25165J46597_1000486 3300003214 Bacteria 38588
3 Ga0055533_1000069 3300003756 Bacteria 153904
4 Ga0055532_1000011 3300003758 Bacteria 385294
5 Ga0055527_1000009 3300003760 Bacteria 385294
6 Ga0055535_1000008 3300003761 Bacteria 385294
7 Ga0055542_1000014 3300003762 Bacteria 385294
8 Ga0055529_1000010 3300003763 Bacteria 385294
9 Ga0055537_1000060 3300003773 Bacteria 79376
10 Ga0055534_1000009 3300003784 Bacteria 210256
11 Ga0055528_1000012 3300003790 Bacteria 182704
12 Ga0065165_1001101 3300005262 Bacteria 32096
13 Ga0068869_100067079 3300005334 Bacteria 2646
14 Ga0068869_100221038 3300005334 Bacteria 1501
15 Ga0070687_100131586 3300005343 Bacteria 1445
16 Ga0070700_100181530 3300005441 Bacteria 1465
17 Ga0070694_100274530 3300005444 Bacteria 1283
18 Ga0068860_100000101 3300005843 Bacteria 142856
19 Ga0075365_10086273 3300006038 Bacteria 2133
20 Ga0075369_10047020 3300006186 Bacteria 1860
21 Ga0105247_10038533 3300009101 Bacteria 2918
22 Ga0105242_10339695 3300009176 Bacteria 1383
23 Ga0105239_10213099 3300010375 Bacteria 2165
24 Ga0157369_10085121 3300013105 Bacteria 3378
25 Ga0157369_10112282 3300013105 Bacteria 2895
26 Ga0157375_10246616 3300013308 Bacteria 1946
27 Ga0182008_10024550 3300014497 Bacteria 3068
28 Ga0213872_10007605 3300021361 Bacteria 5314
29 Ga0213872_10052789 3300021361 Bacteria 1844
30 Ga0209674_100011 3300025226 Bacteria 997175
31 Ga0209672_100002 3300025228 Bacteria 1733325
32 Ga0209147_100003 3300025229 Bacteria 1733325
33 Ga0209563_100359 3300025230 Bacteria 16912
34 Ga0207427_100366 3300025231 Bacteria 28009
35 Ga0209258_100005 3300025242 Bacteria 1087938
36 Ga0209148_1000006 3300025254 Bacteria 1733325
37 Ga0209759_1000006 3300025256 Bacteria 492407
38 Ga0209233_1000018 3300025261 Bacteria 886857
39 Ga0209565_1000015 3300025263 Bacteria 494091
40 Ga0209455_1000003 3300025272 Bacteria 1471893
41 Ga0209673_1000017 3300025273 Bacteria 492994
42 Ga0209675_1000012 3300025291 Bacteria 494061
43 Ga0209564_1000016 3300025295 Bacteria 613131
44 Ga0209256_1000314 3300025299 Bacteria 84164
45 Ga0207647_10058044 3300025904 Bacteria 2371
46 Ga0207699_10123363 3300025906 Bacteria 1679
47 Ga0207643_10085049 3300025908 Bacteria 1837
48 Ga0207705_10222245 3300025909 Bacteria 1435
49 Ga0207671_10021491 3300025914 Bacteria 4895
50 Ga0207662_10138194 3300025918 Bacteria 1541
51 Ga0207664_10254473 3300025929 Bacteria 1534
52 Ga0207689_10015226 3300025942 Bacteria 6511
53 Ga0207708_10209699 3300026075 Bacteria 1557
54 Ga0207702_10021218 3300026078 Bacteria 5376
55 Ga0207683_10263894 3300026121 Bacteria 1573
56 Ga0209371_1014485 3300027312 Bacteria 2159
57 Ga0268264_10000030 3300028381 Bacteria 418542
58 Ga0307515_10000494 3300028794 Bacteria 94354
59 Ga0307515_10006378 3300028794 Bacteria 23616
60 Ga0307515_10069247 3300028794 Bacteria 4828
61 Ga0316181_1129545 3300030744 Bacteria 1892
62 Ga0265330_10010969 3300031235 Bacteria 4257
63 Ga0265330_10078938 3300031235 Bacteria 1419
64 Ga0265332_10028981 3300031238 Bacteria 2421
65 Ga0265325_10002402 3300031241 Bacteria 12664
66 Ga0265340_10026205 3300031247 Bacteria 2948
67 Ga0265340_10056986 3300031247 Bacteria 1878
68 Ga0265339_10001335 3300031249 Bacteria 18436
69 Ga0307513_10015655 3300031456 Bacteria 9181
70 Ga0307513_10186357 3300031456 Bacteria 1932
71 Ga0307509_10021794 3300031507 Bacteria 7237
72 Ga0307509_10118233 3300031507 Bacteria 2634
73 Ga0307509_10134844 3300031507 Bacteria 2416
74 Ga0265313_10047311 3300031595 Bacteria 2083
75 Ga0307508_10000096 3300031616 Bacteria 103730
76 Ga0307514_10059508 3300031649 Bacteria 2918
77 Ga0265342_10023680 3300031712 Bacteria 3882
78 Ga0307516_10039313 3300031730 Bacteria 4716
79 Ga0307412_10000082 3300031911 Bacteria 93313
80 Ga0307507_10013349 3300033179 Bacteria 9983
81 Ga0307507_10075739 3300033179 Bacteria 3007
82 Ga0373934_0028483 3300035086 Bacteria 2177
83 Ga0373923_0008265 3300035111 Bacteria 3703
84 Ga0373936_0082049 3300035113 Bacteria 1343
85 Ga0373953_0000542 3300035117 Bacteria 10471
86 Ga0373954_0000323 3300035118 Bacteria 17518
87 Ga0373956_0009107 3300035119 Bacteria 4026
88 Ga0373957_0053966 3300035120 Bacteria 1542
89 Ga0373955_0003057 3300035172 Bacteria 7328
90 Ga0373927_0026860 3300035695 Bacteria 3762
91 Ga0373933_0001324 3300035724 Bacteria 14581
92 Ga0373937_0007329 3300036401 Bacteria 9549
93 Ga0373925_0056541 3300037068 Bacteria 2939
94 Ga0436361_0080901 3300039447 Bacteria 3046
95 Ga0436361_0761768 3300039447 Bacteria 9080
96 Ga0451855_1673813 3300041511 Bacteria 1443
97 Ga0466966_0029942 3300044684 Bacteria 3538
98 Ga0466961_0009705 3300044693 Bacteria 6126
99 Ga0466963_0206981 3300044694 Bacteria 1372
100 Ga0466964_0001512 3300044706 Bacteria 7984
101 Ga0466971_0001325 3300044719 Bacteria 10346
102 Ga0466970_0010401 3300044765 Bacteria 4724
103 Ga0466957_0111331 3300044842 Bacteria 1736
104 Ga0466959_0006379 3300045049 Bacteria 8166
105 Ga0495617_036482 3300046452 Bacteria 1648
106 Ga0495627_000007 3300046453 Bacteria 575915
107 Ga0495592_0100630 3300046454 Bacteria 2060
108 Ga0495590_0000008 3300046457 Bacteria 330520
109 Ga0495590_0000129 3300046457 Bacteria 44482
110 Ga0495590_0046032 3300046457 Bacteria 1522
111 Ga0495591_000043 3300046458 Bacteria 148885
112 Ga0495629_0007954 3300046459 Bacteria 7801
113 Ga0495629_0018501 3300046459 Bacteria 4986
114 Ga0495638_0010290 3300046460 Bacteria 6504
115 Ga0495638_0065519 3300046460 Bacteria 2236
116 Ga0495651_0014174 3300046462 Bacteria 6161
117 Ga0495653_0002557 3300046463 Bacteria 14498
118 Ga0495653_0012104 3300046463 Bacteria 7039
119 Ga0495653_0051904 3300046463 Bacteria 3145
120 Ga0495650_0004658 3300046471 Bacteria 9269
121 Ga0495650_0013175 3300046471 Bacteria 4390
122 Ga0495582_0006013 3300046473 Bacteria 6767
123 Ga0495582_0078125 3300046473 Bacteria 1835
124 Ga0495605_0005848 3300046474 Bacteria 7114
125 Ga0495605_0044395 3300046474 Bacteria 2198
126 Ga0495639_0046250 3300046475 Bacteria 1970
127 Ga0495584_0000025 3300046491 Bacteria 116731
128 Ga0495585_0018187 3300046492 Bacteria 4054
129 Ga0495585_0057090 3300046492 Bacteria 2155
130 Ga0495594_0019236 3300046499 Bacteria 3627
131 Ga0495594_0103617 3300046499 Bacteria 1601
132 Ga0495596_0004602 3300046500 Bacteria 6687
133 Ga0495596_0008019 3300046500 Bacteria 4722
134 Ga0495596_0019695 3300046500 Bacteria 2768
135 Ga0495596_0028698 3300046500 Bacteria 2232
136 Ga0495607_0056610 3300046501 Bacteria 2250
137 Ga0495583_0000011 3300046506 Bacteria 350215
138 Ga0495583_0000512 3300046506 Bacteria 55428
139 Ga0495583_0004680 3300046506 Bacteria 9645
140 Ga0495583_0021509 3300046506 Bacteria 3316
141 Ga0495583_0035902 3300046506 Bacteria 2361
142 Ga0495606_0004752 3300046507 Bacteria 13378
143 Ga0495606_0076342 3300046507 Bacteria 2094
144 Ga0495606_0114502 3300046507 Bacteria 1622
145 Ga0495608_0012098 3300046511 Bacteria 5998
146 Ga0495608_0032622 3300046511 Bacteria 3520
147 Ga0495610_0000947 3300046512 Bacteria 26928
148 Ga0495610_0002865 3300046512 Bacteria 14003
149 Ga0495610_0012368 3300046512 Bacteria 5144
150 Ga0495610_0032601 3300046512 Bacteria 2704
151 Ga0495610_0074468 3300046512 Bacteria 1575
152 Ga0495616_0000107 3300046513 Bacteria 72253
153 Ga0495616_0000150 3300046513 Bacteria 60876
154 Ga0495616_0001459 3300046513 Bacteria 16445
155 Ga0495616_0020120 3300046513 Bacteria 3636
156 Ga0495616_0137246 3300046513 Bacteria 1116
157 Ga0495618_0014381 3300046514 Bacteria 4821
158 Ga0495628_0110865 3300046516 Bacteria 2110
159 Ga0495628_0124628 3300046516 Bacteria 1974
160 Ga0495630_0020232 3300046517 Bacteria 4905
161 Ga0495631_0000337 3300046518 Bacteria 32281
162 Ga0495631_0018991 3300046518 Bacteria 3229
163 Ga0495632_0000109 3300046519 Bacteria 85257
164 Ga0495632_0000115 3300046519 Bacteria 81715
165 Ga0495632_0028756 3300046519 Bacteria 2899
166 Ga0495637_0000009 3300046520 Bacteria 402028
167 Ga0495643_0000028 3300046522 Bacteria 262886
168 Ga0495643_0001116 3300046522 Bacteria 26592
169 Ga0495643_0003017 3300046522 Bacteria 12656
170 Ga0495643_0020548 3300046522 Bacteria 3805
171 Ga0495643_0027465 3300046522 Bacteria 3197
172 Ga0495644_0027030 3300046523 Bacteria 2175
173 Ga0495648_0017897 3300046524 Bacteria 5047
174 Ga0495666_0003121 3300046526 Bacteria 8328
175 Ga0495642_0000611 3300046528 Bacteria 17994
176 Ga0495652_0082676 3300046529 Bacteria 2645
177 Ga0495652_0101223 3300046529 Bacteria 2336
178 Ga0495654_0005383 3300046530 Bacteria 7445
179 Ga0495665_0015163 3300046531 Bacteria 4154
180 Ga0495640_0056229 3300046533 Bacteria 2688
181 Ga0495587_0005573 3300046536 Bacteria 8216
182 Ga0495587_0015245 3300046536 Bacteria 4802
183 Ga0495587_0041831 3300046536 Bacteria 2734
184 Ga0495609_0000647 3300046538 Bacteria 27112
185 Ga0495621_0011400 3300046539 Bacteria 2748
186 Ga0495597_0000762 3300046542 Bacteria 25455
187 Ga0495645_0114611 3300046543 Bacteria 1904
188 Ga0495622_0000092 3300046557 Bacteria 80637
189 Ga0495633_0000181 3300046558 Bacteria 82164
190 Ga0495633_0000925 3300046558 Bacteria 24854
191 Ga0495633_0004718 3300046558 Bacteria 8568
192 Ga0495668_0000018 3300046616 Bacteria 417480
193 Ga0495668_0004203 3300046616 Bacteria 10382
194 Ga0495668_0094643 3300046616 Bacteria 1635
195 Ga0495634_0011966 3300046642 Bacteria 6295
196 Ga0495634_0013304 3300046642 Bacteria 5947
197 Ga0495634_0018282 3300046642 Bacteria 4991
198 Ga0495611_0061503 3300046648 Bacteria 1707
199 Ga0495625_0062259 3300046660 Bacteria 2638
200 Ga0495625_0147795 3300046660 Bacteria 1581
201 Ga0495635_0006348 3300046663 Bacteria 8242
202 Ga0495635_0009795 3300046663 Bacteria 6699
203 Ga0495661_0000292 3300046665 Bacteria 56829
204 Ga0495661_0019260 3300046665 Bacteria 4476
205 Ga0495661_0021365 3300046665 Bacteria 4221
206 Ga0495661_0102290 3300046665 Bacteria 1610
207 Ga0495661_0123968 3300046665 Bacteria 1423
208 Ga0495588_0077721 3300046674 Bacteria 1731
209 Ga0495657_0100215 3300046675 Bacteria 1846
210 Ga0495599_0004863 3300046678 Bacteria 7993
211 Ga0495599_0054892 3300046678 Bacteria 2496
212 Ga0495623_0005974 3300046679 Bacteria 7930
213 Ga0495623_0019869 3300046679 Bacteria 4343
214 Ga0495646_0008308 3300046680 Bacteria 6600
215 Ga0495646_0035121 3300046680 Bacteria 3110
216 Ga0495669_0000304 3300046684 Bacteria 27214
217 Ga0495670_0005476 3300046691 Bacteria 6230
218 Ga0495649_0000028 3300046694 Bacteria 163229
219 Ga0495649_0028354 3300046694 Bacteria 3103
220 Ga0495649_0073883 3300046694 Bacteria 1826
221 Ga0495589_0002249 3300046794 Bacteria 10841
222 Ga0495589_0025554 3300046794 Bacteria 2997
223 Ga0495600_0006948 3300046809 Bacteria 6906
224 Ga0495600_0027297 3300046809 Bacteria 3689
225 Ga0495660_0036754 3300046810 Bacteria 2730
226 Ga0495660_0087249 3300046810 Bacteria 1627
227 Ga0495581_0003598 3300047315 Bacteria 8916
228 Ga0495604_0083039 3300047317 Bacteria 2395
229 Ga0495604_0240376 3300047317 Bacteria 1238
230 Ga0495674_0090185 3300047319 Bacteria 2620
231 Ga0495672_0000055 3300047320 Bacteria 229428
232 Ga0495672_0000334 3300047320 Bacteria 61678
233 Ga0495680_0036120 3300047322 Bacteria 3971
234 Ga0495683_0000047 3300047323 Bacteria 126770
235 Ga0495683_0001260 3300047323 Bacteria 17172
236 Ga0495683_0009315 3300047323 Bacteria 5232
237 Ga0495683_0012991 3300047323 Bacteria 4362
238 Ga0495683_0024320 3300047323 Bacteria 3109
239 Ga0495687_004646 3300047443 Bacteria 9166
240 Ga0495687_006053 3300047443 Bacteria 7535
241 Ga0495675_0003845 3300047444 Bacteria 9091
242 Ga0495675_0085336 3300047444 Bacteria 1985
243 Ga0495675_0100311 3300047444 Bacteria 1812
244 Ga0495675_0105363 3300047444 Bacteria 1762
245 Ga0495677_0024061 3300047445 Bacteria 2209
246 Ga0495679_021354 3300047446 Bacteria 2237
247 Ga0495681_0006008 3300047470 Bacteria 8041
248 Ga0495681_0014315 3300047470 Bacteria 4552
249 Ga0495681_0050122 3300047470 Bacteria 1969
250 Ga0495684_0005498 3300047471 Bacteria 9863
251 Ga0495684_0080010 3300047471 Bacteria 2481
252 Ga0495686_0067641 3300047472 Bacteria 2205
253 Ga0495602_0023541 3300048088 Bacteria 5998
254 Ga0495614_0012132 3300048089 Bacteria 3784
255 Ga0495615_0006641 3300048090 Bacteria 2156
256 Ga0495626_0007108 3300048091 Bacteria 6269
257 Ga0495626_0010035 3300048091 Bacteria 5080
258 Ga0495626_0022935 3300048091 Bacteria 3079
259 Ga0495626_0028562 3300048091 Bacteria 2703
260 Ga0496101_0276128 3300048904 Bacteria 1313
261 Ga0496102_0016624 3300048905 Bacteria 6432
262 Ga0496103_0013140 3300048906 Bacteria 4910
263 Ga0496104_0049145 3300048907 Bacteria 3977
264 Ga0496105_0000572 3300048908 Bacteria 24357
265 Ga0496106_0070747 3300048909 Bacteria 2665
266 Ga0496109_0005079 3300048912 Bacteria 10995
267 Ga0496112_0454550 3300048915 Bacteria 1218
268 Ga0496113_0035251 3300048916 Bacteria 3658
269 Ga0496115_0041449 3300048918 Bacteria 3665
270 Ga0496116_0029951 3300048919 Bacteria 3917
271 Ga0496118_0004640 3300048921 Bacteria 16123
272 Ga0496118_0078902 3300048921 Bacteria 2326
273 Ga0496119_0000213 3300048922 Bacteria 82822
274 Ga0496121_0000089 3300048924 Bacteria 219007
275 Ga0496122_0000310 3300048925 Bacteria 107506
276 Ga0496123_0000312 3300048926 Bacteria 93478
277 Ga0496124_0006404 3300048927 Bacteria 12836
278 Ga0496124_0051408 3300048927 Bacteria 3507
279 Ga0496125_0002445 3300048928 Bacteria 24130
280 Ga0496125_0017213 3300048928 Bacteria 6908
281 Ga0496126_0003551 3300048929 Bacteria 19610
282 Ga0495678_000025 3300049459 Bacteria 227891
283 Ga0495678_000060 3300049459 Bacteria 142851
284 Ga0495678_000266 3300049459 Bacteria 57869
285 Ga0495678_000478 3300049459 Bacteria 39768
286 Ga0495678_003319 3300049459 Bacteria 10030
287 Ga0495682_0000035 3300049460 Bacteria 126349
288 Ga0501033_0048536 3300049570 Bacteria 3153
289 Ga0501039_0155236 3300049575 Bacteria 1798
290 Ga0501047_0068763 3300049581 Bacteria 3411
291 Ga0501035_0004764 3300049822 Bacteria 12883
292 Ga0501044_0008745 3300049823 Bacteria 11079
293 nmdc:mga06z11_126750_c1 3300050494 Bacteria 1429
294 Ga0495601_0093835 3300053077 Bacteria 1933
295 Ga0495595_0058539 3300053084 Bacteria 1799
296 Ga0500619_000140 3300053154 Bacteria 17787

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046531 Ga0495665_0015163 Ga0495665_0015163_20_970 305
2 3300026121 Ga0207683_10263894 Ga0207683_102638942 314
3 3300044694 Ga0466963_0206981 Ga0466963_0206981_13_1002 321
4 3300037068 Ga0373925_0056541 Ga0373925_0056541_27_1016 322
5 3300046524 Ga0495648_0017897 Ga0495648_0017897_3556_4656 339
6 3300046538 Ga0495609_0000647 Ga0495609_0000647_21320_22432 339
7 3300048927 Ga0496124_0051408 Ga0496124_0051408_1486_2598 339
8 3300048091 Ga0495626_0022935 Ga0495626_0022935_10_1032 340
9 3300046453 Ga0495627_000007 Ga0495627_000007_356923_358035 341
10 3300046557 Ga0495622_0000092 Ga0495622_0000092_8129_9238 341
11 3300046810 Ga0495660_0087249 Ga0495660_0087249_286_1398 341
12 3300047470 Ga0495681_0006008 Ga0495681_0006008_4893_6005 341
13 3300049459 Ga0495678_003319 Ga0495678_003319_8329_9471 341
14 3300031235 Ga0265330_10010969 Ga0265330_100109696 343
15 3300031247 Ga0265340_10056986 Ga0265340_100569862 345
16 3300046457 Ga0495590_0000129 Ga0495590_0000129_39976_41094 346
17 3300006186 Ga0075369_10047020 Ga0075369_100470201 347
18 3300047323 Ga0495683_0012991 Ga0495683_0012991_175_1311 347
19 3300046512 Ga0495610_0032601 Ga0495610_0032601_1332_2405 349
20 3300046542 Ga0495597_0000762 Ga0495597_0000762_3106_4170 349
21 3300053154 Ga0500619_000140 Ga0500619_000140_3318_4382 349
22 3300005334 Ga0068869_100067079 Ga0068869_1000670792 350
23 3300005343 Ga0070687_100131586 Ga0070687_1001315862 350
24 3300005444 Ga0070694_100274530 Ga0070694_1002745302 350
25 3300025918 Ga0207662_10138194 Ga0207662_101381942 350
26 3300025942 Ga0207689_10015226 Ga0207689_100152262 350
27 3300026075 Ga0207708_10209699 Ga0207708_102096992 350
28 3300031507 Ga0307509_10118233 Ga0307509_101182332 351
29 3300046500 Ga0495596_0004602 Ga0495596_0004602_4929_6056 351
30 3300046506 Ga0495583_0035902 Ga0495583_0035902_494_1621 351
31 3300005441 Ga0070700_100181530 Ga0070700_1001815302 352
32 3300005843 Ga0068860_100000101 Ga0068860_10000010170 352
33 3300025929 Ga0207664_10254473 Ga0207664_102544731 352
34 3300026078 Ga0207702_10021218 Ga0207702_100212181 352
35 3300028381 Ga0268264_10000030 Ga0268264_10000030160 352
36 3300048922 Ga0496119_0000213 Ga0496119_0000213_66630_67718 352
37 3300031247 Ga0265340_10026205 Ga0265340_100262052 353
38 3300031249 Ga0265339_10001335 Ga0265339_100013359 353
39 3300046500 Ga0495596_0019695 Ga0495596_0019695_46_1134 353
40 3300046513 Ga0495616_0137246 Ga0495616_0137246_10_1098 353
41 3300049570 Ga0501033_0048536 Ga0501033_0048536_1909_2988 353
42 3300049575 Ga0501039_0155236 Ga0501039_0155236_511_1590 353
43 3300049581 Ga0501047_0068763 Ga0501047_0068763_1718_2797 353
44 3300049822 Ga0501035_0004764 Ga0501035_0004764_11666_12745 353
45 3300049823 Ga0501044_0008745 Ga0501044_0008745_2317_3396 353
46 iso_pu_bacteria 2585428062 2587756652 354
47 3300031456 Ga0307513_10186357 Ga0307513_101863572 355
48 3300046460 Ga0495638_0010290 Ga0495638_0010290_4546_5616 356
49 3300046694 Ga0495649_0073883 Ga0495649_0073883_424_1494 356
50 3300047444 Ga0495675_0085336 Ga0495675_0085336_374_1444 356
51 iso_pu_bacteria 2842711865 2842715391 356
52 3300013105 Ga0157369_10112282 Ga0157369_101122823 357
53 3300014497 Ga0182008_10024550 Ga0182008_100245504 357
54 3300046474 Ga0495605_0044395 Ga0495605_0044395_824_1903 357
55 3300046500 Ga0495596_0008019 Ga0495596_0008019_2451_3530 357
56 3300046512 Ga0495610_0000947 Ga0495610_0000947_2502_3581 357
57 3300046516 Ga0495628_0110865 Ga0495628_0110865_827_1900 357
58 3300046794 Ga0495589_0025554 Ga0495589_0025554_629_1708 357
59 3300047323 Ga0495683_0009315 Ga0495683_0009315_2887_3966 357
60 3300047443 Ga0495687_006053 Ga0495687_006053_5733_6812 357
61 3300048091 Ga0495626_0010035 Ga0495626_0010035_2258_3337 357
62 3300048921 Ga0496118_0078902 Ga0496118_0078902_1206_2285 357
63 3300028794 Ga0307515_10000494 Ga0307515_1000049446 358
64 3300028794 Ga0307515_10006378 Ga0307515_1000637813 358
65 3300028794 Ga0307515_10069247 Ga0307515_100692472 358
66 3300031456 Ga0307513_10015655 Ga0307513_100156554 358
67 3300031616 Ga0307508_10000096 Ga0307508_1000009614 358
68 3300031649 Ga0307514_10059508 Ga0307514_100595082 358
69 3300031730 Ga0307516_10039313 Ga0307516_100393133 358
70 3300033179 Ga0307507_10075739 Ga0307507_100757393 358
71 3300041511 Ga0451855_1673813 Ga0451855_1673813_32_1123 358
72 3300046460 Ga0495638_0065519 Ga0495638_0065519_837_1943 358
73 3300046506 Ga0495583_0004680 Ga0495583_0004680_398_1507 358
74 3300046512 Ga0495610_0012368 Ga0495610_0012368_1010_2170 358
75 3300046512 Ga0495610_0074468 Ga0495610_0074468_150_1241 358
76 3300046513 Ga0495616_0001459 Ga0495616_0001459_556_1665 358
77 3300046522 Ga0495643_0000028 Ga0495643_0000028_260404_261510 358
78 3300046522 Ga0495643_0001116 Ga0495643_0001116_620_1729 358
79 3300046522 Ga0495643_0020548 Ga0495643_0020548_690_1781 358
80 3300046558 Ga0495633_0004718 Ga0495633_0004718_1627_2787 358
81 3300046616 Ga0495668_0000018 Ga0495668_0000018_168212_169291 358
82 3300046665 Ga0495661_0019260 Ga0495661_0019260_2917_4026 358
83 3300047320 Ga0495672_0000334 Ga0495672_0000334_14585_15691 358
84 3300047472 Ga0495686_0067641 Ga0495686_0067641_1054_2145 358
85 3300048091 Ga0495626_0007108 Ga0495626_0007108_1148_2257 358
86 3300048919 Ga0496116_0029951 Ga0496116_0029951_2055_3218 358
87 3300049459 Ga0495678_000478 Ga0495678_000478_641_1747 358
88 iso_pu_bacteria 2857553236 2857554545 358
89 iso_pu_bacteria 2904504865 2904508956 358
90 3300003773 Ga0055537_1000060 Ga0055537_10000603 359
91 3300003784 Ga0055534_1000009 Ga0055534_100000942 359
92 3300003790 Ga0055528_1000012 Ga0055528_1000012137 359
93 3300025263 Ga0209565_1000015 Ga0209565_1000015318 359
94 3300025273 Ga0209673_1000017 Ga0209673_1000017209 359
95 3300025291 Ga0209675_1000012 Ga0209675_1000012164 359
96 3300025295 Ga0209564_1000016 Ga0209564_1000016277 359
97 3300025299 Ga0209256_1000314 Ga0209256_100031439 359
98 3300005334 Ga0068869_100221038 Ga0068869_1002210382 360
99 3300030744 Ga0316181_1129545 Ga0316181_11295451 360
100 3300046506 Ga0495583_0000011 Ga0495583_0000011_174478_175605 360
101 3300046558 Ga0495633_0000181 Ga0495633_0000181_49769_50929 360
102 3300046660 Ga0495625_0062259 Ga0495625_0062259_592_1731 360
103 3300006038 Ga0075365_10086273 Ga0075365_100862732 361
104 3300009101 Ga0105247_10038533 Ga0105247_100385332 361
105 3300010375 Ga0105239_10213099 Ga0105239_102130992 361
106 3300025906 Ga0207699_10123363 Ga0207699_101233631 361
107 3300025908 Ga0207643_10085049 Ga0207643_100850492 361
108 3300025914 Ga0207671_10021491 Ga0207671_100214914 361
109 3300031235 Ga0265330_10078938 Ga0265330_100789382 361
110 3300031238 Ga0265332_10028981 Ga0265332_100289812 361
111 3300031241 Ga0265325_10002402 Ga0265325_100024029 361
112 3300031507 Ga0307509_10134844 Ga0307509_101348442 361
113 3300031595 Ga0265313_10047311 Ga0265313_100473112 361
114 3300031712 Ga0265342_10023680 Ga0265342_100236802 361
115 3300033179 Ga0307507_10013349 Ga0307507_100133492 361
116 3300035086 Ga0373934_0028483 Ga0373934_0028483_817_1926 361
117 3300035111 Ga0373923_0008265 Ga0373923_0008265_25_1134 361
118 3300035113 Ga0373936_0082049 Ga0373936_0082049_145_1254 361
119 3300035117 Ga0373953_0000542 Ga0373953_0000542_7909_9018 361
120 3300035118 Ga0373954_0000323 Ga0373954_0000323_10122_11231 361
121 3300035119 Ga0373956_0009107 Ga0373956_0009107_132_1241 361
122 3300035120 Ga0373957_0053966 Ga0373957_0053966_269_1378 361
123 3300035172 Ga0373955_0003057 Ga0373955_0003057_5862_6971 361
124 3300035695 Ga0373927_0026860 Ga0373927_0026860_1722_2828 361
125 3300035724 Ga0373933_0001324 Ga0373933_0001324_13308_14417 361
126 3300036401 Ga0373937_0007329 Ga0373937_0007329_6928_8037 361
127 3300039447 Ga0436361_0080901 Ga0436361_0080901_1525_2631 361
128 3300046454 Ga0495592_0100630 Ga0495592_0100630_328_1437 361
129 3300046459 Ga0495629_0018501 Ga0495629_0018501_526_1635 361
130 3300046462 Ga0495651_0014174 Ga0495651_0014174_2776_3885 361
131 3300046463 Ga0495653_0051904 Ga0495653_0051904_1513_2622 361
132 3300046511 Ga0495608_0012098 Ga0495608_0012098_2613_3722 361
133 3300046516 Ga0495628_0124628 Ga0495628_0124628_408_1517 361
134 3300046536 Ga0495587_0005573 Ga0495587_0005573_4495_5604 361
135 3300046543 Ga0495645_0114611 Ga0495645_0114611_511_1620 361
136 3300046642 Ga0495634_0013304 Ga0495634_0013304_4540_5649 361
137 3300046663 Ga0495635_0006348 Ga0495635_0006348_6577_7686 361
138 3300046678 Ga0495599_0004863 Ga0495599_0004863_437_1546 361
139 3300046679 Ga0495623_0005974 Ga0495623_0005974_1173_2282 361
140 3300046680 Ga0495646_0008308 Ga0495646_0008308_3017_4126 361
141 3300047319 Ga0495674_0090185 Ga0495674_0090185_340_1449 361
142 3300047322 Ga0495680_0036120 Ga0495680_0036120_2405_3514 361
143 3300047444 Ga0495675_0003845 Ga0495675_0003845_7525_8634 361
144 3300047471 Ga0495684_0005498 Ga0495684_0005498_5491_6600 361
145 3300048088 Ga0495602_0023541 Ga0495602_0023541_2277_3386 361
146 3300048904 Ga0496101_0276128 Ga0496101_0276128_48_1154 361
147 3300048909 Ga0496106_0070747 Ga0496106_0070747_1145_2251 361
148 3300048918 Ga0496115_0041449 Ga0496115_0041449_2512_3621 361
149 3300048921 Ga0496118_0004640 Ga0496118_0004640_5020_6126 361
150 3300048924 Ga0496121_0000089 Ga0496121_0000089_72703_73809 361
151 3300048927 Ga0496124_0006404 Ga0496124_0006404_682_1788 361
152 3300048928 Ga0496125_0017213 Ga0496125_0017213_464_1570 361
153 3300048929 Ga0496126_0003551 Ga0496126_0003551_3915_5021 361
154 3300050494 nmdc:mga06z11_126750_c1 nmdc:mga06z11_126750_c1_152_1258 361
155 3300053077 Ga0495601_0093835 Ga0495601_0093835_375_1484 361
156 3300053084 Ga0495595_0058539 Ga0495595_0058539_292_1401 361
157 iso_pu_bacteria 2513237087 2513592067 361
158 3300013308 Ga0157375_10246616 Ga0157375_102466162 362
159 3300031507 Ga0307509_10021794 Ga0307509_100217943 362
160 3300046474 Ga0495605_0005848 Ga0495605_0005848_1350_2438 362
161 3300046616 Ga0495668_0094643 Ga0495668_0094643_67_1155 362
162 3300048907 Ga0496104_0049145 Ga0496104_0049145_1202_2329 362
163 3300048908 Ga0496105_0000572 Ga0496105_0000572_5141_6268 362
164 3300013105 Ga0157369_10085121 Ga0157369_100851212 363
165 3300048905 Ga0496102_0016624 Ga0496102_0016624_4687_5811 363
166 3300048906 Ga0496103_0013140 Ga0496103_0013140_2019_3143 363
167 3300005262 Ga0065165_1001101 Ga0065165_100110125 364
168 3300021361 Ga0213872_10007605 Ga0213872_100076052 364
169 3300039447 Ga0436361_0761768 Ga0436361_0761768_3604_4737 364
170 3300044842 Ga0466957_0111331 Ga0466957_0111331_352_1458 364
171 3300046452 Ga0495617_036482 Ga0495617_036482_293_1435 364
172 3300046457 Ga0495590_0000008 Ga0495590_0000008_29297_30439 364
173 3300046458 Ga0495591_000043 Ga0495591_000043_99141_100283 364
174 3300046491 Ga0495584_0000025 Ga0495584_0000025_30534_31676 364
175 3300046492 Ga0495585_0018187 Ga0495585_0018187_2381_3511 364
176 3300046492 Ga0495585_0057090 Ga0495585_0057090_238_1365 364
177 3300046499 Ga0495594_0103617 Ga0495594_0103617_310_1437 364
178 3300046500 Ga0495596_0028698 Ga0495596_0028698_255_1385 364
179 3300046501 Ga0495607_0056610 Ga0495607_0056610_686_1828 364
180 3300046506 Ga0495583_0000512 Ga0495583_0000512_24441_25583 364
181 3300046506 Ga0495583_0021509 Ga0495583_0021509_849_1979 364
182 3300046507 Ga0495606_0076342 Ga0495606_0076342_511_1641 364
183 3300046507 Ga0495606_0114502 Ga0495606_0114502_184_1314 364
184 3300046512 Ga0495610_0002865 Ga0495610_0002865_6577_7719 364
185 3300046513 Ga0495616_0000107 Ga0495616_0000107_50753_51880 364
186 3300046513 Ga0495616_0000150 Ga0495616_0000150_733_1863 364
187 3300046513 Ga0495616_0020120 Ga0495616_0020120_2159_3265 364
188 3300046518 Ga0495631_0000337 Ga0495631_0000337_4855_5985 364
189 3300046518 Ga0495631_0018991 Ga0495631_0018991_1636_2763 364
190 3300046519 Ga0495632_0000109 Ga0495632_0000109_83611_84738 364
191 3300046519 Ga0495632_0000115 Ga0495632_0000115_573_1703 364
192 3300046519 Ga0495632_0028756 Ga0495632_0028756_469_1611 364
193 3300046520 Ga0495637_0000009 Ga0495637_0000009_309891_311033 364
194 3300046522 Ga0495643_0003017 Ga0495643_0003017_8732_9862 364
195 3300046522 Ga0495643_0027465 Ga0495643_0027465_1663_2805 364
196 3300046523 Ga0495644_0027030 Ga0495644_0027030_17_1159 364
197 3300046528 Ga0495642_0000611 Ga0495642_0000611_16344_17471 364
198 3300046530 Ga0495654_0005383 Ga0495654_0005383_17_1144 364
199 3300046539 Ga0495621_0011400 Ga0495621_0011400_15_1328 364
200 3300046558 Ga0495633_0000925 Ga0495633_0000925_254_1396 364
201 3300046616 Ga0495668_0004203 Ga0495668_0004203_461_1591 364
202 3300046648 Ga0495611_0061503 Ga0495611_0061503_63_1289 364
203 3300046660 Ga0495625_0147795 Ga0495625_0147795_149_1279 364
204 3300046665 Ga0495661_0021365 Ga0495661_0021365_98_1204 364
205 3300046665 Ga0495661_0102290 Ga0495661_0102290_46_1188 364
206 3300046665 Ga0495661_0123968 Ga0495661_0123968_207_1349 364
207 3300046684 Ga0495669_0000304 Ga0495669_0000304_9113_10240 364
208 3300046691 Ga0495670_0005476 Ga0495670_0005476_4454_5581 364
209 3300046694 Ga0495649_0000028 Ga0495649_0000028_111350_112492 364
210 3300046694 Ga0495649_0028354 Ga0495649_0028354_374_1504 364
211 3300046794 Ga0495589_0002249 Ga0495589_0002249_9189_10319 364
212 3300046810 Ga0495660_0036754 Ga0495660_0036754_221_1351 364
213 3300047320 Ga0495672_0000055 Ga0495672_0000055_99093_100235 364
214 3300047323 Ga0495683_0000047 Ga0495683_0000047_94008_95150 364
215 3300047445 Ga0495677_0024061 Ga0495677_0024061_284_1426 364
216 3300047446 Ga0495679_021354 Ga0495679_021354_678_1808 364
217 3300047470 Ga0495681_0014315 Ga0495681_0014315_3095_4225 364
218 3300047470 Ga0495681_0050122 Ga0495681_0050122_628_1770 364
219 3300048090 Ga0495615_0006641 Ga0495615_0006641_485_1798 364
220 3300048091 Ga0495626_0028562 Ga0495626_0028562_1086_2216 364
221 3300049459 Ga0495678_000025 Ga0495678_000025_99980_101122 364
222 3300049459 Ga0495678_000060 Ga0495678_000060_111433_112563 364
223 3300049459 Ga0495678_000266 Ga0495678_000266_37062_38192 364
224 3300049460 Ga0495682_0000035 Ga0495682_0000035_65226_66356 364
225 iso_pu_bacteria 2508501125 2509130505 364
226 iso_pu_bacteria 2513237151 2513958553 364
227 iso_pu_bacteria 2738541296 2738822610 364
228 iso_pu_bacteria 2738541298 2738834817 364
229 iso_pu_bacteria 2738541306 2738876296 364
230 iso_pu_bacteria 2738543002 2739188240 364
231 iso_pu_bacteria 2738543008 2739222893 364
232 iso_pu_bacteria 2765235838 2765570805 364
233 iso_pu_bacteria 2839094727 2839099489 364
234 iso_pu_bacteria 2904483920 2904486625 364
235 iso_pu_bacteria 2919527303 2919527956 364
236 iso_pu_bacteria 2945934425 2945940090 364
237 iso_pu_bacteria 2990703756 2990707213 364
238 iso_pu_bacteria 641736151 642424168 364
239 iso_pu_bacteria 8055266321 8055269221 364
240 iso_pu_bacteria 8055301274 8055304634 364
241 3300009176 Ga0105242_10339695 Ga0105242_103396952 365
242 3300021361 Ga0213872_10052789 Ga0213872_100527891 365
243 3300044684 Ga0466966_0029942 Ga0466966_0029942_1062_2165 365
244 3300044693 Ga0466961_0009705 Ga0466961_0009705_1670_2773 365
245 3300044706 Ga0466964_0001512 Ga0466964_0001512_475_1578 365
246 3300044719 Ga0466971_0001325 Ga0466971_0001325_5524_6627 365
247 3300044765 Ga0466970_0010401 Ga0466970_0010401_2432_3535 365
248 3300045049 Ga0466959_0006379 Ga0466959_0006379_2055_3158 365
249 3300046463 Ga0495653_0002557 Ga0495653_0002557_12972_14114 365
250 3300046463 Ga0495653_0012104 Ga0495653_0012104_3505_4650 365
251 3300046471 Ga0495650_0004658 Ga0495650_0004658_7198_8331 365
252 3300046473 Ga0495582_0078125 Ga0495582_0078125_557_1699 365
253 3300046475 Ga0495639_0046250 Ga0495639_0046250_593_1735 365
254 3300046499 Ga0495594_0019236 Ga0495594_0019236_1510_2652 365
255 3300046517 Ga0495630_0020232 Ga0495630_0020232_3458_4600 365
256 3300046526 Ga0495666_0003121 Ga0495666_0003121_6843_7985 365
257 3300046529 Ga0495652_0101223 Ga0495652_0101223_506_1648 365
258 3300046536 Ga0495587_0015245 Ga0495587_0015245_3239_4381 365
259 3300046536 Ga0495587_0041831 Ga0495587_0041831_1420_2565 365
260 3300046642 Ga0495634_0018282 Ga0495634_0018282_658_1800 365
261 3300046665 Ga0495661_0000292 Ga0495661_0000292_33362_34507 365
262 3300046674 Ga0495588_0077721 Ga0495588_0077721_306_1448 365
263 3300046809 Ga0495600_0006948 Ga0495600_0006948_324_1466 365
264 3300047317 Ga0495604_0083039 Ga0495604_0083039_201_1343 365
265 3300047444 Ga0495675_0105363 Ga0495675_0105363_108_1250 365
266 3300048912 Ga0496109_0005079 Ga0496109_0005079_492_1637 365
267 3300048915 Ga0496112_0454550 Ga0496112_0454550_33_1178 365
268 3300048916 Ga0496113_0035251 Ga0496113_0035251_367_1512 365
269 3300048925 Ga0496122_0000310 Ga0496122_0000310_54560_55705 365
270 3300048926 Ga0496123_0000312 Ga0496123_0000312_37931_39076 365
271 3300048928 Ga0496125_0002445 Ga0496125_0002445_249_1394 365
272 iso_pu_bacteria 2808606418 2809146996 365
273 iso_pu_bacteria 2856287931 2856288403 366
274 iso_pu_bacteria 2857357740 2857367168 366
275 3300002705 JGI25156J39149_1001371 JGI25156J39149_10013716 368
276 3300003214 JGI25165J46597_1000486 JGI25165J46597_100048611 368
277 3300003756 Ga0055533_1000069 Ga0055533_1000069106 368
278 3300003758 Ga0055532_1000011 Ga0055532_100001144 368
279 3300003760 Ga0055527_1000009 Ga0055527_100000944 368
280 3300003761 Ga0055535_1000008 Ga0055535_1000008325 368
281 3300003762 Ga0055542_1000014 Ga0055542_1000014325 368
282 3300003763 Ga0055529_1000010 Ga0055529_1000010325 368
283 3300025226 Ga0209674_100011 Ga0209674_100011866 368
284 3300025228 Ga0209672_100002 Ga0209672_100002863 368
285 3300025229 Ga0209147_100003 Ga0209147_100003863 368
286 3300025230 Ga0209563_100359 Ga0209563_1003597 368
287 3300025231 Ga0207427_100366 Ga0207427_1003664 368
288 3300025242 Ga0209258_100005 Ga0209258_100005504 368
289 3300025254 Ga0209148_1000006 Ga0209148_1000006863 368
290 3300025256 Ga0209759_1000006 Ga0209759_1000006139 368
291 3300025261 Ga0209233_1000018 Ga0209233_1000018486 368
292 3300025272 Ga0209455_1000003 Ga0209455_1000003863 368
293 3300025904 Ga0207647_10058044 Ga0207647_100580444 368
294 3300025909 Ga0207705_10222245 Ga0207705_102222452 368
295 3300027312 Ga0209371_1014485 Ga0209371_10144853 368
296 3300031911 Ga0307412_10000082 Ga0307412_1000008255 368
297 3300046457 Ga0495590_0046032 Ga0495590_0046032_396_1502 368
298 3300046459 Ga0495629_0007954 Ga0495629_0007954_5029_6135 368
299 3300046471 Ga0495650_0013175 Ga0495650_0013175_137_1243 368
300 3300046473 Ga0495582_0006013 Ga0495582_0006013_5094_6200 368
301 3300046507 Ga0495606_0004752 Ga0495606_0004752_10042_11148 368
302 3300046511 Ga0495608_0032622 Ga0495608_0032622_1526_2632 368
303 3300046514 Ga0495618_0014381 Ga0495618_0014381_2763_3869 368
304 3300046529 Ga0495652_0082676 Ga0495652_0082676_731_1837 368
305 3300046533 Ga0495640_0056229 Ga0495640_0056229_668_1774 368
306 3300046642 Ga0495634_0011966 Ga0495634_0011966_4758_5864 368
307 3300046663 Ga0495635_0009795 Ga0495635_0009795_769_1875 368
308 3300046675 Ga0495657_0100215 Ga0495657_0100215_616_1722 368
309 3300046678 Ga0495599_0054892 Ga0495599_0054892_103_1209 368
310 3300046679 Ga0495623_0019869 Ga0495623_0019869_1819_2925 368
311 3300046680 Ga0495646_0035121 Ga0495646_0035121_652_1758 368
312 3300046809 Ga0495600_0027297 Ga0495600_0027297_2428_3534 368
313 3300047315 Ga0495581_0003598 Ga0495581_0003598_3011_4117 368
314 3300047317 Ga0495604_0240376 Ga0495604_0240376_13_1119 368
315 3300047323 Ga0495683_0001260 Ga0495683_0001260_9250_10356 368
316 3300047323 Ga0495683_0024320 Ga0495683_0024320_1716_2822 368
317 3300047443 Ga0495687_004646 Ga0495687_004646_6525_7631 368
318 3300047444 Ga0495675_0100311 Ga0495675_0100311_305_1411 368
319 3300047471 Ga0495684_0080010 Ga0495684_0080010_450_1556 368
320 3300048089 Ga0495614_0012132 Ga0495614_0012132_2040_3146 368

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04303

PrpF

PrpF protein

42

401

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6otv-assembly1.cif.gz_A crystal structure of putative isomerase ec2056 0.8828 8 360
6otv-assembly1.cif.gz_A crystal structure of putative isomerase ec2056 0.8758 8 360
3g7k-assembly3.cif.gz_C crystal structure of methylitaconate-delta-isomerase 0.8741 5 363
3g7k-assembly3.cif.gz_C crystal structure of methylitaconate-delta-isomerase 0.8593 5 363
6p3j-assembly1.cif.gz_B crystal structure of ligu 0.8461 2 360
ID Description Score Start End Superfamily
af_P0AAV8_1_178_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9491 7 173 3.10.310.10
3g7kB01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9417 5 173 3.10.310.10
af_P0AAV8_179_330_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9291 184 335 3.10.310.10
2pvzA01 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.919 6 170 3.10.310.10
af_P0AAV8_179_330_3.10.310.10 Alpha Beta;Roll;Diaminopimelate Epimerase; Chain A, domain 1;Diaminopimelate Epimerase; Chain A, domain 1 0.9115 184 335 3.10.310.10
ID Description Score Start End GO Terms
AF-K9NK90-F1-model_v4 deleted 0.996 201 275
AF-A0A377XGZ1-F1-model_v4 FldA protein 0.9947 187 291 GO:0016853
AF-A0A441XJS6-F1-model_v4 4-oxalomesaconate tautomerase 0.9836 179 254 GO:0016853
AF-A0A2M8Q6N3-F1-model_v4 4-oxalomesaconate tautomerase 0.9777 181 299 GO:0016853
AF-A0A3S4JUN3-F1-model_v4 PrpF protein 0.9726 186 283 GO:0016853

Feature Viewer

pLDDT pTM Quality
87.82 0.83 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map