F405335

General Info

Members Datasets Scaffolds Average Seq Length
319 243 638 226

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2889049205|2889055753
Length 220
Sequence ELNAFAVREIRNNYYLTGQVKSLSTRDLIVLLMEPVTSSRSLSLLADELLQHGLRDLSELSEYELSFRYGLDERQSFFLASLLELGRRQYFSRKEDRVIIRSAGDVADLMMDMCFLEKEHFVCLFLDTKNHVIAKETISIGTLDAALVHPREVFRAAIRHGSSTIVAVHNHPSGIPTPSQEDIHLTKRLCEAGELVGIGLSDHIIIGDRVHSSLRELGHF

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
6 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
9 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
10 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
13 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
14 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
15 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
16 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
17 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
18 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
19 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
20 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
21 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
22 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
23 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
24 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
25 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
26 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
27 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
29 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
30 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
32 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
33 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300030083 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JPPOOL-T1 Metagenome Unclassified
39 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
40 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
41 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
42 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
43 3300038705 Coralloid root microbial communities from Raymundo Flores, Chiapas, Mexico - RF1-T1 Metagenome Unclassified
44 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
45 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
46 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
47 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
48 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
49 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
50 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
51 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
52 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
53 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
54 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
55 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
56 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
57 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
58 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
59 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
60 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
61 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
62 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
63 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
64 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
65 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
66 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
67 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
68 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
71 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
72 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
73 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
74 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
75 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
76 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
77 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
78 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
79 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
80 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
81 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
82 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
83 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
84 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
85 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
86 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
87 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
88 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
89 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
90 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
91 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
92 3300049127 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300049132 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300049531 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300049551 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300049552 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_A_7_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300049553 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_A_7_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
102 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
103 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
106 2889049205 Paenibacillus rhizovicinus 14171R-81 Isolate Rhizosphere
107 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
108 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
109 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
110 2524023129 Paenibacillus pinihumi DSM 23905 Isolate Rhizosphere
111 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
112 2551306519 Bacillus sp. WBUNB004 Isolate Rhizosphere
113 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
114 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
115 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
116 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
117 2585428059 Paenibacillus chondroitinus OK414 Isolate Rhizosphere
118 2593339131 Bacillus sp. UNCCL81 Isolate Unclassified
119 2593339198 Paenibacillus sp. UNCCL117 Isolate Unclassified
120 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
121 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
122 2643221543 Paenibacillus sp. Root52 Isolate Unclassified
123 2643221676 Paenibacillus sp. Root444D2 Isolate Unclassified
124 2643221729 Bacillus sp. Root11 Isolate Unclassified
125 2643221730 Bacillus sp. Root131 Isolate Unclassified
126 2643221731 Bacillus sp. Root147 Isolate Unclassified
127 2643221732 Bacillus sp. Root239 Isolate Unclassified
128 2671180330 Peribacillus simplex SH-B26 Isolate Unclassified
129 2671180694 Paenibacillus sp. A3 Isolate Unclassified
130 2684622632 Bacillus cereus 905 Isolate Unclassified
131 2695420987 Bacillus thuringiensis KNU-07 Isolate Unclassified
132 2703719227 Bacillus mycoides GOE6 Isolate Rhizosphere
133 2718218445 Bacillus sp. B25(2016b) Isolate Rhizosphere
134 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
135 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
136 2728369359 Paenibacillus polymyxa YC0136 Isolate Rhizosphere
137 2738541295 Bacillus sp. OK085 Isolate Unclassified
138 2738541358 Bacillus sp. OV752 Isolate Unclassified
139 2738543017 Bacillus sp. OV186 Isolate Unclassified
140 2744054657 Brevibacillus sp. SKDU10 Isolate Unclassified
141 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
142 2757320391 Bacillus sp. NFR08 Isolate Rhizoplane
143 2775507177 Bacillus sp. AFS055030 Isolate Unclassified
144 2775507192 Bacillus sp. AFS041924 Isolate Unclassified
145 2791355222 Paenibacillus oryzae 1DrF-4 Isolate Unclassified
146 2802428803 Paenibacillus peoriae NMA1017 Isolate Rhizosphere
147 2808606364 Bacillus sp. SLBN-3 Isolate Unclassified
148 2816332186 Peribacillus frigoritolerans 3612 Isolate Unclassified
149 2816332295 Bacillus paralicheniformis MDJK30 Isolate Rhizosphere
150 2816332336 Brevibacillus laterosporus ZQ2 Isolate Unclassified
151 2818991441 Niallia circulans 3243 Isolate Rhizosphere
152 2818991443 Bacillus thuringiensis 1230 Isolate Unclassified
153 2818991459 Paenibacillus sp. 597 Isolate Unclassified
154 2818991465 Priestia megaterium 3291 Isolate Rhizosphere
155 2821111986 Paenibacillus illinoisensis 582 Isolate Unclassified
156 2842682962 Bacillus sp. R-72492 Isolate Unclassified
157 2842882022 Bacillus sp. R-71893 Isolate Unclassified
158 2849139964 Bacillus sp. R-71875 Isolate Unclassified
159 2857453340 Paenibacillus sp. R-74130 Isolate Unclassified
160 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
161 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
162 2857472729 Cohnella sp. R-74144 Isolate Unclassified
163 2857581216 Bacillus sp. R-71922 Isolate Unclassified
164 2857586860 Bacillus sp. R-71935 Isolate Unclassified
165 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
166 2864733723 Paenibacillus sp. JGP012 Isolate Rhizosphere
167 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
168 2865002811 Paenibacillus sp. R-74131 Isolate Unclassified
169 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
170 2881644220 Siminovitchia terrae LMG 29736 Isolate Rhizosphere
171 2885526491 Paenibacillus sp. LK1 Isolate Rhizosphere
172 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
173 2889042446 Paenibacillus sp. 37 Isolate Rhizosphere
174 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
175 2889295896 Paenibacillus sp. PvR098 Isolate Rhizosphere
176 2898907183 Brevibacillus sp. SYP-B805 Isolate Rhizosphere
177 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
178 2904490793 Paenibacillus sp. 1295 Isolate Rhizosphere
179 2904524088 Priestia megaterium 1428 Isolate Rhizosphere
180 2904595352 Paenibacillus sp. 1182 Isolate Unclassified
181 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
182 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
183 2919143609 Priestia megaterium 1751 Isolate Rhizosphere
184 2919160200 Paenibacillus sp. 2003 Isolate Unclassified
185 2919414237 Neobacillus niacini 3240 Isolate Rhizosphere
186 2919425241 Bacillus sp. 3255 Isolate Rhizosphere
187 2919517244 Priestia aryabhattai 3820 Isolate Unclassified
188 2919720352 Priestia megaterium 4340 Isolate Unclassified
189 2925326138 Paenibacillus hemerocallicola KCTC 33185 Isolate Unclassified
190 2929004312 Priestia megaterium 1104 Isolate Unclassified
191 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
192 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
193 2929233124 Bacillus sp. R-74298 Hybrid assembly Isolate Unclassified
194 2931384279 Paenibacillus sp. DR312 Isolate Rhizosphere
195 2936340661 Gottfriedia acidiceleris 1-17 Isolate Rhizosphere
196 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
197 2938917290 Bacillus sp. CR71 Isolate Unclassified
198 2939679117 Paenibacillus sp. 4624 Isolate Rhizosphere
199 2939702853 Paenibacillus sp. PvR008 Isolate Rhizosphere
200 2945991243 Paenibacillus sp. B21a W2I17 Isolate Rhizosphere
201 2946053406 Paenibacillus sp. W4I10 Isolate Rhizosphere
202 2947426588 Bacillus sp. RZ2MS9 Isolate Rhizosphere
203 2956897341 Ectobacillus funiculus W18-2 Isolate Rhizosphere
204 2960319331 Priestia megaterium AFS057444 Isolate Unclassified
205 2960375949 Priestia megaterium AFS067084 Isolate Unclassified
206 2965761152 Bacillus sp. COPE52 Isolate Unclassified
207 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
208 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
209 2971410472 Paenibacillus oryzisoli 1ZS3-15 Isolate Unclassified
210 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
211 2979083700 Bacillus toyonensis SORGH_AS 407 Isolate Unclassified
212 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
213 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
214 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
215 2981284811 Paenibacillus sp. PvR052 Isolate Rhizosphere
216 2981289755 Paenibacillus sp. PvR148 Isolate Rhizosphere
217 2981980479 Paenibacillus sp. PvR018 Isolate Rhizosphere
218 2981985349 Paenibacillus sp. PvR053 Isolate Rhizosphere
219 2984527788 Paenibacillus sp. SORGH_AS306 Isolate Aerial Root
220 2984532647 Paenibacillus sp. SORGH_AS338 Isolate Aerial Root
221 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
222 2990275345 Bacillus sp. SLBN-46 Isolate Unclassified
223 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
224 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere
225 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
226 3006858327 Bacillus paralicheniformis SUBG0010 Isolate Unclassified
227 3006969106 Bacillus sp. FJAT-50079 Isolate Rhizosphere
228 3006973921 Bacillus sp. FJAT-49736 Isolate Rhizosphere
229 3006978542 Bacillus sp. FJAT-49705 Isolate Rhizosphere
230 648028048 Paenibacillus polymyxa E681 Isolate Rhizosphere
231 8022621104 Bacillus sp. PIC28 Isolate Rhizosphere
232 8022792930 Bacillus sp. Xin Isolate Rhizosphere
233 8022914991 Bacillus aryabhattai SQU-R12 Isolate Unclassified
234 8022948649 Bacillus endophyticus FH5 Isolate Rhizosphere
235 8023438354 Bacillus sp. BH2 Isolate Unclassified
236 8023444577 Bacillus sp. BH32 Isolate Unclassified
237 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere
238 8054795415 Paenibacillus periandrae PM10 Isolate Nodule
239 8055632911 Paenibacillus radicibacter N1-5-1-14 Isolate Unclassified
240 8056533031 Paenibacillus qinlingensis TEGT-2 Isolate Unclassified
241 8057582654 Bacillus arachidis YX15 Isolate Rhizosphere
242 8057733483 Paenibacillus apiarius MW-14 Isolate Rhizosphere
243 8057977335 Paenibacillus oenotherae DT7-4 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 52.04
Metatranscriptomes 4.39
Isolates 43.57

Biome Distribution

Category Percentage (%)
Aerial Root 0.63
Bulb 0
Endosphere 12.54
Nodule 0.63
Rhizoplane 8.78
Rhizosphere 44.2
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10004195 3300003187 Bacteria 7676
2 JGI25151J46595_10006624 3300003187 Bacteria 5781
3 JGI25151J46595_10007000 3300003187 Bacteria 5583
4 JGI25151J46595_10022863 3300003187 Bacteria 2587
5 JGI25151J46595_10030442 3300003187 Bacteria 2123
6 JGI25151J46595_10045265 3300003187 Bacteria 1555
7 rootH1_10001425 3300003316 Bacteria 61502
8 rootH2_10286694 3300003320 Bacteria 2715
9 rootL2_10002725 3300003322 Bacteria 27980
10 Ga0006562J51391_1000516 3300003578 Bacteria 13475
11 Ga0055532_1000078 3300003758 Bacteria 121493
12 Ga0055532_1005266 3300003758 Bacteria 1836
13 Ga0055532_1008518 3300003758 Bacteria 1277
14 Ga0055535_1002578 3300003761 Bacteria 6104
15 Ga0055536_1026200 3300003781 Bacteria 1640
16 Ga0055528_1003902 3300003790 Bacteria 7329
17 Ga0055541_1000141 3300003841 Bacteria 37253
18 Ga0055541_1008145 3300003841 Bacteria 1683
19 Ga0070670_100291827 3300005331 Bacteria 1425
20 Ga0070670_100386678 3300005331 Bacteria 1233
21 Ga0075364_10149229 3300006051 Bacteria 1575
22 Ga0105251_10014964 3300009011 Bacteria 4259
23 Ga0105251_10026356 3300009011 Bacteria 2960
24 Ga0105251_10186523 3300009011 Bacteria 934
25 Ga0105244_10001849 3300009036 Bacteria 16493
26 Ga0105244_10008379 3300009036 Bacteria 6460
27 Ga0105244_10082986 3300009036 Bacteria 1584
28 Ga0105250_10003175 3300009092 Bacteria 7864
29 Ga0105250_10006612 3300009092 Bacteria 5046
30 Ga0105250_10016808 3300009092 Bacteria 2978
31 Ga0105250_10084743 3300009092 Bacteria 1286
32 Ga0105242_10001406 3300009176 Bacteria 18958
33 Ga0105249_10186532 3300009553 Bacteria 2021
34 Ga0105246_10004391 3300011119 Bacteria 8585
35 Ga0105246_10010125 3300011119 Bacteria 5822
36 Ga0105246_10015093 3300011119 Bacteria 4870
37 Ga0157374_10012273 3300013296 Bacteria 7451
38 Ga0157378_10002060 3300013297 Bacteria 18011
39 Ga0157372_11173303 3300013307 Bacteria 888
40 Ga0157377_10025367 3300014745 Bacteria 3161
41 Ga0157376_10108977 3300014969 Bacteria 2434
42 Ga0209566_100077 3300025225 Bacteria 160414
43 Ga0209566_100420 3300025225 Bacteria 32807
44 Ga0209147_100050 3300025229 Bacteria 274639
45 Ga0209147_100114 3300025229 Bacteria 144205
46 Ga0209147_100282 3300025229 Bacteria 43777
47 Ga0209147_101665 3300025229 Bacteria 7313
48 Ga0209147_107986 3300025229 Bacteria 1342
49 Ga0209437_100672 3300025233 Bacteria 18679
50 Ga0209258_101169 3300025242 Bacteria 10692
51 Ga0209673_1003695 3300025273 Bacteria 8790
52 Ga0209130_1002087 3300025284 Bacteria 10753
53 Ga0209130_1006984 3300025284 Bacteria 3563
54 Ga0209676_1004439 3300025292 Bacteria 7826
55 Ga0209676_1022455 3300025292 Bacteria 2090
56 Ga0209025_1000913 3300025294 Bacteria 45495
57 Ga0209025_1001505 3300025294 Bacteria 30006
58 Ga0209025_1002403 3300025294 Bacteria 19974
59 Ga0209025_1003637 3300025294 Bacteria 14318
60 Ga0209025_1003708 3300025294 Bacteria 14042
61 Ga0209025_1014737 3300025294 Bacteria 4778
62 Ga0209025_1021757 3300025294 Bacteria 3435
63 Ga0209025_1030445 3300025294 Bacteria 2584
64 Ga0209025_1040051 3300025294 Bacteria 2033
65 Ga0207426_1014458 3300025302 Bacteria 2890
66 Ga0207696_1001287 3300025711 Bacteria 13980
67 Ga0207696_1002712 3300025711 Bacteria 8470
68 Ga0207696_1003700 3300025711 Bacteria 6862
69 Ga0207655_1003816 3300025728 Bacteria 10991
70 Ga0207655_1032263 3300025728 Bacteria 2396
71 Ga0207713_1001391 3300025735 Bacteria 19598
72 Ga0207713_1009082 3300025735 Bacteria 5646
73 Ga0207713_1058580 3300025735 Bacteria 1483
74 Ga0207644_10013742 3300025931 Bacteria 5405
75 Ga0207712_10301265 3300025961 Bacteria 1315
76 Ga0237817_10105 3300030083 Bacteria 25849
77 Ga0237817_10111 3300030083 Bacteria 25036
78 Ga0307408_100043819 3300031548 Bacteria 3185
79 Ga0307410_10680023 3300031852 Bacteria 866
80 Ga0307416_101040687 3300032002 Bacteria 922
81 Ga0395901_0511119 3300038443 Bacteria 1222
82 Ga0237819_00712 3300038705 Bacteria 10758
83 Ga0237819_00947 3300038705 Bacteria 8855
84 Ga0439439_0001810 3300041406 Bacteria 4373
85 Ga0439433_0009363 3300041999 Bacteria 2131
86 Ga0439449_0005911 3300042007 Bacteria 4676
87 Ga0439449_0090683 3300042007 Bacteria 1128
88 Ga0439457_030055 3300042014 Bacteria 1204
89 Ga0439462_0030128 3300042015 Bacteria 1435
90 Ga0466969_0003060 3300044656 Bacteria 8917
91 Ga0466961_0066013 3300044693 Bacteria 2299
92 Ga0466970_0268516 3300044765 Bacteria 958
93 Ga0466959_0023637 3300045049 Bacteria 4549
94 Ga0466967_0000050 3300045976 Bacteria 42514
95 Ga0495627_060911 3300046453 Bacteria 1117
96 Ga0495590_0025347 3300046457 Bacteria 2085
97 Ga0495591_046637 3300046458 Bacteria 1203
98 Ga0495584_0227817 3300046491 Bacteria 947
99 Ga0495585_0009709 3300046492 Bacteria 5760
100 Ga0495597_0124952 3300046542 Bacteria 1070
101 Ga0495622_0022874 3300046557 Bacteria 2913
102 Ga0495633_0051944 3300046558 Bacteria 1931
103 Ga0495661_0061468 3300046665 Bacteria 2230
104 Ga0495660_0019628 3300046810 Bacteria 3880
105 Ga0495676_0481021 3300047321 Bacteria 817
106 Ga0495683_0005150 3300047323 Bacteria 7283
107 Ga0495626_0022455 3300048091 Bacteria 3116
108 Ga0496100_0013719 3300048903 Bacteria 4684
109 Ga0496101_0003893 3300048904 Bacteria 9330
110 Ga0496102_0002487 3300048905 Bacteria 15734
111 Ga0496102_0055274 3300048905 Bacteria 3620
112 Ga0496103_0005620 3300048906 Bacteria 7494
113 Ga0496103_0040716 3300048906 Bacteria 2855
114 Ga0496104_0000337 3300048907 Bacteria 41907
115 Ga0496104_0262814 3300048907 Bacteria 1639
116 Ga0496105_0000579 3300048908 Bacteria 24293
117 Ga0496105_0408246 3300048908 Bacteria 1077
118 Ga0496106_0000241 3300048909 Bacteria 37961
119 Ga0496106_0394061 3300048909 Bacteria 1113
120 Ga0496107_0002325 3300048910 Bacteria 12274
121 Ga0496107_0238526 3300048910 Bacteria 1353
122 Ga0496108_0000370 3300048911 Bacteria 37629
123 Ga0496109_0004154 3300048912 Bacteria 12089
124 Ga0496109_0386250 3300048912 Bacteria 1323
125 Ga0496110_0000752 3300048913 Bacteria 22414
126 Ga0496110_0006834 3300048913 Bacteria 9069
127 Ga0496110_0474148 3300048913 Bacteria 1140
128 Ga0496111_0000387 3300048914 Bacteria 22021
129 Ga0496112_0006856 3300048915 Bacteria 10043
130 Ga0496112_0421893 3300048915 Bacteria 1273
131 Ga0496113_0004470 3300048916 Bacteria 8601
132 Ga0496113_0124547 3300048916 Bacteria 2018
133 Ga0496115_0230811 3300048918 Bacteria 1526
134 Ga0496116_0004289 3300048919 Bacteria 13670
135 Ga0496116_0015163 3300048919 Bacteria 6109
136 Ga0496116_0016938 3300048919 Bacteria 5681
137 Ga0496116_0031325 3300048919 Bacteria 3809
138 Ga0496116_0115395 3300048919 Bacteria 1567
139 Ga0496116_0142343 3300048919 Bacteria 1347
140 Ga0496116_0145532 3300048919 Bacteria 1325
141 Ga0496116_0174472 3300048919 Bacteria 1160
142 Ga0496116_0180075 3300048919 Bacteria 1133
143 Ga0496117_0009846 3300048920 Bacteria 8804
144 Ga0496119_0003834 3300048922 Bacteria 15363
145 Ga0496119_0011157 3300048922 Bacteria 7481
146 Ga0496120_0101662 3300048923 Bacteria 1517
147 Ga0496121_0102977 3300048924 Bacteria 2198
148 Ga0496122_0005314 3300048925 Bacteria 15404
149 Ga0496122_0011144 3300048925 Bacteria 9156
150 Ga0496122_0033100 3300048925 Bacteria 4259
151 Ga0496122_0318907 3300048925 Bacteria 828
152 Ga0496123_0004829 3300048926 Bacteria 13901
153 Ga0496123_0017551 3300048926 Bacteria 5751
154 Ga0496124_0002046 3300048927 Bacteria 27402
155 Ga0496124_0034691 3300048927 Bacteria 4423
156 Ga0496124_0099379 3300048927 Bacteria 2360
157 Ga0496125_0000618 3300048928 Bacteria 60027
158 Ga0496125_0001683 3300048928 Bacteria 30939
159 Ga0496125_0003940 3300048928 Bacteria 17517
160 Ga0496125_0009920 3300048928 Bacteria 9683
161 Ga0496126_0002657 3300048929 Bacteria 23682
162 Ga0496126_0011419 3300048929 Bacteria 9199
163 Ga0501306_010015 3300049127 Bacteria 1186
164 Ga0501343_000083 3300049132 Bacteria 4002
165 Ga0501312_000368 3300049528 Bacteria 3459
166 Ga0501312_000895 3300049528 Bacteria 2692
167 Ga0501312_025646 3300049528 Bacteria 899
168 Ga0501312_027607 3300049528 Bacteria 876
169 Ga0501315_004846 3300049531 Bacteria 1430
170 Ga0501316_005763 3300049532 Bacteria 1296
171 Ga0501317_000629 3300049533 Bacteria 2615
172 Ga0501335_001929 3300049551 Bacteria 1646
173 Ga0501335_003084 3300049551 Bacteria 1395
174 Ga0501336_000876 3300049552 Bacteria 1664
175 Ga0501337_000529 3300049553 Bacteria 1898
176 Ga0501071_0956632 3300049587 Bacteria 661
177 Ga0501077_0348672 3300049593 Bacteria 945
178 Ga0501217_037176 3300049661 Bacteria 1225
179 Ga0501045_0690206 3300049824 Bacteria 754
180 nmdc:mga00v17_89885_c1 3300050491 Bacteria 1927
181 2889055753 2889049205 Bacteria 7524325
182 2511178283 2510917027 Bacteria 5287437
183 2512640079 2512564013 Bacteria 6286191
184 2512735491 2512564039 Bacteria 8739048
185 2524186852 2524023129 Bacteria 6762600
186 2550900316 2548877040 Bacteria 7507281
187 2553392929 2551306519 Bacteria 5465154
188 2571531954 2571042143 Bacteria 6986194
189 2573036492 2571042588 Bacteria 5045676
190 2578338192 2576861424 Bacteria 5270569
191 2580933471 2579778775 Bacteria 5360914
192 2587740435 2585428059 Bacteria 8696589
193 2595089890 2593339131 Bacteria 5116855
194 2595318040 2593339198 Bacteria 7267884
195 2601640550 2600255286 Bacteria 5390125
196 2621276608 2619619294 Bacteria 5575484
197 2643738956 2643221543 Bacteria 6628015
198 2644426667 2643221676 Bacteria 8119172
199 2644707913 2643221729 Bacteria 6621700
200 2644714642 2643221730 Bacteria 6523787
201 2644715646 2643221731 Bacteria 5623886
202 2644727365 2643221732 Bacteria 5756404
203 2672337218 2671180330 Bacteria 5521719
204 2673820575 2671180694 Bacteria 7506943
205 2685152428 2684622632 Bacteria 5380049
206 2698320734 2695420987 Bacteria 6152737
207 2705996359 2703719227 Bacteria 5631989
208 2721507586 2718218445 Bacteria 5113413
209 2723605523 2721755693 Bacteria 6126117
210 2728530448 2728368933 Bacteria 7044283
211 2730136210 2728369359 Bacteria 5621728
212 2738814036 2738541295 Bacteria 5730091
213 2739157779 2738541358 Bacteria 5932299
214 2739270834 2738543017 Bacteria 4271950
215 2745169811 2744054657 Bacteria 5016802
216 2753810153 2751185905 Bacteria 6142767
217 2757568221 2757320391 Bacteria 4746095
218 2777760391 2775507177 Bacteria 4384303
219 2777837140 2775507192 Bacteria 4622234
220 2793181891 2791355222 Bacteria 5898266
221 2802438879 2802428803 Bacteria 5806948
222 2808869618 2808606364 Bacteria 4465927
223 2816862356 2816332186 Bacteria 5331395
224 2817481059 2816332295 Bacteria 4352468
225 2817617505 2816332336 Bacteria 5207640
226 2819568628 2818991441 Bacteria 5062707
227 2819583029 2818991443 Bacteria 6598732
228 2819672892 2818991459 Bacteria 8736032
229 2819709115 2818991465 Bacteria 5388835
230 2821117167 2821111986 Bacteria 6894338
231 2842684723 2842682962 Bacteria 5589973
232 2842884640 2842882022 Bacteria 6158489
233 2849142743 2849139964 Bacteria 5613304
234 2857456622 2857453340 Bacteria 8090534
235 2857463397 2857460504 Bacteria 5194327
236 2857468941 2857465823 Bacteria 6772595
237 2857476430 2857472729 Bacteria 6568124
238 2857585540 2857581216 Bacteria 5522813
239 2857591202 2857586860 Bacteria 4354574
240 2857596407 2857591370 Bacteria 6569758
241 2864735433 2864733723 Bacteria 6770668
242 2865002525 2864997549 Bacteria 5139696
243 2865003192 2865002811 Bacteria 6333767
244 2881640372 2881636855 Bacteria 5205297
245 2881645092 2881644220 Bacteria 5302661
246 2885533224 2885526491 Bacteria 7164189
247 2888582931 2888578766 Bacteria 6743310
248 2889047438 2889042446 Bacteria 7618936
249 2889054869 2889049205 Bacteria 7524325
250 2889281498 2889276214 Bacteria 5979355
251 2889300679 2889295896 Bacteria 4704906
252 2898909220 2898907183 Bacteria 4067722
253 2904117334 2904113452 Bacteria 7796941
254 2904495781 2904490793 Bacteria 7046938
255 2904524330 2904524088 Bacteria 5887454
256 2904601123 2904595352 Bacteria 6124848
257 2915600428 2915597211 Bacteria 6475886
258 2915608101 2915606848 Bacteria 6032732
259 2919147093 2919143609 Bacteria 6219228
260 2919164346 2919160200 Bacteria 6929020
261 2919418252 2919414237 Bacteria 5429133
262 2919432073 2919425241 Bacteria 8055701
263 2919518997 2919517244 Bacteria 5858162
264 2919723365 2919720352 Bacteria 5986006
265 2925330792 2925326138 Bacteria 9652120
266 2929006520 2929004312 Bacteria 5678476
267 2929185591 2929183550 Bacteria 6377511
268 2929210907 2929206907 Bacteria 5918291
269 2929238131 2929233124 Bacteria 5948380
270 2931384489 2931384279 Bacteria 7299545
271 2936340786 2936340661 Bacteria 5139038
272 2938653693 2938649242 Bacteria 7118381
273 2938922323 2938917290 Bacteria 5914775
274 2939684725 2939679117 Bacteria 6921672
275 2939704061 2939702853 Bacteria 5139229
276 2945996874 2945991243 Bacteria 7008369
277 2946059548 2946053406 Bacteria 6978655
278 2947431218 2947426588 Bacteria 5357194
279 2956897585 2956897341 Bacteria 5447711
280 2960319727 2960319331 Bacteria 5502575
281 2960381061 2960375949 Bacteria 5361395
282 2965765411 2965761152 Bacteria 5806513
283 2968562447 2968558590 Bacteria 6956864
284 2971409054 2971403814 Bacteria 7370929
285 2971414071 2971410472 Bacteria 8311090
286 2971515817 2971511577 Bacteria 5404012
287 2979088120 2979083700 Bacteria 5894929
288 2980130184 2980125574 Bacteria 5567337
289 2980178336 2980176882 Bacteria 5397533
290 2980185181 2980182181 Bacteria 9454109
291 2981287402 2981284811 Bacteria 4641497
292 2981292598 2981289755 Bacteria 4641509
293 2981983183 2981980479 Bacteria 4641628
294 2981988097 2981985349 Bacteria 4641497
295 2984530726 2984527788 Bacteria 5288478
296 2984536834 2984532647 Bacteria 5288506
297 2988229958 2988225383 Bacteria 7221625
298 2990277299 2990275345 Bacteria 4887158
299 2996637023 2996632988 Bacteria 6921523
300 2996706977 2996706504 Bacteria 5757485
301 3001897611 3001892409 Bacteria 6328293
302 3006861468 3006858327 Bacteria 4317835
303 3006972087 3006969106 Bacteria 4739423
304 3006976100 3006973921 Bacteria 4423788
305 3006982013 3006978542 Bacteria 5328100
306 648171582 648028048 Bacteria 5394884
307 8022624372 8022621104 Bacteria 5241040
308 8022797054 8022792930 Bacteria 5693794
309 8022917494 8022914991 Bacteria 5584517
310 8022949990 8022948649 Bacteria 5366783
311 8023443866 8023438354 Bacteria 5779374
312 8023445327 8023444577 Bacteria 5661597
313 8054470466 8054465665 Bacteria 7323556
314 8054800300 8054795415 Bacteria 9785225
315 8055637599 8055632911 Bacteria 5283357
316 8056539150 8056533031 Bacteria 8964429
317 8057586881 8057582654 Bacteria 5218944
318 8057737274 8057733483 Bacteria 6578323
319 8057977594 8057977335 Bacteria 5694872
320 JGI25151J46595_10004195
321 JGI25151J46595_10006624
322 JGI25151J46595_10007000
323 JGI25151J46595_10022863
324 JGI25151J46595_10030442
325 JGI25151J46595_10045265
326 rootH1_10001425
327 rootH2_10286694
328 rootL2_10002725
329 Ga0006562J51391_1000516
330 Ga0055532_1000078
331 Ga0055532_1005266
332 Ga0055532_1008518
333 Ga0055535_1002578
334 Ga0055536_1026200
335 Ga0055528_1003902
336 Ga0055541_1000141
337 Ga0055541_1008145
338 Ga0070670_100291827
339 Ga0070670_100386678
340 Ga0075364_10149229
341 Ga0105251_10014964
342 Ga0105251_10026356
343 Ga0105251_10186523
344 Ga0105244_10001849
345 Ga0105244_10008379
346 Ga0105244_10082986
347 Ga0105250_10003175
348 Ga0105250_10006612
349 Ga0105250_10016808
350 Ga0105250_10084743
351 Ga0105242_10001406
352 Ga0105249_10186532
353 Ga0105246_10004391
354 Ga0105246_10010125
355 Ga0105246_10015093
356 Ga0157374_10012273
357 Ga0157378_10002060
358 Ga0157372_11173303
359 Ga0157377_10025367
360 Ga0157376_10108977
361 Ga0209566_100077
362 Ga0209566_100420
363 Ga0209147_100050
364 Ga0209147_100114
365 Ga0209147_100282
366 Ga0209147_101665
367 Ga0209147_107986
368 Ga0209437_100672
369 Ga0209258_101169
370 Ga0209673_1003695
371 Ga0209130_1002087
372 Ga0209130_1006984
373 Ga0209676_1004439
374 Ga0209676_1022455
375 Ga0209025_1000913
376 Ga0209025_1001505
377 Ga0209025_1002403
378 Ga0209025_1003637
379 Ga0209025_1003708
380 Ga0209025_1014737
381 Ga0209025_1021757
382 Ga0209025_1030445
383 Ga0209025_1040051
384 Ga0207426_1014458
385 Ga0207696_1001287
386 Ga0207696_1002712
387 Ga0207696_1003700
388 Ga0207655_1003816
389 Ga0207655_1032263
390 Ga0207713_1001391
391 Ga0207713_1009082
392 Ga0207713_1058580
393 Ga0207644_10013742
394 Ga0207712_10301265
395 Ga0237817_10105
396 Ga0237817_10111
397 Ga0307408_100043819
398 Ga0307410_10680023
399 Ga0307416_101040687
400 Ga0395901_0511119
401 Ga0237819_00712
402 Ga0237819_00947
403 Ga0439439_0001810
404 Ga0439433_0009363
405 Ga0439449_0005911
406 Ga0439449_0090683
407 Ga0439457_030055
408 Ga0439462_0030128
409 Ga0466969_0003060
410 Ga0466961_0066013
411 Ga0466970_0268516
412 Ga0466959_0023637
413 Ga0466967_0000050
414 Ga0495627_060911
415 Ga0495590_0025347
416 Ga0495591_046637
417 Ga0495584_0227817
418 Ga0495585_0009709
419 Ga0495597_0124952
420 Ga0495622_0022874
421 Ga0495633_0051944
422 Ga0495661_0061468
423 Ga0495660_0019628
424 Ga0495676_0481021
425 Ga0495683_0005150
426 Ga0495626_0022455
427 Ga0496100_0013719
428 Ga0496101_0003893
429 Ga0496102_0002487
430 Ga0496102_0055274
431 Ga0496103_0005620
432 Ga0496103_0040716
433 Ga0496104_0000337
434 Ga0496104_0262814
435 Ga0496105_0000579
436 Ga0496105_0408246
437 Ga0496106_0000241
438 Ga0496106_0394061
439 Ga0496107_0002325
440 Ga0496107_0238526
441 Ga0496108_0000370
442 Ga0496109_0004154
443 Ga0496109_0386250
444 Ga0496110_0000752
445 Ga0496110_0006834
446 Ga0496110_0474148
447 Ga0496111_0000387
448 Ga0496112_0006856
449 Ga0496112_0421893
450 Ga0496113_0004470
451 Ga0496113_0124547
452 Ga0496115_0230811
453 Ga0496116_0004289
454 Ga0496116_0015163
455 Ga0496116_0016938
456 Ga0496116_0031325
457 Ga0496116_0115395
458 Ga0496116_0142343
459 Ga0496116_0145532
460 Ga0496116_0174472
461 Ga0496116_0180075
462 Ga0496117_0009846
463 Ga0496119_0003834
464 Ga0496119_0011157
465 Ga0496120_0101662
466 Ga0496121_0102977
467 Ga0496122_0005314
468 Ga0496122_0011144
469 Ga0496122_0033100
470 Ga0496122_0318907
471 Ga0496123_0004829
472 Ga0496123_0017551
473 Ga0496124_0002046
474 Ga0496124_0034691
475 Ga0496124_0099379
476 Ga0496125_0000618
477 Ga0496125_0001683
478 Ga0496125_0003940
479 Ga0496125_0009920
480 Ga0496126_0002657
481 Ga0496126_0011419
482 Ga0501306_010015
483 Ga0501343_000083
484 Ga0501312_000368
485 Ga0501312_000895
486 Ga0501312_025646
487 Ga0501312_027607
488 Ga0501315_004846
489 Ga0501316_005763
490 Ga0501317_000629
491 Ga0501335_001929
492 Ga0501335_003084
493 Ga0501336_000876
494 Ga0501337_000529
495 Ga0501071_0956632
496 Ga0501077_0348672
497 Ga0501217_037176
498 Ga0501045_0690206
499 nmdc:mga00v17_89885_c1
500 2889055753
501 2511178283
502 2512640079
503 2512735491
504 2524186852
505 2550900316
506 2553392929
507 2571531954
508 2573036492
509 2578338192
510 2580933471
511 2587740435
512 2595089890
513 2595318040
514 2601640550
515 2621276608
516 2643738956
517 2644426667
518 2644707913
519 2644714642
520 2644715646
521 2644727365
522 2672337218
523 2673820575
524 2685152428
525 2698320734
526 2705996359
527 2721507586
528 2723605523
529 2728530448
530 2730136210
531 2738814036
532 2739157779
533 2739270834
534 2745169811
535 2753810153
536 2757568221
537 2777760391
538 2777837140
539 2793181891
540 2802438879
541 2808869618
542 2816862356
543 2817481059
544 2817617505
545 2819568628
546 2819583029
547 2819672892
548 2819709115
549 2821117167
550 2842684723
551 2842884640
552 2849142743
553 2857456622
554 2857463397
555 2857468941
556 2857476430
557 2857585540
558 2857591202
559 2857596407
560 2864735433
561 2865002525
562 2865003192
563 2881640372
564 2881645092
565 2885533224
566 2888582931
567 2889047438
568 2889054869
569 2889281498
570 2889300679
571 2898909220
572 2904117334
573 2904495781
574 2904524330
575 2904601123
576 2915600428
577 2915608101
578 2919147093
579 2919164346
580 2919418252
581 2919432073
582 2919518997
583 2919723365
584 2925330792
585 2929006520
586 2929185591
587 2929210907
588 2929238131
589 2931384489
590 2936340786
591 2938653693
592 2938922323
593 2939684725
594 2939704061
595 2945996874
596 2946059548
597 2947431218
598 2956897585
599 2960319727
600 2960381061
601 2965765411
602 2968562447
603 2971409054
604 2971414071
605 2971515817
606 2979088120
607 2980130184
608 2980178336
609 2980185181
610 2981287402
611 2981292598
612 2981983183
613 2981988097
614 2984530726
615 2984536834
616 2988229958
617 2990277299
618 2996637023
619 2996706977
620 3001897611
621 3006861468
622 3006972087
623 3006976100
624 3006982013
625 648171582
626 8022624372
627 8022797054
628 8022917494
629 8022949990
630 8023443866
631 8023445327
632 8054470466
633 8054800300
634 8055637599
635 8056539150
636 8057586881
637 8057737274
638 8057977594

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04002

RadC

RadC-like JAB domain

100

219

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
2qlc-assembly5.cif.gz_E the crystal structure of dna repair protein radc from chlorobium tepidum tls 0.9659 106 228
2qlc-assembly5.cif.gz_E the crystal structure of dna repair protein radc from chlorobium tepidum tls 0.9508 106 228
7y0d-assembly1.cif.gz_G cryo-em structure of the mycobacterium smegmatis dna integrity scanning protein (msdisa). 0.8879 51 92
8b0q-assembly1.cif.gz_A deinococcus radiodurans uvrc c-terminal half 0.8624 49 92
4h4n-assembly1.cif.gz_A 1.1 angstrom crystal structure of hypothetical protein ba_2335 from bacillus anthracis 0.8279 127 151
ID Description Score Start End Superfamily
af_P31337_89_213_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9954 103 227 3.40.140.10
af_P31337_89_213_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9876 103 227 3.40.140.10
2qlcA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9606 103 228 3.40.140.10
2qlcA00 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9531 103 228 3.40.140.10
af_P25531_100_221_3.40.140.10 Alpha Beta;3-Layer(aba) Sandwich;Cytidine Deaminase; domain 2;Cytidine Deaminase, domain 2 0.9345 107 226 3.40.140.10
ID Description Score Start End GO Terms
AF-A0A3E0KHN4-F1-model_v4 MPN domain-containing protein 0.8849 3 227 GO:0006508
GO:0008237
GO:0046872
AF-A0A3E0KHN4-F1-model_v4 MPN domain-containing protein 0.8704 3 227 GO:0006508
GO:0008237
GO:0046872
AF-A0A0S6VRA1-F1-model_v4 DNA repair protein RadC 0.819 8 228 GO:0006508
GO:0008237
GO:0046872
AF-A0A090J2T2-F1-model_v4 UPF0758 protein 0.8163 64 228 GO:0003677
GO:0006281
GO:0006508
GO:0008237
GO:0046872
AF-A0A090J2T2-F1-model_v4 UPF0758 protein 0.8069 64 228 GO:0003677
GO:0006281
GO:0006508
GO:0008237
GO:0046872

Map