F405586

General Info

Members Datasets Scaffolds Average Seq Length
320 213 307 254

Family's Representative Sequence

Representative Sequence 3300028800|Ga0265338_10256854|Ga0265338_102568542
Length 280
Sequence MAWTRRYTEAEPQRVNRWLAQNGVCSRREAEDLISRGLVSIDGELVRDLGRKIAANQTLVLADPSDGRSQASLSVMLNKPVGVVSAQPEKGQVPAVRLLTAEALVGQSLTIPGRDARLAPLGRLDMDSRGLLILSEDGVLAKAVIGPASELDKEYMVRVTGAVTEARLAKLRHGLSLDGRRLKPAKVSLVGEQRLRFILKEGRNRQIRRMCELVDLAVADLLRTRIGPLRLGDLPEGRWRALTADERDALVNASAGEGGPGAQRGTLKPPDRANRARTRP

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
3 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
4 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
5 2643221583 Caulobacter sp. Root655 Isolate Unclassified
6 2643221584 Caulobacter sp. Root656 Isolate Unclassified
7 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
8 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
9 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
10 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
11 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
12 2818991435 Caulobacter henricii 536 Isolate Unclassified
13 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
14 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
18 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
19 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
20 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
21 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
22 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
23 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
24 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
25 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
35 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
38 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
39 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
40 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
41 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
42 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
43 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
44 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
45 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
63 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
64 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
65 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
66 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
67 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
68 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
69 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
70 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
107 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
108 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
109 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
110 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
111 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
114 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
115 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
116 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
117 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
118 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
120 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
123 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
124 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
125 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
126 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
127 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
128 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
129 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
130 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
131 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
132 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
133 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
134 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
135 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
136 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
137 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
138 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
139 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
140 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
141 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
142 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
143 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
144 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
145 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
146 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
147 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
148 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
149 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
150 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
151 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
152 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
153 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
154 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
155 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
156 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
157 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
158 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
159 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
160 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
161 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
167 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
170 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
171 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
172 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
173 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
179 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
180 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
181 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
182 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
183 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
184 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
185 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
187 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
188 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
189 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
190 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
191 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
192 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
193 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
194 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
195 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
196 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
197 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
198 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
199 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
200 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
201 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
202 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
203 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
204 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
205 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
206 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
207 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
208 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
209 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
210 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
211 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
212 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
213 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.94
Metatranscriptomes 0
Isolates 4.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.06
Nodule 0
Rhizoplane 9.06
Rhizosphere 65.62
Stem 0
Stem Tuber 0
Unclassified 11.25

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10081331 3300003316 Bacteria 1667
2 rootL2_10106415 3300003322 Bacteria 5329
3 rootH1_10141047 3300003323 Bacteria 2683
4 Ga0055537_1007217 3300003773 Bacteria 2709
5 Ga0055524_1018557 3300003775 Bacteria 2410
6 Ga0055528_1010921 3300003790 Bacteria 3648
7 Ga0070670_100000007 3300005331 Bacteria 318672
8 Ga0070670_100073570 3300005331 Bacteria 2935
9 Ga0068869_100081231 3300005334 Bacteria 2420
10 Ga0070691_10064495 3300005341 Bacteria 1767
11 Ga0070668_100007108 3300005347 Bacteria 8295
12 Ga0070668_100015922 3300005347 Bacteria 5626
13 Ga0070671_100206029 3300005355 Bacteria 1668
14 Ga0070671_100590154 3300005355 Unclassified 960
15 Ga0070673_100316283 3300005364 Bacteria 1378
16 Ga0070659_100001070 3300005366 Bacteria 20035
17 Ga0070659_100019505 3300005366 Bacteria 5140
18 Ga0070659_100346395 3300005366 Bacteria 1246
19 Ga0070667_100000560 3300005367 Bacteria 36828
20 Ga0070667_100001821 3300005367 Bacteria 19005
21 Ga0070713_100478874 3300005436 Bacteria 1172
22 Ga0070663_100320844 3300005455 Bacteria 1245
23 Ga0070681_10042995 3300005458 Bacteria 4527
24 Ga0070681_10049021 3300005458 Bacteria 4218
25 Ga0068853_100158940 3300005539 Bacteria 2038
26 Ga0068853_100163786 3300005539 Bacteria 2008
27 Ga0070665_100000505 3300005548 Bacteria 55944
28 Ga0070665_100002342 3300005548 Bacteria 20993
29 Ga0070665_100004010 3300005548 Bacteria 15526
30 Ga0068855_100011305 3300005563 Bacteria 10779
31 Ga0068857_100249700 3300005577 Bacteria 1626
32 Ga0068856_100178177 3300005614 Bacteria 2138
33 Ga0068852_100773775 3300005616 Bacteria 973
34 Ga0068864_100000093 3300005618 Bacteria 93540
35 Ga0068864_100000095 3300005618 Bacteria 91554
36 Ga0068864_100005595 3300005618 Bacteria 10301
37 Ga0068863_100000045 3300005841 Bacteria 147269
38 Ga0068863_100004340 3300005841 Bacteria 13971
39 Ga0068863_100026574 3300005841 Bacteria 5520
40 Ga0068858_100000144 3300005842 Bacteria 75375
41 Ga0068858_100062375 3300005842 Bacteria 3446
42 Ga0068860_100000204 3300005843 Bacteria 93995
43 Ga0068860_100000517 3300005843 Bacteria 47364
44 Ga0068862_100001773 3300005844 Bacteria 19517
45 Ga0068862_100043901 3300005844 Bacteria 3811
46 Ga0070717_10167774 3300006028 Bacteria 1908
47 Ga0070715_10004289 3300006163 Bacteria 4656
48 Ga0075366_10107548 3300006195 Bacteria 1677
49 Ga0097621_100343991 3300006237 Bacteria 1325
50 Ga0068865_100001450 3300006881 Bacteria 13803
51 Ga0105240_10001441 3300009093 Bacteria 40617
52 Ga0105240_10001973 3300009093 Bacteria 33910
53 Ga0105240_10015918 3300009093 Bacteria 10202
54 Ga0105240_10115251 3300009093 Bacteria 3245
55 Ga0105240_10123889 3300009093 Bacteria 3109
56 Ga0105240_10205545 3300009093 Bacteria 2305
57 Ga0105240_10239649 3300009093 Bacteria 2103
58 Ga0105245_10181605 3300009098 Bacteria 2011
59 Ga0105242_10326611 3300009176 Bacteria 1409
60 Ga0105242_10362706 3300009176 Bacteria 1341
61 Ga0105248_10000957 3300009177 Bacteria 32168
62 Ga0105248_10001756 3300009177 Bacteria 24138
63 Ga0105248_10008322 3300009177 Bacteria 11397
64 Ga0105248_10120009 3300009177 Bacteria 2966
65 Ga0105248_10141114 3300009177 Bacteria 2718
66 Ga0105248_10153355 3300009177 Bacteria 2599
67 Ga0105248_10859424 3300009177 Bacteria 1024
68 Ga0105237_10628469 3300009545 Bacteria 1081
69 Ga0105249_10006260 3300009553 Bacteria 10337
70 Ga0105239_10438031 3300010375 Bacteria 1482
71 Ga0157370_10277731 3300013104 Bacteria 1548
72 Ga0157369_10607839 3300013105 Bacteria 1128
73 Ga0163162_10047044 3300013306 Bacteria 4324
74 Ga0157375_10041637 3300013308 Bacteria 4437
75 Ga0163163_10136296 3300014325 Bacteria 2496
76 Ga0163163_10787724 3300014325 Bacteria 1014
77 Ga0157379_10003498 3300014968 Bacteria 13311
78 Ga0157379_10480158 3300014968 Bacteria 1150
79 Ga0183365_10006 3300015684 Bacteria 225936
80 Ga0213876_10022509 3300021384 Bacteria 3331
81 Ga0213876_10029381 3300021384 Bacteria 2897
82 Ga0209565_1000666 3300025263 Bacteria 21849
83 Ga0209673_1003086 3300025273 Bacteria 10221
84 Ga0209675_1007246 3300025291 Bacteria 4293
85 Ga0209564_1004028 3300025295 Bacteria 9290
86 Ga0209758_1004460 3300025297 Bacteria 11633
87 Ga0209758_1006763 3300025297 Bacteria 8062
88 Ga0209050_1021083 3300025298 Bacteria 2393
89 Ga0209256_1002778 3300025299 Bacteria 13466
90 Ga0209256_1013611 3300025299 Bacteria 3005
91 Ga0209257_1000538 3300025304 Bacteria 65300
92 Ga0207685_10005731 3300025905 Bacteria 3311
93 Ga0207705_10088893 3300025909 Bacteria 2260
94 Ga0207707_10200885 3300025912 Bacteria 1738
95 Ga0207695_10009941 3300025913 Bacteria 11693
96 Ga0207695_10017816 3300025913 Bacteria 8239
97 Ga0207695_10025766 3300025913 Bacteria 6575
98 Ga0207695_10035322 3300025913 Bacteria 5423
99 Ga0207695_10088093 3300025913 Bacteria 3125
100 Ga0207660_10180268 3300025917 Bacteria 1640
101 Ga0207657_10006066 3300025919 Bacteria 12570
102 Ga0207657_10013197 3300025919 Bacteria 8111
103 Ga0207657_10179837 3300025919 Bacteria 1710
104 Ga0207652_10022045 3300025921 Bacteria 5264
105 Ga0207694_10169128 3300025924 Bacteria 1769
106 Ga0207650_10000030 3300025925 Bacteria 235824
107 Ga0207650_10055699 3300025925 Bacteria 2936
108 Ga0207687_10035593 3300025927 Bacteria 3387
109 Ga0207644_10288984 3300025931 Bacteria 1318
110 Ga0207690_10000053 3300025932 Bacteria 105125
111 Ga0207686_10087920 3300025934 Bacteria 2045
112 Ga0207704_10059991 3300025938 Bacteria 2351
113 Ga0207711_10000731 3300025941 Bacteria 32250
114 Ga0207711_10001523 3300025941 Bacteria 21545
115 Ga0207711_10060305 3300025941 Bacteria 3269
116 Ga0207711_10064173 3300025941 Bacteria 3172
117 Ga0207711_10341517 3300025941 Bacteria 1386
118 Ga0207689_10060384 3300025942 Bacteria 3118
119 Ga0207679_10263440 3300025945 Bacteria 1471
120 Ga0207667_10150870 3300025949 Bacteria 2392
121 Ga0207651_10292472 3300025960 Bacteria 1351
122 Ga0207712_10002455 3300025961 Bacteria 11960
123 Ga0207668_10000010 3300025972 Bacteria 185249
124 Ga0207668_10000152 3300025972 Bacteria 47686
125 Ga0207640_10409620 3300025981 Bacteria 1106
126 Ga0207658_10000935 3300025986 Bacteria 24111
127 Ga0207658_10001721 3300025986 Bacteria 16535
128 Ga0207658_10013550 3300025986 Bacteria 5574
129 Ga0207703_10000557 3300026035 Bacteria 38274
130 Ga0207703_10007136 3300026035 Bacteria 8889
131 Ga0207639_10104206 3300026041 Bacteria 2300
132 Ga0207702_10222429 3300026078 Bacteria 1759
133 Ga0207641_10000011 3300026088 Bacteria 384362
134 Ga0207641_10011189 3300026088 Bacteria 7360
135 Ga0207641_10440977 3300026088 Bacteria 1257
136 Ga0207676_10000095 3300026095 Bacteria 80405
137 Ga0207676_10000114 3300026095 Bacteria 71881
138 Ga0207674_10264782 3300026116 Bacteria 1666
139 Ga0207675_100329360 3300026118 Bacteria 1492
140 Ga0207683_10097502 3300026121 Bacteria 2622
141 Ga0209981_1009166 3300027378 Bacteria 1351
142 Ga0209999_1002680 3300027543 Bacteria 3149
143 Ga0268266_10000355 3300028379 Bacteria 70950
144 Ga0268266_10001030 3300028379 Bacteria 35113
145 Ga0268266_10007776 3300028379 Bacteria 9612
146 Ga0268265_10005604 3300028380 Bacteria 8575
147 Ga0268265_10070025 3300028380 Bacteria 2726
148 Ga0268265_10087067 3300028380 Bacteria 2484
149 Ga0268264_10000125 3300028381 Bacteria 186416
150 Ga0268264_10000416 3300028381 Bacteria 60203
151 Ga0307517_10003553 3300028786 Bacteria 24213
152 Ga0307517_10185071 3300028786 Bacteria 1335
153 Ga0307515_10125550 3300028794 Bacteria 2870
154 Ga0265338_10006570 3300028800 Bacteria 14757
155 Ga0265338_10023802 3300028800 Bacteria 6281
156 Ga0265338_10256854 3300028800 Bacteria 1286
157 Ga0265340_10013117 3300031247 Bacteria 4362
158 Ga0307513_10002479 3300031456 Bacteria 25548
159 Ga0307513_10010652 3300031456 Bacteria 11501
160 Ga0307513_10059650 3300031456 Bacteria 4049
161 Ga0307513_10382012 3300031456 Bacteria 1148
162 Ga0307508_10047359 3300031616 Bacteria 3835
163 Ga0265314_10059780 3300031711 Bacteria 2605
164 Ga0316576_10024287 3300031727 Bacteria 4231
165 Ga0307516_10000004 3300031730 Bacteria 367451
166 Ga0316577_10020693 3300031733 Bacteria 3645
167 Ga0316583_10000766 3300032133 Bacteria 10072
168 Ga0307510_10030990 3300033180 Bacteria 6051
169 Ga0307510_10266536 3300033180 Bacteria 1191
170 Ga0373936_0003064 3300035113 Bacteria 6252
171 Ga0373931_0030748 3300035691 Bacteria 2767
172 Ga0373927_0009043 3300035695 Bacteria 6686
173 Ga0373925_0000061 3300037068 Bacteria 117783
174 Ga0395899_0014636 3300037312 Bacteria 5987
175 Ga0395900_0000009 3300037418 Bacteria 476249
176 Ga0395900_0040527 3300037418 Bacteria 4800
177 Ga0395900_0165941 3300037418 Bacteria 2250
178 Ga0395898_0012203 3300037466 Bacteria 8886
179 Ga0395898_0030065 3300037466 Bacteria 5439
180 Ga0395905_0000099 3300037471 Bacteria 144776
181 Ga0395905_0000521 3300037471 Bacteria 52722
182 Ga0395901_0000014 3300038443 Bacteria 375100
183 Ga0395901_0106082 3300038443 Bacteria 2949
184 Ga0395901_0141299 3300038443 Bacteria 2530
185 Ga0436365_0425324 3300039437 Bacteria 6293
186 Ga0436365_0587110 3300039437 Bacteria 4201
187 Ga0436360_0494232 3300039438 Bacteria 1849
188 Ga0451853_1790198 3300041512 Bacteria 1324
189 Ga0439435_0074691 3300042436 Bacteria 1009
190 Ga0495627_000525 3300046453 Bacteria 31791
191 Ga0495629_0017022 3300046459 Bacteria 5216
192 Ga0495638_0064759 3300046460 Bacteria 2251
193 Ga0495585_0062536 3300046492 Bacteria 2045
194 Ga0495583_0034922 3300046506 Bacteria 2405
195 Ga0495583_0045273 3300046506 Bacteria 2036
196 Ga0495610_0000056 3300046512 Bacteria 138703
197 Ga0495632_0001177 3300046519 Bacteria 22265
198 Ga0495632_0065706 3300046519 Bacteria 1752
199 Ga0495632_0127575 3300046519 Bacteria 1185
200 Ga0495637_0018669 3300046520 Bacteria 3213
201 Ga0495643_0043372 3300046522 Bacteria 2448
202 Ga0495643_0062263 3300046522 Bacteria 1976
203 Ga0495642_0001550 3300046528 Bacteria 10140
204 Ga0495597_0001492 3300046542 Bacteria 16748
205 Ga0495622_0032856 3300046557 Bacteria 2422
206 Ga0495622_0261101 3300046557 Bacteria 760
207 Ga0495668_0004497 3300046616 Bacteria 9871
208 Ga0495668_0053656 3300046616 Bacteria 2228
209 Ga0495668_0074009 3300046616 Bacteria 1871
210 Ga0495611_0046090 3300046648 Bacteria 1954
211 Ga0495625_0000209 3300046660 Bacteria 93746
212 Ga0495625_0001345 3300046660 Bacteria 30387
213 Ga0495625_0001855 3300046660 Bacteria 24091
214 Ga0495625_0136165 3300046660 Bacteria 1660
215 Ga0495625_0139122 3300046660 Bacteria 1639
216 Ga0495669_0000054 3300046684 Bacteria 78606
217 Ga0495669_0003945 3300046684 Bacteria 6109
218 Ga0495589_0044486 3300046794 Bacteria 2208
219 Ga0495672_0002292 3300047320 Bacteria 17747
220 Ga0495672_0082796 3300047320 Bacteria 1784
221 Ga0495687_024136 3300047443 Bacteria 2895
222 Ga0495677_0031676 3300047445 Bacteria 1925
223 Ga0495673_0000195 3300047469 Bacteria 95428
224 Ga0495681_0108297 3300047470 Bacteria 1206
225 Ga0496100_0075988 3300048903 Bacteria 2254
226 Ga0496101_0049628 3300048904 Bacteria 3020
227 Ga0496101_0103979 3300048904 Bacteria 2129
228 Ga0496101_0527659 3300048904 Bacteria 933
229 Ga0496102_0011643 3300048905 Bacteria 7592
230 Ga0496102_0058311 3300048905 Bacteria 3527
231 Ga0496102_0320224 3300048905 Bacteria 1461
232 Ga0496103_0101539 3300048906 Bacteria 1821
233 Ga0496103_0156406 3300048906 Bacteria 1461
234 Ga0496104_0067455 3300048907 Bacteria 3398
235 Ga0496105_0174961 3300048908 Bacteria 1758
236 Ga0496106_0008765 3300048909 Bacteria 7475
237 Ga0496106_0195361 3300048909 Bacteria 1609
238 Ga0496106_0294461 3300048909 Bacteria 1301
239 Ga0496107_0000675 3300048910 Bacteria 19311
240 Ga0496107_0035517 3300048910 Bacteria 3573
241 Ga0496108_0043311 3300048911 Bacteria 3760
242 Ga0496109_0016694 3300048912 Bacteria 6423
243 Ga0496109_0046982 3300048912 Bacteria 3922
244 Ga0496110_0054000 3300048913 Bacteria 3534
245 Ga0496111_0014045 3300048914 Bacteria 5462
246 Ga0496112_0096168 3300048915 Bacteria 2932
247 Ga0496112_0099654 3300048915 Bacteria 2875
248 Ga0496113_0182778 3300048916 Bacteria 1662
249 Ga0496113_0680491 3300048916 Bacteria 822
250 Ga0496114_0006550 3300048917 Bacteria 9180
251 Ga0496115_0001485 3300048918 Bacteria 16865
252 Ga0496115_0054161 3300048918 Bacteria 3221
253 Ga0496115_0062268 3300048918 Bacteria 3009
254 Ga0496117_0016423 3300048920 Bacteria 6249
255 Ga0496118_0012383 3300048921 Bacteria 8196
256 Ga0496119_0016904 3300048922 Bacteria 5521
257 Ga0496121_0000442 3300048924 Bacteria 81890
258 Ga0496121_0009556 3300048924 Bacteria 11111
259 Ga0496125_0338272 3300048928 Bacteria 904
260 Ga0496126_0223827 3300048929 Bacteria 1579
261 Ga0501034_0257679 3300049571 Bacteria 1688
262 Ga0501034_0322978 3300049571 Bacteria 1476
263 Ga0501043_0035941 3300049579 Bacteria 3897
264 Ga0501047_0003112 3300049581 Bacteria 15739
265 Ga0501067_0067219 3300049583 Bacteria 1984
266 Ga0501070_0209787 3300049586 Bacteria 1599
267 Ga0501072_0001474 3300049588 Bacteria 17632
268 Ga0501073_0003221 3300049589 Bacteria 12248
269 Ga0501074_0010203 3300049590 Bacteria 6818
270 Ga0501080_0180549 3300049742 Bacteria 1942
271 Ga0501083_0002355 3300049744 Bacteria 12943
272 Ga0501035_0059136 3300049822 Bacteria 3413
273 Ga0501035_0277331 3300049822 Bacteria 1418
274 Ga0501044_0260351 3300049823 Bacteria 1673
275 nmdc:mga0k408_40753_c1 3300050493 Bacteria 2673
276 nmdc:mga07m45_47313_c1 3300050496 Bacteria 2418
277 Ga0500635_0000125 3300053080 Bacteria 45357
278 Ga0500643_004111 3300053087 Bacteria 6701
279 Ga0500643_022399 3300053087 Bacteria 2033
280 Ga0500566_0026008 3300053094 Bacteria 3427
281 Ga0500641_0063181 3300053096 Bacteria 1545
282 Ga0500554_001536 3300053102 Bacteria 4457
283 Ga0500555_003254 3300053103 Bacteria 4624
284 Ga0500556_0000307 3300053104 Bacteria 37191
285 Ga0500556_0005213 3300053104 Bacteria 3671
286 Ga0500562_001209 3300053108 Bacteria 6362
287 Ga0500607_161714 3300053121 Bacteria 1022
288 Ga0500608_000131 3300053122 Bacteria 30612
289 Ga0500608_013339 3300053122 Bacteria 3640
290 Ga0500642_0050003 3300053130 Bacteria 1841
291 Ga0500642_0062012 3300053130 Bacteria 1681
292 Ga0500658_0029721 3300053134 Bacteria 2128
293 Ga0500577_0000339 3300053142 Bacteria 12050
294 Ga0500590_151492 3300053148 Bacteria 1045
295 Ga0500603_010721 3300053150 Bacteria 2074
296 Ga0500616_0026698 3300053153 Bacteria 3194
297 Ga0500619_083942 3300053154 Bacteria 1072
298 Ga0500622_0003336 3300053156 Bacteria 10827
299 Ga0500622_0018678 3300053156 Bacteria 3684
300 Ga0500638_009920 3300053162 Bacteria 4146
301 Ga0500639_115489 3300053163 Bacteria 1298
302 Ga0500636_0023510 3300053177 Bacteria 3643
303 Ga0500636_0115791 3300053177 Bacteria 1509
304 Ga0500637_0000394 3300053178 Bacteria 16665
305 Ga0500576_069724 3300053725 Bacteria 1514
306 Ga0501084_0007363 3300054114 Bacteria 9067
307 Ga0501082_0002053 3300060353 Bacteria 17707

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048908 Ga0496105_0174961 Ga0496105_0174961_335_1105 207
2 3300046522 Ga0495643_0062263 Ga0495643_0062263_958_1701 208
3 3300005577 Ga0068857_100249700 Ga0068857_1002497002 213
4 3300009098 Ga0105245_10181605 Ga0105245_101816053 213
5 3300009176 Ga0105242_10326611 Ga0105242_103266112 213
6 3300025934 Ga0207686_10087920 Ga0207686_100879203 213
7 3300026116 Ga0207674_10264782 Ga0207674_102647822 213
8 3300005436 Ga0070713_100478874 Ga0070713_1004788742 214
9 3300006163 Ga0070715_10004289 Ga0070715_100042895 214
10 3300025905 Ga0207685_10005731 Ga0207685_100057313 214
11 3300048903 Ga0496100_0075988 Ga0496100_0075988_1038_1832 214
12 3300048904 Ga0496101_0103979 Ga0496101_0103979_878_1672 214
13 3300048905 Ga0496102_0011643 Ga0496102_0011643_6560_7354 214
14 3300048906 Ga0496103_0101539 Ga0496103_0101539_503_1297 214
15 3300048907 Ga0496104_0067455 Ga0496104_0067455_1285_2079 214
16 3300048909 Ga0496106_0195361 Ga0496106_0195361_149_943 214
17 3300048910 Ga0496107_0035517 Ga0496107_0035517_632_1426 214
18 3300048911 Ga0496108_0043311 Ga0496108_0043311_468_1262 214
19 3300048912 Ga0496109_0046982 Ga0496109_0046982_763_1557 214
20 3300048914 Ga0496111_0014045 Ga0496111_0014045_1336_2130 214
21 3300048916 Ga0496113_0182778 Ga0496113_0182778_586_1380 214
22 3300048917 Ga0496114_0006550 Ga0496114_0006550_5982_6776 214
23 3300048918 Ga0496115_0062268 Ga0496115_0062268_638_1432 214
24 3300032133 Ga0316583_10000766 Ga0316583_100007665 216
25 3300049583 Ga0501067_0067219 Ga0501067_0067219_1093_1776 227
26 3300049588 Ga0501072_0001474 Ga0501072_0001474_497_1180 227
27 3300049589 Ga0501073_0003221 Ga0501073_0003221_6863_7546 227
28 3300049590 Ga0501074_0010203 Ga0501074_0010203_3272_3955 227
29 3300049742 Ga0501080_0180549 Ga0501080_0180549_908_1591 227
30 3300049744 Ga0501083_0002355 Ga0501083_0002355_10372_11055 227
31 3300054114 Ga0501084_0007363 Ga0501084_0007363_5368_6051 227
32 3300060353 Ga0501082_0002053 Ga0501082_0002053_346_1029 227
33 3300031727 Ga0316576_10024287 Ga0316576_100242874 230
34 3300031733 Ga0316577_10020693 Ga0316577_100206933 230
35 3300048909 Ga0496106_0294461 Ga0496106_0294461_212_1006 230
36 3300021384 Ga0213876_10022509 Ga0213876_100225094 240
37 3300046557 Ga0495622_0261101 Ga0495622_0261101_22_750 240
38 3300037418 Ga0395900_0040527 Ga0395900_0040527_1156_1953 245
39 3300037471 Ga0395905_0000099 Ga0395905_0000099_105610_106407 245
40 3300025927 Ga0207687_10035593 Ga0207687_100355933 246
41 3300035691 Ga0373931_0030748 Ga0373931_0030748_926_1672 248
42 3300005355 Ga0070671_100590154 Ga0070671_1005901541 249
43 3300005364 Ga0070673_100316283 Ga0070673_1003162832 249
44 3300005539 Ga0068853_100158940 Ga0068853_1001589402 249
45 3300005618 Ga0068864_100005595 Ga0068864_1000055956 249
46 3300005841 Ga0068863_100026574 Ga0068863_1000265745 249
47 3300006237 Ga0097621_100343991 Ga0097621_1003439912 249
48 3300009177 Ga0105248_10141114 Ga0105248_101411143 249
49 3300009177 Ga0105248_10153355 Ga0105248_101533552 249
50 3300013308 Ga0157375_10041637 Ga0157375_100416375 249
51 3300014325 Ga0163163_10136296 Ga0163163_101362963 249
52 3300014968 Ga0157379_10480158 Ga0157379_104801582 249
53 3300025931 Ga0207644_10288984 Ga0207644_102889842 249
54 3300025945 Ga0207679_10263440 Ga0207679_102634402 249
55 3300025960 Ga0207651_10292472 Ga0207651_102924722 249
56 3300026121 Ga0207683_10097502 Ga0207683_100975023 249
57 3300033180 Ga0307510_10030990 Ga0307510_100309905 249
58 3300039438 Ga0436360_0494232 Ga0436360_0494232_590_1339 249
59 3300048904 Ga0496101_0049628 Ga0496101_0049628_739_1488 249
60 3300048905 Ga0496102_0058311 Ga0496102_0058311_349_1098 249
61 3300048912 Ga0496109_0016694 Ga0496109_0016694_3602_4351 249
62 3300048913 Ga0496110_0054000 Ga0496110_0054000_2607_3356 249
63 3300048915 Ga0496112_0096168 Ga0496112_0096168_1364_2113 249
64 3300048916 Ga0496113_0680491 Ga0496113_0680491_31_780 249
65 3300049579 Ga0501043_0035941 Ga0501043_0035941_1767_2516 249
66 3300005341 Ga0070691_10064495 Ga0070691_100644951 250
67 3300005355 Ga0070671_100206029 Ga0070671_1002060292 250
68 3300005366 Ga0070659_100001070 Ga0070659_1000010704 250
69 3300005366 Ga0070659_100019505 Ga0070659_1000195055 250
70 3300005458 Ga0070681_10042995 Ga0070681_100429954 250
71 3300005458 Ga0070681_10049021 Ga0070681_100490213 250
72 3300005548 Ga0070665_100000505 Ga0070665_10000050520 250
73 3300005563 Ga0068855_100011305 Ga0068855_1000113052 250
74 3300005616 Ga0068852_100773775 Ga0068852_1007737752 250
75 3300006028 Ga0070717_10167774 Ga0070717_101677742 250
76 3300009093 Ga0105240_10001973 Ga0105240_1000197314 250
77 3300009093 Ga0105240_10015918 Ga0105240_100159188 250
78 3300009093 Ga0105240_10115251 Ga0105240_101152512 250
79 3300009093 Ga0105240_10123889 Ga0105240_101238894 250
80 3300009093 Ga0105240_10205545 Ga0105240_102055452 250
81 3300009177 Ga0105248_10001756 Ga0105248_100017567 250
82 3300013104 Ga0157370_10277731 Ga0157370_102777312 250
83 3300025909 Ga0207705_10088893 Ga0207705_100888932 250
84 3300025912 Ga0207707_10200885 Ga0207707_102008852 250
85 3300025913 Ga0207695_10009941 Ga0207695_100099416 250
86 3300025913 Ga0207695_10025766 Ga0207695_100257662 250
87 3300025913 Ga0207695_10035322 Ga0207695_100353225 250
88 3300025913 Ga0207695_10088093 Ga0207695_100880933 250
89 3300025917 Ga0207660_10180268 Ga0207660_101802682 250
90 3300025919 Ga0207657_10006066 Ga0207657_100060666 250
91 3300025919 Ga0207657_10013197 Ga0207657_100131975 250
92 3300025919 Ga0207657_10179837 Ga0207657_101798374 250
93 3300025921 Ga0207652_10022045 Ga0207652_100220452 250
94 3300025924 Ga0207694_10169128 Ga0207694_101691282 250
95 3300025932 Ga0207690_10000053 Ga0207690_1000005326 250
96 3300025941 Ga0207711_10000731 Ga0207711_100007317 250
97 3300025949 Ga0207667_10150870 Ga0207667_101508702 250
98 3300026041 Ga0207639_10104206 Ga0207639_101042062 250
99 3300027378 Ga0209981_1009166 Ga0209981_10091662 250
100 3300027543 Ga0209999_1002680 Ga0209999_10026803 250
101 3300028379 Ga0268266_10000355 Ga0268266_1000035534 250
102 3300028786 Ga0307517_10003553 Ga0307517_100035532 250
103 3300028786 Ga0307517_10185071 Ga0307517_101850712 250
104 3300031456 Ga0307513_10002479 Ga0307513_1000247930 250
105 3300031456 Ga0307513_10010652 Ga0307513_100106523 250
106 3300035113 Ga0373936_0003064 Ga0373936_0003064_2283_3035 250
107 3300046506 Ga0495583_0045273 Ga0495583_0045273_687_1439 250
108 3300046616 Ga0495668_0074009 Ga0495668_0074009_972_1724 250
109 3300046648 Ga0495611_0046090 Ga0495611_0046090_1192_1944 250
110 3300047320 Ga0495672_0082796 Ga0495672_0082796_979_1731 250
111 3300048915 Ga0496112_0099654 Ga0496112_0099654_1090_1842 250
112 3300048918 Ga0496115_0001485 Ga0496115_0001485_4161_4913 250
113 3300048918 Ga0496115_0054161 Ga0496115_0054161_934_1686 250
114 3300049822 Ga0501035_0059136 Ga0501035_0059136_2149_2901 250
115 iso_pu_bacteria 2510917020 2511123794 250
116 iso_pu_bacteria 2643221545 2643750856 250
117 iso_pu_bacteria 2643221583 2643925720 250
118 iso_pu_bacteria 2643221691 2644509930 250
119 3300009093 Ga0105240_10001441 Ga0105240_100014417 251
120 3300009176 Ga0105242_10362706 Ga0105242_103627062 251
121 3300025913 Ga0207695_10017816 Ga0207695_100178164 251
122 3300035695 Ga0373927_0009043 Ga0373927_0009043_495_1256 251
123 3300037068 Ga0373925_0000061 Ga0373925_0000061_102238_102999 251
124 3300037312 Ga0395899_0014636 Ga0395899_0014636_4506_5285 251
125 3300037418 Ga0395900_0000009 Ga0395900_0000009_409083_409862 251
126 3300037466 Ga0395898_0012203 Ga0395898_0012203_4042_4821 251
127 3300038443 Ga0395901_0000014 Ga0395901_0000014_360289_361068 251
128 3300046528 Ga0495642_0001550 Ga0495642_0001550_7694_8449 251
129 3300053096 Ga0500641_0063181 Ga0500641_0063181_493_1251 251
130 3300053108 Ga0500562_001209 Ga0500562_001209_1259_2017 251
131 iso_pu_bacteria 2643221614 2644088492 251
132 iso_pu_bacteria 2643221661 2644343728 251
133 iso_pu_bacteria 2643221666 2644368794 251
134 3300025941 Ga0207711_10060305 Ga0207711_100603054 252
135 3300037471 Ga0395905_0000521 Ga0395905_0000521_4805_5581 252
136 iso_pu_bacteria 2582581280 2585150389 252
137 iso_pu_bacteria 2582581293 2585198687 252
138 iso_pu_bacteria 2643221584 2643927519 252
139 iso_pu_bacteria 2818991435 2819539473 252
140 iso_pu_bacteria 2818991454 2819649255 252
141 3300003322 rootL2_10106415 rootL2_101064153 253
142 3300003323 rootH1_10141047 rootH1_101410473 253
143 3300005331 Ga0070670_100000007 Ga0070670_100000007304 253
144 3300005347 Ga0070668_100007108 Ga0070668_1000071088 253
145 3300005347 Ga0070668_100015922 Ga0070668_1000159225 253
146 3300005367 Ga0070667_100000560 Ga0070667_10000056037 253
147 3300005367 Ga0070667_100001821 Ga0070667_10000182120 253
148 3300005548 Ga0070665_100002342 Ga0070665_10000234217 253
149 3300005548 Ga0070665_100004010 Ga0070665_10000401013 253
150 3300005618 Ga0068864_100000095 Ga0068864_10000009548 253
151 3300005841 Ga0068863_100004340 Ga0068863_10000434015 253
152 3300005842 Ga0068858_100062375 Ga0068858_1000623755 253
153 3300005843 Ga0068860_100000204 Ga0068860_10000020461 253
154 3300005844 Ga0068862_100001773 Ga0068862_10000177319 253
155 3300005844 Ga0068862_100043901 Ga0068862_1000439014 253
156 3300006881 Ga0068865_100001450 Ga0068865_1000014503 253
157 3300009177 Ga0105248_10008322 Ga0105248_100083225 253
158 3300009177 Ga0105248_10120009 Ga0105248_101200093 253
159 3300009177 Ga0105248_10859424 Ga0105248_108594242 253
160 3300009553 Ga0105249_10006260 Ga0105249_100062606 253
161 3300013105 Ga0157369_10607839 Ga0157369_106078391 253
162 3300013306 Ga0163162_10047044 Ga0163162_100470444 253
163 3300014325 Ga0163163_10787724 Ga0163163_107877242 253
164 3300014968 Ga0157379_10003498 Ga0157379_1000349810 253
165 3300015684 Ga0183365_10006 Ga0183365_1000689 253
166 3300025925 Ga0207650_10000030 Ga0207650_1000003048 253
167 3300025938 Ga0207704_10059991 Ga0207704_100599912 253
168 3300025941 Ga0207711_10064173 Ga0207711_100641732 253
169 3300025941 Ga0207711_10341517 Ga0207711_103415172 253
170 3300025961 Ga0207712_10002455 Ga0207712_100024558 253
171 3300025972 Ga0207668_10000010 Ga0207668_10000010124 253
172 3300025972 Ga0207668_10000152 Ga0207668_1000015248 253
173 3300025986 Ga0207658_10000935 Ga0207658_1000093513 253
174 3300025986 Ga0207658_10001721 Ga0207658_100017213 253
175 3300026035 Ga0207703_10007136 Ga0207703_1000713611 253
176 3300026088 Ga0207641_10011189 Ga0207641_100111899 253
177 3300026088 Ga0207641_10440977 Ga0207641_104409772 253
178 3300026095 Ga0207676_10000095 Ga0207676_1000009548 253
179 3300028379 Ga0268266_10001030 Ga0268266_1000103042 253
180 3300028379 Ga0268266_10007776 Ga0268266_100077767 253
181 3300028380 Ga0268265_10005604 Ga0268265_100056049 253
182 3300028380 Ga0268265_10070025 Ga0268265_100700252 253
183 3300028381 Ga0268264_10000125 Ga0268264_10000125153 253
184 3300048904 Ga0496101_0527659 Ga0496101_0527659_56_829 253
185 3300049571 Ga0501034_0322978 Ga0501034_0322978_266_1027 253
186 3300053087 Ga0500643_022399 Ga0500643_022399_1075_1842 253
187 3300053122 Ga0500608_000131 Ga0500608_000131_28318_29079 253
188 iso_pu_bacteria 2739367756 2739793458 253
189 3300003773 Ga0055537_1007217 Ga0055537_10072173 254
190 3300003775 Ga0055524_1018557 Ga0055524_10185571 254
191 3300003790 Ga0055528_1010921 Ga0055528_10109212 254
192 3300005366 Ga0070659_100346395 Ga0070659_1003463951 254
193 3300005455 Ga0070663_100320844 Ga0070663_1003208441 254
194 3300005614 Ga0068856_100178177 Ga0068856_1001781772 254
195 3300009093 Ga0105240_10239649 Ga0105240_102396492 254
196 3300009545 Ga0105237_10628469 Ga0105237_106284691 254
197 3300021384 Ga0213876_10029381 Ga0213876_100293812 254
198 3300025263 Ga0209565_1000666 Ga0209565_100066621 254
199 3300025273 Ga0209673_1003086 Ga0209673_10030865 254
200 3300025291 Ga0209675_1007246 Ga0209675_10072461 254
201 3300025297 Ga0209758_1006763 Ga0209758_10067638 254
202 3300025299 Ga0209256_1013611 Ga0209256_10136111 254
203 3300025981 Ga0207640_10409620 Ga0207640_104096202 254
204 3300025986 Ga0207658_10013550 Ga0207658_100135506 254
205 3300026078 Ga0207702_10222429 Ga0207702_102224292 254
206 3300026118 Ga0207675_100329360 Ga0207675_1003293602 254
207 3300028794 Ga0307515_10125550 Ga0307515_101255502 254
208 3300031456 Ga0307513_10059650 Ga0307513_100596502 254
209 3300031456 Ga0307513_10382012 Ga0307513_103820122 254
210 3300031730 Ga0307516_10000004 Ga0307516_10000004157 254
211 3300038443 Ga0395901_0106082 Ga0395901_0106082_61_834 254
212 3300039437 Ga0436365_0425324 Ga0436365_0425324_3974_4750 254
213 3300039437 Ga0436365_0587110 Ga0436365_0587110_1252_2016 254
214 3300046453 Ga0495627_000525 Ga0495627_000525_14441_15205 254
215 3300046460 Ga0495638_0064759 Ga0495638_0064759_648_1412 254
216 3300046492 Ga0495585_0062536 Ga0495585_0062536_117_887 254
217 3300046512 Ga0495610_0000056 Ga0495610_0000056_24259_25026 254
218 3300046519 Ga0495632_0065706 Ga0495632_0065706_640_1407 254
219 3300046520 Ga0495637_0018669 Ga0495637_0018669_1414_2181 254
220 3300046660 Ga0495625_0000209 Ga0495625_0000209_17909_18676 254
221 3300046660 Ga0495625_0001345 Ga0495625_0001345_6316_7083 254
222 3300046660 Ga0495625_0001855 Ga0495625_0001855_21969_22736 254
223 3300046660 Ga0495625_0139122 Ga0495625_0139122_527_1309 254
224 3300046684 Ga0495669_0000054 Ga0495669_0000054_39943_40725 254
225 3300046684 Ga0495669_0003945 Ga0495669_0003945_5227_6000 254
226 3300046794 Ga0495589_0044486 Ga0495589_0044486_1216_1980 254
227 3300047320 Ga0495672_0002292 Ga0495672_0002292_9314_10081 254
228 3300047445 Ga0495677_0031676 Ga0495677_0031676_816_1598 254
229 3300047469 Ga0495673_0000195 Ga0495673_0000195_36618_37382 254
230 3300048909 Ga0496106_0008765 Ga0496106_0008765_1211_1978 254
231 3300048910 Ga0496107_0000675 Ga0496107_0000675_10834_11601 254
232 3300048924 Ga0496121_0009556 Ga0496121_0009556_2634_3401 254
233 3300049581 Ga0501047_0003112 Ga0501047_0003112_9154_9924 254
234 3300053102 Ga0500554_001536 Ga0500554_001536_3490_4257 254
235 3300053104 Ga0500556_0000307 Ga0500556_0000307_17740_18507 254
236 3300053142 Ga0500577_0000339 Ga0500577_0000339_5859_6623 254
237 3300053153 Ga0500616_0026698 Ga0500616_0026698_1768_2532 254
238 3300053156 Ga0500622_0018678 Ga0500622_0018678_2630_3397 254
239 3300053163 Ga0500639_115489 Ga0500639_115489_415_1188 254
240 3300005331 Ga0070670_100073570 Ga0070670_1000735703 255
241 3300005539 Ga0068853_100163786 Ga0068853_1001637861 255
242 3300005618 Ga0068864_100000093 Ga0068864_10000009358 255
243 3300005841 Ga0068863_100000045 Ga0068863_10000004567 255
244 3300005842 Ga0068858_100000144 Ga0068858_10000014466 255
245 3300009177 Ga0105248_10000957 Ga0105248_1000095726 255
246 3300025925 Ga0207650_10055699 Ga0207650_100556992 255
247 3300025941 Ga0207711_10001523 Ga0207711_1000152313 255
248 3300026035 Ga0207703_10000557 Ga0207703_1000055741 255
249 3300026088 Ga0207641_10000011 Ga0207641_1000001194 255
250 3300026095 Ga0207676_10000114 Ga0207676_1000011462 255
251 3300031616 Ga0307508_10047359 Ga0307508_100473594 255
252 3300041512 Ga0451853_1790198 Ga0451853_1790198_296_1072 255
253 3300046459 Ga0495629_0017022 Ga0495629_0017022_191_970 255
254 3300046506 Ga0495583_0034922 Ga0495583_0034922_177_956 255
255 3300046522 Ga0495643_0043372 Ga0495643_0043372_202_981 255
256 3300046542 Ga0495597_0001492 Ga0495597_0001492_11892_12671 255
257 3300046557 Ga0495622_0032856 Ga0495622_0032856_1414_2193 255
258 3300046616 Ga0495668_0004497 Ga0495668_0004497_3409_4188 255
259 3300046660 Ga0495625_0136165 Ga0495625_0136165_520_1299 255
260 3300047443 Ga0495687_024136 Ga0495687_024136_790_1569 255
261 3300048905 Ga0496102_0320224 Ga0496102_0320224_497_1276 255
262 3300048906 Ga0496103_0156406 Ga0496103_0156406_85_864 255
263 3300048920 Ga0496117_0016423 Ga0496117_0016423_4117_4896 255
264 3300048921 Ga0496118_0012383 Ga0496118_0012383_2819_3598 255
265 3300048922 Ga0496119_0016904 Ga0496119_0016904_4209_4988 255
266 3300048924 Ga0496121_0000442 Ga0496121_0000442_29046_29825 255
267 3300048928 Ga0496125_0338272 Ga0496125_0338272_26_796 255
268 3300053080 Ga0500635_0000125 Ga0500635_0000125_19816_20595 255
269 3300053094 Ga0500566_0026008 Ga0500566_0026008_536_1315 255
270 3300053103 Ga0500555_003254 Ga0500555_003254_553_1332 255
271 3300053104 Ga0500556_0005213 Ga0500556_0005213_684_1463 255
272 3300053121 Ga0500607_161714 Ga0500607_161714_155_934 255
273 3300053122 Ga0500608_013339 Ga0500608_013339_2663_3442 255
274 3300053130 Ga0500642_0050003 Ga0500642_0050003_38_817 255
275 3300053130 Ga0500642_0062012 Ga0500642_0062012_449_1228 255
276 3300053134 Ga0500658_0029721 Ga0500658_0029721_22_801 255
277 3300053148 Ga0500590_151492 Ga0500590_151492_213_992 255
278 3300053150 Ga0500603_010721 Ga0500603_010721_573_1352 255
279 3300053154 Ga0500619_083942 Ga0500619_083942_274_1053 255
280 3300053162 Ga0500638_009920 Ga0500638_009920_963_1742 255
281 3300053177 Ga0500636_0023510 Ga0500636_0023510_1128_1907 255
282 3300053177 Ga0500636_0115791 Ga0500636_0115791_496_1275 255
283 3300053178 Ga0500637_0000394 Ga0500637_0000394_5439_6218 255
284 3300053725 Ga0500576_069724 Ga0500576_069724_282_1061 255
285 3300003316 rootH1_10081331 rootH1_100813312 256
286 3300005334 Ga0068869_100081231 Ga0068869_1000812312 256
287 3300005843 Ga0068860_100000517 Ga0068860_10000051724 256
288 3300006195 Ga0075366_10107548 Ga0075366_101075482 256
289 3300010375 Ga0105239_10438031 Ga0105239_104380313 256
290 3300025295 Ga0209564_1004028 Ga0209564_10040283 256
291 3300025297 Ga0209758_1004460 Ga0209758_10044609 256
292 3300025298 Ga0209050_1021083 Ga0209050_10210834 256
293 3300025299 Ga0209256_1002778 Ga0209256_100277811 256
294 3300025304 Ga0209257_1000538 Ga0209257_100053832 256
295 3300025942 Ga0207689_10060384 Ga0207689_100603844 256
296 3300028380 Ga0268265_10087067 Ga0268265_100870672 256
297 3300028381 Ga0268264_10000416 Ga0268264_1000041646 256
298 3300028800 Ga0265338_10006570 Ga0265338_100065707 256
299 3300028800 Ga0265338_10023802 Ga0265338_100238025 256
300 3300028800 Ga0265338_10256854 Ga0265338_102568542 256
301 3300031247 Ga0265340_10013117 Ga0265340_100131173 256
302 3300031711 Ga0265314_10059780 Ga0265314_100597803 256
303 3300033180 Ga0307510_10266536 Ga0307510_102665361 256
304 3300037418 Ga0395900_0165941 Ga0395900_0165941_163_963 256
305 3300037466 Ga0395898_0030065 Ga0395898_0030065_3790_4590 256
306 3300038443 Ga0395901_0141299 Ga0395901_0141299_468_1268 256
307 3300042436 Ga0439435_0074691 Ga0439435_0074691_86_856 256
308 3300046519 Ga0495632_0001177 Ga0495632_0001177_3185_3955 256
309 3300046519 Ga0495632_0127575 Ga0495632_0127575_47_826 256
310 3300046616 Ga0495668_0053656 Ga0495668_0053656_1337_2107 256
311 3300047470 Ga0495681_0108297 Ga0495681_0108297_264_1043 256
312 3300048929 Ga0496126_0223827 Ga0496126_0223827_791_1561 256
313 3300049571 Ga0501034_0257679 Ga0501034_0257679_632_1474 256
314 3300049586 Ga0501070_0209787 Ga0501070_0209787_110_952 256
315 3300049822 Ga0501035_0277331 Ga0501035_0277331_56_898 256
316 3300049823 Ga0501044_0260351 Ga0501044_0260351_752_1594 256
317 3300050493 nmdc:mga0k408_40753_c1 nmdc:mga0k408_40753_c1_1447_2229 256
318 3300050496 nmdc:mga07m45_47313_c1 nmdc:mga07m45_47313_c1_1042_1812 256
319 3300053087 Ga0500643_004111 Ga0500643_004111_5475_6248 256
320 3300053156 Ga0500622_0003336 Ga0500622_0003336_9947_10729 256

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01479

S4

S4 domain

13

59

0.91

PF00849

PseudoU_synth_2

RNA pseudouridylate synthase

74

213

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
7pic-assembly1.cif.gz_C 70s ribosome with p/e-site trna in spectinomycin-treated mycoplasma pneumoniae cells 0.8867 14 64
4v73-assembly1.cif.gz_AD e. coli 70s-fmetval-trnaval-trnafmet complex in hybrid pre-translocation state (pre5a) 0.8838 14 66
5mmm-assembly1.cif.gz_d structure of the 70s chloroplast ribosome 0.8777 14 67
5xyu-assembly1.cif.gz_D small subunit of mycobacterium smegmatis ribosome 0.8668 14 63
7nhk-assembly1.cif.gz_e lsaa, an antibiotic resistance abcf, in complex with 70s ribosome from enterococcus faecalis 0.8562 13 66
ID Description Score Start End Superfamily
af_Q2FY78_132_218_3.30.70.1560 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Alpha-L RNA-binding motif 0.9544 152 230 3.30.70.1560
af_P75966_105_205_3.30.70.1560 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Alpha-L RNA-binding motif 0.9496 152 231 3.30.70.1560
af_Q9XPI8_145_195_3.10.290.10 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.9412 14 59 3.10.290.10
3dh3B02 Alpha Beta;2-Layer Sandwich;Pseudouridine synthase;Pseudouridine synthase 0.9349 70 251 3.30.2350.10
af_P0AAS7_1_70_3.10.290.10 Alpha Beta;Roll;Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A;RNA-binding S4 domain 0.934 12 61 3.10.290.10
ID Description Score Start End GO Terms
AF-A0A059FFU3-F1-model_v4 Dual-specificity RNA pseudouridine synthase RluF (EC 5.4.99.21) (23S rRNA pseudouridine(2604) synthase) (RNA pseudouridylate synthase) (RNA-uridine isomerase) (Ribosomal large subunit pseudouridine synthase F) (rRNA pseudouridylate synthase F) (rRNA-uridine isomerase F) (tRNA(Tyr) pseudouridine(35) synthase) 0.9961 1 251 GO:0000455
GO:0003723
GO:0120159
AF-A0A259IBV9-F1-model_v4 deleted 0.9925 118 251
AF-A0A062ULH8-F1-model_v4 Dual-specificity RNA pseudouridine synthase RluF (EC 5.4.99.21) (23S rRNA pseudouridine(2604) synthase) (RNA pseudouridylate synthase) (RNA-uridine isomerase) (Ribosomal large subunit pseudouridine synthase F) (rRNA pseudouridylate synthase F) (rRNA-uridine isomerase F) (tRNA(Tyr) pseudouridine(35) synthase) 0.9923 1 251 GO:0000455
GO:0003723
GO:0120159
AF-A0A4Q3CH03-F1-model_v4 Dual-specificity RNA pseudouridine synthase RluF (EC 5.4.99.21) (23S rRNA pseudouridine(2604) synthase) (RNA pseudouridylate synthase) (RNA-uridine isomerase) (Ribosomal large subunit pseudouridine synthase F) (rRNA pseudouridylate synthase F) (rRNA-uridine isomerase F) (tRNA(Tyr) pseudouridine(35) synthase) 0.9919 1 251 GO:0000455
GO:0003723
GO:0120159
AF-A0A4P1K7C8-F1-model_v4 Ribosomal large subunit pseudouridine synthase F (EC 5.4.99.21) 0.9902 134 251 GO:0001522
GO:0003723
GO:0006396
GO:0160138

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pLDDT pTM Quality
93.26 0.87 High
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